CSPI01G17140 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCACAAGTTTTCCCTAAAAATCAGTCCACAAATAATAATCACTCCCACATTTTCAAATTCAATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGAATTCCCCCTTTTTTTTAGTTGCTTAATCAGTCGTTTGTACGTGTAGTAGATCTGGATGTCTGTTTTTGTTCCTGATTTCGATCTTCTTCCTTCGCTGAATTTCCAGATGAGTTTGTAGATATAGTACTCTGTTTGTGTACAGATTATTTCGAGACGACATTGGATCTTGACGATTCTACAAGTCTTTCTTGAAATATAATTAGTGTTTTTTTTCTTTCTCTCTTTCATTTCTTTTGCATCTTTTCCTCTGTTTCTTCTTCTCTGATTCTTGCAACTGGCAAATGCAAGCGAAGTCGTAATAAACGGATGATGATTCATTACATCTTGAAATGTTTTCTTGATTTCTTTATCAAGAACTTCCACAAA ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGA ATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGA
BLAST of CSPI01G17140 vs. TrEMBL
Match: A0A0A0LYY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264520 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 7.5e-54 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of CSPI01G17140 vs. TrEMBL
Match: B9SZN1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1372180 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.3e-25 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of CSPI01G17140 vs. TrEMBL
Match: I3NMS2_HEVBR (Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.5e-22 Identity = 65/112 (58.04%), Postives = 76/112 (67.86%), Query Frame = 1
BLAST of CSPI01G17140 vs. TrEMBL
Match: F6HCI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00580 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-21 Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1
BLAST of CSPI01G17140 vs. TrEMBL
Match: A0A061GP27_THECC (Serine-rich protein-related OS=Theobroma cacao GN=TCM_038231 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 9.3e-20 Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 1
BLAST of CSPI01G17140 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-10 Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1
BLAST of CSPI01G17140 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related) HSP 1 Score: 60.5 bits (145), Expect = 7.8e-10 Identity = 39/110 (35.45%), Postives = 63/110 (57.27%), Query Frame = 1
BLAST of CSPI01G17140 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related) HSP 1 Score: 58.2 bits (139), Expect = 3.9e-09 Identity = 45/114 (39.47%), Postives = 52/114 (45.61%), Query Frame = 1
BLAST of CSPI01G17140 vs. NCBI nr
Match: gi|778660170|ref|XP_011655735.1| (PREDICTED: uncharacterized protein LOC101204798 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of CSPI01G17140 vs. NCBI nr
Match: gi|659086407|ref|XP_008443918.1| (PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]) HSP 1 Score: 181.8 bits (460), Expect = 6.5e-43 Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 1
BLAST of CSPI01G17140 vs. NCBI nr
Match: gi|1000942539|ref|XP_015582253.1| (PREDICTED: uncharacterized protein LOC8286598 [Ricinus communis]) HSP 1 Score: 122.5 bits (306), Expect = 4.7e-25 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of CSPI01G17140 vs. NCBI nr
Match: gi|313586597|gb|ADR71309.1| (hypothetical protein 31 [Hevea brasiliensis]) HSP 1 Score: 113.6 bits (283), Expect = 2.2e-22 Identity = 65/112 (58.04%), Postives = 76/112 (67.86%), Query Frame = 1
BLAST of CSPI01G17140 vs. NCBI nr
Match: gi|720089768|ref|XP_010244874.1| (PREDICTED: uncharacterized protein LOC104588580 [Nelumbo nucifera]) HSP 1 Score: 106.3 bits (264), Expect = 3.5e-20 Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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