Cucsa.350580 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCACAAATAATAATCACTCCCACATTTTCAAATTCAATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGA TCCACAAATAATAATCACTCCCACATTTTCAAATTCAATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGA TCCACAAATAATAATCACTCCCACATTTTCAAATTCAATGGCCTCAAAATCTGGATCCTCCACTCACAAATTCCCGACCAACGGCGCTTCTCGGAAGTGTCTCTGTTCTCCTACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCACCGGAACCGCCACAAGATCTCCTCCTCTAGGTCTTCATCTTCATCCCTTTCCCTCATTACCACTGCCGACTTGGAGCTTGCAAAGGCTAATGCCTTGAGATCATTTCTGCTCCAGATGATTAAGCCCTCCAGTAACGATCTTCAACGGCGGAGGAATTTTCATCCTCGACCTTCCAGGTTTTGTTTGATGAACGATCATGCAACTGGATTGGCTGTTTCTTGA PQIIITPTFSNSMASKSGSSTHKFPTNGASRKCLCSPTTHPGSFRCSFHRNRHKISSSRSSSSSLSLITTADLELAKANALRSFLLQMIKPSSNDLQRRRNFHPRPSRFCLMNDHATGLAVS*
BLAST of Cucsa.350580 vs. TrEMBL
Match: A0A0A0LYY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264520 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 8.9e-56 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Cucsa.350580 vs. TrEMBL
Match: B9SZN1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1372180 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.1e-27 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of Cucsa.350580 vs. TrEMBL
Match: I3NMS2_HEVBR (Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24 Identity = 65/112 (58.04%), Postives = 76/112 (67.86%), Query Frame = 1
BLAST of Cucsa.350580 vs. TrEMBL
Match: F6HCI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00580 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 9.9e-23 Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1
BLAST of Cucsa.350580 vs. TrEMBL
Match: A0A061GP27_THECC (Serine-rich protein-related OS=Theobroma cacao GN=TCM_038231 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-21 Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 1
BLAST of Cucsa.350580 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related) HSP 1 Score: 72.8 bits (177), Expect = 1.7e-13 Identity = 42/117 (35.90%), Postives = 67/117 (57.26%), Query Frame = 1
BLAST of Cucsa.350580 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-13 Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 1
BLAST of Cucsa.350580 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11 Identity = 45/114 (39.47%), Postives = 52/114 (45.61%), Query Frame = 1
BLAST of Cucsa.350580 vs. TAIR10
Match: AT3G13227.1 (AT3G13227.1 serine-rich protein-related) HSP 1 Score: 52.8 bits (125), Expect = 1.8e-07 Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 1
BLAST of Cucsa.350580 vs. TAIR10
Match: AT1G52342.1 (AT1G52342.1 unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 3.4e-06 Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 1
BLAST of Cucsa.350580 vs. NCBI nr
Match: gi|778660170|ref|XP_011655735.1| (PREDICTED: uncharacterized protein LOC101204798 [Cucumis sativus]) HSP 1 Score: 224.2 bits (570), Expect = 1.3e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Cucsa.350580 vs. NCBI nr
Match: gi|659086407|ref|XP_008443918.1| (PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]) HSP 1 Score: 187.6 bits (475), Expect = 1.3e-44 Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 1
BLAST of Cucsa.350580 vs. NCBI nr
Match: gi|1000942539|ref|XP_015582253.1| (PREDICTED: uncharacterized protein LOC8286598 [Ricinus communis]) HSP 1 Score: 128.6 bits (322), Expect = 7.3e-27 Identity = 66/110 (60.00%), Postives = 84/110 (76.36%), Query Frame = 1
BLAST of Cucsa.350580 vs. NCBI nr
Match: gi|313586597|gb|ADR71309.1| (hypothetical protein 31 [Hevea brasiliensis]) HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24 Identity = 65/112 (58.04%), Postives = 76/112 (67.86%), Query Frame = 1
BLAST of Cucsa.350580 vs. NCBI nr
Match: gi|720089768|ref|XP_010244874.1| (PREDICTED: uncharacterized protein LOC104588580 [Nelumbo nucifera]) HSP 1 Score: 112.8 bits (281), Expect = 4.1e-22 Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|