Carg19108 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19108
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CTTNBP 2 amino-terminal-like protein
Location	Cucurbita_argyrosperma_scaffold_112 : 228282 .. 231284 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGCGAGCAAGAATGGGGCGACATAGCGCCGCCACTGCCGGCGGTGTTGCCGTTAAACCCAGAAAGAGAGGAGTATTGGAGTCGATTTGATGATTCTGTTAATGCGGTTTCGTTTGGGTTTGTAGCGACTGCCATTCTAATCTCTATGTTCCTTGTTATGGCCATTTTTGAGAGGTTTCTTAGACCCAGGACGGCGGCGGACATGGGCCGGCCGCCTTCTGATCTTGAAGCACAGATGGTGTTCGATGAAAAGCTTCGTTACCCATCTCCCAAGGTTCTTGTCTTCTCTTCTCTGCTACTGCATTTTGATGTTGGCTGATATCTTGCTTGCTTTTCTAAATTCAAATAGTTTCTTTATCTAAGAACACAATAAATTCCTTTGGTGTCAATTAATGATGTCTTGACTATTTTTGAACAGTTTTCTTCTGAAAATTTCTGTATTATCTCTGTTTGCTTACATTAATATGATAGTTTTTCCTTATTCTAGATGTTAATGATAATGGACCCACACCATGTAGGTAGCATGTGTTTTTGTCTCAACTGTGATAGCAATCCAACCAGGAACAAGATTTGAGAGGCAAAACAAGTTCACAAGGCATTAAACTGTGTCAAGCTGCTCATGGTTTCTTAAGCATTAGTAGCTAATGAACGGTGGGATCCCATGTCGATTGGAGAGGGGAATGAAGTATTCCTTACAAGGGTGTGGAAACCTCTCCCTAAAAGACGTATTTTAAAATCTTGAGTGGAAGCCAGAAGGGAAAACTCATAGAGGATAATACTGCTAGTGGTGGGTTTGGGTTGTTACAAATGGTATCAGAGCCAGATACCGAGCGTTGTGTTGACGAGGACGCTAGGCCTCCAAGAAGGGTGGAGGGTGTGGAAATCACTTAAGGGTGGAAGGTGTGGAAACCACTTAAAGGTGGAGGGTGTGAAAACCTCTCCCTAACAGACAAGGGCCCTAATAGACGATGGAGGGTGTGAAAACCTCTCCCTAACAGACAAGGGCCCTAATAGACGATGGAGGGTGTGGAAGCCTCTCAAGGATGGAGGGTGTGAAAACCTCTCCCTAACAGACAAGAGCCCTAATAGACGATGGAGGGTGTGGAAGCCTCTCAGGGATGGAGGGTGTGAAAACCTCTCCCTAATATACAAGGGCCCTAATAGACGAGGGGAACAAAGTATTCCTTATAAGATTATGGAAACCTCTCCCTAACATACGCGTTTTAAAACATTGAGGAGAAACCCAAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTATGACATTTTGAATGAGCAGATTATTCAATGTCGTATCGATTTAACAAGTTTCGTTGACAATTCAATCCTATACCATTTAATGCATTGTTCATACAAACATAATCACATGCTATGTCTCCCTTTGTGATTACAATATAGAAATATGCACATATTTTGAAGTATTTATAGCTTTAATAAAGTGTGTCAAAGTCTAAGCTGTCACCATTTTCAATATCCTTTCCCTACATTCTATAAGGTATAGTTGTACCATATTAGCATGTACAGCTGAGTTTCAATTCTTTATGTTGGAAAGTATACTAACAGAATAGAAGGAGAGGTCATGGATGATTTCGAATCGGCTTCCACTAGTTTGTGTTCTAATCTTGCACCTCAAGTATCATAAAGTTGTTCTCCTTTTTGCTCGTAGGCCAGCTATTTTCGACTCAAAGTCTAAATGGTGATCATTATTAATGAGTTTTCTTTGTTGTTTGAGGACATTTTCTTTTAATCACCATCATGTTTGATCATGTGCCTTTTTCGTTCTCTTCGTAACGGGAAAAAGGCGAAAGAAAAAGGGGAGTGAGGTTGTGAGATCCCACGTCGGTTGGAGATGGGAACGAAACATTTTTTATAAGGATGTAGAAGCCTCTCCTTAGCCGTTTTAAAATCTTTGAGGAAAAACCCAATAGGAAAAGTTCAAAGAGGACAATATTTGCTAGTAATGGGCTTGAACTGTTGCAAATGGTATCAGAGTCAAACACTGGGCGGTGTGCTAGTGAGGACGCTGAGCCCCCAAAGAGGGGTGGACACCGAACGGTGTGCCAGCGGGGATACTGAGCCATGAAGAGGGGTGGACACCGAGTGGTGTGCCAACGAGGACGCTGAGCCATGAAGAGGGATGGACACCGAGTGGAATGCTAGCAAAGAGGGGTGAACACCGAGTGGTGTGCCAGCGAGGACGCTGAGCTACGAAGAGGGGTGAACACTGAGAGGTGTGTCAGCGAGTACGTTGGACCCTAAAGGAGGGTGGACTGTGAGATCCCACATCGATTGGAGAGGGGAGAGTGCCAACAACGACGCTGGGTCTTGAAGGGGGGTTGATTGTAAGATTCCACATCGGTTGGAGAAGGGAACGGAACTTTTTTTATAAGGGTGTGGAAACTTCTCTCTAGCAAACGAGTTTTAAAAACTTTGAGTAGAAACTCGGAAGAAAAAGCCCAAAAAAAGACGATTCTTTATTATCAACTGTGACTCCACAGTGTTCAACTCATTAAACTCTCTCTCTCTGATGAACAATATGCTACAGAATTTTCATGCATGAATTTCTACGAACAATCATTATTTTGTGGACCATGGACCCATTTTTGCACCGTTTCTGCTAAATTGTTGCAGCAATCTCAGAATCATGATAGTAGCAGCTATAATATAGTTCTTATGGTAATTAGATGAGTAATAGAGAAGCAACCTACTTTAAACTGATACACTTTTTGACTTGACTTATGTAGATGACTGTTTACGGTCGAGGAGTATCGGTGTTGATGCCCGGCGAAGCGATTCCAACCTACATTGCCCACCCTGTTCCTGCACCGTGCCCTCCCGAGCCCATTTTGAAGCCTCTGCATCCACATAACTTGAGCATCTGCCCGCCCTCAAGCTTAACAACAAGCTCCAACATCAGTTGACTAAAGAAACGTCATTACAGAACAAGGGTCAGGTCATGTAACAGCTCAAGCC

mRNA sequence

ATGGGCGGCGAGCAAGAATGGGGCGACATAGCGCCGCCACTGCCGGCGGTGTTGCCGTTAAACCCAGAAAGAGAGGAGTATTGGAGTCGATTTGATGATTCTGTTAATGCGGTTTCGTTTGGGTTTGTAGCGACTGCCATTCTAATCTCTATGTTCCTTGTTATGGCCATTTTTGAGAGGTTTCTTAGACCCAGGACGGCGGCGGACATGGGCCGGCCGCCTTCTGATCTTGAAGCACAGATGGTGTTCGATGAAAAGCTTCGTTACCCATCTCCCAAGATGACTGTTTACGGTCGAGGAGTATCGGTGTTGATGCCCGGCGAAGCGATTCCAACCTACATTGCCCACCCTGTTCCTGCACCGTGCCCTCCCGAGCCCATTTTGAAGCCTCTGCATCCACATAACTTGAGCATCTGCCCGCCCTCAAGCTTAACAACAAGCTCCAACATCAGTTGACTAAAGAAACGTCATTACAGAACAAGGGTCAGGTCATGTAACAGCTCAAGCC

Coding sequence (CDS)

ATGGGCGGCGAGCAAGAATGGGGCGACATAGCGCCGCCACTGCCGGCGGTGTTGCCGTTAAACCCAGAAAGAGAGGAGTATTGGAGTCGATTTGATGATTCTGTTAATGCGGTTTCGTTTGGGTTTGTAGCGACTGCCATTCTAATCTCTATGTTCCTTGTTATGGCCATTTTTGAGAGGTTTCTTAGACCCAGGACGGCGGCGGACATGGGCCGGCCGCCTTCTGATCTTGAAGCACAGATGGTGTTCGATGAAAAGCTTCGTTACCCATCTCCCAAGATGACTGTTTACGGTCGAGGAGTATCGGTGTTGATGCCCGGCGAAGCGATTCCAACCTACATTGCCCACCCTGTTCCTGCACCGTGCCCTCCCGAGCCCATTTTGAAGCCTCTGCATCCACATAACTTGAGCATCTGCCCGCCCTCAAGCTTAACAACAAGCTCCAACATCAGTTGA

Protein sequence

MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPAPCPPEPILKPLHPHNLSICPPSSLTTSSNIS

Homology

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_022930795.1 (uncharacterized protein LOC111437169 isoform X1 [Cucurbita moschata])

HSP 1 Score: 307.0 bits (785), Expect = 3.6e-80
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA
Sbjct: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLHPHNLSICPPSSLT+SSNI+
Sbjct: 121 PCPPEPILKPLHPHNLSICPPSSLTSSSNIN 151

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_023531017.1 (uncharacterized protein LOC111793399 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 4.7e-80
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAAD+GRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA
Sbjct: 61  FLRPRTAADIGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLHPHNLSICPPSSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHPHNLSICPPSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_022988986.1 (uncharacterized protein LOC111486185 isoform X1 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 5.2e-79
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGE IPTYIAHPVPA
Sbjct: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEEIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH HNLSICPPSSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHQHNLSICPPSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_004137014.1 (PREDICTED: uncharacterized protein LOC101213979 [Cucumis sativus] >KGN43593.1 hypothetical protein Csa_7G047290 [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 6.3e-69
Identity = 133/151 (88.08%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQ+WG IAP LPAV PLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR+ A +GRPPSDLEAQMVFD K RYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMVFDGKPRYPSPKMTVYARGVSVLMPGEEIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH H+LS+CP SSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHQHSLSMCPSSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_022969286.1 (uncharacterized protein LOC111468338 isoform X1 [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 1.9e-65
Identity = 126/151 (83.44%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MG +Q+W  IAP LPAV PLNPER+EYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGSDQKWEAIAPALPAVSPLNPERDEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR+ A +GRPPSDLEAQM+ D K RYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMMLDGKPRYPSPKMTVYDRGVSVLMPGEEIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH HNLS+C P+S+T+SSNIS
Sbjct: 121 PCPPEPILKPLHQHNLSLCQPTSVTSSSNIS 151

[Close]

BLAST of Carg19108 vs. TAIR10
Match: AT1G11120.1 (unknown protein)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-21
Identity = 68/142 (47.89%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 12  PPLPAVLPLNPEREEYW-SRFDDSVNAVSFGFVATAILISMFLVMAIFERFLR------P 71
           PP+ A  P+N  REE W S+FDDSVNAVSFGFVATAILISMFLVMAIFER +R       
Sbjct: 16  PPIGA--PMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRXXXXXXX 75

Query: 72  RTAADMGRPPSDLEAQMVFD---EKLRYPSPK--------------------------MT 118
                  R    +++++ F+    KL Y SPK                          MT
Sbjct: 76  XXXXXXXRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMT 135

[Close]

BLAST of Carg19108 vs. TAIR10
Match: AT4G28170.1 (unknown protein)

HSP 1 Score: 77.4 bits (189), Expect = 8.3e-15
Identity = 48/104 (46.15%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 25  EEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFL----RPRTAADMGRPPSDLEAQ 84
           EE   RF+ SVNAV FG VAT +LI++FL++A FERF+     P    D   PP      
Sbjct: 51  EEGQGRFESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPTPSPPLDQKFPP------ 110

Query: 85  MVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPAPCPP 125
                   + SPKM V  R +SVLMPGE +PT+IA     PCPP
Sbjct: 111 --------FASPKMDVCKREISVLMPGEDVPTFIAQ----PCPP 136

[Close]

BLAST of Carg19108 vs. TAIR10
Match: AT1G09812.1 (unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-14
Identity = 50/120 (41.67%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 19  PLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRTAA-------DMG 78
           P   + E  W R   S+NA+SFGFVATAILISMFL+MAIFE   RP  ++          
Sbjct: 12  PREGDSEGPW-RSSTSMNAISFGFVATAILISMFLIMAIFEHLFRPENSSFDSPHQIRQR 71

Query: 79  RPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPAPCPPEPILKPL 132
           +     + Q + D+    P   +      VSV+MPGE +P++IA P P PC  E I  PL
Sbjct: 72  QRDGSSQFQKLADQASMVPVSTVV----DVSVVMPGEKLPSHIALPAPLPCRREGIHWPL 126

[Close]

BLAST of Carg19108 vs. TAIR10
Match: AT1G58007.1 (unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-12
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 34  SVNAVSFGFVATAILISMFLVMAIFERFLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPK 93
           S+NA+SFGFVATAILI MF++MAI E   R   ++       D++    F +KL   +  
Sbjct: 22  SMNAISFGFVATAILILMFIIMAILEHLFRSDHSSSY-----DVDDSSQF-QKLAEKASM 81

Query: 94  MTVYGRGVSVLMPGEAIPTYIAHPVPAPCPPEPILKPLH 133
           + V    VSV+MPG+ +P+Y+A P P PC  E I  P H
Sbjct: 82  VPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114

[Close]

BLAST of Carg19108 vs. TrEMBL
Match: tr|A0A0A0K2A7|A0A0A0K2A7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047290 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.2e-69
Identity = 133/151 (88.08%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQ+WG IAP LPAV PLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR+ A +GRPPSDLEAQMVFD K RYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMVFDGKPRYPSPKMTVYARGVSVLMPGEEIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH H+LS+CP SSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHQHSLSMCPSSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. TrEMBL
Match: tr|F6HIH2|F6HIH2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g01900 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-46
Identity = 103/147 (70.07%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGE  WG ++P + AV  +N EREE+W  FD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGE-SWGMVSPTV-AVAAVNVEREEHWKHFDNSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR++    R   D EA M+FD KLRYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSSPSGSRTHGDPEAPMMFDGKLRYPSPKMTVYARGVSVLMPGEQIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTS 148
           PCPPE I +PLH H  S C P S  +S
Sbjct: 121 PCPPERIARPLHQH--SPCQPISFFSS 143

[Close]

BLAST of Carg19108 vs. TrEMBL
Match: tr|A5AET9|A5AET9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034449 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.5e-46
Identity = 98/135 (72.59%), Postives = 109/135 (80.74%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGE  WG ++P + AV  +N EREE+W  FD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGE-SWGMVSPTV-AVAAVNVEREEHWKHFDNSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR++    R   D EA M+FD KLRYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSSPSGSRTHGDPEAPMMFDGKLRYPSPKMTVYARGVSVLMPGEQIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHN 136
           PCPPE I +PLH H+
Sbjct: 121 PCPPERIARPLHQHS 133

[Close]

BLAST of Carg19108 vs. TrEMBL
Match: tr|V4U3R6|V4U3R6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017068mg PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 101/149 (67.79%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           M GE     +  P P + PLN EREE+W RFD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 4   MNGEDHSSWLMAP-PPMAPLNMEREEHWRRFDNSVNAVSFGFVATAILISMFLVMAIFER 63

Query: 61  FLRPRTAADMG-RPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVP 120
           FLRPR++   G    SDLEAQM+F+ KL YPSPKMTVY +GVSVLMPGE IPT+IAHP P
Sbjct: 64  FLRPRSSMPPGPSSASDLEAQMMFNGKLNYPSPKMTVYAKGVSVLMPGEQIPTFIAHPAP 123

Query: 121 APCPPEPILKPLHPHNLSICPPSSLTTSS 149
           APCPPE IL+PLH +N S    SSL  ++
Sbjct: 124 APCPPERILQPLHQYNQSFNFTSSLVENN 151

[Close]

BLAST of Carg19108 vs. TrEMBL
Match: tr|A0A2H5PTK3|A0A2H5PTK3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_166240 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 101/149 (67.79%), Postives = 115/149 (77.18%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           M GE     +  P P + PLN EREE+W RFD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 4   MNGEDHSSWLMAP-PPMAPLNMEREEHWRRFDNSVNAVSFGFVATAILISMFLVMAIFER 63

Query: 61  FLRPRTAADMG-RPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVP 120
           FLRPR++   G    SDLEAQM+F+ KL YPSPKMTVY +GVSVLMPGE IPT+IAHP P
Sbjct: 64  FLRPRSSMPPGPSSASDLEAQMMFNGKLNYPSPKMTVYAKGVSVLMPGEQIPTFIAHPAP 123

Query: 121 APCPPEPILKPLHPHNLSICPPSSLTTSS 149
           APCPPE IL+PLH +N S    SSL  ++
Sbjct: 124 APCPPERILQPLHQYNQSFNFTSSLVENN 151

The following BLAST results are available for this feature:

BLAST of Carg19108 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930795.1	3.6e-80	98.68	uncharacterized protein LOC111437169 isoform X1 [Cucurbita moschata]	[more]
XP_023531017.1	4.7e-80	98.68	uncharacterized protein LOC111793399 [Cucurbita pepo subsp. pepo]	[more]
XP_022988986.1	5.2e-79	98.01	uncharacterized protein LOC111486185 isoform X1 [Cucurbita maxima]	[more]
XP_004137014.1	6.3e-69	88.08	PREDICTED: uncharacterized protein LOC101213979 [Cucumis sativus] >KGN43593.1 hy...	[more]
XP_022969286.1	1.9e-65	83.44	uncharacterized protein LOC111468338 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg19108 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11120.1	1.6e-21	47.89	unknown protein	[more]
AT4G28170.1	8.3e-15	46.15	unknown protein	[more]
AT1G09812.1	5.4e-14	41.67	unknown protein	[more]
AT1G58007.1	1.7e-12	43.43	unknown protein	[more]

BLAST of Carg19108 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19108 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2A7\|A0A0A0K2A7_CUCSA	4.2e-69	88.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047290 PE=4 SV=1	[more]
tr\|F6HIH2\|F6HIH2_VITVI	2.9e-46	70.07	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g01900 PE=4 SV=...	[more]
tr\|A5AET9\|A5AET9_VITVI	6.5e-46	72.59	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034449 PE=4 SV=1	[more]
tr\|V4U3R6\|V4U3R6_9ROSI	1.2e-44	67.79	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017068mg PE=4 ...	[more]
tr\|A0A2H5PTK3\|A0A2H5PTK3_CITUN	1.2e-44	67.79	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_166240 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19108-RA	Carg19108-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33728	FAMILY NOT NAMED	coord: 5..146
None	No IPR available	PANTHER	PTHR33728:SF1	SUBFAMILY NOT NAMED	coord: 5..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19108	Cla007736	Watermelon (97103) v1	carwmB0718
Carg19108	Csa7G047290	Cucumber (Chinese Long) v2	carcuB0739
Carg19108	MELO3C018754	Melon (DHL92) v3.5.1	carmeB0715
Carg19108	ClCG02G001210	Watermelon (Charleston Gray)	carwcgB0696
Carg19108	CSPI07G04420	Wild cucumber (PI 183967)	carcpiB0755
Carg19108	Cucsa.147860	Cucumber (Gy14) v1	carcgyB0810
Carg19108	Cucsa.126400	Cucumber (Gy14) v1	carcgyB0809
Carg19108	CmaCh18G003500	Cucurbita maxima (Rimu)	carcmaB1007
Carg19108	CmaCh19G009750	Cucurbita maxima (Rimu)	carcmaB1008
Carg19108	CmaCh11G018640	Cucurbita maxima (Rimu)	carcmaB1006
Carg19108	CmoCh11G019410	Cucurbita moschata (Rifu)	carcmoB0979
Carg19108	CmoCh18G003280	Cucurbita moschata (Rifu)	carcmoB0980
Carg19108	Lsi11G015290	Bottle gourd (USVL1VR-Ls)	carlsiB659
Carg19108	Cp4.1LG04g03290	Cucurbita pepo (Zucchini)	carcpeB1015
Carg19108	Cp4.1LG09g08550	Cucurbita pepo (Zucchini)	carcpeB1012
Carg19108	Cp4.1LG15g07970	Cucurbita pepo (Zucchini)	carcpeB1013
Carg19108	CsGy7G004030	Cucumber (Gy14) v2	carcgybB0717
Carg19108	MELO3C018754.2	Melon (DHL92) v3.6.1	carmedB0728
Carg19108	CsaV3_7G004240	Cucumber (Chinese Long) v3	carcucB0758
Carg19108	Cla97C02G027630	Watermelon (97103) v2	carwmbB0752
Carg19108	Bhi05G001587	Wax gourd	carwgoB0847

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19108	Carg14648	Silver-seed gourd	carcarB176
Carg19108	Carg19223	Silver-seed gourd	carcarB590

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19108	Watermelon (Charleston Gray)	carwcgB0695
Carg19108	Watermelon (97103) v1	carwmB0719
Carg19108	Watermelon (97103) v2	carwmbB0751
Carg19108	Wax gourd	carwgoB0849
Carg19108	Silver-seed gourd	carcarB035
Carg19108	Cucurbita maxima (Rimu)	carcmaB1010
Carg19108	Cucurbita moschata (Rifu)	carcmoB0981
Carg19108	Cucurbita moschata (Rifu)	carcmoB0983
Carg19108	Cucurbita pepo (Zucchini)	carcpeB1016
Carg19108	Bottle gourd (USVL1VR-Ls)	carlsiB657