Carg07236-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCCCTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCTTCCGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTCAATGTTTATGCAGGCTGTTGTCTCGGTTGCCTGCATTCTTAGAGAGGCCTCAACATAAAATCTCTTTTTCTGTTGGCGGTTCATGCAATGCTACATTCTCATGCGGAGGAGGAACCATAATTTAAGAAAAAAATTTCGGGTTATGCTCGAGTCATAGTGTGATTCAGTCCCTCATCTTTCTCAGTGTTGGATTTTCATGTCTGTGCTGTGTTGATGTTATATGATTCACTAGTTCTGTTGTTAAGAAATACAAATGTCACTTAAAACAGTTTCTAAATGGTGTTCGTATAGGTTCCAAAGTTAGGGGGTTATTAGGTTCAAATACAACTAAAAATGCACCAAAGATGTCAAGGACATAATAATATTTTAGTTTTAGGGCTCATTACTCATATACTCTGATATGATATCTTGGAAAATGCTACAAATTTCGTTGCCAATGTTAGGAGTATTTGCTTGACTATCATATGATATGATATGAGAATGTTGTCAACAATGTATCTGCCTACCAAAACTAGTGGCACCATTTTTTTTACAGTTTGTGGACGGTAGATTTTAGACCTATAATAGCATGATTATCTTGCCTCGGATTTTTTATATCGCTCTACTTCCTTTGTATGAATAATAGGACAACTACCTAACACTTTGTTTATTTAGTTGTGGAAGTTACTTATAAGGTATTAAATCTATTATTATCATGAGATAATTGTCTTGCCATCCAACATATTTTATCCATATCTTCTATCCATATCTATTCTAACAACTTAAGCTCACCACTAGCAGATATTGTCCCTTTTAGGCTTTCTCTTTTGGTTTTCTCTAGGATTGTGGGATCTCACATTGGTGGGAGAGGGGAACAAAACATTCTTTATAAAAGTGTAGAAAACTCTCCCTAGCAGCGTTTTAAAAATCTTGAGGGAAAGCATGGAAAAGAAAACCCAAAAAGAACAATATCTGCTAACGATGAGCTTAAGCTATTACAAATGGGATCAAAACCACACTGAATGGTGTGCCAGCGAGGACACTGAGCCTGGAAAGGGGATGGACATAGGACGGTGTACTAGCGAGGACACTAGGCTCCGAGGGAGGTCGATTGTGAGATCCTACATCTATTGGAGAGAGGAACGAAACATCCTTTATAATGGTGTGGAAACCTCTCCCTAGTCGGCGTATTTTAAAAATTTTGAGGGGGAAAGCATAAGAAAAACAATATCGGTGGTCTTTACATCCATTTGCTTGGATTTGAGGTCATAATGCCTAGTAGTGCTATGATTATCCTATAATGACTTTATGAAGGCATGCTTTGTTTCTTTTCTTTTGACTTTATTAATTCAATGCTCTCAATTACAACGATCACTTACATTCCAAGAAGTTTCTTTTTATAGGTAACTCAACGACAAGATCAAGTTCATTGAGGTCATTTCACCTAATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGCTGATAAGATCACAAGACTAA ATGGAGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCCCTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCTTCCGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTCAATGTTTATGCAGGCTGTTGTCTCGGTTGCCTGCATTCTTAGAGAGGCCTCAACATAAAATCTCTTTTTCTGTTGGCGGTAACTCAACGACAAGATCAAGTTCATTGAGGTCATTTCACCTAATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGCTGATAAGATCACAAGACTAA ATGGAGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCCCTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCTTCCGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTCAATGTTTATGCAGGCTGTTGTCTCGGTTGCCTGCATTCTTAGAGAGGCCTCAACATAAAATCTCTTTTTCTGTTGGCGGTAACTCAACGACAAGATCAAGTTCATTGAGGTCATTTCACCTAATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGCTGATAAGATCACAAGACTAA MERFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGLPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSQCLCRLLSRLPAFLERPQHKISFSVGGNSTTRSSSLRSFHLIRLSTLEFCLEWWKLIRSQD
BLAST of Carg07236-RA vs. NCBI nr
Match: XP_023548911.1 (uncharacterized protein LOC111807420 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53 Identity = 110/137 (80.29%), Postives = 113/137 (82.48%), Query Frame = 0
BLAST of Carg07236-RA vs. NCBI nr
Match: KGN44871.1 (hypothetical protein Csa_7G392440 [Cucumis sativus]) HSP 1 Score: 139.8 bits (351), Expect = 8.5e-30 Identity = 72/137 (52.55%), Postives = 86/137 (62.77%), Query Frame = 0
BLAST of Carg07236-RA vs. NCBI nr
Match: XP_019452675.1 (PREDICTED: uncharacterized protein LOC109354539 [Lupinus angustifolius] >OIW06753.1 hypothetical protein TanjilG_11478 [Lupinus angustifolius]) HSP 1 Score: 90.1 bits (222), Expect = 7.7e-15 Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of Carg07236-RA vs. NCBI nr
Match: XP_006576887.1 (uncharacterized protein LOC102666530 [Glycine max] >KHN19876.1 hypothetical protein glysoja_033508 [Glycine soja]) HSP 1 Score: 89.4 bits (220), Expect = 1.3e-14 Identity = 51/137 (37.23%), Postives = 70/137 (51.09%), Query Frame = 0
BLAST of Carg07236-RA vs. NCBI nr
Match: KYP78948.1 (hypothetical protein KK1_048070 [Cajanus cajan]) HSP 1 Score: 83.6 bits (205), Expect = 7.2e-13 Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 0
BLAST of Carg07236-RA vs. TAIR10
Match: AT3G63095.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 47.8 bits (112), Expect = 8.0e-06 Identity = 17/38 (44.74%), Postives = 27/38 (71.05%), Query Frame = 0
HSP 2 Score: 38.9 bits (89), Expect = 3.7e-03 Identity = 25/49 (51.02%), Postives = 27/49 (55.10%), Query Frame = 0
BLAST of Carg07236-RA vs. TrEMBL
Match: tr|A0A0A0KAN7|A0A0A0KAN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392440 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.6e-30 Identity = 72/137 (52.55%), Postives = 86/137 (62.77%), Query Frame = 0
BLAST of Carg07236-RA vs. TrEMBL
Match: tr|A0A1J7HWG4|A0A1J7HWG4_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11478 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.1e-15 Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 0
BLAST of Carg07236-RA vs. TrEMBL
Match: tr|A0A0B2QE80|A0A0B2QE80_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_033508 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 8.7e-15 Identity = 51/137 (37.23%), Postives = 70/137 (51.09%), Query Frame = 0
BLAST of Carg07236-RA vs. TrEMBL
Match: tr|A0A151UI79|A0A151UI79_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_048070 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.8e-13 Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 0
BLAST of Carg07236-RA vs. TrEMBL
Match: tr|A0A0L9U838|A0A0L9U838_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g229800 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.3e-12 Identity = 51/136 (37.50%), Postives = 68/136 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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