Cp4.1LG18g05390 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCAAAATCTGGATCCTCCAATCCCAAATTGCAGAGCATCGGCGGTTCTCGCAAGTGCCTCTGTTCTCCCACCACCCATCCTGGCTCTTTCCGCTGCAGTATTCATCGGAACCGCCGCAAGGTTTCCGCTAGGTCATCGTCCTCATCCATTGCTGCCATTACCACTGCTCAATTGAAGCTTACGATGTTGGCGAAGGCGAATGCGTTGAGATCGTTTCTTCTGCAGATCATCAATCCTTCCAGTAAAGATCTTCAGCGGCGGAGGAATTTTCGTCCCAAACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGGCTGTTTCTTAA ATGGCCTCAAAATCTGGATCCTCCAATCCCAAATTGCAGAGCATCGGCGGTTCTCGCAAGTGCCTCTGTTCTCCCACCACCCATCCTGGCTCTTTCCGCTGCAGTATTCATCGGAACCGCCGCAAGGTTTCCGCTAGGTCATCGTCCTCATCCATTGCTGCCATTACCACTGCTCAATTGAAGCTTACGATGTTGGCGAAGGCGAATGCGTTGAGATCGTTTCTTCTGCAGATCATCAATCCTTCCAGTAAAGATCTTCAGCGGCGGAGGAATTTTCGTCCCAAACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGGCTGTTTCTTAA ATGGCCTCAAAATCTGGATCCTCCAATCCCAAATTGCAGAGCATCGGCGGTTCTCGCAAGTGCCTCTGTTCTCCCACCACCCATCCTGGCTCTTTCCGCTGCAGTATTCATCGGAACCGCCGCAAGGTTTCCGCTAGGTCATCGTCCTCATCCATTGCTGCCATTACCACTGCTCAATTGAAGCTTACGATGTTGGCGAAGGCGAATGCGTTGAGATCGTTTCTTCTGCAGATCATCAATCCTTCCAGTAAAGATCTTCAGCGGCGGAGGAATTTTCGTCCCAAACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGGCTGTTTCTTAA MASKSGSSNPKLQSIGGSRKCLCSPTTHPGSFRCSIHRNRRKVSARSSSSSIAAITTAQLKLTMLAKANALRSFLLQIINPSSKDLQRRRNFRPKPSRFCLMNNHGTGLAVS
BLAST of Cp4.1LG18g05390 vs. TrEMBL
Match: A0A0A0LYY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264520 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.4e-36 Identity = 86/113 (76.11%), Postives = 95/113 (84.07%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. TrEMBL
Match: B9SZN1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1372180 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.0e-26 Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. TrEMBL
Match: I3NMS2_HEVBR (Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.5e-25 Identity = 70/114 (61.40%), Postives = 82/114 (71.93%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. TrEMBL
Match: F6HCI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00580 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 6.9e-23 Identity = 59/106 (55.66%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. TrEMBL
Match: A0A061GP27_THECC (Serine-rich protein-related OS=Theobroma cacao GN=TCM_038231 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.6e-22 Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related) HSP 1 Score: 67.0 bits (162), Expect = 8.4e-12 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related) HSP 1 Score: 61.2 bits (147), Expect = 4.6e-10 Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08 Identity = 40/102 (39.22%), Postives = 47/102 (46.08%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. NCBI nr
Match: gi|778660170|ref|XP_011655735.1| (PREDICTED: uncharacterized protein LOC101204798 [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 2.1e-36 Identity = 86/113 (76.11%), Postives = 95/113 (84.07%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. NCBI nr
Match: gi|659086407|ref|XP_008443918.1| (PREDICTED: uncharacterized protein LOC103487396 [Cucumis melo]) HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32 Identity = 79/112 (70.54%), Postives = 88/112 (78.57%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. NCBI nr
Match: gi|1000942539|ref|XP_015582253.1| (PREDICTED: uncharacterized protein LOC8286598 [Ricinus communis]) HSP 1 Score: 125.9 bits (315), Expect = 4.3e-26 Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. NCBI nr
Match: gi|313586597|gb|ADR71309.1| (hypothetical protein 31 [Hevea brasiliensis]) HSP 1 Score: 122.9 bits (307), Expect = 3.6e-25 Identity = 70/114 (61.40%), Postives = 82/114 (71.93%), Query Frame = 1
BLAST of Cp4.1LG18g05390 vs. NCBI nr
Match: gi|720089768|ref|XP_010244874.1| (PREDICTED: uncharacterized protein LOC104588580 [Nelumbo nucifera]) HSP 1 Score: 115.2 bits (287), Expect = 7.6e-23 Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |