Carg09959 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCAAAATCTGGATCCTCCAATCCCAAACTGCAGAGCATCGGCGGTTCCCGCAAGTGCCTCTGTTCTCCCACCACCCATCCTGGCTCTTTCCGCTGCAGTATTCATCGGAACCGCCGCAAGGTTTCCGCTAGGTCATCGTCCTCATCCATTGCTGCCATTACCACTGCTCAATTGAAGCTTACGATGTTGGCGAAGGCGAATGCGTTGAGGTCGTTTCTTCAGCAGATCATCAATCCCTCCAGTAAAGATCTTCAGCGGCGGAGGAATTTTCGTCCCAAACCTTCCAGGTTTTGCTTGATGAACAATCATGGAACTGGATTGGCTGTTTCTTAA ATGGCCTCAAAATCTGGATCCTCCAATCCCAAACTGCAGAGCATCGGCGGTTCCCGCAAGTGCCTCTGTTCTCCCACCACCCATCCTGGCTCTTTCCGCTGCAGTATTCATCGGAACCGCCGCAAGGTTTCCGCTAGGTCATCGTCCTCATCCATTGCTGCCATTACCACTGCTCAATTGAAGCTTACGATGTTGGCGAAGGCGAATGCGTTGAGGTCGTTTCTTCAGCAGATCATCAATCCCTCCAGTAAAGATCTTCAGCGGCGGAGGAATTTTCGTCCCAAACCTTCCAGGTTTTGCTTGATGAACAATCATGGAACTGGATTGGCTGTTTCTTAA ATGGCCTCAAAATCTGGATCCTCCAATCCCAAACTGCAGAGCATCGGCGGTTCCCGCAAGTGCCTCTGTTCTCCCACCACCCATCCTGGCTCTTTCCGCTGCAGTATTCATCGGAACCGCCGCAAGGTTTCCGCTAGGTCATCGTCCTCATCCATTGCTGCCATTACCACTGCTCAATTGAAGCTTACGATGTTGGCGAAGGCGAATGCGTTGAGGTCGTTTCTTCAGCAGATCATCAATCCCTCCAGTAAAGATCTTCAGCGGCGGAGGAATTTTCGTCCCAAACCTTCCAGGTTTTGCTTGATGAACAATCATGGAACTGGATTGGCTGTTTCTTAA MASKSGSSNPKLQSIGGSRKCLCSPTTHPGSFRCSIHRNRRKVSARSSSSSIAAITTAQLKLTMLAKANALRSFLQQIINPSSKDLQRRRNFRPKPSRFCLMNNHGTGLAVS
BLAST of Carg09959 vs. NCBI nr
Match: XP_022921799.1 (uncharacterized protein LOC111429944 [Cucurbita moschata]) HSP 1 Score: 216.1 bits (549), Expect = 6.1e-53 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg09959 vs. NCBI nr
Match: XP_023515429.1 (uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.4 bits (542), Expect = 4.0e-52 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Carg09959 vs. NCBI nr
Match: XP_023003805.1 (uncharacterized protein LOC111497277 [Cucurbita maxima]) HSP 1 Score: 177.2 bits (448), Expect = 3.2e-41 Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of Carg09959 vs. NCBI nr
Match: XP_022927032.1 (uncharacterized protein LOC111433980 [Cucurbita moschata]) HSP 1 Score: 176.4 bits (446), Expect = 5.4e-41 Identity = 90/112 (80.36%), Postives = 98/112 (87.50%), Query Frame = 0
BLAST of Carg09959 vs. NCBI nr
Match: XP_023530962.1 (uncharacterized protein LOC111793349 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 90/112 (80.36%), Postives = 97/112 (86.61%), Query Frame = 0
BLAST of Carg09959 vs. TAIR10
Match: AT5G11090.1 (serine-rich protein-related) HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Carg09959 vs. TAIR10
Match: AT5G25280.1 (serine-rich protein-related) HSP 1 Score: 61.2 bits (147), Expect = 4.6e-10 Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 0
BLAST of Carg09959 vs. TAIR10
Match: AT5G20370.1 (serine-rich protein-related) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08 Identity = 40/102 (39.22%), Postives = 47/102 (46.08%), Query Frame = 0
BLAST of Carg09959 vs. TAIR10
Match: AT1G67910.1 (unknown protein) HSP 1 Score: 43.1 bits (100), Expect = 1.3e-04 Identity = 21/38 (55.26%), Postives = 24/38 (63.16%), Query Frame = 0
BLAST of Carg09959 vs. TAIR10
Match: AT1G24577.1 (unknown protein) HSP 1 Score: 41.6 bits (96), Expect = 3.8e-04 Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 0
BLAST of Carg09959 vs. TrEMBL
Match: tr|A0A1S3B8Q0|A0A1S3B8Q0_CUCME (uncharacterized protein LOC103487396 OS=Cucumis melo OX=3656 GN=LOC103487396 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 8.8e-32 Identity = 78/112 (69.64%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of Carg09959 vs. TrEMBL
Match: tr|A0A0A0LYY6|A0A0A0LYY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264520 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.6e-31 Identity = 79/113 (69.91%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of Carg09959 vs. TrEMBL
Match: tr|B9SZN1|B9SZN1_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1372180 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.7e-25 Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 0
BLAST of Carg09959 vs. TrEMBL
Match: tr|I3NMS2|I3NMS2_HEVBR (Uncharacterized protein OS=Hevea brasiliensis OX=3981 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.3e-24 Identity = 69/114 (60.53%), Postives = 81/114 (71.05%), Query Frame = 0
BLAST of Carg09959 vs. TrEMBL
Match: tr|A0A2P5DX22|A0A2P5DX22_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_239540 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.4e-23 Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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