Lsi11G015290 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G015290
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_91
Locationchr11 : 23672285 .. 23676199 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTAGTATATTTTTAAAATAAAATAAAATTAAAAAAAAAATCTCTTTTTGATTTTCTCAATATTTACTAAAGAAATCATCATCATCACTCAGCCCAACAACAAAAAGTCCTTTGTTTTCTTTCTTTTTGAAAGCAACGTTAAAAGAGGCCTTCCTCTGGAAAACTGATATAGCAATTGAGTTGAGAGACAAACACACACTCACATTTCGTAAATAAAGCCTGCAAACGATCTTCTCTTCTGCAAAATCTCCATTTCTTCCCTCCTTTCATATTCTTTCTTCTTTGCTCTGATTATCTCACTGCACATGGCTTTTGAATCACAGGTCTTAATGTAATCATTTTACCCATCTTCTTTTTACAACCCAATTTCCCTTTCTCTAAAAACCCTCCATTCTCTGCAACTATCACCCTTGCCATTATTAGAAGTTCTAGCACGAGAGCAAAAACAGAGTGGGTTTTTTTTCTTTTTTTTTTTTGTTATTACTCTTCTGGGGTTTGGTTTTAATGGGAGGTGAGCAAAAATGGGGGGCTATAGCGCCGGCGTTACCGGCGGTGTCACCGTTAAACCCAGAAAGAGAGGAGTATTGGAGCCGTTTTGATGATTCGGTTAATGCGGTGTCGTTTGGGTTTGTAGCTACTGCCATTCTCATCTCTATGTTCCTTGTTATGGCAATTTTTGAGAGGTTTCTAAGACCCAGATCGCCTGCGGCCATGGGACGGCCGCCTTCTGATCTTGAAGCTCAGATGGTGTTCGATGGAAAGCCTCGTTACCCATCTCCTAAGGTTTTTGTCTTCTCTTTTCTCCAACTGCATTTTGTTTGCTCTTCTAAATTATGATTCATGTGTCTTCTTAGTTGTTTTGCTTTGAGTTTTCTTTTAGCTGATTTAAGGCTTGATAGGTAAGTTGTAAAGCTTATTTGTTTGTGTATATGATTTCATTATCTTCAAGAATAATGGCATAGCTTGTTGGCTGTTAGTTCCTCTAGTGCGCTGAATTATTGGTCTAACTAATTATGAGCTGTTTTGTTGTATTTCAAATCTAAGCATGAAACTCTTTTGAACTTTTAAGACCCTGGAAAATCATATTCTCCACCATCTTACAACATTGCAAGTTTATTTGTTTATCATCTTTTGAATAAATGAATCCTATGCCATTTTTCTTAAGCTTTAGAGTTGTAGATGTTGTATAATATTTGTTTGTTATGGAAGTTTGTTGTGGGGCCTTAAGAGTTATAATCTTATGGTGTTACTAATCTTGAGATTCTAATTTAATGGCTTCTGCTTTACTTTAGAAACATTATTTGTTCGCAAGGTGATAAGATCATCACGAGTGACATCTAATTTTGTGCATCCCACCAAATTGTCTAATCATAATTTGTTCATGACAAGTTCTTTTTTTAAATATATTAATTTAATTTTTATGTATGTGATGAGAGTGAGATGCATAAAGATGAACGCATCTTGAAACGCATTCAAGTATGACTCACAGTTTTATCTCTTTATGCCCAAAAGCCATCCTTAAAAGGATCACCTTTTTTAGAAAAGAAATATAAAATAAAATAAAATAAATCCAAAAAAGACCAAAAGGCTTAGGGGTCATGGATTCAATCCATGGTGGTCATCTACCTAGGAGTTAATATTCTACATGTTTCCTTGACACCCAAATGTTGTAGAATCAGGCGGGTTGTCCCATAAGATTAGTCGAGGTGTGCGTAAGCTGGCCCAAATATTCACTGATATAAAATAATAATAATAATAATAAATAAATAAATAAACAAATTATTTTGTTGACGATTAATAATGTTTGAACTACTTTCAAACAGTTCTCTTCTGAAAATTTCTATATTACCTCTGTTTGTTAACATTAATACAATAGTTTACCTCATTCTAGATTTTAAGGATAAGGGTCCACAGCATGTAGGTAGCATGTGTTTTTGTCTCAACTGTTATAGCAATCCAACCAGAATAAAATTTGATAGGCAAAACGCATCCAGAAGGCTTTAAAATGTGCAAACTGCTCTTAATTTTTTAAGCATTAGTTGCTTGTGAAGCTGTGCCAAATGACATTTTAAAAGAACAGATTATTCAAAGTTATCTCGATGTAACAAACTTTGTCAACAATTTGATCCTACACCATTAAATGCATTGTTCATATCAAGCAAGATATAGCACAACTGTTCATAAGCCTTTAAGTGCAGTAGCAAGTTAATTACAAACATAATCACATGCTATGTTTCCCTTTCTGATTACAGTATAGTAATGTGCACATATTTTTAAGTATTTTTTTTTTTTTTTAGCTTTATAAAGTATCTCAAAGTCTCGGCTGGCACTATTTTCAATATCTTTTCCTACATTCTATGAGGTATACTTGTACCATACCAACATGTACAGCTGAGTTTGGTTGGGAGAGTATTCAAAGATTTGAGTAATACTTTCATTTTTATTGTGTTGGGAAAAATACTAACAGAGTAGAAGGGTATTGAAATAGGAGGTCCTGGATCATTCAGAATCTACTTCCACTAGTTTATGTCCTATTCTTGTATCTCAAGTATGATAAAGTTGTCCTCCTTTTTGCTTATAGGCCAGCTATTTTCAACTGAAAATCAGAATGGTGATCATTATTATGAGTTTTCTTTCTTGTTTGAGGACATTTGCTTTTAGTGACCATCATGTTTGATCATGTGGCTTATCTTTCTCTTCACAAGGGGAAAGAAAGGCAAAAGAAAAAGGGAAAAAAGGTTCAGACAAGCATTAATGTTCTATTGGAGTGAGGTTTTGATTCATCTATCTTTTAATCAAATTTATAATTCTATACTGTTCAATCAACAGTGGCTGTACAGTGTTCAAGTCATTAAAATCTCTCTCTCTCTCTTCCTTTGATGAACAATATGCTACAGAATTCTCATGCAAAGAAAAAAAAACCTTCTTTATTGCGTCTGTCAAACATGCCTAATCATTTCTGGACTATGACCTTTTGCACCATTGCTGCTGAAATTTTGCAGCATTCTCAGAACCATGATATTAGTAGCTATAGATGCTTTCTGTAATGTAATATACTTATATTGATAATTAGATGAATAGCAGAGAAGCAAATTTTAGCTTTATTTTGTACCATTGGGATTGACTGGTTCATTCTTTTTCACTTGATTTACTTAGATGACAGTTTACGCTCGGGGAGTATCCGTATTGATGCCTGGTGAAGAAATTCCTACCTACATTGCTCATCCTGCTCCTGCACCTTGTCCTCCAGAACCCATTTTGAAGCCTCTGCATCAACATGGCTTGAGCATCTGTCCATCATCAAGCTTAACATCAAGCTCCAACATCAGTTGACCTGAAAAATAACATCACTATAGAACAAGGATCACCCCACACTTGGAATTTCAGCTTATTCTGACTTGCTACTTGACATTCTAAAGTTGGAAAACATGGTGAAAGTCACATCAACTTCAGTCTCTAACTTCAATACGTAGAGAGGCCCTGTAGGTTATATTTGATGATGTTGATTTGGGCCTTCTCTTGCCCCCACCAAATTAAAGAGAGGAAGAAAATGAATGATTGTTGCAAGCTGGGTCAGCTCCTGTAATCCATGATTAGTACCCTGATTGTTATGTTCATAATGAATCCCACGCCTCTTTCACTGACATCAAAGTTACAACATATAGTTAATTATCCACATAATTCTACTACCAACCGTGAAAAGAAGTAAAACGTCAGCATCGATAACACAGATTAAGGAAGAAAAGTAACAGAAGAAGATGACCATTTAAAGTTCTCAATACTGCATCATCTTACATAATGGTCATTGTTATCAGCATTTGTAAAAGAATTATACTGGTTTTCTGTGGGCTCTTTCATTTTTACTTCCTTATAGGGCATTAACAGCACAATATTAACAGAAATCTTCGTGCAAA

mRNA sequence

AAGTAGTATATTTTTAAAATAAAATAAAATTAAAAAAAAAATCTCTTTTTGATTTTCTCAATATTTACTAAAGAAATCATCATCATCACTCAGCCCAACAACAAAAAGTCCTTTGTTTTCTTTCTTTTTGAAAGCAACGTTAAAAGAGGCCTTCCTCTGGAAAACTGATATAGCAATTGAGTTGAGAGACAAACACACACTCACATTTCGTAAATAAAGCCTGCAAACGATCTTCTCTTCTGCAAAATCTCCATTTCTTCCCTCCTTTCATATTCTTTCTTCTTTGCTCTGATTATCTCACTGCACATGGCTTTTGAATCACAGGTCTTAATGTAATCATTTTACCCATCTTCTTTTTACAACCCAATTTCCCTTTCTCTAAAAACCCTCCATTCTCTGCAACTATCACCCTTGCCATTATTAGAAGTTCTAGCACGAGAGCAAAAACAGAGTGGGTTTTTTTTCTTTTTTTTTTTTGTTATTACTCTTCTGGGGTTTGGTTTTAATGGGAGGTGAGCAAAAATGGGGGGCTATAGCGCCGGCGTTACCGGCGGTGTCACCGTTAAACCCAGAAAGAGAGGAGTATTGGAGCCGTTTTGATGATTCGGTTAATGCGGTGTCGTTTGGGTTTGTAGCTACTGCCATTCTCATCTCTATGTTCCTTGTTATGGCAATTTTTGAGAGGTTTCTAAGACCCAGATCGCCTGCGGCCATGGGACGGCCGCCTTCTGATCTTGAAGCTCAGATGGTGTTCGATGGAAAGCCTCGTTACCCATCTCCTAAGCTTTATAAAGTATCTCAAAGTCTCGGCTGGCACTATTTTCAATATCTTTTCCTACATTCTATGAGCATTCTCAGAACCATGATATTAGTAGCTATAGATGCTTTCTGTAATATGACAGTTTACGCTCGGGGAGTATCCGTATTGATGCCTGGTGAAGAAATTCCTACCTACATTGCTCATCCTGCTCCTGCACCTTGTCCTCCAGAACCCATTTTGAAGCCTCTGCATCAACATGGCTTGAGCATCTGTCCATCATCAAGCTTAACATCAAGCTCCAACATCAGTTGACCTGAAAAATAACATCACTATAGAACAAGGATCACCCCACACTTGGAATTTCAGCTTATTCTGACTTGCTACTTGACATTCTAAAGTTGGAAAACATGGTGAAAGTCACATCAACTTCAGTCTCTAACTTCAATACGTAGAGAGGCCCTGTAGGTTATATTTGATGATGTTGATTTGGGCCTTCTCTTGCCCCCACCAAATTAAAGAGAGGAAGAAAATGAATGATTGTTGCAAGCTGGGTCAGCTCCTGTAATCCATGATTAGTACCCTGATTGTTATGTTCATAATGAATCCCACGCCTCTTTCACTGACATCAAAGTTACAACATATAGTTAATTATCCACATAATTCTACTACCAACCGTGAAAAGAAGTAAAACGTCAGCATCGATAACACAGATTAAGGAAGAAAAGTAACAGAAGAAGATGACCATTTAAAGTTCTCAATACTGCATCATCTTACATAATGGTCATTGTTATCAGCATTTGTAAAAGAATTATACTGGTTTTCTGTGGGCTCTTTCATTTTTACTTCCTTATAGGGCATTAACAGCACAATATTAACAGAAATCTTCGTGCAAA

Coding sequence (CDS)

ATGGGAGGTGAGCAAAAATGGGGGGCTATAGCGCCGGCGTTACCGGCGGTGTCACCGTTAAACCCAGAAAGAGAGGAGTATTGGAGCCGTTTTGATGATTCGGTTAATGCGGTGTCGTTTGGGTTTGTAGCTACTGCCATTCTCATCTCTATGTTCCTTGTTATGGCAATTTTTGAGAGGTTTCTAAGACCCAGATCGCCTGCGGCCATGGGACGGCCGCCTTCTGATCTTGAAGCTCAGATGGTGTTCGATGGAAAGCCTCGTTACCCATCTCCTAAGCTTTATAAAGTATCTCAAAGTCTCGGCTGGCACTATTTTCAATATCTTTTCCTACATTCTATGAGCATTCTCAGAACCATGATATTAGTAGCTATAGATGCTTTCTGTAATATGACAGTTTACGCTCGGGGAGTATCCGTATTGATGCCTGGTGAAGAAATTCCTACCTACATTGCTCATCCTGCTCCTGCACCTTGTCCTCCAGAACCCATTTTGAAGCCTCTGCATCAACATGGCTTGAGCATCTGTCCATCATCAAGCTTAACATCAAGCTCCAACATCAGTTGA

Protein sequence

MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTMILVAIDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSSSLTSSSNIS
Homology
[Close]
BLAST of Lsi11G015290 vs. TrEMBL
Match: A0A0A0K2A7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047290 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-53
Identity = 123/188 (65.43%), Postives = 129/188 (68.62%), Query Frame = 1 

Query: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTM 120
           FLRPRSPAA+GRPPSDLEAQMVFDGKPRYPSPK                    M++    
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMVFDGKPRYPSPK--------------------MTVYARG 120

Query: 121 ILVAIDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSSS 180
           + V +      T  A       P                 PEPILKPLHQH LS+CPSSS
Sbjct: 121 VSVLMPGEEIPTYIAHPAPAPCP-----------------PEPILKPLHQHSLSMCPSSS 151

Query: 181 LTSSSNIS 189
           LTSSSNIS
Sbjct: 181 LTSSSNIS 151

[Close]
BLAST of Lsi11G015290 vs. TrEMBL
Match: A0A061E3Z4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007987 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.8e-34
Identity = 89/175 (50.86%), Postives = 106/175 (60.57%), Query Frame = 1 

Query: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MG +  W  + P    V+PLN EREE+W RFD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGAQDYWDTVPPT---VAPLNLEREEHWRRFDNSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTM 120
           FLRPRS ++  R  +DLE+Q  F+GK  YPSPK+              ++ + +S+L   
Sbjct: 61  FLRPRSLSSNARNRTDLESQTTFNGKLDYPSPKM-------------TIYANGVSVLM-- 120

Query: 121 ILVAIDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSI 176
                                 PGEE PT+IAHPAPAPCPPE ILKPL     SI
Sbjct: 121 ----------------------PGEETPTFIAHPAPAPCPPERILKPLLHQNQSI 135

[Close]
BLAST of Lsi11G015290 vs. TrEMBL
Match: F6HIH2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01900 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.8e-30
Identity = 91/184 (49.46%), Postives = 105/184 (57.07%), Query Frame = 1 

Query: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGE  WG ++P + AV+ +N EREE+W  FD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGES-WGMVSPTV-AVAAVNVEREEHWKHFDNSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTM 120
           F               L  +    G   +  P+   +         +Y            
Sbjct: 61  F---------------LRPRSSPSGSRTHGDPEAPMMFDGK----LRY------------ 120

Query: 121 ILVAIDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSSS 180
                     MTVYARGVSVLMPGE+IPTYIAHPAPAPCPPE I +PLHQH  S C   S
Sbjct: 121 ------PSPKMTVYARGVSVLMPGEQIPTYIAHPAPAPCPPERIARPLHQH--SPCQPIS 143

Query: 181 LTSS 185
             SS
Sbjct: 181 FFSS 143

[Close]
BLAST of Lsi11G015290 vs. TrEMBL
Match: A0A067E6G0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041962mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-29
Identity = 87/173 (50.29%), Postives = 104/173 (60.12%), Query Frame = 1 

Query: 13  ALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAAMGR 72
           A P ++PLN EREE+W RFD+SVNAVSFGFVATAILISMFLVMAIFERFL          
Sbjct: 12  APPPMAPLNMEREEHWRRFDNSVNAVSFGFVATAILISMFLVMAIFERFL---------- 71

Query: 73  PPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTMILVAIDAFCNMT 132
                        +PR   P     +  L     Q +F   ++               MT
Sbjct: 72  -------------RPRSSMPPGPSSASDLE---AQMMFNGKLNYPSP----------KMT 131

Query: 133 VYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSSSLTSSS 186
           VYA+GVSVLMPGE+IPT+IAHPAPAPCPPE IL+PLHQ+  S   +SSL  ++
Sbjct: 132 VYAKGVSVLMPGEQIPTFIAHPAPAPCPPERILQPLHQYNQSFNFTSSLVENN 148

[Close]
BLAST of Lsi11G015290 vs. TrEMBL
Match: V4U3R6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017068mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-29
Identity = 87/173 (50.29%), Postives = 104/173 (60.12%), Query Frame = 1 

Query: 13  ALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAAMGR 72
           A P ++PLN EREE+W RFD+SVNAVSFGFVATAILISMFLVMAIFERFL          
Sbjct: 15  APPPMAPLNMEREEHWRRFDNSVNAVSFGFVATAILISMFLVMAIFERFL---------- 74

Query: 73  PPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTMILVAIDAFCNMT 132
                        +PR   P     +  L     Q +F   ++               MT
Sbjct: 75  -------------RPRSSMPPGPSSASDLE---AQMMFNGKLNYPSP----------KMT 134

Query: 133 VYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSSSLTSSS 186
           VYA+GVSVLMPGE+IPT+IAHPAPAPCPPE IL+PLHQ+  S   +SSL  ++
Sbjct: 135 VYAKGVSVLMPGEQIPTFIAHPAPAPCPPERILQPLHQYNQSFNFTSSLVENN 151

[Close]
BLAST of Lsi11G015290 vs. TAIR10
Match: AT1G11120.1 (AT1G11120.1 unknown protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32
Identity = 87/176 (49.43%), Postives = 112/176 (63.64%), Query Frame = 1 

Query: 15  PAVSPLNPEREEYW-SRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRP------RSP 74
           P  +P+N  REE W S+FDDSVNAVSFGFVATAILISMFLVMAIFER +R        S 
Sbjct: 17  PIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTNSD 76

Query: 75  AAMGRPPSDLEAQMVFDG---KPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTMILVA 134
           ++  R    +++++ F+G   K  Y SPK             + +F  S +IL++ + + 
Sbjct: 77  SSSSRVLPGMDSRVGFNGAATKLGYQSPKASNN---------RIVFSFSFNILKSELFIV 136

Query: 135 IDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSSS 181
           I     MTVY+ GVSVLMPG++IPT+IAHPAP PCPP+ I +  HQHG S   SSS
Sbjct: 137 I--ILRMTVYSNGVSVLMPGDDIPTFIAHPAPVPCPPQNISQSQHQHGSSKDSSSS 181

[Close]
BLAST of Lsi11G015290 vs. TAIR10
Match: AT1G09812.1 (AT1G09812.1 unknown protein)

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13
Identity = 56/151 (37.09%), Postives = 74/151 (49.01%), Query Frame = 1 

Query: 18  SPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAAMGRPPSDL 77
           SP   + E  W R   S+NA+SFGFVATAILISMFL+MAIFE   RP + +         
Sbjct: 11  SPREGDSEGPW-RSSTSMNAISFGFVATAILISMFLIMAIFEHLFRPENSS--------- 70

Query: 78  EAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTMILVAIDAFCNMTVYARG 137
                      + SP   +  Q  G   FQ L   +  +  + ++               
Sbjct: 71  -----------FDSPHQIRQRQRDGSSQFQKLADQASMVPVSTVV--------------D 126

Query: 138 VSVLMPGEEIPTYIAHPAPAPCPPEPILKPL 169
           VSV+MPGE++P++IA PAP PC  E I  PL
Sbjct: 131 VSVVMPGEKLPSHIALPAPLPCRREGIHWPL 126

[Close]
BLAST of Lsi11G015290 vs. TAIR10
Match: AT4G28170.1 (AT4G28170.1 unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 1 

Query: 25  EEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAAMGRPPSDLEAQMVFD 84
           EE   RF+ SVNAV FG VAT +LI++FL++A FERF+  +   +   PP D +      
Sbjct: 51  EEGQGRFESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPTPS---PPLDQKF----- 110

Query: 85  GKPRYPSPKL 95
             P + SPK+
Sbjct: 111 --PPFASPKM 110

[Close]
BLAST of Lsi11G015290 vs. NCBI nr
Match: gi|449438476|ref|XP_004137014.1| (PREDICTED: uncharacterized protein LOC101213979 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 4.1e-53
Identity = 123/188 (65.43%), Postives = 129/188 (68.62%), Query Frame = 1 

Query: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTM 120
           FLRPRSPAA+GRPPSDLEAQMVFDGKPRYPSPK                    M++    
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMVFDGKPRYPSPK--------------------MTVYARG 120

Query: 121 ILVAIDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSSS 180
           + V +      T  A       P                 PEPILKPLHQH LS+CPSSS
Sbjct: 121 VSVLMPGEEIPTYIAHPAPAPCP-----------------PEPILKPLHQHSLSMCPSSS 151

Query: 181 LTSSSNIS 189
           LTSSSNIS
Sbjct: 181 LTSSSNIS 151

[Close]
BLAST of Lsi11G015290 vs. NCBI nr
Match: gi|590690506|ref|XP_007043526.1| (Uncharacterized protein TCM_007987 [Theobroma cacao])

HSP 1 Score: 152.9 bits (385), Expect = 5.5e-34
Identity = 89/175 (50.86%), Postives = 106/175 (60.57%), Query Frame = 1 

Query: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MG +  W  + P    V+PLN EREE+W RFD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGAQDYWDTVPPT---VAPLNLEREEHWRRFDNSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRTM 120
           FLRPRS ++  R  +DLE+Q  F+GK  YPSPK+              ++ + +S+L   
Sbjct: 61  FLRPRSLSSNARNRTDLESQTTFNGKLDYPSPKM-------------TIYANGVSVLM-- 120

Query: 121 ILVAIDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSI 176
                                 PGEE PT+IAHPAPAPCPPE ILKPL     SI
Sbjct: 121 ----------------------PGEETPTFIAHPAPAPCPPERILKPLLHQNQSI 135

[Close]
BLAST of Lsi11G015290 vs. NCBI nr
Match: gi|590624871|ref|XP_007025726.1| (Uncharacterized protein TCM_029945 [Theobroma cacao])

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 97/205 (47.32%), Postives = 121/205 (59.02%), Query Frame = 1 

Query: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MG E+++    P  P  +PLN +RE++W  FD+SVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGQEERYFYSWP--PVGAPLNVQREDHWRHFDNSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLF---------- 120
           FLRP S    GR   DLE+Q+ F+GK  +PSPK     +S G     +L           
Sbjct: 61  FLRPNSSHG-GRNHGDLESQLGFNGKLSHPSPKAMSHLRSEGSAEVDWLVPDQRVQQIDG 120

Query: 121 ----------LHSMSILRTMILVAIDAFC-----NMTVYARGVSVLMPGEEIPTYIAHPA 180
                     LH   +   +   A+ + C      MT+Y  GVSVLMPG+EIPT+IAHPA
Sbjct: 121 TPDFVLKDPCLHPGILRHNVPGGALSSSCWGTLKLMTIYTSGVSVLMPGDEIPTFIAHPA 180

[Close]
BLAST of Lsi11G015290 vs. NCBI nr
Match: gi|743892788|ref|XP_011039756.1| (PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica])

HSP 1 Score: 139.0 bits (349), Expect = 8.2e-30
Identity = 88/187 (47.06%), Postives = 110/187 (58.82%), Query Frame = 1 

Query: 1   MGGEQKWGAI-APALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFE 60
           MG E  W  + +P    + PLN ER+++W  FD+SVNAVSFGFVATAILISMFLVMAIFE
Sbjct: 1   MGVEDSWDTVVSPPTATLVPLNLERDDHWRHFDNSVNAVSFGFVATAILISMFLVMAIFE 60

Query: 61  RFLRPRSPAAMGRPPSDLEAQMVFDGKPRYPSPKLYKVSQSLGWHYFQYLFLHSMSILRT 120
           RFLRPRS          L +    +G     S  L            Q +F   +     
Sbjct: 61  RFLRPRS----------LSSSAGANGSSSSSSNDLEA----------QVVFHGKLDFPSP 120

Query: 121 MILVAIDAFCNMTVYARGVSVLMPGEEIPTYIAHPAPAPCPPEPILKPLHQHGLSICPSS 180
                      MTVYA GVSVLMPG+++PT++AHPAPAPC PE I++PL QH  S+C S 
Sbjct: 121 ----------KMTVYAEGVSVLMPGDDVPTFLAHPAPAPCRPERIIQPLQQH--SLCHSY 155

Query: 181 SLTSSSN 187
           + TS+S+
Sbjct: 181 TSTSTSS 155

[Close]
BLAST of Lsi11G015290 vs. NCBI nr
Match: gi|659111033|ref|XP_008455542.1| (PREDICTED: uncharacterized protein LOC103495693, partial [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 8.2e-30
Identity = 89/158 (56.33%), Postives = 95/158 (60.13%), Query Frame = 1 

Query: 31  FDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAAMGRPPSDLEAQMVFDGKPRYP 90
           FDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAA+GRPPSDLEAQMVFDGKPRYP
Sbjct: 1   FDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRSPAAIGRPPSDLEAQMVFDGKPRYP 60

Query: 91  SPKLYKVSQSLGWHYFQYLFLHSMSILRTMILVAIDAFCNMTVYARGVSVLMPGEEIPTY 150
           SPK                    M++    + V +      T  A       P       
Sbjct: 61  SPK--------------------MTVYARGVSVLMPGEEIPTYIAHPAPAPCP------- 117

Query: 151 IAHPAPAPCPPEPILKPLHQHGLSICPSSSLTSSSNIS 189
                     PEPILKPLHQH LS+CPS    SSSNIS
Sbjct: 121 ----------PEPILKPLHQHSLSMCPS----SSSNIS 117

The following BLAST results are available for this feature:
BLAST of Lsi11G015290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi11G015290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2A7_CUCSA2.8e-5365.43Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047290 PE=4 SV=1[more]
A0A061E3Z4_THECC3.8e-3450.86Uncharacterized protein OS=Theobroma cacao GN=TCM_007987 PE=4 SV=1[more]
F6HIH2_VITVI9.8e-3049.46Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01900 PE=4 SV=... [more]
A0A067E6G0_CITSI2.2e-2950.29Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041962mg PE=4 SV=1[more]
V4U3R6_9ROSI2.2e-2950.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017068mg PE=4 SV=1[more]
BLAST of Lsi11G015290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11120.11.9e-3249.43 unknown protein[more]
AT1G09812.14.4e-1337.09 unknown protein[more]
AT4G28170.12.3e-0642.86 unknown protein[more]
BLAST of Lsi11G015290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438476|ref|XP_004137014.1|4.1e-5365.43PREDICTED: uncharacterized protein LOC101213979 [Cucumis sativus][more]
gi|590690506|ref|XP_007043526.1|5.5e-3450.86Uncharacterized protein TCM_007987 [Theobroma cacao][more]
gi|590624871|ref|XP_007025726.1|1.8e-3247.32Uncharacterized protein TCM_029945 [Theobroma cacao][more]
gi|743892788|ref|XP_011039756.1|8.2e-3047.06PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica][more]
gi|659111033|ref|XP_008455542.1|8.2e-3056.33PREDICTED: uncharacterized protein LOC103495693, partial [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G015290.1Lsi11G015290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33728FAMILY NOT NAMEDcoord: 131..188
score: 5.5E-71coord: 1..93
score: 5.5
NoneNo IPR availablePANTHERPTHR33728:SF1SUBFAMILY NOT NAMEDcoord: 131..188
score: 5.5E-71coord: 1..93
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G015290Csa7G047290Cucumber (Chinese Long) v2culsiB494
Lsi11G015290Csa1G073000Cucumber (Chinese Long) v2culsiB012
Lsi11G015290CSPI07G04420Wild cucumber (PI 183967)cpilsiB505
Lsi11G015290CSPI01G11750Wild cucumber (PI 183967)cpilsiB011
Lsi11G015290Cucsa.147860Cucumber (Gy14) v1cgylsiB237
Lsi11G015290CmaCh11G018640Cucurbita maxima (Rimu)cmalsiB091
Lsi11G015290CmaCh13G006650Cucurbita maxima (Rimu)cmalsiB198
Lsi11G015290CmaCh19G009750Cucurbita maxima (Rimu)cmalsiB472
Lsi11G015290CmoCh13G006850Cucurbita moschata (Rifu)cmolsiB188
Lsi11G015290CmoCh11G019410Cucurbita moschata (Rifu)cmolsiB080
Lsi11G015290Cla019469Watermelon (97103) v1lsiwmB093
Lsi11G015290Cla007736Watermelon (97103) v1lsiwmB100
Lsi11G015290MELO3C002568Melon (DHL92) v3.5.1lsimeB090
Lsi11G015290MELO3C018754Melon (DHL92) v3.5.1lsimeB095
Lsi11G015290ClCG02G001210Watermelon (Charleston Gray)lsiwcgB097
Lsi11G015290ClCG03G005650Watermelon (Charleston Gray)lsiwcgB104
Lsi11G015290MELO3C002568.2Melon (DHL92) v3.6.1lsimedB096
Lsi11G015290MELO3C018754.2Melon (DHL92) v3.6.1lsimedB101
Lsi11G015290Cla97C03G056960Watermelon (97103) v2lsiwmbB092
Lsi11G015290Cla97C02G027630Watermelon (97103) v2lsiwmbB086
Lsi11G015290Bhi05G001587Wax gourdlsiwgoB116
Lsi11G015290Cp4.1LG15g07970Cucurbita pepo (Zucchini)cpelsiB199
Lsi11G015290Cp4.1LG04g03290Cucurbita pepo (Zucchini)cpelsiB526
Lsi11G015290CsGy7G004030Cucumber (Gy14) v2cgyblsiB462
Lsi11G015290Carg19223Silver-seed gourdcarlsiB795
Lsi11G015290Carg19108Silver-seed gourdcarlsiB659
Lsi11G015290CsaV3_7G004240Cucumber (Chinese Long) v3cuclsiB529
Lsi11G015290CsaV3_1G011900Cucumber (Chinese Long) v3cuclsiB009
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi11G015290Lsi02G007140Bottle gourd (USVL1VR-Ls)lsilsiB049
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G015290Wax gourdlsiwgoB129
Lsi11G015290Bottle gourd (USVL1VR-Ls)lsilsiB024
Lsi11G015290Bottle gourd (USVL1VR-Ls)lsilsiB048
Lsi11G015290Cucumber (Gy14) v1cgylsiB021
Lsi11G015290Cucurbita maxima (Rimu)cmalsiB561
Lsi11G015290Cucurbita moschata (Rifu)cmolsiB457
Lsi11G015290Cucurbita moschata (Rifu)cmolsiB544
Lsi11G015290Cucurbita pepo (Zucchini)cpelsiB606
Lsi11G015290Wild cucumber (PI 183967)cpilsiB430
Lsi11G015290Melon (DHL92) v3.5.1lsimeB119
Lsi11G015290Watermelon (Charleston Gray)lsiwcgB089
Lsi11G015290Watermelon (Charleston Gray)lsiwcgB092
Lsi11G015290Watermelon (97103) v1lsiwmB099
Lsi11G015290Watermelon (97103) v1lsiwmB103
Lsi11G015290Melon (DHL92) v3.6.1lsimedB126
Lsi11G015290Silver-seed gourdcarlsiB028
Lsi11G015290Cucumber (Chinese Long) v3cuclsiB453
Lsi11G015290Watermelon (97103) v2lsiwmbB073
Lsi11G015290Watermelon (97103) v2lsiwmbB083