Cp4.1LG15g00520 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTCTGATGATACCCGAGATAGAGGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTCCTTCGCCCCATAGGCATGGGCATGACCACGACCACGACCACGACCACGACCACGACCACGGGCACGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCCTTAGCTCATTTGGCTAACTTCATGGTGCGACCCTCGCATGTGTTTACCGTGGCCATAACAGAAGACTGTGTTGTCACTTACTCGTGCATTGGACGAATTAAGATTTGA ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTCTGATGATACCCGAGATAGAGGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTCCTTCGCCCCATAGGCATGGGCATGACCACGACCACGACCACGACCACGACCACGACCACGGGCACGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCCTTAGCTCATTTGGCTAACTTCATGGTGCGACCCTCGCATGTGTTTACCGTGGCCATAACAGAAGACTGTGTTGTCACTTACTCGTGCATTGGACGAATTAAGATTTGA ATGGGGCGGCTCGAATTCGCATACACATTAGCAGCATTATTGTTCGTTTTAGCTCTGATGATACCCGAGATAGAGGCGCAAGCATGGTCATACCCTCCAAAACCCCTTTGTTCTTCACAGTTTGCGCTCGCAAGCTACGCTTGTGCGAGGCTGCCTCTCAACCCAGAGCCCCTCCCAATTTCTCCGCCTCCTTCGCCCCATAGGCATGGGCATGACCACGACCACGACCACGACCACGACCACGACCACGGGCACGGACATCACCGTGGGCATCACCATGGGCACCACCACCGCAGCCGCTCGCCCATCGAAGAGGAATGTTGCCGATGGGCAAGGCAAGTGGATAGCGAATGCGTGTGCGATGCCTTAGCTCATTTGGCTAACTTCATGGTGCGACCCTCGCATGTGTTTACCGTGGCCATAACAGAAGACTGTGTTGTCACTTACTCGTGCATTGGACGAATTAAGATTTGA MGRLEFAYTLAALLFVLALMIPEIEAQAWSYPPKPLCSSQFALASYACARLPLNPEPLPISPPPSPHRHGHDHDHDHDHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSECVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI
BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: M5W0Q1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021373mg PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31 Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A5C5N5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032977 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.8e-27 Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A0A072UD15_MEDTR (Lipid transfer protein-like protein OS=Medicago truncatula GN=MTR_7g094650 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26 Identity = 80/172 (46.51%), Postives = 104/172 (60.47%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A0A078J9Y3_BRANA (BnaCnng43330D protein OS=Brassica napus GN=BnaCnng43330D PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 4.6e-25 Identity = 75/188 (39.89%), Postives = 97/188 (51.60%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. TrEMBL
Match: A0A0D3DV88_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24 Identity = 75/193 (38.86%), Postives = 97/193 (50.26%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. TAIR10
Match: AT3G63095.1 (AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 102.1 bits (253), Expect = 3.3e-22 Identity = 71/221 (32.13%), Postives = 92/221 (41.63%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|595790845|ref|XP_007199171.1| (hypothetical protein PRUPE_ppa021373mg, partial [Prunus persica]) HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31 Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|1009147758|ref|XP_015891580.1| (PREDICTED: uncharacterized protein DDB_G0272724 [Ziziphus jujuba]) HSP 1 Score: 134.0 bits (336), Expect = 2.2e-28 Identity = 74/141 (52.48%), Postives = 93/141 (65.96%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|645259234|ref|XP_008235264.1| (PREDICTED: protein catecholamines up [Prunus mume]) HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28 Identity = 74/147 (50.34%), Postives = 91/147 (61.90%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|694332213|ref|XP_009356752.1| (PREDICTED: transcription cofactor vestigial-like protein 3 [Pyrus x bretschneideri]) HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28 Identity = 77/157 (49.04%), Postives = 101/157 (64.33%), Query Frame = 1
BLAST of Cp4.1LG15g00520 vs. NCBI nr
Match: gi|731395332|ref|XP_010652136.1| (PREDICTED: zinc transporter 7-B [Vitis vinifera]) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27 Identity = 70/149 (46.98%), Postives = 92/149 (61.74%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |