Carg07475 (gene) Silver-seed gourd

Overview
NameCarg07475
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionIST1 homolog
LocationCucurbita_argyrosperma_scaffold_019 : 1033304 .. 1034767 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGGAAACTGGATGCTCTACTGGGAAGGAATAGATATTTGAAGCCTTCCAAGTTCAAGGCCCTTGCTAATATGGCCATTTCTAGGACTGCCATCCTCAAGAATCAGCACCAAGCTCGCTGCTCTCTTGCCCAGCCTGACGTTCTTCAGCTCTTGAACCTTGCTTTCCAACCACGCGCTCAGCTAGAGTAATTTGTTTCTCTATCTCTATCAGTTCAGCTTCTTTTCTGTCTTCTTATGCGTATAATTTGCATGCTAAGCTTGGATGCATGGGATCCCCTGGTGAAGTGAAGGAGGTAGTATCGAATCTGATCTTTGAGGCTTCAAGGTGCAGAGAGTTTCCAGAACTTCAGGAGATTTGTCGGATTTCAAAGTTGAAATTTGGGAGAGTTAATAGCTAAAGCTCACTGCTAGCAAATATTGTCCTCTTTAACCTTTCCCTTTCGACATGGGATCTCACAATCCACCCCCTTCAAAACCTAGCGTCCTTGCTGGCACACCGCTCAATGCCTAGCTCTGATACCATTTGTAAAAGCCTGTAGTAGCCTAAGCCCACCGCTAAGGTGAGGTTGAAATTAACTGCAAGAACAGAATTAGTTGCCTGCACATATCACTTACTAACCACAACTTCCATGTTACAGATGATCCAAAGTTTTCAACAAGACAGCCCAGCGCGGAAACTAAGCTGAAAGTGCTGAAGGAAATTGCTTTTGAGAACGGCATCACTCTGCATTTAGAAAAAGAACCTACAGTAATCAACAAGGTAAGGAATGTTTCTACTTTTGAAGTATATTTTTAGTAAAATTCATCGGTTAACTGCAGGAAAAGCTAAAGCAGAAGCTGGAAGCCAAGAAATCAGCAACCTTGGATAATCCTGAAGTCATAAACACCACGGATAATGTATATGAGGTTATTATAAGTGACGAATCAGTATCAGAATCAGTGAGAGCAAAGAAGTTTAAAGACGTAGCTAGTGCAGCTCAAGACGCCTTCCAAGCAACAAAAGCTGAAATCGAGTTTTCGAGGTCTAAATCACAGGATATCGATATAGATCATGAAGATGGCTCTTATTTTCACAAAAATGAAAAAGCCTCAAAGATGGATAGTTCTCACAAATCCAAGCTTAATGCAGAAGAAGCTAGCATACCTTACAGTAAGATTGACCATTCAGACGATTTTAGTTTTGAAAATACTCATCTTGTTGAACTTGAAAGCTGCAGTTCAGAATATAAATACATAGAAGAAAGGAATCAAGAAGAATCACCAGCTGAACCTGCCAAAGAAAATATGTCATCTGTTCCAAATTTGGATTCAGATATTAGCAATCTCAAGGAGAAATCATCAAATTCAAATTCAATCTTCCACAATGAACCAGGAAATGACAGGTTAATTAGTAAAGAAGAGTTTGCCAGTAAAAATGAAATTTCAGATGAGGATATCAGAGCTCATGCATTGAAGTAA

mRNA sequence

ATGGGAAGGAAACTGGATGCTCTACTGGGAAGGAATAGATATTTGAAGCCTTCCAAGTTCAAGGCCCTTGCTAATATGGCCATTTCTAGGACTGCCATCCTCAAGAATCAGCACCAAGCTCGCTGCTCTCTTGCCCAGCCTGACGTTCTTCAGCTCTTGAACCTTGCTTTCCAACCACGCGCTCAGCTAGAACAGCCCAGCGCGGAAACTAAGCTGAAAGTGCTGAAGGAAATTGCTTTTGAGAACGGCATCACTCTGCATTTAGAAAAAGAACCTACAGTAATCAACAAGGAAAAGCTAAAGCAGAAGCTGGAAGCCAAGAAATCAGCAACCTTGGATAATCCTGAAGTCATAAACACCACGGATAATGTATATGAGGTTATTATAAGTGACGAATCAGTATCAGAATCAGTGAGAGCAAAGAAGTTTAAAGACGTAGCTAGTGCAGCTCAAGACGCCTTCCAAGCAACAAAAGCTGAAATCGAGTTTTCGAGGTCTAAATCACAGGATATCGATATAGATCATGAAGATGGCTCTTATTTTCACAAAAATGAAAAAGCCTCAAAGATGGATAGTTCTCACAAATCCAAGCTTAATGCAGAAGAAGCTAGCATACCTTACAGTAAGATTGACCATTCAGACGATTTTAGTTTTGAAAATACTCATCTTGTTGAACTTGAAAGCTGCAGTTCAGAATATAAATACATAGAAGAAAGGAATCAAGAAGAATCACCAGCTGAACCTGCCAAAGAAAATATGTCATCTGTTCCAAATTTGGATTCAGATATTAGCAATCTCAAGGAGAAATCATCAAATTCAAATTCAATCTTCCACAATGAACCAGGAAATGACAGGTTAATTAGTAAAGAAGAGTTTGCCAGTAAAAATGAAATTTCAGATGAGGATATCAGAGCTCATGCATTGAAGTAA

Coding sequence (CDS)

ATGGGAAGGAAACTGGATGCTCTACTGGGAAGGAATAGATATTTGAAGCCTTCCAAGTTCAAGGCCCTTGCTAATATGGCCATTTCTAGGACTGCCATCCTCAAGAATCAGCACCAAGCTCGCTGCTCTCTTGCCCAGCCTGACGTTCTTCAGCTCTTGAACCTTGCTTTCCAACCACGCGCTCAGCTAGAACAGCCCAGCGCGGAAACTAAGCTGAAAGTGCTGAAGGAAATTGCTTTTGAGAACGGCATCACTCTGCATTTAGAAAAAGAACCTACAGTAATCAACAAGGAAAAGCTAAAGCAGAAGCTGGAAGCCAAGAAATCAGCAACCTTGGATAATCCTGAAGTCATAAACACCACGGATAATGTATATGAGGTTATTATAAGTGACGAATCAGTATCAGAATCAGTGAGAGCAAAGAAGTTTAAAGACGTAGCTAGTGCAGCTCAAGACGCCTTCCAAGCAACAAAAGCTGAAATCGAGTTTTCGAGGTCTAAATCACAGGATATCGATATAGATCATGAAGATGGCTCTTATTTTCACAAAAATGAAAAAGCCTCAAAGATGGATAGTTCTCACAAATCCAAGCTTAATGCAGAAGAAGCTAGCATACCTTACAGTAAGATTGACCATTCAGACGATTTTAGTTTTGAAAATACTCATCTTGTTGAACTTGAAAGCTGCAGTTCAGAATATAAATACATAGAAGAAAGGAATCAAGAAGAATCACCAGCTGAACCTGCCAAAGAAAATATGTCATCTGTTCCAAATTTGGATTCAGATATTAGCAATCTCAAGGAGAAATCATCAAATTCAAATTCAATCTTCCACAATGAACCAGGAAATGACAGGTTAATTAGTAAAGAAGAGTTTGCCAGTAAAAATGAAATTTCAGATGAGGATATCAGAGCTCATGCATTGAAGTAA

Protein sequence

MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPRAQLEQPSAETKLKVLKEIAFENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRAKKFKDVASAAQDAFQATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSSHKSKLNAEEASIPYSKIDHSDDFSFENTHLVELESCSSEYKYIEERNQEESPAEPAKENMSSVPNLDSDISNLKEKSSNSNSIFHNEPGNDRLISKEEFASKNEISDEDIRAHALK
Homology
[Close]
BLAST of Carg07475 vs. NCBI nr
Match: XP_008461584.1 (PREDICTED: uncharacterized protein LOC103500154 [Cucumis melo])

HSP 1 Score: 315.8 bits (808), Expect = 1.6e-82
Identity = 211/413 (51.09%), Postives = 253/413 (61.26%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRNRYLKPSKFK LANMAISRT+ILKNQH+ARCSLA+ DVLQLLNL +Q R
Sbjct: 1   MGRKLDALLGRNRYLKPSKFKTLANMAISRTSILKNQHRARCSLARADVLQLLNLGYQHR 60

Query: 61  AQL--------------------------------------------------------- 120
           AQL                                                         
Sbjct: 61  AQLRVEIVIKENNMLDALGMIEDYCCLLVEKVALFQMNKECPGEVKEAISSLIFAASRCG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                      +QP+AETKLKVLKEIA 
Sbjct: 121 EFPELQEIRRIFELKFGTEFASSAIDLRNNCGVSPKMIQKFSTKQPTAETKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 240
           ENGI L+LE+EP +I KEKL QKLE KK A L NPEV NTTD+++EVI S++  SE V+A
Sbjct: 181 ENGIPLNLEEEPPIIVKEKLNQKLEVKKEADLYNPEVTNTTDDLHEVITSEKLASELVKA 240

Query: 241 KKFKDVASAAQDAFQATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSSHKSKLNA 300
           KKFKDVASAA++AFQ+    I F +S+SQDID DHEDGS+  KN K+S+++SS++SKLN 
Sbjct: 241 KKFKDVASAAEEAFQSAAKAINFLKSESQDIDSDHEDGSHLQKNGKSSELNSSYESKLNT 300

Query: 301 EEASIPYSKIDHSDD-FSFENTHLVELESCSSEYK--YIEERNQEESPAEPAKENMSSVP 310
           +EASIP SKID+SDD FSFE    V LESCSS+Y+   +EE NQEE P EPA E+ SSV 
Sbjct: 301 KEASIPSSKIDYSDDRFSFEKICPVGLESCSSQYEDADMEETNQEELPKEPAIESTSSVL 360

[Close]
BLAST of Carg07475 vs. NCBI nr
Match: XP_011651369.1 (PREDICTED: uncharacterized protein LOC105434874 isoform X1 [Cucumis sativus] >KGN57745.1 hypothetical protein Csa_3G271380 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 2.7e-74
Identity = 202/420 (48.10%), Postives = 242/420 (57.62%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRNRYLK SKFK LANMAISRT+ILKN H+ARCSLA+ DVLQLLNL++Q R
Sbjct: 1   MGRKLDALLGRNRYLKASKFKTLANMAISRTSILKNHHRARCSLARADVLQLLNLSYQHR 60

Query: 61  AQL--------------------------------------------------------- 120
           AQL                                                         
Sbjct: 61  AQLRVEIVIKENNMLDALGMIEDYCCLLVEKVALLQMNKECPGEVKEAISSLIFAASRCG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                      +QPSAETKLKVLKEIA 
Sbjct: 121 EFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 240
           ENGI LHLE+E  +I K K  QKLE KK A L NPEV NTTD+++EVI S++  SE V++
Sbjct: 181 ENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVTNTTDDLHEVITSEKMASELVKS 240

Query: 241 KKFKDVASAAQDAFQ-------ATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSS 300
           KKFKDVASA ++ FQ       A KA I  S+SKSQDID DHEDGS+  KN K S ++SS
Sbjct: 241 KKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDIDSDHEDGSHLQKNGKGSDLNSS 300

Query: 301 HKSKLNAEEASIPYSKIDHSDD-FSFENTHLVELESCSSEYK--YIEERNQEESPAEPAK 310
           ++ KLN +E  I   KID+SDD FSFE    VELESCSS+Y+   +EE NQEE P EPAK
Sbjct: 301 YEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAK 360

[Close]
BLAST of Carg07475 vs. NCBI nr
Match: XP_022983568.1 (uncharacterized protein LOC111482134 [Cucurbita maxima])

HSP 1 Score: 279.3 bits (713), Expect = 1.6e-71
Identity = 205/421 (48.69%), Postives = 235/421 (55.82%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRNRYLKPSK K LANMAISRTAILKNQH+ARCSLA+ DVLQLLNL++Q R
Sbjct: 1   MGRKLDALLGRNRYLKPSKIKILANMAISRTAILKNQHRARCSLARADVLQLLNLSYQHR 60

Query: 61  AQL--------------------------------------------------------- 120
           AQL                                                         
Sbjct: 61  AQLRVEIVIKENNMMDALGMIEDYCSLLIEKVALLQMNKECPGEVKEAISSLIFASSRFG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                      +QP+AETKLKVLKEIA 
Sbjct: 121 EFPELQEIRRIFELKFGKEFAGSAIDLRNNCGVSPKMIQKFSTKQPNAETKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 240
           ENGITLHLE+EP ++   K+ QKLE KKSA LDNPEVINTTDN +EVI+S+E+ SESVRA
Sbjct: 181 ENGITLHLEEEPAIV--IKVNQKLETKKSADLDNPEVINTTDNPHEVIMSEETASESVRA 240

Query: 241 KKFKDVASAAQDAFQ-------ATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSS 300
           KKFKD ASAAQ+AFQ       A KA IE SRS+SQDI          H  E+ S ++SS
Sbjct: 241 KKFKDAASAAQEAFQSAAYAALAAKAAIELSRSESQDI----------HIEERNSDLESS 300

Query: 301 HKSKLNAEEASIPYSKIDHSDDFSFENTHLVELESCSSEYKYIE--ERNQEESPAEPAKE 310
           H+ K+N +                       ELESCSSEY+  +  E NQEE P EPAKE
Sbjct: 301 HEPKINPD-----------------------ELESCSSEYEDQDAAESNQEELPEEPAKE 360

[Close]
BLAST of Carg07475 vs. NCBI nr
Match: XP_022934804.1 (uncharacterized protein LOC111441867 [Cucurbita moschata])

HSP 1 Score: 270.8 bits (691), Expect = 5.8e-69
Identity = 199/421 (47.27%), Postives = 233/421 (55.34%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRNRYLKPSK K L NMAISRTAILKNQH+ARCSLA+ DVLQLLNL++Q R
Sbjct: 1   MGRKLDALLGRNRYLKPSKIKILVNMAISRTAILKNQHRARCSLARADVLQLLNLSYQHR 60

Query: 61  AQL--------------------------------------------------------- 120
           AQL                                                         
Sbjct: 61  AQLRVEIVIKENNMMDALGMIEDYCSLLIEKVALLQMNKECPGEVKEAISSLIFASSRFG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                      +QP+AETKLKVLKEIA 
Sbjct: 121 EFPELQEIRRIFELKFGKEFASSAVNLRNNCGVSPKMIQKFSTKQPNAETKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 240
           ENGITLHLE+EP ++   K+ QK+E KKSA LDNPEV+NTTDN +EVI+S+E  SESVR 
Sbjct: 181 ENGITLHLEEEPAIV--IKVNQKMETKKSADLDNPEVMNTTDNPHEVIMSEEIASESVRE 240

Query: 241 KKFKDVASAAQDAFQ-------ATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSS 300
           KKFKD ASAA++AFQ       A KA IE SRS+SQDI          H  E+ S ++SS
Sbjct: 241 KKFKDAASAAKEAFQSAAYAALAAKAAIELSRSESQDI----------HIEERNSDLESS 300

Query: 301 HKSKLNAEEASIPYSKIDHSDDFSFENTHLVELESCSSEYKYIE--ERNQEESPAEPAKE 310
           H+ K+N +                       ELESCSSEY+  +  E NQEE P EPAKE
Sbjct: 301 HEPKINPD-----------------------ELESCSSEYEDQDAAESNQEEFPEEPAKE 360

[Close]
BLAST of Carg07475 vs. NCBI nr
Match: XP_022148119.1 (uncharacterized protein LOC111016871 [Momordica charantia])

HSP 1 Score: 266.9 bits (681), Expect = 8.4e-68
Identity = 204/425 (48.00%), Postives = 232/425 (54.59%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLG+NR+LKPSKFKALANMAISRTAILKNQHQAR SLA+ DVLQLLNL  Q R
Sbjct: 1   MGRKLDALLGKNRHLKPSKFKALANMAISRTAILKNQHQARSSLARADVLQLLNLGHQHR 60

Query: 61  AQL--------------------------------------------------------- 120
           A+L                                                         
Sbjct: 61  AKLRVEIVIKESNMLDALGMIEDYCYLLMERVDLLRMSKECPGEVKEAISTLIFAASRCG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                      +QPS ETKLKVL+EIA 
Sbjct: 121 EFPELQEIRRIFELKFGREFASSAVDLRNNCGVRLKMIQKFSTKQPSIETKLKVLEEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 240
           ENGITLHLE+EP +  KE+L QKLEAK SA LDNPEVIN T+N++E +  +E  SE VRA
Sbjct: 181 ENGITLHLEEEPEITIKEQLNQKLEAKTSADLDNPEVINATNNLHEEMFKNE--SELVRA 240

Query: 241 KKFKDVASAAQDAFQ-------ATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSS 300
           KKF DVASAAQ+AFQ       A +A IE SRS+SQD+    ED S+  ++     MDSS
Sbjct: 241 KKFNDVASAAQEAFQSAAYAAVAARAAIELSRSESQDV----EDDSHLQRS-MTPDMDSS 300

Query: 301 HKSKLNAEEASIPYSKIDHSDD-FSFENTHLVELESCSSEYKYIEERNQE-------ESP 310
           H+ KLN EEAS P SKIDHSDD FSFE  H  E  S   E + I ERNQE       ESP
Sbjct: 301 HEPKLNIEEASTPPSKIDHSDDIFSFEKIHPDESSSSECEDEDIAERNQETHLEHAGESP 360

[Close]
BLAST of Carg07475 vs. TAIR10
Match: AT1G13340.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 0 

Query: 1  MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNL 56
          MG+KLDALLGR+   K +KFK+L  +A++R +ILKNQ QAR S A  DV +LL L
Sbjct: 1  MGKKLDALLGRS--FKTNKFKSLITLALTRLSILKNQRQARLSQAISDVTELLKL 53

[Close]
BLAST of Carg07475 vs. TrEMBL
Match: tr|A0A1S3CEY6|A0A1S3CEY6_CUCME (uncharacterized protein LOC103500154 OS=Cucumis melo OX=3656 GN=LOC103500154 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82
Identity = 211/413 (51.09%), Postives = 253/413 (61.26%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRNRYLKPSKFK LANMAISRT+ILKNQH+ARCSLA+ DVLQLLNL +Q R
Sbjct: 1   MGRKLDALLGRNRYLKPSKFKTLANMAISRTSILKNQHRARCSLARADVLQLLNLGYQHR 60

Query: 61  AQL--------------------------------------------------------- 120
           AQL                                                         
Sbjct: 61  AQLRVEIVIKENNMLDALGMIEDYCCLLVEKVALFQMNKECPGEVKEAISSLIFAASRCG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                      +QP+AETKLKVLKEIA 
Sbjct: 121 EFPELQEIRRIFELKFGTEFASSAIDLRNNCGVSPKMIQKFSTKQPTAETKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 240
           ENGI L+LE+EP +I KEKL QKLE KK A L NPEV NTTD+++EVI S++  SE V+A
Sbjct: 181 ENGIPLNLEEEPPIIVKEKLNQKLEVKKEADLYNPEVTNTTDDLHEVITSEKLASELVKA 240

Query: 241 KKFKDVASAAQDAFQATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSSHKSKLNA 300
           KKFKDVASAA++AFQ+    I F +S+SQDID DHEDGS+  KN K+S+++SS++SKLN 
Sbjct: 241 KKFKDVASAAEEAFQSAAKAINFLKSESQDIDSDHEDGSHLQKNGKSSELNSSYESKLNT 300

Query: 301 EEASIPYSKIDHSDD-FSFENTHLVELESCSSEYK--YIEERNQEESPAEPAKENMSSVP 310
           +EASIP SKID+SDD FSFE    V LESCSS+Y+   +EE NQEE P EPA E+ SSV 
Sbjct: 301 KEASIPSSKIDYSDDRFSFEKICPVGLESCSSQYEDADMEETNQEELPKEPAIESTSSVL 360

[Close]
BLAST of Carg07475 vs. TrEMBL
Match: tr|A0A0A0L6Y2|A0A0A0L6Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271380 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.8e-74
Identity = 202/420 (48.10%), Postives = 242/420 (57.62%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRNRYLK SKFK LANMAISRT+ILKN H+ARCSLA+ DVLQLLNL++Q R
Sbjct: 1   MGRKLDALLGRNRYLKASKFKTLANMAISRTSILKNHHRARCSLARADVLQLLNLSYQHR 60

Query: 61  AQL--------------------------------------------------------- 120
           AQL                                                         
Sbjct: 61  AQLRVEIVIKENNMLDALGMIEDYCCLLVEKVALLQMNKECPGEVKEAISSLIFAASRCG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                      +QPSAETKLKVLKEIA 
Sbjct: 121 EFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 240
           ENGI LHLE+E  +I K K  QKLE KK A L NPEV NTTD+++EVI S++  SE V++
Sbjct: 181 ENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVTNTTDDLHEVITSEKMASELVKS 240

Query: 241 KKFKDVASAAQDAFQ-------ATKAEIEFSRSKSQDIDIDHEDGSYFHKNEKASKMDSS 300
           KKFKDVASA ++ FQ       A KA I  S+SKSQDID DHEDGS+  KN K S ++SS
Sbjct: 241 KKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDIDSDHEDGSHLQKNGKGSDLNSS 300

Query: 301 HKSKLNAEEASIPYSKIDHSDD-FSFENTHLVELESCSSEYK--YIEERNQEESPAEPAK 310
           ++ KLN +E  I   KID+SDD FSFE    VELESCSS+Y+   +EE NQEE P EPAK
Sbjct: 301 YEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAK 360

[Close]
BLAST of Carg07475 vs. TrEMBL
Match: tr|A0A061EIJ4|A0A061EIJ4_THECC (Regulator of Vps4 activity in the MVB pathway protein, putative OS=Theobroma cacao OX=3641 GN=TCM_019471 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22
Identity = 130/410 (31.71%), Postives = 171/410 (41.71%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRN   K SKFK LA +AISR AILKNQHQ R S A+ DV+ LLNL  Q R
Sbjct: 1   MGRKLDALLGRN--FKASKFKTLAKLAISRIAILKNQHQVRFSHARSDVIDLLNLGHQER 60

Query: 61  AQL--------------------------------------------------------- 120
           A L                                                         
Sbjct: 61  ALLRVEHVIKEQNLVDALTIMESYCQLLIERVMLIQKNKECPDELKEATSSLMFASSRCG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                       QPS E KLKVLKEIA 
Sbjct: 121 EFPELLHIRRVVSSTFGKEFVARAVELRNNCSVHPKIVQKLSTRQPSLECKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKL-----KQKLEAKKSATLDNPEVINTTDNVYEVIISDESVS 240
           E GI LHLE +  V+ +EK+     + +  A KSA LD+PE   T   +   +  DE +S
Sbjct: 181 ERGIALHLEVDSPVVVEEKMDVHEKQNESTANKSANLDDPEYKYTAIELPREVNLDEKLS 240

Query: 241 ESVRA-KKFKDVASAAQDAFQA-------TKAEIEFSRSKSQDIDIDHEDGSYFHKNEKA 287
           ESV+A KK++DVA+AAQ+AF++           +E SR++SQD D D E GS   K   +
Sbjct: 241 ESVKARKKYRDVAAAAQEAFESXXXXXXXXXXXVELSRTESQDFDPDDESGSSHKKGGPS 300

[Close]
BLAST of Carg07475 vs. TrEMBL
Match: tr|A0A1R3IC51|A0A1R3IC51_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13135 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.9e-16
Identity = 107/338 (31.66%), Postives = 136/338 (40.24%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MGRKLDALLGRN   K SKFK L  +AISR AI KNQHQ R S A+ DV++LLNL    R
Sbjct: 1   MGRKLDALLGRN--FKTSKFKTLVKLAISRIAIFKNQHQVRFSHARSDVIELLNLGHHDR 60

Query: 61  AQL--------------------------------------------------------- 120
           A L                                                         
Sbjct: 61  ALLRVEHVIKEQNMVDAFAIMESYCHLLLERVMLIQKNKECPEELKVATACLMFASSRCG 120

Query: 121 -------------------------------------------EQPSAETKLKVLKEIAF 180
                                                        P  E KLKVLKEIA 
Sbjct: 121 EFPELLHIRGVVQSTFGKEFVVRAIELRNNCSVHPKIIQKLSTRPPRMEIKLKVLKEIAS 180

Query: 181 ENGITLHLEKEPTVINKEKLKQKLEAKKSATLDNPEVINTTDNVYEVIISDESVSESVRA 229
           E GITLHLE E  +    K  + + AKKSA  D+ +    T     +I  DE +SES++A
Sbjct: 181 EKGITLHLELEEELDVNGKQDESI-AKKSANSDDSDEQKDTAIELPMISLDEKLSESMKA 240

[Close]
BLAST of Carg07475 vs. TrEMBL
Match: tr|A0A022QTZ3|A0A022QTZ3_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011015mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.1e-15
Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 0 

Query: 1   MGRKLDALLGRNRYLKPSKFKALANMAISRTAILKNQHQARCSLAQPDVLQLLNLAFQPR 60
           MG+K+DALLGR+   K SK K+ A +A+SR ++LKNQ QARCS+ + DV++ L  +   R
Sbjct: 1   MGKKMDALLGRS--FKTSKLKSTAALAVSRLSVLKNQRQARCSVVRSDVVEFLKTSNHDR 60

Query: 61  AQL--------EQPSAETKLKVLKEIAFENGITLHL--EKEPTVINKEKLKQKLEAKKSA 120
           A L          P+ E K KVLKEIA +N I LHL  E E T  NKE+  Q     KS 
Sbjct: 61  ALLRIIQKLSTRMPTLEDKTKVLKEIASDNNIDLHLDHESETTAENKEEYSQ----HKST 120

Query: 121 TLDNPEVINTTDNVYEV-IISDESVSESVRAKKFKDVASAAQDAFQ-------ATKAEIE 180
           +  + +++      +++ ++  E        +K+KDVA AAQ AF+            +E
Sbjct: 121 SPSSGQLL------FDIPVVHSEGSERGSVGRKYKDVADAAQAAFEXXXXXXXXXXXXVE 180

Query: 181 FSRSKSQDIDIDHEDGSYFHKNEKASKMDSSHKSKLNAEEASIPYSKI 211
            SRS+S D           H+  K S   S  + +L   E  I Y KI
Sbjct: 181 LSRSESTD--------PPNHRPGKLSTAASFEEGRL--VETEIKYEKI 206

The following BLAST results are available for this feature:
BLAST of Carg07475 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008461584.11.6e-8251.09PREDICTED: uncharacterized protein LOC103500154 [Cucumis melo][more]
XP_011651369.12.7e-7448.10PREDICTED: uncharacterized protein LOC105434874 isoform X1 [Cucumis sativus] >KG... [more]
XP_022983568.11.6e-7148.69uncharacterized protein LOC111482134 [Cucurbita maxima][more]
XP_022934804.15.8e-6947.27uncharacterized protein LOC111441867 [Cucurbita moschata][more]
XP_022148119.18.4e-6848.00uncharacterized protein LOC111016871 [Momordica charantia][more]
BLAST of Carg07475 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13340.13.1e-0858.18Regulator of Vps4 activity in the MVB pathway protein[more]
BLAST of Carg07475 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg07475 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CEY6|A0A1S3CEY6_CUCME1.0e-8251.09uncharacterized protein LOC103500154 OS=Cucumis melo OX=3656 GN=LOC103500154 PE=... [more]
tr|A0A0A0L6Y2|A0A0A0L6Y2_CUCSA1.8e-7448.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271380 PE=4 SV=1[more]
tr|A0A061EIJ4|A0A061EIJ4_THECC1.2e-2231.71Regulator of Vps4 activity in the MVB pathway protein, putative OS=Theobroma cac... [more]
tr|A0A1R3IC51|A0A1R3IC51_COCAP2.9e-1631.66Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13135 PE=4 ... [more]
tr|A0A022QTZ3|A0A022QTZ3_ERYGU7.1e-1536.40Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011015mg PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07475-RACarg07475-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1260.60coord: 8..64
e-value: 1.3E-6
score: 29.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..309
NoneNo IPR availablePANTHERPTHR12161:SF16REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEINcoord: 65..291
NoneNo IPR availablePANTHERPTHR12161:SF16REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEINcoord: 1..63
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161UNCHARACTERIZED DUF292coord: 65..291
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161UNCHARACTERIZED DUF292coord: 1..63