Carg14893 (gene) Silver-seed gourd

Overview
NameCarg14893
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_079 : 533050 .. 535707 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTCTATGTGCGTTGCCTACAGAACTCTTTTAAGGTACACTGGTCTTCTTCTCTGAGTCCATTTCAAACCCTAACTCCCAAGTTCTTAAACAAGTACAGTTCTTCCTCTTCTTCTGATTCGAGCACTTGTGCTTTTGATTATATTGCTCAATTTTTGCCTTCCAACGATGGTACTTTGAAATTGGTTTCTGTGAGTTCCGTCACTACGAATGACCGACGTAGAATCACTGTTGGGTTATCCAAAGCGATTAAGTTGTACCAGGGATACGCATTGAAGGAATTATCGAGAAATTTCTGCCCCTTTTTCTTGGTTAAGATTATGAAATTGTTTGAATGTCGGGAAACTGCGTTTGCGTTCTTCAAGCTAGCGTTTAATGACGATTGTGAAGAGACTGTAAGGTCTTGTTGTGTAGTGGCACATCTCTTAGCTGCAGAACGAATTTTTTTGCTCGCGCAAGATATTGTTTCGTGGATTTTTGCAAGAATTGGTCCACGTAGGAGCAAGGATTTGGCGGCATTTATGTGGGAAGGTCACTGTGAGTATGAATCTGACCTTTCAGTTTTGAACACTCTAATGCGGGCGTTTATGAAGTCGGAAATGCATTATGAGGCGTTAGAAATATTGAGTAAGATGCGGGAGGTGGGAGTGATGCCAAATGCATCCGCCATTTCCATTCTTTTTAGATTGCTGCTTAGAGCTGGTGATTATGGTGCTATATGGAAGTTGTTTCGGGACGTGGTTCGGAAGGGACCTCGCCCTAATAACTATATGTTTAACGTAATGATTCTTGAGTTTTGTAGAAAAGGTTGGAGTGTGATTGGAGAAGGTCTATTGCATGTAATGAGAAAATTTAGATGTGAACCAGATGTTTATTCGTATAATATTGTGATAAATGCAACCTGCTTAAGAGGGCAGTCATCAGATGCACTTCATTGGGTGAATATGATGATTGAAAACGGCTGTAAGCCCAGTATTGCTACATTCAGTATCGTCATTGATGCCTTCTGCAAGGAGGGAAACGTGGAGTTAGCTAGGAAAATCTTTGATGAAATTGAAGACATGGGTCTTTCTCATAATACTATAGTCTATAATAGCATGATAAGTGGGTATGTCAAGGCAAGAGACATTGGTCAAGCAAACTTGCTCTTTGAAGAAATGAGGACCAAGGATATAGTTCCTGATGGCATTACCTTTAATATATTGGTTGCTGGTCATTACAGATATGGAAGGGAGGAGGACGGGGATCGATTATTAAGGGATTTATCTGTGTCTGGGTTGCTTCATGATTCTTCCCTATGCGATGTAACCGTTGCAGGATTGTGCTGGGCAGGTAGATATGATGAGGCCATGAAGTTTCTAGAGGATTTACTTGAGAAAGGAATTCCTCCAAGTGTAGTAGCTTTTAATTCCATTATTGCAGCATACGGCAGTGCAGGTTTAGAAGAGAGAGCATTTTATGCTTATGGTACAATGACGAAATTTGGTTTAAGCCCTTCATCTTCCACATGTAGTTCCTTGCTTATCAGCTTAGTTAGGAAGGGGAGCCTTGATGATGCAAGGATAATTTTGTACGACATGATAGAAAAGGGATACCCTGTCAAGAACATGGCTTTTACAGGTCTTTTCGACGGGTACTTCAGAGTAGGAGATGTTAATACAGCTCAAAGTCTGTGGAATGAGATGAAGGGTAAGGGGGTGTTTCCCGACGCTGTTGCATTTGCAGCTTTCATTAACGGGCTCTGTATGTCGGGTTTGATGGAGGACGCTTATGATGTGTTCTCTAATATGTTGAGAAAAGGGTTTGTACCAAATAATTTTGTTTACAATTCCTTGATTGGTGGATTCTGTAGAGTGGGAAAACTAAATGAAGCCCTGAAATTGGAGAGAGAAATGAAGAAAAGAGGCCTTCTTCCCGATATTTTTACGACGAATATGATCATTGGTGGGTTATGCAAACAAGGTAGGATGAAGTTAGCAATTGAGACGTTCATGGACATGTATAGGATCGGTTTATCTCCTGATATTGTTACTTACAACACATTGATTGATGGTTACTGTAAAGCATTTGATATGGGTGGTGCAGATGATTTAGTGATGAAAATGTCGGATAGTGGGTGGGAACCTGATATCATGACTTATAATATACGAATTCATGGTTTCTGCACAGCCCGAAAAGTTAATCGGGCTGTACAGATACTAGAGGAACTTATTTCAGCTGGAGTAGTTCCGAATACTGTAACATACAATACCATGATTAATGCTGTCTGTAATGTCCTCCTGGACCATGCTATGATTTTAACTGCGAAATTGCTTAAGATGGCGTTTGTTCCAAACACTGTCACAGCAAACGTATTACTGTCTCAATTTTGTAAGCAAGGGATGCCTGAGAAAGCCATATTTTGGGGTCAGAAGTTGAGTGAGATTCGTGTTGATTTCGATGAAACGACACATAAAATAATGAACAGGGCCTACCATATTATACAAGAAGGTGGCGAGCATATAAATGCATCATATGAGAAAAGCGTCTTCATGGATTTTCTCATGTATATTACTTATGATTACTTCTGTAGAACTAAACCCTCACAAGAGAAAGATGAGAGCTTAGCTTTTAAAACTAGTTTCAGTCAGTTCAATAGGTTGATTGAGGTATAA

mRNA sequence

ATGTTTGTCTATGTGCGTTGCCTACAGAACTCTTTTAAGGTACACTGGTCTTCTTCTCTGAGTCCATTTCAAACCCTAACTCCCAAGTTCTTAAACAAGTACAGTTCTTCCTCTTCTTCTGATTCGAGCACTTGTGCTTTTGATTATATTGCTCAATTTTTGCCTTCCAACGATGGTACTTTGAAATTGGTTTCTGTGAGTTCCGTCACTACGAATGACCGACGTAGAATCACTGTTGGGTTATCCAAAGCGATTAAGTTGTACCAGGGATACGCATTGAAGGAATTATCGAGAAATTTCTGCCCCTTTTTCTTGGTTAAGATTATGAAATTGTTTGAATGTCGGGAAACTGCGTTTGCGTTCTTCAAGCTAGCGTTTAATGACGATTGTGAAGAGACTGTAAGGTCTTGTTGTGTAGTGGCACATCTCTTAGCTGCAGAACGAATTTTTTTGCTCGCGCAAGATATTGTTTCGTGGATTTTTGCAAGAATTGGTCCACGTAGGAGCAAGGATTTGGCGGCATTTATGTGGGAAGGTCACTGTGAGTATGAATCTGACCTTTCAGTTTTGAACACTCTAATGCGGGCGTTTATGAAGTCGGAAATGCATTATGAGGCGTTAGAAATATTGAGTAAGATGCGGGAGGTGGGAGTGATGCCAAATGCATCCGCCATTTCCATTCTTTTTAGATTGCTGCTTAGAGCTGGTGATTATGGTGCTATATGGAAGTTGTTTCGGGACGTGGTTCGGAAGGGACCTCGCCCTAATAACTATATGTTTAACGTAATGATTCTTGAGTTTTGTAGAAAAGGTTGGAGTGTGATTGGAGAAGGTCTATTGCATGTAATGAGAAAATTTAGATGTGAACCAGATGTTTATTCGTATAATATTGTGATAAATGCAACCTGCTTAAGAGGGCAGTCATCAGATGCACTTCATTGGGTGAATATGATGATTGAAAACGGCTGTAAGCCCAGTATTGCTACATTCAGTATCGTCATTGATGCCTTCTGCAAGGAGGGAAACGTGGAGTTAGCTAGGAAAATCTTTGATGAAATTGAAGACATGGGTCTTTCTCATAATACTATAGTCTATAATAGCATGATAAGTGGGTATGTCAAGGCAAGAGACATTGGTCAAGCAAACTTGCTCTTTGAAGAAATGAGGACCAAGGATATAGTTCCTGATGGCATTACCTTTAATATATTGGTTGCTGGTCATTACAGATATGGAAGGGAGGAGGACGGGGATCGATTATTAAGGGATTTATCTGTGTCTGGGTTGCTTCATGATTCTTCCCTATGCGATGTAACCGTTGCAGGATTGTGCTGGGCAGGTAGATATGATGAGGCCATGAAGTTTCTAGAGGATTTACTTGAGAAAGGAATTCCTCCAAGTGTAGTAGCTTTTAATTCCATTATTGCAGCATACGGCAGTGCAGGTTTAGAAGAGAGAGCATTTTATGCTTATGGTACAATGACGAAATTTGGTTTAAGCCCTTCATCTTCCACATGTAGTTCCTTGCTTATCAGCTTAGTTAGGAAGGGGAGCCTTGATGATGCAAGGATAATTTTGTACGACATGATAGAAAAGGGATACCCTGTCAAGAACATGGCTTTTACAGGTCTTTTCGACGGGTACTTCAGAGTAGGAGATGTTAATACAGCTCAAAGTCTGTGGAATGAGATGAAGGGTAAGGGGGTGTTTCCCGACGCTGTTGCATTTGCAGCTTTCATTAACGGGCTCTGTATGTCGGGTTTGATGGAGGACGCTTATGATGTGTTCTCTAATATGTTGAGAAAAGGGTTTGTACCAAATAATTTTGTTTACAATTCCTTGATTGGTGGATTCTGTAGAGTGGGAAAACTAAATGAAGCCCTGAAATTGGAGAGAGAAATGAAGAAAAGAGGCCTTCTTCCCGATATTTTTACGACGAATATGATCATTGGTGGGTTATGCAAACAAGGTAGGATGAAGTTAGCAATTGAGACGTTCATGGACATGTATAGGATCGGTTTATCTCCTGATATTGTTACTTACAACACATTGATTGATGGTTACTGTAAAGCATTTGATATGGGTGGTGCAGATGATTTAGTGATGAAAATGTCGGATAGTGGGTGGGAACCTGATATCATGACTTATAATATACGAATTCATGGTTTCTGCACAGCCCGAAAAGTTAATCGGGCTGTACAGATACTAGAGGAACTTATTTCAGCTGGAGTAGTTCCGAATACTGTAACATACAATACCATGATTAATGCTGTCTGTAATGTCCTCCTGGACCATGCTATGATTTTAACTGCGAAATTGCTTAAGATGGCGTTTGTTCCAAACACTGTCACAGCAAACGTATTACTGTCTCAATTTTGTAAGCAAGGGATGCCTGAGAAAGCCATATTTTGGGGTCAGAAGTTGAGTGAGATTCGTGTTGATTTCGATGAAACGACACATAAAATAATGAACAGGGCCTACCATATTATACAAGAAGGTGGCGAGCATATAAATGCATCATATGAGAAAAGCGTCTTCATGGATTTTCTCATGTATATTACTTATGATTACTTCTGTAGAACTAAACCCTCACAAGAGAAAGATGAGAGCTTAGCTTTTAAAACTAGTTTCAGTCAGTTCAATAGGTTGATTGAGGTATAA

Coding sequence (CDS)

ATGTTTGTCTATGTGCGTTGCCTACAGAACTCTTTTAAGGTACACTGGTCTTCTTCTCTGAGTCCATTTCAAACCCTAACTCCCAAGTTCTTAAACAAGTACAGTTCTTCCTCTTCTTCTGATTCGAGCACTTGTGCTTTTGATTATATTGCTCAATTTTTGCCTTCCAACGATGGTACTTTGAAATTGGTTTCTGTGAGTTCCGTCACTACGAATGACCGACGTAGAATCACTGTTGGGTTATCCAAAGCGATTAAGTTGTACCAGGGATACGCATTGAAGGAATTATCGAGAAATTTCTGCCCCTTTTTCTTGGTTAAGATTATGAAATTGTTTGAATGTCGGGAAACTGCGTTTGCGTTCTTCAAGCTAGCGTTTAATGACGATTGTGAAGAGACTGTAAGGTCTTGTTGTGTAGTGGCACATCTCTTAGCTGCAGAACGAATTTTTTTGCTCGCGCAAGATATTGTTTCGTGGATTTTTGCAAGAATTGGTCCACGTAGGAGCAAGGATTTGGCGGCATTTATGTGGGAAGGTCACTGTGAGTATGAATCTGACCTTTCAGTTTTGAACACTCTAATGCGGGCGTTTATGAAGTCGGAAATGCATTATGAGGCGTTAGAAATATTGAGTAAGATGCGGGAGGTGGGAGTGATGCCAAATGCATCCGCCATTTCCATTCTTTTTAGATTGCTGCTTAGAGCTGGTGATTATGGTGCTATATGGAAGTTGTTTCGGGACGTGGTTCGGAAGGGACCTCGCCCTAATAACTATATGTTTAACGTAATGATTCTTGAGTTTTGTAGAAAAGGTTGGAGTGTGATTGGAGAAGGTCTATTGCATGTAATGAGAAAATTTAGATGTGAACCAGATGTTTATTCGTATAATATTGTGATAAATGCAACCTGCTTAAGAGGGCAGTCATCAGATGCACTTCATTGGGTGAATATGATGATTGAAAACGGCTGTAAGCCCAGTATTGCTACATTCAGTATCGTCATTGATGCCTTCTGCAAGGAGGGAAACGTGGAGTTAGCTAGGAAAATCTTTGATGAAATTGAAGACATGGGTCTTTCTCATAATACTATAGTCTATAATAGCATGATAAGTGGGTATGTCAAGGCAAGAGACATTGGTCAAGCAAACTTGCTCTTTGAAGAAATGAGGACCAAGGATATAGTTCCTGATGGCATTACCTTTAATATATTGGTTGCTGGTCATTACAGATATGGAAGGGAGGAGGACGGGGATCGATTATTAAGGGATTTATCTGTGTCTGGGTTGCTTCATGATTCTTCCCTATGCGATGTAACCGTTGCAGGATTGTGCTGGGCAGGTAGATATGATGAGGCCATGAAGTTTCTAGAGGATTTACTTGAGAAAGGAATTCCTCCAAGTGTAGTAGCTTTTAATTCCATTATTGCAGCATACGGCAGTGCAGGTTTAGAAGAGAGAGCATTTTATGCTTATGGTACAATGACGAAATTTGGTTTAAGCCCTTCATCTTCCACATGTAGTTCCTTGCTTATCAGCTTAGTTAGGAAGGGGAGCCTTGATGATGCAAGGATAATTTTGTACGACATGATAGAAAAGGGATACCCTGTCAAGAACATGGCTTTTACAGGTCTTTTCGACGGGTACTTCAGAGTAGGAGATGTTAATACAGCTCAAAGTCTGTGGAATGAGATGAAGGGTAAGGGGGTGTTTCCCGACGCTGTTGCATTTGCAGCTTTCATTAACGGGCTCTGTATGTCGGGTTTGATGGAGGACGCTTATGATGTGTTCTCTAATATGTTGAGAAAAGGGTTTGTACCAAATAATTTTGTTTACAATTCCTTGATTGGTGGATTCTGTAGAGTGGGAAAACTAAATGAAGCCCTGAAATTGGAGAGAGAAATGAAGAAAAGAGGCCTTCTTCCCGATATTTTTACGACGAATATGATCATTGGTGGGTTATGCAAACAAGGTAGGATGAAGTTAGCAATTGAGACGTTCATGGACATGTATAGGATCGGTTTATCTCCTGATATTGTTACTTACAACACATTGATTGATGGTTACTGTAAAGCATTTGATATGGGTGGTGCAGATGATTTAGTGATGAAAATGTCGGATAGTGGGTGGGAACCTGATATCATGACTTATAATATACGAATTCATGGTTTCTGCACAGCCCGAAAAGTTAATCGGGCTGTACAGATACTAGAGGAACTTATTTCAGCTGGAGTAGTTCCGAATACTGTAACATACAATACCATGATTAATGCTGTCTGTAATGTCCTCCTGGACCATGCTATGATTTTAACTGCGAAATTGCTTAAGATGGCGTTTGTTCCAAACACTGTCACAGCAAACGTATTACTGTCTCAATTTTGTAAGCAAGGGATGCCTGAGAAAGCCATATTTTGGGGTCAGAAGTTGAGTGAGATTCGTGTTGATTTCGATGAAACGACACATAAAATAATGAACAGGGCCTACCATATTATACAAGAAGGTGGCGAGCATATAAATGCATCATATGAGAAAAGCGTCTTCATGGATTTTCTCATGTATATTACTTATGATTACTTCTGTAGAACTAAACCCTCACAAGAGAAAGATGAGAGCTTAGCTTTTAAAACTAGTTTCAGTCAGTTCAATAGGTTGATTGAGGTATAA

Protein sequence

MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGTLKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFAFFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGHCEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGAIWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRCEPDVYSYNIVINATCLRGQSSDALHWVNMMIENGCKPSIATFSIVIDAFCKEGNVELARKIFDEIEDMGLSHNTIVYNSMISGYVKARDIGQANLLFEEMRTKDIVPDGITFNILVAGHYRYGREEDGDRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKFLEDLLEKGIPPSVVAFNSIIAAYGSAGLEERAFYAYGTMTKFGLSPSSSTCSSLLISLVRKGSLDDARIILYDMIEKGYPVKNMAFTGLFDGYFRVGDVNTAQSLWNEMKGKGVFPDAVAFAAFINGLCMSGLMEDAYDVFSNMLRKGFVPNNFVYNSLIGGFCRVGKLNEALKLEREMKKRGLLPDIFTTNMIIGGLCKQGRMKLAIETFMDMYRIGLSPDIVTYNTLIDGYCKAFDMGGADDLVMKMSDSGWEPDIMTYNIRIHGFCTARKVNRAVQILEELISAGVVPNTVTYNTMINAVCNVLLDHAMILTAKLLKMAFVPNTVTANVLLSQFCKQGMPEKAIFWGQKLSEIRVDFDETTHKIMNRAYHIIQEGGEHINASYEKSVFMDFLMYITYDYFCRTKPSQEKDESLAFKTSFSQFNRLIEV
Homology
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BLAST of Carg14893 vs. NCBI nr
Match: XP_022924529.1 (pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita moschata])

HSP 1 Score: 577.8 bits (1488), Expect = 6.4e-161
Identity = 287/288 (99.65%), Postives = 288/288 (100.00%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT
Sbjct: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
           LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA
Sbjct: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMW+GH
Sbjct: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWDGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
           CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA
Sbjct: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC
Sbjct: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 288

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BLAST of Carg14893 vs. NCBI nr
Match: XP_023527510.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.9 bits (1483), Expect = 2.4e-160
Identity = 286/288 (99.31%), Postives = 287/288 (99.65%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT
Sbjct: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
           LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA
Sbjct: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH
Sbjct: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
           CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA
Sbjct: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           +WKLF DVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC
Sbjct: 241 VWKLFGDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 288

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BLAST of Carg14893 vs. NCBI nr
Match: XP_022980209.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita maxima] >XP_022980210.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita maxima])

HSP 1 Score: 565.5 bits (1456), Expect = 3.3e-157
Identity = 280/288 (97.22%), Postives = 284/288 (98.61%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT
Sbjct: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
           LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA
Sbjct: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAFNDDCE+TVRSCCVVAHLLAAER FLLAQDIVSWIFARIGPRRSK+LAAFMWEGH
Sbjct: 121 FFKLAFNDDCEDTVRSCCVVAHLLAAERFFLLAQDIVSWIFARIGPRRSKNLAAFMWEGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
           C+YESDLSVLNTLMR FMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA
Sbjct: 181 CDYESDLSVLNTLMRGFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           +WKLF DVVRKGP PNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC
Sbjct: 241 VWKLFGDVVRKGPCPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 288

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BLAST of Carg14893 vs. NCBI nr
Match: KGN56687.1 (hypothetical protein Csa_3G128950 [Cucumis sativus])

HSP 1 Score: 473.4 bits (1217), Expect = 1.7e-129
Identity = 238/288 (82.64%), Postives = 258/288 (89.58%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           MFV VR LQNSFKVHWSSSLS  QTL PK  N+Y SSSSSDSST +FDYIAQFLPSNDGT
Sbjct: 1   MFVNVRRLQNSFKVHWSSSLSSSQTLIPKLFNEYCSSSSSDSSTRSFDYIAQFLPSNDGT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
           LKL+SV+SVTTNDRRR+TVGLSKAIKLYQGY LK LSRNFCPF LVKIMKLFECRETA+A
Sbjct: 61  LKLISVNSVTTNDRRRVTVGLSKAIKLYQGYVLKGLSRNFCPFLLVKIMKLFECRETAYA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAF DD EETVRSCCV+AHLLAAE++  LAQDIVSW+ ARIGP RSK+LAAFMWEGH
Sbjct: 121 FFKLAFKDDSEETVRSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
             YESD SVL+TLMRAF+KSEMH+EALEILSKMREVGV PN SAISILFRLL+RAGD GA
Sbjct: 181 RVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           +WKLF DVVRKGP PNN+ FN++ILEFCRKGW+ IGE LLHVM KFRC
Sbjct: 241 VWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRC 288

[Close]
BLAST of Carg14893 vs. NCBI nr
Match: XP_011650837.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Cucumis sativus])

HSP 1 Score: 473.4 bits (1217), Expect = 1.7e-129
Identity = 238/288 (82.64%), Postives = 258/288 (89.58%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           MFV VR LQNSFKVHWSSSLS  QTL PK  N+Y SSSSSDSST +FDYIAQFLPSNDGT
Sbjct: 1   MFVNVRRLQNSFKVHWSSSLSSSQTLIPKLFNEYCSSSSSDSSTRSFDYIAQFLPSNDGT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
           LKL+SV+SVTTNDRRR+TVGLSKAIKLYQGY LK LSRNFCPF LVKIMKLFECRETA+A
Sbjct: 61  LKLISVNSVTTNDRRRVTVGLSKAIKLYQGYVLKGLSRNFCPFLLVKIMKLFECRETAYA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAF DD EETVRSCCV+AHLLAAE++  LAQDIVSW+ ARIGP RSK+LAAFMWEGH
Sbjct: 121 FFKLAFKDDSEETVRSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
             YESD SVL+TLMRAF+KSEMH+EALEILSKMREVGV PN SAISILFRLL+RAGD GA
Sbjct: 181 RVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           +WKLF DVVRKGP PNN+ FN++ILEFCRKGW+ IGE LLHVM KFRC
Sbjct: 241 VWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRC 288

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BLAST of Carg14893 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 46.2 bits (108), Expect = 1.2e-04
Identity = 31/122 (25.41%), Postives = 61/122 (50.00%), Query Frame = 0 

Query: 166 PRRSKDLAAFMW-EGHCEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASA 225
           P RS +L   M  EG+ +   ++   N L++A+ K +   EA E++ KM E GV P+   
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225

Query: 226 ISILFRLLLRAGD--YGAIWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHV 285
            + +    ++ G+        + + V+++  +PN     +++  +CR+G   + +GL  V
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREG--RVRDGLRFV 285

[Close]
BLAST of Carg14893 vs. TrEMBL
Match: tr|A0A0A0L7U2|A0A0A0L7U2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128950 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 1.1e-129
Identity = 238/288 (82.64%), Postives = 258/288 (89.58%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           MFV VR LQNSFKVHWSSSLS  QTL PK  N+Y SSSSSDSST +FDYIAQFLPSNDGT
Sbjct: 1   MFVNVRRLQNSFKVHWSSSLSSSQTLIPKLFNEYCSSSSSDSSTRSFDYIAQFLPSNDGT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
           LKL+SV+SVTTNDRRR+TVGLSKAIKLYQGY LK LSRNFCPF LVKIMKLFECRETA+A
Sbjct: 61  LKLISVNSVTTNDRRRVTVGLSKAIKLYQGYVLKGLSRNFCPFLLVKIMKLFECRETAYA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAF DD EETVRSCCV+AHLLAAE++  LAQDIVSW+ ARIGP RSK+LAAFMWEGH
Sbjct: 121 FFKLAFKDDSEETVRSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
             YESD SVL+TLMRAF+KSEMH+EALEILSKMREVGV PN SAISILFRLL+RAGD GA
Sbjct: 181 RVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           +WKLF DVVRKGP PNN+ FN++ILEFCRKGW+ IGE LLHVM KFRC
Sbjct: 241 VWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRC 288

[Close]
BLAST of Carg14893 vs. TrEMBL
Match: tr|A0A1S4DSR0|A0A1S4DSR0_CUCME (pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103483442 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 5.2e-127
Identity = 235/288 (81.60%), Postives = 256/288 (88.89%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           MFV VR LQNSFKVHWSSSLS  QTL PKF N+Y    SSDSST +FDYIAQFLPSNDGT
Sbjct: 1   MFVNVRRLQNSFKVHWSSSLSSSQTLIPKFFNEY--YYSSDSSTRSFDYIAQFLPSNDGT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
           LKL+SV+SVTTNDRRR++VGLSKA+KL QGY LK LSRNFCPF LVKIMKLFECRETAFA
Sbjct: 61  LKLISVNSVTTNDRRRVSVGLSKAVKLPQGYVLKGLSRNFCPFLLVKIMKLFECRETAFA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAF DD EETV+SCCV+AHLLAAE++  LAQDIVSW+ ARIGP RSK+LAAFMWEGH
Sbjct: 121 FFKLAFKDDSEETVKSCCVLAHLLAAEQLRFLAQDIVSWVVARIGPGRSKNLAAFMWEGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
             YESD SVLNTLMRAFMKSEMH+EALEILSKMREVGV PN SAISILFRLL+RAGD GA
Sbjct: 181 RMYESDFSVLNTLMRAFMKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           +WKLF DVVRKGP PNN++FN++ILEFCRKGW+ IGE LLHVM KFRC
Sbjct: 241 VWKLFGDVVRKGPCPNNFIFNLLILEFCRKGWTRIGEALLHVMGKFRC 286

[Close]
BLAST of Carg14893 vs. TrEMBL
Match: tr|A0A251R224|A0A251R224_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G180300 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.2e-84
Identity = 160/256 (62.50%), Postives = 200/256 (78.12%), Query Frame = 0 

Query: 34  YSSSSSSDSSTCAFDYIAQFLP-SNDGTLKLVSVSSVTTNDRRRITVGLSKAIKLYQGYA 93
           +SS+ +  +S+ +FDY  QFLP +ND + K  S+SS+ +N+RR++TVGLS+ IK  QGYA
Sbjct: 114 FSSTRTLITSSRSFDYFTQFLPFANDPSSK--SLSSINSNERRKVTVGLSRLIKKQQGYA 173

Query: 94  LKELSRNFCPFFLVKIMKLFECRETAFAFFKLAFNDDCEETVRSCCVVAHLLAAERIFLL 153
           LKE SR FCP  L ++MKL   RETAF FFKLA  DD E+ VRSCC+VAHLLA E +  L
Sbjct: 174 LKEFSRRFCPLLLAQVMKLLGSRETAFGFFKLALRDDSEQIVRSCCIVAHLLAGENLRFL 233

Query: 154 AQDIVSWIFARIGPRRSKDLAAFMWEGHCEYESDLSVLNTLMRAFMKSEMHYEALEILSK 213
           AQD+VS + A+I P RS+DL AFMW  HCEYESD SVL+TLMR F+K+EM  EALEI+S+
Sbjct: 234 AQDVVSCVIAKIEPSRSRDLVAFMWASHCEYESDFSVLDTLMRGFLKAEMGLEALEIVSR 293

Query: 214 MREVGVMPNASAISILFRLLLRAGDYGAIWKLFRDVVRKGPRPNNYMFNVMILEFCRKGW 273
           MREVG+ P+ SAI+ LFRLL+R GDYG++WK+ RD++RKGPRP NY FNVMIL FCRKG 
Sbjct: 294 MREVGLRPSLSAITNLFRLLIRIGDYGSVWKVLRDMIRKGPRPCNYTFNVMILGFCRKGL 353

Query: 274 SVIGEGLLHVMRKFRC 289
             +GE LLHVM KF+C
Sbjct: 354 LRVGESLLHVMWKFQC 367

[Close]
BLAST of Carg14893 vs. TrEMBL
Match: tr|W9R590|W9R590_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008023 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.2e-80
Identity = 161/288 (55.90%), Postives = 202/288 (70.14%), Query Frame = 0 

Query: 1   MFVYVRCLQNSFKVHWSSSLSPFQTLTPKFLNKYSSSSSSDSSTCAFDYIAQFLPSNDGT 60
           M   VR + ++F+VH       F TL          +SS    +  F ++ QFLP +  T
Sbjct: 1   MSASVRRVHSTFQVH-------FHTL----------NSSQILRSKTFHFLDQFLPLSSPT 60

Query: 61  LKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKLFECRETAFA 120
               S+SSV  N+RR+I +GLSK IK  +GY LK  SR FCP FLVKIMKL E RETAFA
Sbjct: 61  SS--SLSSVNPNERRKIALGLSKIIKSNKGYVLKGFSREFCPIFLVKIMKLLETRETAFA 120

Query: 121 FFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKDLAAFMWEGH 180
           FFKLAF DD +  VRSCCV AHLLAAE +  LAQD+VS + A+IG  RS+++   MW GH
Sbjct: 121 FFKLAFRDDSDAVVRSCCVAAHLLAAENLRFLAQDVVSCVIAKIGSSRSREMVELMWAGH 180

Query: 181 CEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRLLLRAGDYGA 240
           C+YESD SVL+TLMR F+ +EM YEALE+ ++MRE+GV P+ SA++ LF+LLLR GDYG+
Sbjct: 181 CKYESDFSVLDTLMRGFLNAEMGYEALEVFARMREMGVRPSLSAVNCLFKLLLRIGDYGS 240

Query: 241 IWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           +WKLFRD+VR GPRP NY F ++IL FC+KG   IGE LLHVM+KF C
Sbjct: 241 VWKLFRDMVRNGPRPCNYTFCMLILGFCQKGLMRIGESLLHVMQKFHC 269

[Close]
BLAST of Carg14893 vs. TrEMBL
Match: tr|A0A2I4HFE0|A0A2I4HFE0_9ROSI (pentatricopeptide repeat-containing protein At1g12620-like OS=Juglans regia OX=51240 GN=LOC109017009 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-79
Identity = 171/297 (57.58%), Postives = 207/297 (69.70%), Query Frame = 0 

Query: 1   MFVYVRC-LQNSFKVHWSS-SLSPFQ-TLTPKFLN---KYSSSSSSDSSTC---AFDYIA 60
           M   VRC ++N+ KVH SS +L+ F  TL PK       +S+S +S SST    +FD++ 
Sbjct: 1   MSANVRCVVRNTLKVHSSSRTLALFNLTLLPKTQTHKPSHSASFNSSSSTYSYQSFDFLE 60

Query: 61  QFLPSNDGTLKLVSVSSVTTNDRRRITVGLSKAIKLYQGYALKELSRNFCPFFLVKIMKL 120
           QFLP  D         S+ +N+RRRI VGLSK IK  QG+ L+  S+NFCP FLVKIMKL
Sbjct: 61  QFLPRTDSNSS--GFGSINSNERRRIAVGLSKMIKERQGFVLRGFSQNFCPCFLVKIMKL 120

Query: 121 FECRETAFAFFKLAFNDDCEETVRSCCVVAHLLAAERIFLLAQDIVSWIFARIGPRRSKD 180
           F  RETAFAFFK AF D  E  VR CCV AH+LAAE +  LAQD+VSWI  RIG  RS++
Sbjct: 121 FGNRETAFAFFKCAFRDCSEGIVRLCCVAAHILAAENLRFLAQDMVSWIIKRIGAGRSEE 180

Query: 181 LAAFMWEGHCEYESDLSVLNTLMRAFMKSEMHYEALEILSKMREVGVMPNASAISILFRL 240
           L  FMW GH EYESD SVL+TLMR F+  EM  EAL +L +MR+ G+ P+ SA+S LF L
Sbjct: 181 LVQFMWNGHHEYESDYSVLDTLMRCFVNVEMDKEALGVLDRMRKGGLTPSLSALSTLFTL 240

Query: 241 LLRAGDYGAIWKLFRDVVRKGPRPNNYMFNVMILEFCRKGWSVIGEGLLHVMRKFRC 289
           LLR GDYG++WK+FRD+V +GPRP+ Y FNVMIL FCRKG    GE LLHVM KFRC
Sbjct: 241 LLRVGDYGSVWKMFRDMVCRGPRPSTYTFNVMILGFCRKGMVRTGESLLHVMGKFRC 295

The following BLAST results are available for this feature:
BLAST of Carg14893 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924529.16.4e-16199.65pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita moschata][more]
XP_023527510.12.4e-16099.31pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... [more]
XP_022980209.13.3e-15797.22pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita maxima] >X... [more]
KGN56687.11.7e-12982.64hypothetical protein Csa_3G128950 [Cucumis sativus][more]
XP_011650837.11.7e-12982.64PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Cucumis s... [more]
BLAST of Carg14893 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25630.21.2e-0425.41Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg14893 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg14893 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7U2|A0A0A0L7U2_CUCSA1.1e-12982.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128950 PE=4 SV=1[more]
tr|A0A1S4DSR0|A0A1S4DSR0_CUCME5.2e-12781.60pentatricopeptide repeat-containing protein At1g63130, mitochondrial-like OS=Cuc... [more]
tr|A0A251R224|A0A251R224_PRUPE3.2e-8462.50Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G180300 PE=4 SV=1[more]
tr|W9R590|W9R590_9ROSA6.2e-8055.90Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008023 PE=4 SV=1[more]
tr|A0A2I4HFE0|A0A2I4HFE0_9ROSI3.1e-7957.58pentatricopeptide repeat-containing protein At1g12620-like OS=Juglans regia OX=5... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14893-RACarg14893-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 127..276
e-value: 1.1E-16
score: 62.6
coord: 586..690
e-value: 7.1E-33
score: 115.5
coord: 446..585
e-value: 4.7E-21
score: 76.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 692..845
e-value: 8.4E-24
score: 86.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 277..441
e-value: 2.3E-39
score: 137.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 455..509
e-value: 8.3E-5
score: 22.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 190..218
e-value: 9.1E-4
score: 19.2
coord: 540..568
e-value: 6.2E-4
score: 19.7
coord: 782..802
e-value: 0.12
score: 12.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 363..396
e-value: 7.9E-9
score: 33.2
coord: 293..326
e-value: 4.9E-7
score: 27.5
coord: 678..712
e-value: 9.3E-9
score: 32.9
coord: 609..642
e-value: 6.1E-8
score: 30.4
coord: 644..676
e-value: 4.9E-5
score: 21.2
coord: 714..747
e-value: 9.6E-7
score: 26.6
coord: 329..361
e-value: 2.1E-7
score: 28.7
coord: 574..606
e-value: 1.4E-7
score: 29.2
coord: 539..572
e-value: 6.6E-5
score: 20.8
coord: 190..222
e-value: 2.9E-4
score: 18.8
coord: 468..501
e-value: 4.1E-4
score: 18.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 290..339
e-value: 1.7E-14
score: 53.6
coord: 570..619
e-value: 1.6E-13
score: 50.5
coord: 710..759
e-value: 2.2E-14
score: 53.3
coord: 640..689
e-value: 6.9E-17
score: 61.3
coord: 361..407
e-value: 6.0E-12
score: 45.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 501..535
score: 9.197
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 10.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 8.462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 746..779
score: 6.621
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 7.969
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 641..675
score: 11.213
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 780..814
score: 7.256
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 711..745
score: 11.477
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 676..710
score: 12.036
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..500
score: 9.602
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 606..640
score: 13.57
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 12.057
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 536..570
score: 9.788
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..465
score: 10.852
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 8.517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 11.268
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 10.994
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 571..605
score: 12.156
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 713..795
coord: 33..721
NoneNo IPR availablePANTHERPTHR24015:SF892SUBFAMILY NOT NAMEDcoord: 713..795
coord: 33..721

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg14893Cla021380Watermelon (97103) v1carwmB0617
Carg14893Csa3G128950Cucumber (Chinese Long) v2carcuB0644
Carg14893MELO3C006272Melon (DHL92) v3.5.1carmeB0622
Carg14893ClCG05G002930Watermelon (Charleston Gray)carwcgB0602
Carg14893CSPI03G10360Wild cucumber (PI 183967)carcpiB0651
Carg14893Cucsa.256870Cucumber (Gy14) v1carcgyB0693
Carg14893CmaCh14G019300Cucurbita maxima (Rimu)carcmaB0874
Carg14893CmaCh00G004680Cucurbita maxima (Rimu)carcmaB0873
Carg14893CmaCh06G011800Cucurbita maxima (Rimu)carcmaB0877
Carg14893CmoCh14G019850Cucurbita moschata (Rifu)carcmoB0850
Carg14893Lsi05G018870Bottle gourd (USVL1VR-Ls)carlsiB565
Carg14893Cp4.1LG03g17630Cucurbita pepo (Zucchini)carcpeB0884
Carg14893Cp4.1LG08g02520Cucurbita pepo (Zucchini)carcpeB0885
Carg14893CsGy3G010460Cucumber (Gy14) v2carcgybB0617
Carg14893MELO3C006272.2Melon (DHL92) v3.6.1carmedB0629
Carg14893Cla97C05G083520Watermelon (97103) v2carwmbB0647
Carg14893Bhi01G000122Wax gourdcarwgoB0737
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg14893Carg06326Silver-seed gourdcarcarB549
The following block(s) are covering this gene:
GeneOrganismBlock
Carg14893Silver-seed gourdcarcarB261
Carg14893Cucurbita maxima (Rimu)carcmaB0876
Carg14893Cucurbita moschata (Rifu)carcmoB0851
Carg14893Cucurbita moschata (Rifu)carcmoB0852
Carg14893Cucurbita pepo (Zucchini)carcpeB0881
Carg14893Cucumber (Chinese Long) v3carcucB0652
Carg14893Watermelon (97103) v2carwmbB0646