Carg07236 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07236
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein
Location	Cucurbita_argyrosperma_scaffold_017 : 834742 .. 836558 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCCCTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCTTCCGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTCAATGTTTATGCAGGCTGTTGTCTCGGTTGCCTGCATTCTTAGAGAGGCCTCAACATAAAATCTCTTTTTCTGTTGGCGGTTCATGCAATGCTACATTCTCATGCGGAGGAGGAACCATAATTTAAGAAAAAAATTTCGGGTTATGCTCGAGTCATAGTGTGATTCAGTCCCTCATCTTTCTCAGTGTTGGATTTTCATGTCTGTGCTGTGTTGATGTTATATGATTCACTAGTTCTGTTGTTAAGAAATACAAATGTCACTTAAAACAGTTTCTAAATGGTGTTCGTATAGGTTCCAAAGTTAGGGGGTTATTAGGTTCAAATACAACTAAAAATGCACCAAAGATGTCAAGGACATAATAATATTTTAGTTTTAGGGCTCATTACTCATATACTCTGATATGATATCTTGGAAAATGCTACAAATTTCGTTGCCAATGTTAGGAGTATTTGCTTGACTATCATATGATATGATATGAGAATGTTGTCAACAATGTATCTGCCTACCAAAACTAGTGGCACCATTTTTTTTACAGTTTGTGGACGGTAGATTTTAGACCTATAATAGCATGATTATCTTGCCTCGGATTTTTTATATCGCTCTACTTCCTTTGTATGAATAATAGGACAACTACCTAACACTTTGTTTATTTAGTTGTGGAAGTTACTTATAAGGTATTAAATCTATTATTATCATGAGATAATTGTCTTGCCATCCAACATATTTTATCCATATCTTCTATCCATATCTATTCTAACAACTTAAGCTCACCACTAGCAGATATTGTCCCTTTTAGGCTTTCTCTTTTGGTTTTCTCTAGGATTGTGGGATCTCACATTGGTGGGAGAGGGGAACAAAACATTCTTTATAAAAGTGTAGAAAACTCTCCCTAGCAGCGTTTTAAAAATCTTGAGGGAAAGCATGGAAAAGAAAACCCAAAAAGAACAATATCTGCTAACGATGAGCTTAAGCTATTACAAATGGGATCAAAACCACACTGAATGGTGTGCCAGCGAGGACACTGAGCCTGGAAAGGGGATGGACATAGGACGGTGTACTAGCGAGGACACTAGGCTCCGAGGGAGGTCGATTGTGAGATCCTACATCTATTGGAGAGAGGAACGAAACATCCTTTATAATGGTGTGGAAACCTCTCCCTAGTCGGCGTATTTTAAAAATTTTGAGGGGGAAAGCATAAGAAAAACAATATCGGTGGTCTTTACATCCATTTGCTTGGATTTGAGGTCATAATGCCTAGTAGTGCTATGATTATCCTATAATGACTTTATGAAGGCATGCTTTGTTTCTTTTCTTTTGACTTTATTAATTCAATGCTCTCAATTACAACGATCACTTACATTCCAAGAAGTTTCTTTTTATAGGTAACTCAACGACAAGATCAAGTTCATTGAGGTCATTTCACCTAATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGCTGATAAGATCACAAGACTAA

mRNA sequence

ATGGAGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCCCTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCTTCCGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTCAATGTTTATGCAGGCTGTTGTCTCGGTTGCCTGCATTCTTAGAGAGGCCTCAACATAAAATCTCTTTTTCTGTTGGCGGTAACTCAACGACAAGATCAAGTTCATTGAGGTCATTTCACCTAATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGCTGATAAGATCACAAGACTAA

Coding sequence (CDS)

ATGGAGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCCCTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCTTCCGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTCAATGTTTATGCAGGCTGTTGTCTCGGTTGCCTGCATTCTTAGAGAGGCCTCAACATAAAATCTCTTTTTCTGTTGGCGGTAACTCAACGACAAGATCAAGTTCATTGAGGTCATTTCACCTAATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGCTGATAAGATCACAAGACTAA

Protein sequence

MERFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRLPAFLERPQHKISFSVGGNSTTRSSSLRSFHLIRLSTLEFCLEWWKLIRSQD

Homology

[Close]

BLAST of Carg07236 vs. NCBI nr
Match: XP_023548911.1 (uncharacterized protein LOC111807420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53
Identity = 110/137 (80.29%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 1   MERFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPP 60
           M RFKIL+FAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPP
Sbjct: 1   MGRFKILLFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPP 60

Query: 61  SLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRLP 120
           S+SLSDNHESH                       PMEENCCKWVQQLDSQCLCRLLSRLP
Sbjct: 61  SVSLSDNHESHXXXXXXXXXXXXXXXXXXXXXXXPMEENCCKWVQQLDSQCLCRLLSRLP 120

Query: 121 AFLERPQHKISFSVGGN 138
           AFLERPQHKISFSVGG+
Sbjct: 121 AFLERPQHKISFSVGGS 137

[Close]

BLAST of Carg07236 vs. NCBI nr
Match: KGN44871.1 (hypothetical protein Csa_7G392440 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 8.5e-30
Identity = 72/137 (52.55%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 1   MERFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPP 60
           M RFKILI +V LFL LI D+E+QWQPP VAPRP C SQI LAN ACA LPY+ +     
Sbjct: 1   MGRFKILILSVVLFLTLITDSESQWQPPGVAPRPLCASQITLANYACATLPYAKLPXXXX 60

Query: 61  SLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRLP 120
                         P H             I L+P+EENCCKWVQQ+DS+C+C LLSRLP
Sbjct: 61  XXXXXXXXXXXXXSPVHXXXXXXXXXXXXXIPLTPIEENCCKWVQQVDSECVCELLSRLP 120

Query: 121 AFLERPQHKISFSVGGN 138
           AFL+RP H  S ++GG+
Sbjct: 121 AFLKRPIHNFSVTIGGS 137

[Close]

BLAST of Carg07236 vs. NCBI nr
Match: XP_019452675.1 (PREDICTED: uncharacterized protein LOC109354539 [Lupinus angustifolius] >OIW06753.1 hypothetical protein TanjilG_11478 [Lupinus angustifolius])

HSP 1 Score: 90.1 bits (222), Expect = 7.7e-15
Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 1   MERFKILIFAVTL---FLALIPDTEAQWQP-----PKVAPRPPCPSQIALANLACAMLPY 60
           M++ KI  F +TL   FL L+P  E+Q +P     P   PRP C SQ AL N ACAML +
Sbjct: 1   MKKVKIFNF-ITLGVTFLVLVPKIESQIRPSIGSLPPAPPRPLCASQFALVNYACAMLSF 60

Query: 61  STMALSPPSLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCL 120
                +P S    D H SH     H                +P EENCC+WV+++DSQC+
Sbjct: 61  -----TPGSPDNIDGHNSH----QHXXXXXXXXXXXXXXXXTPEEENCCRWVREMDSQCV 120

Query: 121 CRLLSRLPAFLERPQHKISFSVG 136
           C +L R P FL RP H+ +  +G
Sbjct: 121 CEILVRFPPFLTRPVHQYTVLIG 133

[Close]

BLAST of Carg07236 vs. NCBI nr
Match: XP_006576887.1 (uncharacterized protein LOC102666530 [Glycine max] >KHN19876.1 hypothetical protein glysoja_033508 [Glycine soja])

HSP 1 Score: 89.4 bits (220), Expect = 1.3e-14
Identity = 51/137 (37.23%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 1   MERFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPP 60
           ME F ++  A+TLFLA++P  E+Q +P    PRP C SQ AL N AC+ LP+S     PP
Sbjct: 1   MEIFNLIALALTLFLAIVPKMESQIKPIPKTPRPLCASQFALVNYACSRLPFSPGV--PP 60

Query: 61  SLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRLP 120
                                            +P E+NCC+W +++D QC+C LL RLP
Sbjct: 61  --DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDEDNCCRWAKEVDHQCVCELLLRLP 120

Query: 121 AFLERPQHKISFSVGGN 138
            FL RP H+ +  VG +
Sbjct: 121 PFLIRPSHQYTLKVGAS 133

[Close]

BLAST of Carg07236 vs. NCBI nr
Match: KYP78948.1 (hypothetical protein KK1_048070 [Cajanus cajan])

HSP 1 Score: 83.6 bits (205), Expect = 7.2e-13
Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 1   MERFKI--LIFAVTLFLALIPDTEAQWQPPKV-----APRPPCPSQIALANLACAMLPYS 60
           M+R KI  LI     FLA +P  E+Q+ PP +     +  P C SQ+AL N ACAMLP  
Sbjct: 1   MKRVKIFNLITQSLTFLAFVPKMESQFMPPFIPLPSPSLHPLCLSQLALVNYACAMLP-- 60

Query: 61  TMALSPPSLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLC 120
            +  +PPSL L+ +        +  H         HQ S    E+ CC+W +++D QC+C
Sbjct: 61  -LKATPPSLPLTPSPXXXXXNADEGH-------RSHQTS---QEDECCRWAREIDIQCVC 120

Query: 121 RLLSRLPAFLERPQHKISFSVG 136
            +L  LP FL +P H+ S S+G
Sbjct: 121 EILVLLPPFLSKPLHQYSISIG 129

[Close]

BLAST of Carg07236 vs. TAIR10
Match: AT3G63095.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 8.0e-06
Identity = 17/38 (44.74%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 97  EENCCKWVQQLDSQCLCRLLSRLPAFLERPQHKISFSV 135
           ++ CCKW++Q+D++C+C LL RLP  L +P H  +  V
Sbjct: 197 QQECCKWLKQMDNECVCDLLVRLPPLLAKPIHNYTVFV 234

HSP 2 Score: 38.9 bits (89), Expect = 3.7e-03
Identity = 25/49 (51.02%), Postives = 27/49 (55.10%), Query Frame = 0


Query: 7  LIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTM 56
          L  AVTL LAL   T  Q       PRP C SQ ALAN AC+ LP  T+
Sbjct: 4  LFIAVTLALALSSFTRGQRVIQIPPPRPLCASQYALANYACSRLPMHTV 52

[Close]

BLAST of Carg07236 vs. TrEMBL
Match: tr|A0A0A0KAN7|A0A0A0KAN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392440 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.6e-30
Identity = 72/137 (52.55%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 1   MERFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPP 60
           M RFKILI +V LFL LI D+E+QWQPP VAPRP C SQI LAN ACA LPY+ +     
Sbjct: 1   MGRFKILILSVVLFLTLITDSESQWQPPGVAPRPLCASQITLANYACATLPYAKLPXXXX 60

Query: 61  SLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRLP 120
                         P H             I L+P+EENCCKWVQQ+DS+C+C LLSRLP
Sbjct: 61  XXXXXXXXXXXXXSPVHXXXXXXXXXXXXXIPLTPIEENCCKWVQQVDSECVCELLSRLP 120

Query: 121 AFLERPQHKISFSVGGN 138
           AFL+RP H  S ++GG+
Sbjct: 121 AFLKRPIHNFSVTIGGS 137

[Close]

BLAST of Carg07236 vs. TrEMBL
Match: tr|A0A1J7HWG4|A0A1J7HWG4_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11478 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.1e-15
Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 1   MERFKILIFAVTL---FLALIPDTEAQWQP-----PKVAPRPPCPSQIALANLACAMLPY 60
           M++ KI  F +TL   FL L+P  E+Q +P     P   PRP C SQ AL N ACAML +
Sbjct: 1   MKKVKIFNF-ITLGVTFLVLVPKIESQIRPSIGSLPPAPPRPLCASQFALVNYACAMLSF 60

Query: 61  STMALSPPSLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCL 120
                +P S    D H SH     H                +P EENCC+WV+++DSQC+
Sbjct: 61  -----TPGSPDNIDGHNSH----QHXXXXXXXXXXXXXXXXTPEEENCCRWVREMDSQCV 120

Query: 121 CRLLSRLPAFLERPQHKISFSVG 136
           C +L R P FL RP H+ +  +G
Sbjct: 121 CEILVRFPPFLTRPVHQYTVLIG 133

[Close]

BLAST of Carg07236 vs. TrEMBL
Match: tr|A0A0B2QE80|A0A0B2QE80_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_033508 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.7e-15
Identity = 51/137 (37.23%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 1   MERFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPP 60
           ME F ++  A+TLFLA++P  E+Q +P    PRP C SQ AL N AC+ LP+S     PP
Sbjct: 1   MEIFNLIALALTLFLAIVPKMESQIKPIPKTPRPLCASQFALVNYACSRLPFSPGV--PP 60

Query: 61  SLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRLP 120
                                            +P E+NCC+W +++D QC+C LL RLP
Sbjct: 61  --DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDEDNCCRWAKEVDHQCVCELLLRLP 120

Query: 121 AFLERPQHKISFSVGGN 138
            FL RP H+ +  VG +
Sbjct: 121 PFLIRPSHQYTLKVGAS 133

[Close]

BLAST of Carg07236 vs. TrEMBL
Match: tr|A0A151UI79|A0A151UI79_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_048070 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.8e-13
Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 1   MERFKI--LIFAVTLFLALIPDTEAQWQPPKV-----APRPPCPSQIALANLACAMLPYS 60
           M+R KI  LI     FLA +P  E+Q+ PP +     +  P C SQ+AL N ACAMLP  
Sbjct: 1   MKRVKIFNLITQSLTFLAFVPKMESQFMPPFIPLPSPSLHPLCLSQLALVNYACAMLP-- 60

Query: 61  TMALSPPSLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLC 120
            +  +PPSL L+ +        +  H         HQ S    E+ CC+W +++D QC+C
Sbjct: 61  -LKATPPSLPLTPSPXXXXXNADEGH-------RSHQTS---QEDECCRWAREIDIQCVC 120

Query: 121 RLLSRLPAFLERPQHKISFSVG 136
            +L  LP FL +P H+ S S+G
Sbjct: 121 EILVLLPPFLSKPLHQYSISIG 129

[Close]

BLAST of Carg07236 vs. TrEMBL
Match: tr|A0A0L9U838|A0A0L9U838_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g229800 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.3e-12
Identity = 51/136 (37.50%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 7   LIFAVTLFLALIPDTEAQWQPPKV----APRPPCPSQIALANLACAMLPY---STMALSP 66
           LI    L L L+  TE+Q +PP +    APRP C SQ AL N AC+ LP+   +  A SP
Sbjct: 7   LITVALLLLTLVTKTESQLKPPLIPVAKAPRPLCGSQFALVNYACSRLPFRHGAPPADSP 66

Query: 67  PSLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRL 126
           P                                 +P E+NCC+W +++DSQC+C LL RL
Sbjct: 67  P--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPEEDNCCRWAKEVDSQCVCELLLRL 126

Query: 127 PAFLERPQHKISFSVG 136
           P FL RP H+ + +VG
Sbjct: 127 PPFLVRPVHQYTLNVG 140

The following BLAST results are available for this feature:

BLAST of Carg07236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548911.1	3.2e-53	80.29	uncharacterized protein LOC111807420 [Cucurbita pepo subsp. pepo]	[more]
KGN44871.1	8.5e-30	52.55	hypothetical protein Csa_7G392440 [Cucumis sativus]	[more]
XP_019452675.1	7.7e-15	39.86	PREDICTED: uncharacterized protein LOC109354539 [Lupinus angustifolius] >OIW0675...	[more]
XP_006576887.1	1.3e-14	37.23	uncharacterized protein LOC102666530 [Glycine max] >KHN19876.1 hypothetical prot...	[more]
KYP78948.1	7.2e-13	38.03	hypothetical protein KK1_048070 [Cajanus cajan]	[more]

BLAST of Carg07236 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63095.1	8.0e-06	44.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Carg07236 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07236 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KAN7\|A0A0A0KAN7_CUCSA	5.6e-30	52.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392440 PE=4 SV=1	[more]
tr\|A0A1J7HWG4\|A0A1J7HWG4_LUPAN	5.1e-15	39.86	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11478 PE=4 S...	[more]
tr\|A0A0B2QE80\|A0A0B2QE80_GLYSO	8.7e-15	37.23	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_033508 PE=4 SV=1	[more]
tr\|A0A151UI79\|A0A151UI79_CAJCA	4.8e-13	38.03	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_048070 PE=4 SV=1	[more]
tr\|A0A0L9U838\|A0A0L9U838_PHAAN	5.3e-12	37.50	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g229800 PE...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07236-RA	Carg07236-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34377	FAMILY NOT NAMED	coord: 75..137

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07236	Cla014748	Watermelon (97103) v1	carwmB0106
Carg07236	Csa7G392440	Cucumber (Chinese Long) v2	carcuB0117
Carg07236	MELO3C015854	Melon (DHL92) v3.5.1	carmeB0113
Carg07236	CSPI07G16880	Wild cucumber (PI 183967)	carcpiB0122
Carg07236	CmaCh19G000510	Cucurbita maxima (Rimu)	carcmaB0144
Carg07236	CmaCh17G011640	Cucurbita maxima (Rimu)	carcmaB0142
Carg07236	CmoCh19G000500	Cucurbita moschata (Rifu)	carcmoB0154
Carg07236	CmoCh17G011390	Cucurbita moschata (Rifu)	carcmoB0152
Carg07236	Lsi02G023060	Bottle gourd (USVL1VR-Ls)	carlsiB098
Carg07236	Cp4.1LG15g00520	Cucurbita pepo (Zucchini)	carcpeB0160
Carg07236	Cp4.1LG12g11820	Cucurbita pepo (Zucchini)	carcpeB0158
Carg07236	CsGy7G015340	Cucumber (Gy14) v2	carcgybB0118
Carg07236	MELO3C015854.2	Melon (DHL92) v3.6.1	carmedB0115
Carg07236	CsaV3_7G028640	Cucumber (Chinese Long) v3	carcucB0126
Carg07236	Cla97C09G169500	Watermelon (97103) v2	carwmbB0117

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07236	Carg16851	Silver-seed gourd	carcarB131

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07236	Silver-seed gourd	carcarB135
Carg07236	Watermelon (Charleston Gray)	carwcgB0113
Carg07236	Cucumber (Gy14) v2	carcgybB0120
Carg07236	Cucurbita maxima (Rimu)	carcmaB0148
Carg07236	Cucurbita moschata (Rifu)	carcmoB0157
Carg07236	Cucurbita pepo (Zucchini)	carcpeB0161
Carg07236	Bottle gourd (USVL1VR-Ls)	carlsiB100
Carg07236	Watermelon (Charleston Gray)	carwcgB0108
Carg07236	Watermelon (97103) v1	carwmB0109
Carg07236	Watermelon (97103) v2	carwmbB0116
Carg07236	Wax gourd	carwgoB0130
Carg07236	Wax gourd	carwgoB0131