Cp4.1LG15g00520 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g00520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAAA ATPase containing von Willebrand factor type A
LocationCp4.1LG15 : 300299 .. 300772 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTCTGATGATACCCGAGATAGAGGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTCCTTCGCCCCATAGGCATGGGCATGACCACGACCACGACCACGACCACGACCACGACCACGGGCACGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCCTTAGCTCATTTGGCTAACTTCATGGTGCGACCCTCGCATGTGTTTACCGTGGCCATAACAGAAGACTGTGTTGTCACTTACTCGTGCATTGGACGAATTAAGATTTGA

mRNA sequence

ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTCTGATGATACCCGAGATAGAGGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTCCTTCGCCCCATAGGCATGGGCATGACCACGACCACGACCACGACCACGACCACGACCACGGGCACGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCCTTAGCTCATTTGGCTAACTTCATGGTGCGACCCTCGCATGTGTTTACCGTGGCCATAACAGAAGACTGTGTTGTCACTTACTCGTGCATTGGACGAATTAAGATTTGA

Coding sequence (CDS)

ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTCTGATGATACCCGAGATAGAGGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTCCTTCGCCCCATAGGCATGGGCATGACCACGACCACGACCACGACCACGACCACGACCACGGGCACGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCCTTAGCTCATTTGGCTAACTTCATGGTGCGACCCTCGCATGTGTTTACCGTGGCCATAACAGAAGACTGTGTTGTCACTTACTCGTGCATTGGACGAATTAAGATTTGA

Protein sequence

MGRLEFAYTLAALLFVLALMIPEIEAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPPSPHRHGHDHDHDHDHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: M5W0Q1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021373mg PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31
Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 1

Query: 19  LMIPEIEAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPPSP------------ 78
           L +P++EAQ    PP+PLC+SQFALA+YACA LP  P PLP  P P P            
Sbjct: 3   LFVPKMEAQRLFPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDDDGGQEQ 62

Query: 79  -HRHGHDHDHDHDHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAH 138
            H H H H H H H H H HGH+R  H GHH  S SP E+ CCRW  Q+D+ECVC+ L H
Sbjct: 63  EHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECVCELLVH 122

Query: 139 LANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 158
           L  F+++P+H +TVA+ E C VTY+C   I+I
Sbjct: 123 LPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 154

BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A5C5N5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032977 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-27
Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 1

Query: 13  LLFVLALMIPEIEAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPPSPHRHGHD 72
           +L +L ++  +++ Q     P+PLC SQFAL ++ACA LP NP P P+  PPSP   G  
Sbjct: 11  ILTILLVLTLKVDCQLMPPSPRPLCISQFALVNHACAMLPFNPNPAPV--PPSPDEPGQS 70

Query: 73  HDHDHDHDHDHGHGHHRGHHHGH-------HHRSRSPIEEECCRWARQVDSECVCDALAH 132
           H H   H H HGHG   GH H H       H   +S  EE CCRW +++D ECVCD LAH
Sbjct: 71  HAHSPGHGHGHGHGEGHGHGHSHSXRHGIRHRHQQSSAEEACCRWLKEIDDECVCDLLAH 130

Query: 133 LANFMVRPSHVFTVAITEDCVVTYSCIGRIK 157
           L  F+ RPSH +TV++   C VT+SC GR++
Sbjct: 131 LPLFLTRPSHYYTVSVDPSCSVTFSCGGRLR 159

BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A0A072UD15_MEDTR (Lipid transfer protein-like protein OS=Medicago truncatula GN=MTR_7g094650 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26
Identity = 80/172 (46.51%), Postives = 104/172 (60.47%), Query Frame = 1

Query: 1   MGRLEFAYTLAALLFVLALMIPEIEAQAWSYPP---KPLCSSQFALASYACARLPLNP-- 60
           M ++E    +A  L +LA+ +P+IE++     P   +PLC+SQFAL +YAC RLP  P  
Sbjct: 1   MKKIEIFKIMAMALTLLAI-VPKIESEGRPTTPTNQRPLCASQFALVNYACGRLPFTPGV 60

Query: 61  EPLPISPPPSPHRHGHDHDHDHD-----------HDHDHGHGHHRGHHHGHHHRSRSPIE 120
            P P+ PPP+P   G D D   D           H  DHGHGH  GH HGH HR     E
Sbjct: 61  PPAPLEPPPAPDDDGGDDDDGGDDDGGNDEGHKNHHRDHGHGHGHGHKHGHKHRRHQTAE 120

Query: 121 EE-CCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRI 156
           +E CCRWAR+VD++CVC+ L  L  F+VRP H++T+ I EDC +TYSC G I
Sbjct: 121 QENCCRWAREVDNQCVCELLVRLPPFLVRPLHLYTLNIGEDCEITYSCGGPI 171

BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A0A078J9Y3_BRANA (BnaCnng43330D protein OS=Brassica napus GN=BnaCnng43330D PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.6e-25
Identity = 75/188 (39.89%), Postives = 97/188 (51.60%), Query Frame = 1

Query: 32  PPKPLCSSQFALASYACARLPLN--PEPLPISPPPSP------HRHGHDHDHDHDHDHD- 91
           PP+PLC+SQ+ALA+YAC+RLP+N  P P PI+PPP P      H H HDHD DHDHDHD 
Sbjct: 423 PPRPLCASQYALANYACSRLPMNTVPLPSPIAPPPPPIFPPPDHDHDHDHDDDHDHDHDG 482

Query: 92  -------------------HGHGHH----------------------------------R 151
                              H H HH                                  R
Sbjct: 483 DDHDHDHDGDDHDHHDDDDHHHNHHDHDHDHNNHGHDHDDDDHDHHHHNDNSHRRHHRRR 542

Query: 152 GHHHGHHHRSRSPI--EEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVV 156
            HHH HHHR R     ++ECC+W +Q+D+ECVCD L  L   + +P+H +TV + E C+V
Sbjct: 543 HHHHHHHHRHREETYAQQECCKWVKQMDNECVCDLLVRLPPLLAKPAHNYTVFVDESCIV 602

BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A0A0D3DV88_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24
Identity = 75/193 (38.86%), Postives = 97/193 (50.26%), Query Frame = 1

Query: 32  PPKPLCSSQFALASYACARLPLN--PEPLPISPPPSP------HRHGHDHDHDHDHDHDH 91
           PP+PLC+SQ+ALA+YAC+RLP+N  P P PI+PPP P      H H HDHDHD DHDHDH
Sbjct: 423 PPRPLCASQYALANYACSRLPMNTVPLPSPIAPPPPPIFPPPDHDHDHDHDHDDDHDHDH 482

Query: 92  G-----------------HGHH-------------------------------------- 151
                             H HH                                      
Sbjct: 483 DGDDHDHHDHDHDDDDHHHNHHDHDHDHNRDHDHDHNNHGHDHDDDDHDHHHHNDNSHRR 542

Query: 152 ----RGHHHGHHHRSRSPI--EEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAIT 156
               R HHH HHHR R     ++ECC+W +Q+D+ECVCD L  L   + +P+H +TV + 
Sbjct: 543 HHRRRHHHHHHHHRHREETYAQQECCKWVKQMDNECVCDLLVRLPPLLAKPAHNYTVFVD 602

BLAST of Cp4.1LG15g00520 vs. TAIR10
Match: AT3G63095.1 (AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.3e-22
Identity = 71/221 (32.13%), Postives = 92/221 (41.63%), Query Frame = 1

Query: 32  PPKPLCSSQFALASYACARLPLN---------PEPLPISPPPSPHRH------------- 91
           PP+PLC+SQ+ALA+YAC+RLP++         P P PI+PPP  H H             
Sbjct: 28  PPRPLCASQYALANYACSRLPMHTVPPPAPITPPPAPIAPPPPEHDHHDHDHDHDHDHDH 87

Query: 92  --------GHDHDHDHDHDHDHGHGH---------------------------------- 151
                    HDHD DHDHDHD  H H                                  
Sbjct: 88  DDDHDDDDDHDHDDDHDHDHDDDHDHDDDDRDRDRDRDRDRDRDRDHDRAHDDHDHNHDH 147

Query: 152 -------------------------------HRGHHHGHHHRSRSP--IEEECCRWARQV 156
                                          H  HHH HHHR R     ++ECC+W +Q+
Sbjct: 148 DNDHNDNNHDHNHDADHHNNDDNSHDQHRRRHHRHHHRHHHRHREETFAQQECCKWLKQM 207

BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|595790845|ref|XP_007199171.1| (hypothetical protein PRUPE_ppa021373mg, partial [Prunus persica])

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31
Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 1

Query: 19  LMIPEIEAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPPSP------------ 78
           L +P++EAQ    PP+PLC+SQFALA+YACA LP  P PLP  P P P            
Sbjct: 3   LFVPKMEAQRLFPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDDDGGQEQ 62

Query: 79  -HRHGHDHDHDHDHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAH 138
            H H H H H H H H H HGH+R  H GHH  S SP E+ CCRW  Q+D+ECVC+ L H
Sbjct: 63  EHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECVCELLVH 122

Query: 139 LANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 158
           L  F+++P+H +TVA+ E C VTY+C   I+I
Sbjct: 123 LPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 154

BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|1009147758|ref|XP_015891580.1| (PREDICTED: uncharacterized protein DDB_G0272724 [Ziziphus jujuba])

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-28
Identity = 74/141 (52.48%), Postives = 93/141 (65.96%), Query Frame = 1

Query: 17  LALMIPEIEAQAWS-YPPKPLCSSQFALASYACARLPLNP-EPLPISPPPSPHRHGHDHD 76
           L L++P++E+Q      P+PLC+SQFALASYAC+ +P  P  P P SPP  P   GH H 
Sbjct: 6   LLLLVPKLESQVLPPVAPRPLCASQFALASYACSLIPFTPLPPEPPSPPSPPDFLGHSHG 65

Query: 77  HDHDHDHDHGHGHHRGHHHGHHHRSR-SPIEEECCRWARQVDSECVCDALAHLANFMVRP 136
           H H H H H      GH HGH HR R SP EE CCRW +Q+DS+CVCD L HL NF+ RP
Sbjct: 66  HGHGHRHGH------GHRHGHRHRHRESPAEESCCRWLKQLDSQCVCDVLVHLPNFLSRP 125

Query: 137 SHVFTVAITEDCVVTYSCIGR 155
           +H ++V + + C VT+SC GR
Sbjct: 126 AHEYSVIVGDACDVTFSCEGR 140

BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|645259234|ref|XP_008235264.1| (PREDICTED: protein catecholamines up [Prunus mume])

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28
Identity = 74/147 (50.34%), Postives = 91/147 (61.90%), Query Frame = 1

Query: 24  IEAQAWSYPPKPLCSSQFALASYACARLPLNPEP--LPISPPPSP-----------HRHG 83
           +EAQ    PP+PLC+SQFALA+YACA LP  P P   P SPPPS            H H 
Sbjct: 1   MEAQRIFPPPRPLCASQFALANYACALLPFTPTPPLTPPSPPPSSPPDDDGGQEQEHEHE 60

Query: 84  HDHDHDHDHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFM 143
           H H H H H H H HGH+R  H GHH    SP E+ CCRW  Q+D+ECVC+ L HL  F+
Sbjct: 61  HGHGHGHGHGHGHRHGHNRHRHGGHHEPEPSPAEDNCCRWLTQLDNECVCELLVHLPTFL 120

Query: 144 VRPSHVFTVAITEDCVVTYSCIGRIKI 158
           ++P+H +TV + E C VTY+C   I+I
Sbjct: 121 LKPTHAYTVTVGESCRVTYTCGTPIRI 147

BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|694332213|ref|XP_009356752.1| (PREDICTED: transcription cofactor vestigial-like protein 3 [Pyrus x bretschneideri])

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28
Identity = 77/157 (49.04%), Postives = 101/157 (64.33%), Query Frame = 1

Query: 7   AYTLAALLFVLALMIPEIEAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISP---P 66
           A++LA+LL     ++P++EAQ    P +P C+SQFALA+YAC+ LP  P P P  P   P
Sbjct: 52  AHSLASLL-----ILPKMEAQLLFPPVRPFCASQFALANYACSILPFAPMPPPTPPSPPP 111

Query: 67  PSPHRHGHDHDHDHDHDHDHGHGH---HRGHHHGHHHRSRSPIEEECCRWARQVDSECVC 126
           PSP+  G +  HDH H H HGH H   H  H H HH     P E+ CCRW  Q+D++CVC
Sbjct: 112 PSPNDDGQEEQHDHGHGHGHGHDHGHRHVHHRHRHHVHESIPAEDNCCRWLTQLDNQCVC 171

Query: 127 DALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 158
           + L HL NF+VRP+HV++V I E C VTY+C   I+I
Sbjct: 172 ELLVHLPNFLVRPAHVYSVVIGETCTVTYTCGTPIRI 203

BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|731395332|ref|XP_010652136.1| (PREDICTED: zinc transporter 7-B [Vitis vinifera])

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 70/149 (46.98%), Postives = 92/149 (61.74%), Query Frame = 1

Query: 13  LLFVLALMIPEIEAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPP----SPHR 72
           +L +L ++  +++ Q     P+PLC SQFAL ++ACA LP NP P P+ P P      H 
Sbjct: 11  ILTILLVLTLKVDCQLMPPSPRPLCISQFALVNHACAMLPFNPNPAPVPPSPDEPGQSHA 70

Query: 73  HGHDHDHDHDHDHDHGHGHHRGHHHGHHHR-SRSPIEEECCRWARQVDSECVCDALAHLA 132
           H   H H H H   HGHGH   H HG  HR  +S  EE CCRW +++D ECVCD LAHL 
Sbjct: 71  HSPGHGHGHGHGEGHGHGHSHSHRHGIRHRHQQSSAEEACCRWLKEIDDECVCDLLAHLP 130

Query: 133 NFMVRPSHVFTVAITEDCVVTYSCIGRIK 157
            F+ RPSH +TV++   C VT+SC GR++
Sbjct: 131 LFLTRPSHYYTVSVDPSCSVTFSCGGRLR 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
M5W0Q1_PRUPE1.1e-3150.66Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021373mg PE=4 S... [more]
A5C5N5_VITVI3.8e-2746.36Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032977 PE=4 SV=1[more]
A0A072UD15_MEDTR1.1e-2646.51Lipid transfer protein-like protein OS=Medicago truncatula GN=MTR_7g094650 PE=4 ... [more]
A0A078J9Y3_BRANA4.6e-2539.89BnaCnng43330D protein OS=Brassica napus GN=BnaCnng43330D PE=4 SV=1[more]
A0A0D3DV88_BRAOL1.4e-2438.86Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G63095.13.3e-2232.13 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|595790845|ref|XP_007199171.1|1.6e-3150.66hypothetical protein PRUPE_ppa021373mg, partial [Prunus persica][more]
gi|1009147758|ref|XP_015891580.1|2.2e-2852.48PREDICTED: uncharacterized protein DDB_G0272724 [Ziziphus jujuba][more]
gi|645259234|ref|XP_008235264.1|2.9e-2850.34PREDICTED: protein catecholamines up [Prunus mume][more]
gi|694332213|ref|XP_009356752.1|2.9e-2849.04PREDICTED: transcription cofactor vestigial-like protein 3 [Pyrus x bretschneide... [more]
gi|731395332|ref|XP_010652136.1|1.4e-2746.98PREDICTED: zinc transporter 7-B [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR013771Bifunctional trypsin/alpha-amylase inhibitor helical domain
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g00520.1Cp4.1LG15g00520.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013771Bifunctional trypsin/alpha-amylase inhibitor helical domainGENE3DG3DSA:1.10.120.10coord: 90..130
score: 9.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 37..151
score: 0.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 95..135
score: 3.2
NoneNo IPR availablePANTHERPTHR34377FAMILY NOT NAMEDcoord: 1..157
score: 4.9

The following gene(s) are paralogous to this gene:

None