CsaV3_3G020580 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G020580
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionIST1 homolog
Locationchr3 : 16692122 .. 16694745 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCCGCCTGCTAATACCTCCATAGTCAATTCTGTTTGAACCATTCAAAGCCTGGAAATTTCACTAATCAACGCCTATTTCAAAGTCAATAATGGGAGCCAATTCTCTGACCTGCTTTAAGGAAAAAATAAATAAATTATGCATGTGAATGTTGGTAAAATAGTTAATCATGCATCTTCCCTATAAAACACAGGCAATGTCCGCAACCAACAACCAAAAAGTAGTTCATTCAAGAGCTTTTCACAGGCAAACAAGCAGCAAACAGAATTTAAGGTTTTTCCATCATGGGAAGGAAACTGGATGCTTTACTGGGAAGGAATAGATATTTGAAGGCTTCCAAGTTTAAGACCCTTGCTAATATGGCCATTTCTAGGACTTCCATCCTAAAAAACCACCACCGCGCCCGTTGCTCCCTAGCTCGTGCCGATGTTCTTCAACTGTTGAATCTTAGTTACCAACATCGTGCTCAGCTTAGAGTAAATTTTTTCTCTCTCTCTTTCAGAACTCTATAGTTCAGCCCCTTCTCATTTTTTTCTTTTTTTCCAACCGCTGAGCTTGGATGTGAACGTTAATGAACAGGTTGAGATTGTGATCAAGGAGAATAACATGTTGGATGCTCTTGGAATGATAGAGGATTACTGCTGCCTTCTCGTAGAAAAGGTGGCTCTTCTTCAGATGAACAAGTAGGTCACCTTTCTTTCCTAGAATTTCACTATGTCATTTTTGTCAACTTTGGATGCAGGCCTTTTAAAAGATTTGAAACCTTTTCTGATTCTCTTTCGGCTTAAATGCAGGGAATGCCCTGGCGAAGTTAAGGAGGCGATATCGAGTCTGATATTTGCAGCTTCAAGGTGCGGAGAGTTTCCAGAACTTCAAGAGATTCGTCGGATTTTCGAGTTGAAGTTTGGTGCGGAGTTTGCAAGCAGTGCCATTGATTTACGCAACAACTGTGGTGTTAGTACCAAGGTGAGTTTGATACTTACCAACTGCAAGAAACGAATTAGTTGTTCGAATATATAATCTCCACTTAATAACCACAGTTTCCATATTACAGATGATTCAAAAGTTTTCAACAAAACAGCCCAGTGCCGAAACTAAACTGAAAGTGCTAAAGGAAATTGCTTCAGAAAATGGCATTCCTCTCCATTTAGAGCAAGAATCACCAATAATCATCAAGGTGAGGAAATATCTTTTTTTTTTTTTTAATTATAATGAAAAGAAACATTTCATTCATATGATAGTGAAGAGCCCCAAACATCAAAAAAGGTGATTACATAAGGGAGCGCCAATTGCTAACTAAAAAATATAAGCTTGAATGGAAAGGTGCTTTATTTTAAACTAAGAAAAAGCGATTAGAAGAGGAAAAAGTGTCACCAAAGAGCCGTATGTTCCTCACCTTGATAGAAAATGAGTGCTTCTACTTCCTAAGTTAACTTTTTAGTAAAAAATTCATCTGTTAACTGCAGGCAAAGCAAAACCAAAAGTTGGAAATCAAGAAAGAAGCAGATTTGTATAATCCTGAAGTCACAAACACCACAGATGATCTACATGAAGTTATTACAAGTGAAAAGATGGCATCGGAATTAGTGAAATCAAAGAAGTTTAAAGATGTAGCTAGTGCCACTGAAGAACCCTTCCAATCGGCAGCTTATGCAGCATTAGCAGCTAAAGCTGCAATCAACCTTTCAAAGTCCAAATCACAGGATATTGATTCAGATCATGAAGATGGCTCTCATCTACAAAAGAATGGAAAAGGCTCAGATTTGAATAGTTCTTATGAACCTAAGCTTAATACAAAAGAAGAAAGAATATCTTCCTGTAAGATTGACTATTCAGACGACAGATTTAGTTTTGAAAAGATTTGTCCTGTTGAACTTGAAAGTTGCAGTTCTCAATATGAAGATGCTGACATGGAAGAAACCAATCAAGAAGAGTTACCAAAAGAACCTGCCAAAGAAAGCACATCCTTTGCTCTAAAAGATTCAGATGTTAACAATATGAAGGAGCAATCATCAAAACCAAATTCAATCTTCTACAACGAGTCAGACGGCGACAAGATAACCAATACAGATAATGAAGTTGCCAGTGGAAAAGAAATTTCAGAAGAAGATATAAGAGTTCACGAATCAAAGTAAATTTATTGGCTAGTCACATCTAGATTGGAAGGAAACGTGTAGTGAAACTTTTGGACCCAGT

mRNA sequence

ATGTCATTTTTGTCAACTTTGGATGCAGGCCTTTTAAAAGATTTGAAACCTTTTCTGATTCTCTTTCGGCTTAAATGCAGGGAATGCCCTGGCGAAGTTAAGGAGGCGATATCGAGTCTGATATTTGCAGCTTCAAGGTGCGGAGAGTTTCCAGAACTTCAAGAGATTCGTCGGATTTTCGAGTTGAAGTTTGGTGCGGAGTTTGCAAGCAGTGCCATTGATTTACGCAACAACTGTGGTGTTAGTACCAAGATGATTCAAAAGTTTTCAACAAAACAGCCCAGTGCCGAAACTAAACTGAAAGTGCTAAAGGAAATTGCTTCAGAAAATGGCATTCCTCTCCATTTAGAGCAAGAATCACCAATAATCATCAAGGCAAAGCAAAACCAAAAGTTGGAAATCAAGAAAGAAGCAGATTTGTATAATCCTGAAGTCACAAACACCACAGATGATCTACATGAAGTTATTACAAGTGAAAAGATGGCATCGGAATTAGTGAAATCAAAGAAGTTTAAAGATGTAGCTAGTGCCACTGAAGAACCCTTCCAATCGGCAGCTTATGCAGCATTAGCAGCTAAAGCTGCAATCAACCTTTCAAAGTCCAAATCACAGGATATTGATTCAGATCATGAAGATGGCTCTCATCTACAAAAGAATGGAAAAGGCTCAGATTTGAATAGTTCTTATGAACCTAAGCTTAATACAAAAGAAGAAAGAATATCTTCCTGTAAGATTGACTATTCAGACGACAGATTTAGTTTTGAAAAGATTTGTCCTGTTGAACTTGAAAGTTGCAGTTCTCAATATGAAGATGCTGACATGGAAGAAACCAATCAAGAAGAGTTACCAAAAGAACCTGCCAAAGAAAGCACATCCTTTGCTCTAAAAGATTCAGATGTTAACAATATGAAGGAGCAATCATCAAAACCAAATTCAATCTTCTACAACGAGTCAGACGGCGACAAGATAACCAATACAGATAATGAAGTTGCCAGTGGAAAAGAAATTTCAGAAGAAGATATAAGAGTTCACGAATCAAAGTAA

Coding sequence (CDS)

ATGTCATTTTTGTCAACTTTGGATGCAGGCCTTTTAAAAGATTTGAAACCTTTTCTGATTCTCTTTCGGCTTAAATGCAGGGAATGCCCTGGCGAAGTTAAGGAGGCGATATCGAGTCTGATATTTGCAGCTTCAAGGTGCGGAGAGTTTCCAGAACTTCAAGAGATTCGTCGGATTTTCGAGTTGAAGTTTGGTGCGGAGTTTGCAAGCAGTGCCATTGATTTACGCAACAACTGTGGTGTTAGTACCAAGATGATTCAAAAGTTTTCAACAAAACAGCCCAGTGCCGAAACTAAACTGAAAGTGCTAAAGGAAATTGCTTCAGAAAATGGCATTCCTCTCCATTTAGAGCAAGAATCACCAATAATCATCAAGGCAAAGCAAAACCAAAAGTTGGAAATCAAGAAAGAAGCAGATTTGTATAATCCTGAAGTCACAAACACCACAGATGATCTACATGAAGTTATTACAAGTGAAAAGATGGCATCGGAATTAGTGAAATCAAAGAAGTTTAAAGATGTAGCTAGTGCCACTGAAGAACCCTTCCAATCGGCAGCTTATGCAGCATTAGCAGCTAAAGCTGCAATCAACCTTTCAAAGTCCAAATCACAGGATATTGATTCAGATCATGAAGATGGCTCTCATCTACAAAAGAATGGAAAAGGCTCAGATTTGAATAGTTCTTATGAACCTAAGCTTAATACAAAAGAAGAAAGAATATCTTCCTGTAAGATTGACTATTCAGACGACAGATTTAGTTTTGAAAAGATTTGTCCTGTTGAACTTGAAAGTTGCAGTTCTCAATATGAAGATGCTGACATGGAAGAAACCAATCAAGAAGAGTTACCAAAAGAACCTGCCAAAGAAAGCACATCCTTTGCTCTAAAAGATTCAGATGTTAACAATATGAAGGAGCAATCATCAAAACCAAATTCAATCTTCTACAACGAGTCAGACGGCGACAAGATAACCAATACAGATAATGAAGTTGCCAGTGGAAAAGAAATTTCAGAAGAAGATATAAGAGTTCACGAATCAAAGTAA

Protein sequence

MSFLSTLDAGLLKDLKPFLILFRLKCRECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNTDNEVASGKEISEEDIRVHESK
BLAST of CsaV3_3G020580 vs. NCBI nr
Match: XP_011651369.1 (PREDICTED: uncharacterized protein LOC105434874 isoform X1 [Cucumis sativus] >KGN57745.1 hypothetical protein Csa_3G271380 [Cucumis sativus])

HSP 1 Score: 604.0 bits (1556), Expect = 3.3e-169
Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           +ECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI
Sbjct: 99  KECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 158

Query: 87  QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 146
           QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT
Sbjct: 159 QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 218

Query: 147 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 206
           NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI
Sbjct: 219 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 278

Query: 207 DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS 266
           DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS
Sbjct: 279 DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS 338

Query: 267 SQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNT 326
           SQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNT
Sbjct: 339 SQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNT 398

Query: 327 DNEVASGKEISEEDIRVHESK 348
           DNEVASGKEISEEDIRVHESK
Sbjct: 399 DNEVASGKEISEEDIRVHESK 419

BLAST of CsaV3_3G020580 vs. NCBI nr
Match: XP_008461584.1 (PREDICTED: uncharacterized protein LOC103500154 [Cucumis melo])

HSP 1 Score: 500.7 bits (1288), Expect = 3.9e-138
Identity = 280/347 (80.69%), Postives = 301/347 (86.74%), Query Frame = 0

Query: 7   LDA-GLLKDLKPFLI----LFRLKCRECPGEVKEAISSLIFAASRCGEFPELQEIRRIFE 66
           LDA G+++D    L+    LF++  +ECPGEVKEAISSLIFAASRCGEFPELQEIRRIFE
Sbjct: 75  LDALGMIEDYCCLLVEKVALFQMN-KECPGEVKEAISSLIFAASRCGEFPELQEIRRIFE 134

Query: 67  LKFGAEFASSAIDLRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESP 126
           LKFG EFASSAIDLRNNCGVS KMIQKFSTKQP+AETKLKVLKEIASENGIPL+LE+E P
Sbjct: 135 LKFGTEFASSAIDLRNNCGVSPKMIQKFSTKQPTAETKLKVLKEIASENGIPLNLEEEPP 194

Query: 127 IIIKAKQNQKLEIKKEADLYNPEVTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEP 186
           II+K K NQKLE+KKEADLYNPEVTNTTDDLHEVITSEK+ASELVK+KKFKDVASA EE 
Sbjct: 195 IIVKEKLNQKLEVKKEADLYNPEVTNTTDDLHEVITSEKLASELVKAKKFKDVASAAEEA 254

Query: 187 FQSAAYAALAAKAAINLSKSKSQDIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERIS 246
           FQSAA        AIN  KS+SQDIDSDHEDGSHLQKNGK S+LNSSYE KLNTKE  I 
Sbjct: 255 FQSAA-------KAINFLKSESQDIDSDHEDGSHLQKNGKSSELNSSYESKLNTKEASIP 314

Query: 247 SCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAKESTSFALK-DSDV 306
           S KIDYSDDRFSFEKICPV LESCSSQYEDADMEETNQEELPKEPA ESTS  L   SD+
Sbjct: 315 SSKIDYSDDRFSFEKICPVGLESCSSQYEDADMEETNQEELPKEPAIESTSSVLNLCSDI 374

Query: 307 NNMKEQSSKPNSIFYNESDGDKITNTDNEVASGKEISEEDIRVHESK 348
           NN KEQSS+PNS FYNESDGDKI + DNEVASGKEISEE+I+VHE K
Sbjct: 375 NNTKEQSSEPNSTFYNESDGDKIISKDNEVASGKEISEENIKVHEPK 413

BLAST of CsaV3_3G020580 vs. NCBI nr
Match: XP_011651370.1 (PREDICTED: uncharacterized protein LOC105434874 isoform X2 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 4.1e-95
Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           +ECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI
Sbjct: 99  KECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 158

Query: 87  QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 146
           QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT
Sbjct: 159 QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 218

Query: 147 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 206
           NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI
Sbjct: 219 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 278

Query: 207 DSDHEDGSHL 217
           DSDHEDGSHL
Sbjct: 279 DSDHEDGSHL 288

BLAST of CsaV3_3G020580 vs. NCBI nr
Match: XP_022983568.1 (uncharacterized protein LOC111482134 [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 1.5e-94
Identity = 214/324 (66.05%), Postives = 245/324 (75.62%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           +ECPGEVKEAISSLIFA+SR GEFPELQEIRRIFELKFG EFA SAIDLRNNCGVS KMI
Sbjct: 99  KECPGEVKEAISSLIFASSRFGEFPELQEIRRIFELKFGKEFAGSAIDLRNNCGVSPKMI 158

Query: 87  QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 146
           QKFSTKQP+AETKLKVLKEIASENGI LHLE+E  I+IK   NQKLE KK ADL NPEV 
Sbjct: 159 QKFSTKQPNAETKLKVLKEIASENGITLHLEEEPAIVIKV--NQKLETKKSADLDNPEVI 218

Query: 147 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 206
           NTTD+ HEVI SE+ ASE V++KKFKD ASA +E FQSAAYAALAAKAAI LS+S+SQDI
Sbjct: 219 NTTDNPHEVIMSEETASESVRAKKFKDAASAAQEAFQSAAYAALAAKAAIELSRSESQDI 278

Query: 207 DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS 266
                   H+++  + SDL SS+EPK+N                        P ELESCS
Sbjct: 279 --------HIEE--RNSDLESSHEPKIN------------------------PDELESCS 338

Query: 267 SQYEDADMEETNQEELPKEPAKE-STSFALKDSDVNNMKEQ--SSKPNSIFYNESDGDKI 326
           S+YED D  E+NQEELP+EPAKE   S    DSD++NMKE+  SSKPNSI +NE + DK+
Sbjct: 339 SEYEDQDAAESNQEELPEEPAKEIMLSDPNLDSDISNMKEKSSSSKPNSISHNEPESDKL 386

Query: 327 TNTDNEVASGKEISEEDIRVHESK 348
           T+ ++EV S  +ISEEDIRV ESK
Sbjct: 399 TSKEDEVVSKNKISEEDIRVEESK 386

BLAST of CsaV3_3G020580 vs. NCBI nr
Match: XP_022934804.1 (uncharacterized protein LOC111441867 [Cucurbita moschata])

HSP 1 Score: 351.3 bits (900), Expect = 3.8e-93
Identity = 211/324 (65.12%), Postives = 244/324 (75.31%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           +ECPGEVKEAISSLIFA+SR GEFPELQEIRRIFELKFG EFASSA++LRNNCGVS KMI
Sbjct: 99  KECPGEVKEAISSLIFASSRFGEFPELQEIRRIFELKFGKEFASSAVNLRNNCGVSPKMI 158

Query: 87  QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 146
           QKFSTKQP+AETKLKVLKEIASENGI LHLE+E  I+IK   NQK+E KK ADL NPEV 
Sbjct: 159 QKFSTKQPNAETKLKVLKEIASENGITLHLEEEPAIVIKV--NQKMETKKSADLDNPEVM 218

Query: 147 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 206
           NTTD+ HEVI SE++ASE V+ KKFKD ASA +E FQSAAYAALAAKAAI LS+S+SQDI
Sbjct: 219 NTTDNPHEVIMSEEIASESVREKKFKDAASAAKEAFQSAAYAALAAKAAIELSRSESQDI 278

Query: 207 DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS 266
                   H+++  + SDL SS+EPK+N                        P ELESCS
Sbjct: 279 --------HIEE--RNSDLESSHEPKIN------------------------PDELESCS 338

Query: 267 SQYEDADMEETNQEELPKEPAKE-STSFALKDSDVNNMKEQ--SSKPNSIFYNESDGDKI 326
           S+YED D  E+NQEE P+EPAKE   S    DSDV+N+KEQ  SSKPNSI +NE + DK+
Sbjct: 339 SEYEDQDAAESNQEEFPEEPAKEIMLSDPNLDSDVSNLKEQSSSSKPNSISHNEPESDKL 386

Query: 327 TNTDNEVASGKEISEEDIRVHESK 348
            + ++EV S  +ISEEDIRV ESK
Sbjct: 399 MSKEDEVVSKNKISEEDIRVEESK 386

BLAST of CsaV3_3G020580 vs. TAIR10
Match: AT1G13340.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 112.8 bits (281), Expect = 4.1e-25
Identity = 54/94 (57.45%), Postives = 71/94 (75.53%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           R+CP E+ EA+S L+FAASR GEFPELQEIR +   +FG + A+ +I+LR+NCGV  K+I
Sbjct: 97  RDCPEELLEAVSGLLFAASRIGEFPELQEIRNVLISRFGKDLAARSIELRSNCGVDPKII 156

Query: 87  QKFSTKQPSAETKLKVLKEIASENGIPLHLEQES 121
           QK ST+ P  E ++K LKEIA+EN I L L+Q S
Sbjct: 157 QKLSTRPPPKEVRMKALKEIAAENNIVLKLDQAS 190

BLAST of CsaV3_3G020580 vs. TAIR10
Match: AT4G35730.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-19
Identity = 68/203 (33.50%), Postives = 103/203 (50.74%), Query Frame = 0

Query: 19  LILFRL----KCRECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAID 78
           LI+ RL    K ++CP ++KE I+SLIFAA RC E PEL ++R IF  K+G +F S+A D
Sbjct: 98  LIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDLRDIFAKKYGKDFVSAATD 157

Query: 79  LRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEI 138
           LR +CGV+  +I K S + P  E KLK++KEIA E  +     +    ++K ++      
Sbjct: 158 LRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKEFQVDWDTTETEQELLKPQEESIDGP 217

Query: 139 KKEADLYNPEVTNT--TDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAA 198
           +K     +  V      + +       +  S +  +  + D  SA E   + A  A  AA
Sbjct: 218 RKFVSASSLPVNRAAINEPIDPTKAVPRSTSSMSINTHYHDTESAAEAATELAKQAVAAA 277

Query: 199 KAAINL-----SKSKSQDIDSDH 211
           + A  L     S +K   + SDH
Sbjct: 278 QVASLLATRRDSSNKEFSVSSDH 300

BLAST of CsaV3_3G020580 vs. TAIR10
Match: AT1G25420.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 86.3 bits (212), Expect = 4.1e-17
Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           +ECP E++EAI+S+IFAA RC E P+L +I+ +F  K+G EF   A +LR + GV+  +I
Sbjct: 96  KECPRELREAIASIIFAAPRCSEVPDLLQIKNLFGTKYGKEFIMVASELRPDSGVNRTII 155

Query: 87  QKFSTKQPSAETKLKVLKEIASE 110
           +K S   PS   +LK+LKEIA E
Sbjct: 156 EKLSPTSPSGAARLKMLKEIAQE 178

BLAST of CsaV3_3G020580 vs. TAIR10
Match: AT2G19710.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 82.8 bits (203), Expect = 4.6e-16
Identity = 36/86 (41.86%), Postives = 60/86 (69.77%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           + CP ++KEA++S++FA+ R  + PEL EI + F  K+G +F++SA++LR + GVS  ++
Sbjct: 93  KNCPIDLKEAVTSVLFASQRLSDVPELSEIFKQFTTKYGKDFSTSAVELRPDSGVSRLLV 152

Query: 87  QKFSTKQPSAETKLKVLKEIASENGI 113
           +K S K P   TK+K+L  IA E+ +
Sbjct: 153 EKLSAKAPDGPTKVKILMAIAEEHNV 178

BLAST of CsaV3_3G020580 vs. TAIR10
Match: AT4G29440.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-14
Identity = 34/91 (37.36%), Postives = 60/91 (65.93%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           + CP ++KEA++S+++A+ R  +  EL +I + F  K+G +F S+AI L+ + GVS  ++
Sbjct: 93  KTCPNDLKEAVASVLYASQRLTDVGELSDIVKHFSAKYGKDFVSAAIGLQPDSGVSRLLV 152

Query: 87  QKFSTKQPSAETKLKVLKEIASENGIPLHLE 118
           +K S K P   TK+K+L EIA+++ +    E
Sbjct: 153 EKLSVKAPDGPTKIKILTEIATQHNVTWEAE 183

BLAST of CsaV3_3G020580 vs. TrEMBL
Match: tr|A0A0A0L6Y2|A0A0A0L6Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271380 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 2.2e-169
Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0

Query: 27  RECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 86
           +ECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI
Sbjct: 99  KECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTKMI 158

Query: 87  QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 146
           QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT
Sbjct: 159 QKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAKQNQKLEIKKEADLYNPEVT 218

Query: 147 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 206
           NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI
Sbjct: 219 NTTDDLHEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINLSKSKSQDI 278

Query: 207 DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS 266
           DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS
Sbjct: 279 DSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERISSCKIDYSDDRFSFEKICPVELESCS 338

Query: 267 SQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNT 326
           SQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNT
Sbjct: 339 SQYEDADMEETNQEELPKEPAKESTSFALKDSDVNNMKEQSSKPNSIFYNESDGDKITNT 398

Query: 327 DNEVASGKEISEEDIRVHESK 348
           DNEVASGKEISEEDIRVHESK
Sbjct: 399 DNEVASGKEISEEDIRVHESK 419

BLAST of CsaV3_3G020580 vs. TrEMBL
Match: tr|A0A1S3CEY6|A0A1S3CEY6_CUCME (uncharacterized protein LOC103500154 OS=Cucumis melo OX=3656 GN=LOC103500154 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 2.6e-138
Identity = 280/347 (80.69%), Postives = 301/347 (86.74%), Query Frame = 0

Query: 7   LDA-GLLKDLKPFLI----LFRLKCRECPGEVKEAISSLIFAASRCGEFPELQEIRRIFE 66
           LDA G+++D    L+    LF++  +ECPGEVKEAISSLIFAASRCGEFPELQEIRRIFE
Sbjct: 75  LDALGMIEDYCCLLVEKVALFQMN-KECPGEVKEAISSLIFAASRCGEFPELQEIRRIFE 134

Query: 67  LKFGAEFASSAIDLRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESP 126
           LKFG EFASSAIDLRNNCGVS KMIQKFSTKQP+AETKLKVLKEIASENGIPL+LE+E P
Sbjct: 135 LKFGTEFASSAIDLRNNCGVSPKMIQKFSTKQPTAETKLKVLKEIASENGIPLNLEEEPP 194

Query: 127 IIIKAKQNQKLEIKKEADLYNPEVTNTTDDLHEVITSEKMASELVKSKKFKDVASATEEP 186
           II+K K NQKLE+KKEADLYNPEVTNTTDDLHEVITSEK+ASELVK+KKFKDVASA EE 
Sbjct: 195 IIVKEKLNQKLEVKKEADLYNPEVTNTTDDLHEVITSEKLASELVKAKKFKDVASAAEEA 254

Query: 187 FQSAAYAALAAKAAINLSKSKSQDIDSDHEDGSHLQKNGKGSDLNSSYEPKLNTKEERIS 246
           FQSAA        AIN  KS+SQDIDSDHEDGSHLQKNGK S+LNSSYE KLNTKE  I 
Sbjct: 255 FQSAA-------KAINFLKSESQDIDSDHEDGSHLQKNGKSSELNSSYESKLNTKEASIP 314

Query: 247 SCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAKESTSFALK-DSDV 306
           S KIDYSDDRFSFEKICPV LESCSSQYEDADMEETNQEELPKEPA ESTS  L   SD+
Sbjct: 315 SSKIDYSDDRFSFEKICPVGLESCSSQYEDADMEETNQEELPKEPAIESTSSVLNLCSDI 374

Query: 307 NNMKEQSSKPNSIFYNESDGDKITNTDNEVASGKEISEEDIRVHESK 348
           NN KEQSS+PNS FYNESDGDKI + DNEVASGKEISEE+I+VHE K
Sbjct: 375 NNTKEQSSEPNSTFYNESDGDKIISKDNEVASGKEISEENIKVHEPK 413

BLAST of CsaV3_3G020580 vs. TrEMBL
Match: tr|A0A061EIJ4|A0A061EIJ4_THECC (Regulator of Vps4 activity in the MVB pathway protein, putative OS=Theobroma cacao OX=3641 GN=TCM_019471 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 131/329 (39.82%), Postives = 191/329 (58.05%), Query Frame = 0

Query: 25  KCRECPGEVKEAISSLIFAASRCGEFPELQEIRRIFELKFGAEFASSAIDLRNNCGVSTK 84
           K +ECP E+KEA SSL+FA+SRCGEFPEL  IRR+    FG EF + A++LRNNC V  K
Sbjct: 95  KNKECPDELKEATSSLMFASSRCGEFPELLHIRRVVSSTFGKEFVARAVELRNNCSVHPK 154

Query: 85  MIQKFSTKQPSAETKLKVLKEIASENGIPLHLEQESPIIIKAK-----QNQKLEIKKEAD 144
           ++QK ST+QPS E KLKVLKEIASE GI LHLE +SP++++ K     +  +    K A+
Sbjct: 155 IVQKLSTRQPSLECKLKVLKEIASERGIALHLEVDSPVVVEEKMDVHEKQNESTANKSAN 214

Query: 145 LYNPEVTNTTDDL-HEVITSEKMASELVKSKKFKDVASATEEPFQSAAYAALAAKAAINL 204
           L +PE   T  +L  EV   EK++  +   KK++DVA+A +E F+S           + L
Sbjct: 215 LDDPEYKYTAIELPREVNLDEKLSESVKARKKYRDVAAAAQEAFESXXXXXXXXXXXVEL 274

Query: 205 SKSKSQDIDSDHEDGSHLQKNG----KGS--DLNSSYEPKLNTKEERISSCKIDYSDDRF 264
           S+++SQD D D E GS  +K G    KG+  D ++S  P+    E   ++  I++ ++  
Sbjct: 275 SRTESQDFDPDDESGSSHKKGGPSLKKGAFYDSDASATPEFQGYE---AADGIEHPNNEL 334

Query: 265 SFEKICPVELESCSSQYEDADMEETNQ-------EELPKEP-AKESTSFALKDSDVNNMK 324
            FEKI P+  ++ SS+ E  DM +TN        EE+ +    + + S +  DSDV+   
Sbjct: 335 GFEKIHPI--DNYSSESEGEDMTKTNNGLELNEIEEIEQRVWIERALSTSSSDSDVDIST 394

Query: 325 EQSSKPNSIFYNESDGDK----ITNTDNE 330
           E+    + +  NE  GD+    + N D E
Sbjct: 395 ERKLSSDQLRQNEQLGDELAIDLVNNDRE 418

BLAST of CsaV3_3G020580 vs. TrEMBL
Match: tr|A0A067F674|A0A067F674_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010606mg PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39
Identity = 130/348 (37.36%), Postives = 213/348 (61.21%), Query Frame = 0

Query: 4   LSTLDA-GLLKDLKPFLI---LFRLKCRECPGEVKEAISSLIFAASRCGEFPELQEIRRI 63
           L+ LDA G+++D    LI   L   K +ECP E+KEAIS LIFA+SRCG+FPELQ+IR I
Sbjct: 70  LNMLDALGMIEDYCHLLIERVLLIQKNKECPDELKEAISGLIFASSRCGDFPELQKIREI 129

Query: 64  FELKFGAEFASSAIDLRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIASENGIP-LHLEQ 123
           F+ ++GAEF + A++LRN CGV+ K++QK S+++ S E++LKVLKEI++E GI  L+LE+
Sbjct: 130 FKSRYGAEFDARAVELRNYCGVTPKIVQKLSSRRCSLESRLKVLKEISTEMGIALLNLEE 189

Query: 124 ESPIIIKAKQN--QKLEIKKEADLYNPEVTNTTDDLHEVITSEKMASELVKSKKFKDVAS 183
           ++ + +K K +  QK     E   +N +  N  ++L+     EK++  + + K ++DVA+
Sbjct: 190 DTRVPVKEKSDIEQKQPKPMEPATFNDDAHNVPEELNR---DEKLSESVKRRKYYRDVAA 249

Query: 184 ATEEPFQSAAYAALAAKAAINLSKSKSQDIDSDHEDG-SHLQKNGKGSDLNSSYEPKLNT 243
           A ++ F+SAAYAA AA+AA +LS+S+S+D +SD   G SH  +    SD++ + +  L +
Sbjct: 250 AAQDAFESAAYAAEAARAAFDLSRSESRDNNSDDFGGYSHGTEIASNSDMSMTSD--LKS 309

Query: 244 KEERISSCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAKESTSFAL 303
            ++ + + + + S  R  F++    +++S SS+  D D+ E  +E   KE  +ES   A+
Sbjct: 310 DKDAVINEEDEDSKSRMGFDQF--YDVDSFSSESGDEDVTEKTREIHFKE-LEESERTAV 369

Query: 304 K---------DSDVNNMKEQSSKPNSIFYNESDGDKITNTDNEVASGK 335
           +         DSD N +        + + N+  G  + + D +  SGK
Sbjct: 370 RERILSASSSDSDGNILSMTKKLAGAHYRNQEGGIAVASDDTDNDSGK 409

BLAST of CsaV3_3G020580 vs. TrEMBL
Match: tr|A0A2H5NUW7|A0A2H5NUW7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_078300 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 132/350 (37.71%), Postives = 214/350 (61.14%), Query Frame = 0

Query: 4   LSTLDA-GLLKDLKPFLI---LFRLKCRECPGEVKEAISSLIFAASRCGEFPELQEIRRI 63
           L+ LDA G+++D    LI   L   K +ECP E+KEAIS LIFA+SRCG+FPELQ+IR I
Sbjct: 70  LNMLDALGMIEDYCHLLIERVLLIQKNKECPDELKEAISGLIFASSRCGDFPELQKIREI 129

Query: 64  FELKFGAEFASSAIDLRNNCGVSTKMIQKFSTKQPSAETKLKVLKEIASENGIP-LHLEQ 123
           F  ++GAEF + A++LRN CGV+ K++QK S+++ S E++LKVLKEI++E GI  L+LE+
Sbjct: 130 FRSRYGAEFDARAVELRNYCGVTPKIVQKLSSRRCSLESRLKVLKEISTEMGIALLNLEE 189

Query: 124 ESPIIIKAKQNQKLEIKKEADLYNPEVTNTTDDLH----EVITSEKMASELVKSKKFKDV 183
           ++ + +K    +KL+I+++      E  N  DD H    E+   EK++  + + K ++DV
Sbjct: 190 DTRVPVK----EKLDIEQKQP-KPMEPANFKDDAHNVPEELNRDEKLSESVKRRKYYRDV 249

Query: 184 ASATEEPFQSAAYAALAAKAAINLSKSKSQDIDSDHEDG-SHLQKNGKGSDLNSSYEPKL 243
           A+A ++ F+SAAYAA AA+AA +LS+S+S+D +SD   G SH  +    SD++ + +  L
Sbjct: 250 AAAAQDAFESAAYAAEAARAAFDLSRSESRDNNSDDFGGYSHGTEIASNSDMSMTSD--L 309

Query: 244 NTKEERISSCKIDYSDDRFSFEKICPVELESCSSQYEDADMEETNQEELPKEPAKESTSF 303
            + ++ + + + + S  R  F+K    +++S SS+  D D+ E  +E   KE  +ES   
Sbjct: 310 KSDKDAVINEEDEDSKSRMGFDKF--YDVDSFSSESGDEDVTEKTREIHFKE-LEESERT 369

Query: 304 ALK---------DSDVNNMKEQSSKPNSIFYNESDGDKITNTDNEVASGK 335
           A++         DSD + +        + + N+  G  + + D +  SGK
Sbjct: 370 AVRERILSASSSDSDGDILSMTKKLAGAHYRNQEGGIAVASDDTDNDSGK 409

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011651369.13.3e-16999.69PREDICTED: uncharacterized protein LOC105434874 isoform X1 [Cucumis sativus] >KG... [more]
XP_008461584.13.9e-13880.69PREDICTED: uncharacterized protein LOC103500154 [Cucumis melo][more]
XP_011651370.14.1e-9599.47PREDICTED: uncharacterized protein LOC105434874 isoform X2 [Cucumis sativus][more]
XP_022983568.11.5e-9466.05uncharacterized protein LOC111482134 [Cucurbita maxima][more]
XP_022934804.13.8e-9365.12uncharacterized protein LOC111441867 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G13340.14.1e-2557.45Regulator of Vps4 activity in the MVB pathway protein[more]
AT4G35730.11.2e-1933.50Regulator of Vps4 activity in the MVB pathway protein[more]
AT1G25420.14.1e-1749.40Regulator of Vps4 activity in the MVB pathway protein[more]
AT2G19710.14.6e-1641.86Regulator of Vps4 activity in the MVB pathway protein[more]
AT4G29440.12.5e-1437.36Regulator of Vps4 activity in the MVB pathway protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L6Y2|A0A0A0L6Y2_CUCSA2.2e-16999.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271380 PE=4 SV=1[more]
tr|A0A1S3CEY6|A0A1S3CEY6_CUCME2.6e-13880.69uncharacterized protein LOC103500154 OS=Cucumis melo OX=3656 GN=LOC103500154 PE=... [more]
tr|A0A061EIJ4|A0A061EIJ4_THECC7.0e-4339.82Regulator of Vps4 activity in the MVB pathway protein, putative OS=Theobroma cac... [more]
tr|A0A067F674|A0A067F674_CITSI2.7e-3937.36Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010606mg PE=4 SV=1[more]
tr|A0A2H5NUW7|A0A2H5NUW7_CITUN1.8e-3837.71Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_078300 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
biological_process GO:0006950 response to stress
biological_process GO:0045087 innate immune response
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0006952 defense response
biological_process GO:0050789 regulation of biological process
biological_process GO:0044763 single-organism cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020580.1CsaV3_3G020580.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1260.60coord: 19..122
e-value: 6.5E-31
score: 109.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..331
NoneNo IPR availablePANTHERPTHR12161:SF16REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEINcoord: 27..308
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 27..113
e-value: 1.2E-27
score: 96.7
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161UNCHARACTERIZED DUF292coord: 27..308