Cucsa.097490 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.097490
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionBasic helix-loop-helix transcription factor
Locationscaffold00919 : 2696780 .. 2698245 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTGCCATTTCAGAAAGAGAATGGATATCTCTTAGTGGAGCTTATACTGCTGAAGAATCTGATTTTATGGCTAATTTACTCAGCAATTATTGTATTCCTAATGAGTTAAATTCAGATTTAAGCTTGGAAATTCCATCTTCTTATTGGGCTTCTTCTAATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATCTATGCCCTTTCACAACCCAATAACAATCTTCCTTACACTTTCAATGACTCTAACCCCACTCTTTGGTTGCCTAATAATGGTGCTTCCTTGTCCTTGGATTTTTCCATCGAGGATGTCCGGAATGCCGATTGCTTGGACGATAACGGTTCGAATATTCGTAAAACAAGGCAATGCAGCAGGCTGCAACAATCCCCTGCTGACTCTGTTGTCAATGGGAAGAGCTCACAACCGAAACGAAGAGCCAATGATGTGATGGTGGAAGAAGCTATGAGGGATGATAAAGTTGGACCGGTTTCAGTTGAGAATTTCTCGAGGAAGAGACCTCAAAGTTTGCTTGATGTGAGGATTTATAATCTAAGCTTTCATTTGCACTAAAGGCTGCTTGTTTCTTCTCTTTTTCTTTTTtGATTCTAACAACATTGTGGTAATGAAGGTTGAAAAGACAAAAAGGAGCGGGAGGGCACGGAAGACATCGAAGATTGCTTCAGGTAGCTGCAATGAAGAGGATCAAATTGTTAGTCCAAATGGGCAATGCACAAGCAGTTTCAGCTCTGAAGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCACTTCTAGCTCAACCTCAAATGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGGTAATCCTCTAAACTCTAAACCACTCCCCTGTTTCCTCCATTTCCTAACACACTAGTATACTCGAAAATTGAATATATCTGCAAATTCTCATACATTGTGCTATATTTACTAATAATTTTGAATCTGATTGTAAATCTTTTGAATTTTCCTTTCAGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAAGCCTCGTCCCAAATGGTACAAAGGTAAGGTTGATTCTGTACGATATCATACATATATCGAACCATCTCGGTGTTTGAAAGTCTCATATTGTATCTATATCTTAAACCTGACAGGTTGACATCAGTACAATGCTTGAAGAAGCTGTTCAATACGTGAAGTTTTTGCAGCTTCAAATCAAGGTAAATTGTTGAATAATGAATCATTATTCAAGAGAAGGATTTTCATAATTCTTTTTTCTGAATGAAGTTCTTATTCTTTTGTGTTGAATGAAACATGCAGTTGTTGAGCTCGGATGATTTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGTTGATGAAGCAAGACAATGCATCACAATAG

mRNA sequence

ATGGAAGGTGCCATTTCAGAAAGAGAATGGATATCTCTTAGTGGAGCTTATACTGCTGAAGAATCTGATTTTATGGCTAATTTACTCAGCAATTATTGTATTCCTAATGAGTTAAATTCAGATTTAAGCTTGGAAATTCCATCTTCTTATTGGGCTTCTTCTAATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATCTATGCCCTTTCACAACCCAATAACAATCTTCCTTACACTTTCAATGACTCTAACCCCACTCTTTGGTTGCCTAATAATGGTGCTTCCTTGTCCTTGGATTTTTCCATCGAGGATGTCCGGAATGCCGATTGCTTGGACGATAACGGTTCGAATATTCGTAAAACAAGGCAATGCAGCAGGCTGCAACAATCCCCTGCTGACTCTGTTGTCAATGGGAAGAGCTCACAACCGAAACGAAGAGCCAATGATGTGATGGTGGAAGAAGCTATGAGGGATGATAAAGTTGGACCGGTTGAAAAGACAAAAAGGAGCGGGAGGGCACGGAAGACATCGAAGATTGCTTCAGGTAGCTGCAATGAAGAGGATCAAATTGTTAGTCCAAATGGGCAATGCACAAGCAGTTTCAGCTCTGAAGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCACTTCTAGCTCAACCTCAAATGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAAGCCTCGTCCCAAATGGTACAAAGGTTGACATCAGTACAATGCTTGAAGAAGCTGTTCAATACGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCGGATGATTTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGTTGATGAAGCAAGACAATGCATCACAATAG

Coding sequence (CDS)

ATGGAAGGTGCCATTTCAGAAAGAGAATGGATATCTCTTAGTGGAGCTTATACTGCTGAAGAATCTGATTTTATGGCTAATTTACTCAGCAATTATTGTATTCCTAATGAGTTAAATTCAGATTTAAGCTTGGAAATTCCATCTTCTTATTGGGCTTCTTCTAATGAACCTTCTTATTATTCTTCAGATGCTTCTGATTCTTCCAATATCTATGCCCTTTCACAACCCAATAACAATCTTCCTTACACTTTCAATGACTCTAACCCCACTCTTTGGTTGCCTAATAATGGTGCTTCCTTGTCCTTGGATTTTTCCATCGAGGATGTCCGGAATGCCGATTGCTTGGACGATAACGGTTCGAATATTCGTAAAACAAGGCAATGCAGCAGGCTGCAACAATCCCCTGCTGACTCTGTTGTCAATGGGAAGAGCTCACAACCGAAACGAAGAGCCAATGATGTGATGGTGGAAGAAGCTATGAGGGATGATAAAGTTGGACCGGTTGAAAAGACAAAAAGGAGCGGGAGGGCACGGAAGACATCGAAGATTGCTTCAGGTAGCTGCAATGAAGAGGATCAAATTGTTAGTCCAAATGGGCAATGCACAAGCAGTTTCAGCTCTGAAGATGATTGTAATGAGGCTCAAGAAAACAATGGTGGAATCACTTCTAGCTCAACCTCAAATGGAAAGCCAAGAGCCAGTAGAGGCTCAGCCACAGACCCTCAAAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAAAGGTTGAGAATCTTACAAAGCCTCGTCCCAAATGGTACAAAGGTTGACATCAGTACAATGCTTGAAGAAGCTGTTCAATACGTGAAGTTTTTGCAGCTTCAAATCAAGTTGTTGAGCTCGGATGATTTATGGATGTATGCACCAATTGCTTACAATGGAATGGACATTGGACTTAACTTGAAGTTGATGAAGCAAGACAATGCATCACAATAG

Protein sequence

MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYYSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGSNIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ*
Homology
[Close]
BLAST of Cucsa.097490 vs. Swiss-Prot
Match: BH084_ARATH (Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-47
Identity = 136/335 (40.60%), Postives = 176/335 (52.54%), Query Frame = 1 

Query: 9   EWISLSGAYTAEESDFMANLLSNYCIP-----NELNSDLSL-EIPSSYWAS----SNEPS 68
           EW +  G    EE+DFM  LL++Y  P     +E  + L+      S W      S E S
Sbjct: 6   EWSTGLGGIYTEEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQESS 65

Query: 69  YYSS----------------DASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSL 128
            YS                 DA+ ++N+Y + +  +    T   S  +L LP    + + 
Sbjct: 66  SYSGYCAAMPRQEEDNNGMEDATINTNLYLVGEETSECDAT-EYSGKSL-LPLETVAENH 125

Query: 129 DFSIEDVRNADCLDDNGSNIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRD 188
           D S+    N+       ++ +   QC   ++    +  +      K R +   VE +  +
Sbjct: 126 DHSMLQPENSLTTT---TDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGEN 185

Query: 189 DKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGIT 248
           +  G  E T+++   RKT  +             P   C S   S        + +G  +
Sbjct: 186 ENSGEEEYTEKAAGKRKTKPL------------KPQKTCCSDDESNGGDTFLSKEDGEDS 245

Query: 249 SSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQY 308
            +   NGK RASRG+ATDPQSLYARKRRERINERLRILQ LVPNGTKVDISTMLEEAVQY
Sbjct: 246 KALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQY 305

Query: 309 VKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 318
           VKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LKL
Sbjct: 306 VKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 323

[Close]
BLAST of Cucsa.097490 vs. Swiss-Prot
Match: BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.0e-43
Identity = 118/287 (41.11%), Postives = 162/287 (56.45%), Query Frame = 1 

Query: 39  NSDLSLEIPSSYWASSNEPSYYS-SDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNG 98
           NS     +P +   + NE   +   D + ++N Y + +  +        S  TL      
Sbjct: 85  NSGYYTVVPPTVEENQNETMDFGMEDVTINTNSYLVGEETSECDVEKYSSGKTL------ 144

Query: 99  ASLSLDFSIEDVRNADCLDDNGSNIRKTRQCS-RLQQSPADSVVNGKSSQPKRRANDVMV 158
             + L+  +E+  + + L  +  ++  T+  +   ++S A S    K ++  +RA   + 
Sbjct: 145 --MPLETVVENHDDEESLLQSEISVTTTKSLTGSKKRSRATSTDKNKRARVNKRAQKNV- 204

Query: 159 EEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQE 218
            E   D+  G  E+ +   + RK   + S                +++F +E++ N A +
Sbjct: 205 -EMSGDNNEGEEEEGETKLKKRKNGAMMSRQ------------NSSTTFCTEEESNCADQ 264

Query: 219 NNGGITSSSTS---------NGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNG 278
           + GG  SSS           NGK RASRG+ATDPQSLYARKRRERINERLRILQ+LVPNG
Sbjct: 265 DGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNG 324

Query: 279 TKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 315
           TKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 325 TKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLS 349

[Close]
BLAST of Cucsa.097490 vs. Swiss-Prot
Match: BH139_ARATH (Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.4e-37
Identity = 92/189 (48.68%), Postives = 126/189 (66.67%), Query Frame = 1 

Query: 133 QSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEED 192
           QS   +V++G + Q  R  +        R D + P +K K S  +   +         E 
Sbjct: 53  QSNYAAVLDGSNHQTNRNVDS-------RQDLLKPRKKQKLSSESNLVT---------EP 112

Query: 193 QIVSPNGQCTSSFSSEDDCNEAQENNGGITSSSTS-NGKPRASRGSATDPQSLYARKRRE 252
           +    +GQ  SS++S DD    ++  G ++++S S   K +A+RG A+DPQSLYARKRRE
Sbjct: 113 KTAWRDGQSLSSYNSSDD----EKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRE 172

Query: 253 RINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 312
           RIN+RL+ LQSLVPNGTKVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++
Sbjct: 173 RINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNM 221

Query: 313 GLNLKLMKQ 321
           GL+  L+ +
Sbjct: 233 GLHHNLLSR 221

[Close]
BLAST of Cucsa.097490 vs. Swiss-Prot
Match: BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.1e-36
Identity = 76/109 (69.72%), Postives = 91/109 (83.49%), Query Frame = 1 

Query: 212 NEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVD 271
           N + +    +TS     GK RA++G+ATDPQSLYARKRRE+INERL+ LQ+LVPNGTKVD
Sbjct: 151 NSSDDEKASVTSVK---GKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD 210

Query: 272 ISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 321
           ISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+ +
Sbjct: 211 ISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLLSR 256

[Close]
BLAST of Cucsa.097490 vs. Swiss-Prot
Match: BH083_ARATH (Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.6e-20
Identity = 55/117 (47.01%), Postives = 79/117 (67.52%), Query Frame = 1 

Query: 183 IASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQ 242
           + +GS NE    +SP     S+ +      E+ + +  ++S  T   KP+ +  S  DPQ
Sbjct: 155 VTTGSRNES---LSPK----SAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTT-SPKDPQ 214

Query: 243 SLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 300
           SL A+ RRERI+ERL+ILQ LVPNGTKVD+ TMLE+A+ YVKFLQ+Q+K+L++D+ W
Sbjct: 215 SLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFW 263

[Close]
BLAST of Cucsa.097490 vs. TrEMBL
Match: A0A0A0KT10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000890 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 5.2e-180
Identity = 325/341 (95.31%), Postives = 325/341 (95.31%), Query Frame = 1 

Query: 1   MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYY 60
           MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYY
Sbjct: 1   MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYY 60

Query: 61  SSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGS 120
           SSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGS
Sbjct: 61  SSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGS 120

Query: 121 NIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGP------------- 180
           NIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGP             
Sbjct: 121 NIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSRKRPQS 180

Query: 181 ---VEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSS 240
              VEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSS
Sbjct: 181 LLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSS 240

Query: 241 STSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVK 300
           STSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVK
Sbjct: 241 STSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVK 300

Query: 301 FLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 326
           FLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 301 FLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341

[Close]
BLAST of Cucsa.097490 vs. TrEMBL
Match: A0A061E855_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_007220 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.0e-75
Identity = 177/357 (49.58%), Postives = 225/357 (63.03%), Query Frame = 1 

Query: 1   MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWA------SS 60
           M  AI E EW SLSG YT EE+DFMA LLSN  +PNEL+   +L IPS+YW       S 
Sbjct: 4   MGAAILEGEWSSLSGTYTTEEADFMAQLLSNCPLPNELDGSSNLGIPSTYWPGHHSTISM 63

Query: 61  NEPSYYSSDASDSSNIYALSQ-------------PNNNLPYTFNDSNPTLWLPNNGASLS 120
              SY SSD +D+S+ Y+ SQ              ++   Y  +DS+P +++ NN + +S
Sbjct: 64  KAASYCSSDIADTSS-YSFSQGSSYSAGSSIVFPSSSQESYYLSDSHP-IFVANN-SPMS 123

Query: 121 LDFSIEDVRNA--------DCLDDNGSNIRKTRQCSRLQQSPADSVVNGKSSQPKR---- 180
           +DF +ED  N         DCL+    N     Q  +  Q PA   +  K+ +PKR    
Sbjct: 124 MDFCMEDATNTSSYLVEGDDCLNQEMGN-GNVEQAGKSHQEPA---LPNKNLEPKRESEI 183

Query: 181 ---------RANDVMVEEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQ 240
                    ++N++      R    G V+K +++ R++K    AS + N++D     NGQ
Sbjct: 184 PQPEPVTEIKSNNISENSKKRSRSSGDVQKNRQNARSKKNQGSASTTNNDKDGNAGLNGQ 243

Query: 241 CTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRIL 300
            ++S SS+DD N +QE NGG  ++   NGK RASRG+ATDPQSLYARKRRERINERLRIL
Sbjct: 244 SSASCSSDDDSNASQELNGG-QAALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 303

Query: 301 QSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 318
           Q+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LK+
Sbjct: 304 QNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKV 352

[Close]
BLAST of Cucsa.097490 vs. TrEMBL
Match: A5CAE3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021999 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.7e-66
Identity = 168/347 (48.41%), Postives = 214/347 (61.67%), Query Frame = 1 

Query: 3   GAISEREWISLSGAYTAEESDFMANLLSNYC-IPNELNSDLSLEIPSSYWASSNEP---S 62
           GAISE EW SLSG YT EE++FMA LL N    PNEL+   SL IPS++WA+ NE    S
Sbjct: 5   GAISEGEWGSLSGMYTTEEAEFMAQLLGNCSSFPNELDGGSSLGIPSAFWAAGNESVNKS 64

Query: 63  YYSSDASDSSNIYALSQ-------------PNNNLP-YTFNDSNPTLWLPNNGASLSLDF 122
            Y S  + ++N+Y  SQ             PN++   Y  +DS   L    N +++S+DF
Sbjct: 65  LYCSSDAANTNLYCFSQGSSSYSGGSSSLFPNSSQGNYYLSDSQQVLG--GNNSAMSMDF 124

Query: 123 SIEDVRN--------ADCLDDNGSNIRKTRQCSRL--QQSPADSVVNGKSSQPKRRANDV 182
            I D +N        AD L +         +C R   +     S    K+++    +   
Sbjct: 125 CIGDDKNNSLAVQVFADSLMEGDEYCLNVEECRRNFPEMPELPSATEDKNNKMPENS--- 184

Query: 183 MVEEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEA 242
             ++ MRD   G V+K KR+ + +K+ K  S +  E++     NGQ +SS SSED+   +
Sbjct: 185 --KKRMRDS--GDVQKNKRNVK-KKSQKSVSSNNEEDNNGGVVNGQSSSSCSSEDESIAS 244

Query: 243 QENNGGITSSST----SNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV 302
           QE NG  +   +    S  K RASRGSATDPQSLYARKRRERINERL+ILQ+LVPNGTKV
Sbjct: 245 QELNGSSSPKGSAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV 304

Query: 303 DISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 318
           DISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAP+AYNGMDIGL+LK+
Sbjct: 305 DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPLAYNGMDIGLDLKI 341

[Close]
BLAST of Cucsa.097490 vs. TrEMBL
Match: B9HMZ0_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s09210g PE=4 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 1.1e-65
Identity = 162/355 (45.63%), Postives = 218/355 (61.41%), Query Frame = 1 

Query: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWAS--------- 62
           G+++E EW SL G YT+EE+DFMA LL N   PN+++S  +  +PSS+W +         
Sbjct: 5   GSMAEGEWSSLGGMYTSEEADFMAQLLGN--CPNQVDSSSNFGVPSSFWPNHEPTTDMEG 64

Query: 63  SNEPSYYSSDASDSSNIYALSQ-------------PNNNLP-YTFNDSNPTLWLPNNGAS 122
           +NE  +YS D ++  N++  SQ             PN +   Y  +DS+P L   NN +S
Sbjct: 65  ANECLFYSLDFANI-NLHHFSQGSSSYSGGSGILFPNTSQDSYYMSDSHPIL--ANNNSS 124

Query: 123 LSLDFSIED---VRNADCLDDNGSNIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMV 182
           +S+DF + D   V   DC +   SN  +    ++   +  ++    K  +P+  A+++ +
Sbjct: 125 MSMDFCMGDSYLVEGDDCSNQEMSNSNEEPGGNQTVAALPENDFRAKR-EPEMPASELPL 184

Query: 183 EEAM---------RDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSS 242
           E+           R    G  +K KR+  ++K+ K+AS S N+E      NG  +S   S
Sbjct: 185 EDKSSNPPQISKKRSRNSGDAQKNKRNASSKKSQKVASTSNNDEGSNAGLNGPASSGCCS 244

Query: 243 EDDCNEAQENNGGITSSSTS--------NGKPRASRGSATDPQSLYARKRRERINERLRI 302
           ED+ N + E N G +SS +S        +GK RASRG+ATDPQSLYARKRRERINERLRI
Sbjct: 245 EDESNASHELNRGASSSLSSKGTATLNSSGKTRASRGAATDPQSLYARKRRERINERLRI 304

Query: 303 LQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 315
           LQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS+DLWMYAPIAYNGMDIGL+
Sbjct: 305 LQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDLWMYAPIAYNGMDIGLD 353

[Close]
BLAST of Cucsa.097490 vs. TrEMBL
Match: B9GI92_POPTR (Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0001s30150g PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 9.5e-65
Identity = 159/334 (47.60%), Postives = 209/334 (62.57%), Query Frame = 1 

Query: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWAS--------- 62
           GA +E EW SLSG YT+EE+DFM  LL N C PN+++S  S  +PSS+W +         
Sbjct: 5   GATAEGEWSSLSGMYTSEEADFMEQLLVN-CPPNQVDSSSSFGVPSSFWPNHESTMNMEG 64

Query: 63  SNEPSYYSSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNAD 122
           +NE   YS D +D+ N+Y  SQ ++      ++ N    +  +G +          +   
Sbjct: 65  ANECLLYSLDIADT-NLYHFSQVSSGYSGELSNGN----VEESGGN----------QTVA 124

Query: 123 CLDDNGSNIRKTRQCSRLQQSPADSV-VNGKSSQPKRRANDVMVEEAMRDDKVGPVEKTK 182
            L +  SN++  R+     + PA  + +  KS +P   +         R  + G  +K K
Sbjct: 125 ALPEPESNLQPKRE----SKMPASELPLEDKSRKPPENSKK-------RSRRTGDAQKNK 184

Query: 183 RSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSSSTS----- 242
           R+ R++K+ K+AS   N+E+     NG  +S   SED+ N +QE NGG +SS +S     
Sbjct: 185 RNVRSKKSQKVASTGNNDEESNGGLNGPVSSGCCSEDESNASQELNGGASSSLSSKGTTT 244

Query: 243 ---NGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVK 302
              +GK RAS+G+ATDPQSLYARKRRERINERLRILQ+LVPNGTKVDISTMLEEAVQYVK
Sbjct: 245 LNSSGKTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVK 304

Query: 303 FLQLQIKLLSSDDLWMYAPIAYNGMDIGL-NLKL 318
           FLQLQIKLLSS+DLWMYAPIAYNGMDIGL +LKL
Sbjct: 305 FLQLQIKLLSSEDLWMYAPIAYNGMDIGLDHLKL 311

[Close]
BLAST of Cucsa.097490 vs. TAIR10
Match: AT2G14760.3 (AT2G14760.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 6.8e-46
Identity = 136/348 (39.08%), Postives = 176/348 (50.57%), Query Frame = 1 

Query: 9   EWISLSGAYTAEESDFMANLLSNYCIP-----NELNSDLSL-EIPSSYWAS----SNEPS 68
           EW +  G    EE+DFM  LL++Y  P     +E  + L+      S W      S E S
Sbjct: 6   EWSTGLGGIYTEEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCFSQESS 65

Query: 69  YYSS----------------DASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSL 128
            YS                 DA+ ++N+Y + +  +    T   S  +L LP    + + 
Sbjct: 66  SYSGYCAAMPRQEEDNNGMEDATINTNLYLVGEETSECDAT-EYSGKSL-LPLETVAENH 125

Query: 129 DFSIEDVRNADCLDDNGSNIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRD 188
           D S+    N+       ++ +   QC   ++    +  +      K R +   VE +  +
Sbjct: 126 DHSMLQPENSLTTT---TDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGEN 185

Query: 189 DKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGIT 248
           +  G  E T+++   RKT  +             P   C S   S        + +G  +
Sbjct: 186 ENSGEEEYTEKAAGKRKTKPL------------KPQKTCCSDDESNGGDTFLSKEDGEDS 245

Query: 249 SSSTSNGKPRASRGSATDPQSLYAR-------------KRRERINERLRILQSLVPNGTK 308
            +   NGK RASRG+ATDPQSLYAR             KRRERINERLRILQ LVPNGTK
Sbjct: 246 KALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTK 305

Query: 309 VDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 318
           VDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LKL
Sbjct: 306 VDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 336

[Close]
BLAST of Cucsa.097490 vs. TAIR10
Match: AT4G33880.1 (AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 2)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-44
Identity = 118/287 (41.11%), Postives = 162/287 (56.45%), Query Frame = 1 

Query: 39  NSDLSLEIPSSYWASSNEPSYYS-SDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNG 98
           NS     +P +   + NE   +   D + ++N Y + +  +        S  TL      
Sbjct: 85  NSGYYTVVPPTVEENQNETMDFGMEDVTINTNSYLVGEETSECDVEKYSSGKTL------ 144

Query: 99  ASLSLDFSIEDVRNADCLDDNGSNIRKTRQCS-RLQQSPADSVVNGKSSQPKRRANDVMV 158
             + L+  +E+  + + L  +  ++  T+  +   ++S A S    K ++  +RA   + 
Sbjct: 145 --MPLETVVENHDDEESLLQSEISVTTTKSLTGSKKRSRATSTDKNKRARVNKRAQKNV- 204

Query: 159 EEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQE 218
            E   D+  G  E+ +   + RK   + S                +++F +E++ N A +
Sbjct: 205 -EMSGDNNEGEEEEGETKLKKRKNGAMMSRQ------------NSSTTFCTEEESNCADQ 264

Query: 219 NNGGITSSSTS---------NGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNG 278
           + GG  SSS           NGK RASRG+ATDPQSLYARKRRERINERLRILQ+LVPNG
Sbjct: 265 DGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNG 324

Query: 279 TKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 315
           TKVDISTMLEEAV YVKFLQLQIKLLSSDDLWMYAPIA+NGMDIGL+
Sbjct: 325 TKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGLS 349

[Close]
BLAST of Cucsa.097490 vs. TAIR10
Match: AT5G43175.1 (AT5G43175.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 3.1e-38
Identity = 92/189 (48.68%), Postives = 126/189 (66.67%), Query Frame = 1 

Query: 133 QSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEED 192
           QS   +V++G + Q  R  +        R D + P +K K S  +   +         E 
Sbjct: 53  QSNYAAVLDGSNHQTNRNVDS-------RQDLLKPRKKQKLSSESNLVT---------EP 112

Query: 193 QIVSPNGQCTSSFSSEDDCNEAQENNGGITSSSTS-NGKPRASRGSATDPQSLYARKRRE 252
           +    +GQ  SS++S DD    ++  G ++++S S   K +A+RG A+DPQSLYARKRRE
Sbjct: 113 KTAWRDGQSLSSYNSSDD----EKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRE 172

Query: 253 RINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDI 312
           RIN+RL+ LQSLVPNGTKVDISTMLE+AV YVKFLQLQIKLLSS+DLWMYAP+A+NG+++
Sbjct: 173 RINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWMYAPLAHNGLNM 221

Query: 313 GLNLKLMKQ 321
           GL+  L+ +
Sbjct: 233 GLHHNLLSR 221

[Close]
BLAST of Cucsa.097490 vs. TAIR10
Match: AT1G27740.1 (AT1G27740.1 root hair defective 6-like 4)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 76/109 (69.72%), Postives = 91/109 (83.49%), Query Frame = 1 

Query: 212 NEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVD 271
           N + +    +TS     GK RA++G+ATDPQSLYARKRRE+INERL+ LQ+LVPNGTKVD
Sbjct: 151 NSSDDEKASVTSVK---GKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD 210

Query: 272 ISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQ 321
           ISTMLEEAV YVKFLQLQIKLLSSDDLWMYAP+AYNG+D+G +  L+ +
Sbjct: 211 ISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLLSR 256

[Close]
BLAST of Cucsa.097490 vs. TAIR10
Match: AT1G66470.1 (AT1G66470.1 ROOT HAIR DEFECTIVE6)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-21
Identity = 55/117 (47.01%), Postives = 79/117 (67.52%), Query Frame = 1 

Query: 183 IASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQ 242
           + +GS NE    +SP     S+ +      E+ + +  ++S  T   KP+ +  S  DPQ
Sbjct: 155 VTTGSRNES---LSPK----SAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTT-SPKDPQ 214

Query: 243 SLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW 300
           SL A+ RRERI+ERL+ILQ LVPNGTKVD+ TMLE+A+ YVKFLQ+Q+K+L++D+ W
Sbjct: 215 SLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFW 263

[Close]
BLAST of Cucsa.097490 vs. NCBI nr
Match: gi|449469332|ref|XP_004152375.1| (PREDICTED: transcription factor bHLH84 [Cucumis sativus])

HSP 1 Score: 638.3 bits (1645), Expect = 7.5e-180
Identity = 325/341 (95.31%), Postives = 325/341 (95.31%), Query Frame = 1 

Query: 1   MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYY 60
           MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYY
Sbjct: 1   MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYY 60

Query: 61  SSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGS 120
           SSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGS
Sbjct: 61  SSDASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGASLSLDFSIEDVRNADCLDDNGS 120

Query: 121 NIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGP------------- 180
           NIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGP             
Sbjct: 121 NIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPVSVENFSRKRPQS 180

Query: 181 ---VEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSS 240
              VEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSS
Sbjct: 181 LLDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSS 240

Query: 241 STSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVK 300
           STSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVK
Sbjct: 241 STSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVK 300

Query: 301 FLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 326
           FLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 301 FLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 341

[Close]
BLAST of Cucsa.097490 vs. NCBI nr
Match: gi|659108790|ref|XP_008454391.1| (PREDICTED: transcription factor bHLH84-like [Cucumis melo])

HSP 1 Score: 604.4 bits (1557), Expect = 1.2e-169
Identity = 312/340 (91.76%), Postives = 318/340 (93.53%), Query Frame = 1 

Query: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWASSNEPSYYSS 62
           GAISEREWISLSGAYTAEESDFMANLL+NYCIPNELNSDL+LEIPSSYWASSNEPSYYSS
Sbjct: 4   GAISEREWISLSGAYTAEESDFMANLLNNYCIPNELNSDLTLEIPSSYWASSNEPSYYSS 63

Query: 63  DASDSSNIYALSQPNNNLPYTFNDSNPTLWLPNNGAS-LSLDFSIEDVRNADCLDDNGSN 122
           DASDSSNIYALSQPNNNLPYTFN+SNP LW+PNNGAS LSLDFS+EDV NADCLDDNGSN
Sbjct: 64  DASDSSNIYALSQPNNNLPYTFNESNP-LWMPNNGASSLSLDFSVEDVGNADCLDDNGSN 123

Query: 123 IRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMVEEAMRDDKVGPV------------- 182
           IRKTRQCSRLQQSPADSVVNGKSSQ KRRA+ VMVEEAMRDDKVGPV             
Sbjct: 124 IRKTRQCSRLQQSPADSVVNGKSSQQKRRADGVMVEEAMRDDKVGPVSVENASRKRPQSL 183

Query: 183 ---EKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQENNGGITSSS 242
              EKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQE NGGITSSS
Sbjct: 184 LDVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEAQEINGGITSSS 243

Query: 243 TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKF 302
           TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKF
Sbjct: 244 TSNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKF 303

Query: 303 LQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 326
           LQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ
Sbjct: 304 LQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKLMKQDNASQ 342

[Close]
BLAST of Cucsa.097490 vs. NCBI nr
Match: gi|590687323|ref|XP_007042632.1| (Basic helix-loop-helix DNA-binding superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 289.3 bits (739), Expect = 8.6e-75
Identity = 177/357 (49.58%), Postives = 225/357 (63.03%), Query Frame = 1 

Query: 1   MEGAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWA------SS 60
           M  AI E EW SLSG YT EE+DFMA LLSN  +PNEL+   +L IPS+YW       S 
Sbjct: 4   MGAAILEGEWSSLSGTYTTEEADFMAQLLSNCPLPNELDGSSNLGIPSTYWPGHHSTISM 63

Query: 61  NEPSYYSSDASDSSNIYALSQ-------------PNNNLPYTFNDSNPTLWLPNNGASLS 120
              SY SSD +D+S+ Y+ SQ              ++   Y  +DS+P +++ NN + +S
Sbjct: 64  KAASYCSSDIADTSS-YSFSQGSSYSAGSSIVFPSSSQESYYLSDSHP-IFVANN-SPMS 123

Query: 121 LDFSIEDVRNA--------DCLDDNGSNIRKTRQCSRLQQSPADSVVNGKSSQPKR---- 180
           +DF +ED  N         DCL+    N     Q  +  Q PA   +  K+ +PKR    
Sbjct: 124 MDFCMEDATNTSSYLVEGDDCLNQEMGN-GNVEQAGKSHQEPA---LPNKNLEPKRESEI 183

Query: 181 ---------RANDVMVEEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQ 240
                    ++N++      R    G V+K +++ R++K    AS + N++D     NGQ
Sbjct: 184 PQPEPVTEIKSNNISENSKKRSRSSGDVQKNRQNARSKKNQGSASTTNNDKDGNAGLNGQ 243

Query: 241 CTSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRIL 300
            ++S SS+DD N +QE NGG  ++   NGK RASRG+ATDPQSLYARKRRERINERLRIL
Sbjct: 244 SSASCSSDDDSNASQELNGG-QAALNLNGKTRASRGAATDPQSLYARKRRERINERLRIL 303

Query: 301 QSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 318
           Q+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGL+LK+
Sbjct: 304 QNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKV 352

[Close]
BLAST of Cucsa.097490 vs. NCBI nr
Match: gi|147866312|emb|CAN79863.1| (hypothetical protein VITISV_021999 [Vitis vinifera])

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 168/347 (48.41%), Postives = 214/347 (61.67%), Query Frame = 1 

Query: 3   GAISEREWISLSGAYTAEESDFMANLLSNYC-IPNELNSDLSLEIPSSYWASSNEP---S 62
           GAISE EW SLSG YT EE++FMA LL N    PNEL+   SL IPS++WA+ NE    S
Sbjct: 5   GAISEGEWGSLSGMYTTEEAEFMAQLLGNCSSFPNELDGGSSLGIPSAFWAAGNESVNKS 64

Query: 63  YYSSDASDSSNIYALSQ-------------PNNNLP-YTFNDSNPTLWLPNNGASLSLDF 122
            Y S  + ++N+Y  SQ             PN++   Y  +DS   L    N +++S+DF
Sbjct: 65  LYCSSDAANTNLYCFSQGSSSYSGGSSSLFPNSSQGNYYLSDSQQVLG--GNNSAMSMDF 124

Query: 123 SIEDVRN--------ADCLDDNGSNIRKTRQCSRL--QQSPADSVVNGKSSQPKRRANDV 182
            I D +N        AD L +         +C R   +     S    K+++    +   
Sbjct: 125 CIGDDKNNSLAVQVFADSLMEGDEYCLNVEECRRNFPEMPELPSATEDKNNKMPENS--- 184

Query: 183 MVEEAMRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSSEDDCNEA 242
             ++ MRD   G V+K KR+ + +K+ K  S +  E++     NGQ +SS SSED+   +
Sbjct: 185 --KKRMRDS--GDVQKNKRNVK-KKSQKSVSSNNEEDNNGGVVNGQSSSSCSSEDESIAS 244

Query: 243 QENNGGITSSST----SNGKPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKV 302
           QE NG  +   +    S  K RASRGSATDPQSLYARKRRERINERL+ILQ+LVPNGTKV
Sbjct: 245 QELNGSSSPKGSAALNSKDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKV 304

Query: 303 DISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNLKL 318
           DISTMLEEAV+YVKFLQLQIKLLSSDDLWMYAP+AYNGMDIGL+LK+
Sbjct: 305 DISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPLAYNGMDIGLDLKI 341

[Close]
BLAST of Cucsa.097490 vs. NCBI nr
Match: gi|743795155|ref|XP_011001917.1| (PREDICTED: transcription factor bHLH84-like isoform X1 [Populus euphratica])

HSP 1 Score: 260.8 bits (665), Expect = 3.3e-66
Identity = 162/355 (45.63%), Postives = 220/355 (61.97%), Query Frame = 1 

Query: 3   GAISEREWISLSGAYTAEESDFMANLLSNYCIPNELNSDLSLEIPSSYWAS--------- 62
           G+++E EW SL G YT+EE+DFMA LL N C PN+++S  +  +PSS+W +         
Sbjct: 5   GSMAEGEWSSLGGMYTSEEADFMAQLLGN-CPPNQVDSSSNFGVPSSFWPNHEPTTDMEG 64

Query: 63  SNEPSYYSSDASDSSNIYALSQ-------------PNNNLP-YTFNDSNPTLWLPNNGAS 122
           +NE S+YS D ++  N++  SQ             PN +   Y  +DS+P L +  N +S
Sbjct: 65  ANECSFYSLDFANI-NLHHFSQGSSSYSGGSGILFPNTSQDSYYMSDSHPILAI--NNSS 124

Query: 123 LSLDFSIED---VRNADCLDDNGSNIRKTRQCSRLQQSPADSVVNGKSSQPKRRANDVMV 182
           +S+DF + D   V   DC +   SN  +    ++   +  ++    K  +P+  A+++ +
Sbjct: 125 MSMDFCMGDSYLVEGDDCSNQEMSNSNEEPGGNQTVAALPENDFRAKR-EPEMPASELPL 184

Query: 183 EEA---------MRDDKVGPVEKTKRSGRARKTSKIASGSCNEEDQIVSPNGQCTSSFSS 242
           E+           R    G  +K KR+  ++K+ K+AS S N+E      NG  +S   S
Sbjct: 185 EDKNSNPPQISKKRSRNSGDAQKNKRNASSKKSQKVASTSNNDEGSDAGLNGPASSGCCS 244

Query: 243 EDDCNEAQENNGGITSSSTS--------NGKPRASRGSATDPQSLYARKRRERINERLRI 302
           ED+ N + E N G +SS +S        +GK RASRG+ATDPQSLYARKRRERINERLRI
Sbjct: 245 EDESNASHELNRGASSSLSSKGTATLNSSGKTRASRGAATDPQSLYARKRRERINERLRI 304

Query: 303 LQSLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLN 315
           LQ+LVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS+D+WMYAPIAYNGMDIGL+
Sbjct: 305 LQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSEDMWMYAPIAYNGMDIGLD 354

The following BLAST results are available for this feature:
BLAST of Cucsa.097490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH084_ARATH2.0e-4740.60Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2 SV=1[more]
BH085_ARATH3.0e-4341.11Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2 SV=1[more]
BH139_ARATH5.4e-3748.68Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139 PE=3 SV=1[more]
BH054_ARATH2.1e-3669.72Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2 SV=1[more]
BH083_ARATH4.6e-2047.01Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2 SV=1[more]
BLAST of Cucsa.097490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT10_CUCSA5.2e-18095.31Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000890 PE=4 SV=1[more]
A0A061E855_THECC6.0e-7549.58Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca... [more]
A5CAE3_VITVI1.7e-6648.41Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021999 PE=4 SV=1[more]
B9HMZ0_POPTR1.1e-6545.63Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0009s09210... [more]
B9GI92_POPTR9.5e-6547.60Basic helix-loop-helix family protein OS=Populus trichocarpa GN=POPTR_0001s30150... [more]
BLAST of Cucsa.097490 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G14760.36.8e-4639.08 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G33880.11.7e-4441.11 ROOT HAIR DEFECTIVE 6-LIKE 2[more]
AT5G43175.13.1e-3848.68 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G27740.11.2e-3769.72 root hair defective 6-like 4[more]
AT1G66470.12.6e-2147.01 ROOT HAIR DEFECTIVE6[more]
BLAST of Cucsa.097490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469332|ref|XP_004152375.1|7.5e-18095.31PREDICTED: transcription factor bHLH84 [Cucumis sativus][more]
gi|659108790|ref|XP_008454391.1|1.2e-16991.76PREDICTED: transcription factor bHLH84-like [Cucumis melo][more]
gi|590687323|ref|XP_007042632.1|8.6e-7549.58Basic helix-loop-helix DNA-binding superfamily protein, putative [Theobroma caca... [more]
gi|147866312|emb|CAN79863.1|2.5e-6648.41hypothetical protein VITISV_021999 [Vitis vinifera][more]
gi|743795155|ref|XP_011001917.1|3.3e-6645.63PREDICTED: transcription factor bHLH84-like isoform X1 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.097490.1Cucsa.097490.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 242..296
score: 4.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 247..287
score: 5.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 243..292
score: 2.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 237..286
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 237..303
score: 2.75
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 4..318
score: 6.3
NoneNo IPR availablePANTHERPTHR16223:SF9TRANSCRIPTION FACTOR BHLH139-RELATEDcoord: 4..318
score: 6.3