CSPI07G06980 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06980
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRING-H2 finger protein
LocationChr7 : 5092176 .. 5095072 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACAATTATAAAAATAGAGATCCAACAATTCAATTTCTAAAAAAAAAGAGAGAGAGAGAGAGAGAGAATTACAATTAAACTAAACTAAGGTTCCAACCTAATTTAACCCATAAATTCCCCCAATACTCAATACAACCAAATGGACATCACATCTTACCTCTAAGCTCACAAATTATTACAAACCAAATCAATAAAAGACAAAAGCTATAAAGATAAGAACTAATTCATCCATTGAGTTCTTCATTTCCAATCCAATCCACGTCCACTTTTTATTTCAAGTAACTAAGCAAATCTCCTCTCCATTACCTTCAACTTCCATCCACATTTCTTCGAAATTTCGACTCCATTTCTTCCCAGTTTCAAACCCTTTTCATTTTTCCTTCATTCGCCTTCGTTTTGAGTGAAAACAATCCTAGAACCGGCTGAGTTTGTGCATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTGTAAGAAGGATTAAACAAATTTTGCCAGATTCTGGGTTTATGTTATTTGACAATTTTTTTTTACTTGGATGAAGTATATATTAACCGGTTGAGAATAGTTGGATTTGGAAGAACTGTTTGTAACTTGTTTTGATTGGGAAATTTTTAAGCGTTTCCGACATAAAATTTCTTCTAAACTGTAGAACCTGTTGGGAATATGTTGAAAATATCATATTTGCCCTAATTTATCAGCTTAGGTTGTTGGTATGGTTTTACTTGGTTCATGCCCTAAGAATAATTGCACTTAACTATGGATTGATCCAACAAACGACTCTATTGATAACCGTTTAATTTTTTGGTTTTGAAAATTAAGCTTGTTGCTTCCAAGTTCCAAGTATGGATTTCTTTATTTTGTTTATGTTTTCAATATCCGGGCTTAAAGGAATAATTTTTAGAAGCTTGTTTTGTTTTTAAAATTAGGCAAGATGAAAACTATTGGAAAGAAATCGTTTGAAAACAGGGACAGTTTTTCAGAAACCAAATGGTTATTAAATTGATCTCTAGCTGCCAAGCTATTGATTTGATTATTGTTATTCTTCAGTGATAATTCTGTTTTCCATTGCCGTGAAATAATTAGAACCAGAACAAGTCAACTTGGTACTGAGAGTGACGATGGATATAACTTTTCAAGTTTTATTAGCTTCTAAATGCTACTTTGCTATTAAACTATGATTTAATTGGTATGTGTTCATGGAAACATAATTTGGTTACAATTAAGAATGCTTTTCTTTATTATTATTGTTCTTTTTTTATCTGGGTTGTCATCTCTGTCTGAATTTTAACTTCAATTAGTTTGGAGGCATTAACACTATGTTTTCGTTGTAGCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTAGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGGTCAGTTCCTATTGTCATGTCCTTGTTTTTCACATTACTATTCAGAAAACATTTCTGACTTCAACTAGAATGTTCCTTGCTATTTGTCTAGATTTAACGGCATGTTTGGAAGCGATCTTAAAATTGTTAGAAACACTTTTCTTATGTTTATAATCACTCTAAAACATGTCTTTAGTCATTCAAAGTTTAAAAATCAATTTGATTATTTGATTTCACACGTTTAAACTTGATTTTTATATAATCAAAGTTGATTTTGAATACTTAAAAGAATGCCCGTAAGCATATGCTGTGGTATGTGAATCTACTTGTATGATTTTCTTTTGTCGATAGGGATTTGGTTTGTATTGTGTACTCATGAAATAGGATCCAATTCCAACAAACTCGTAAAGTTTCTACAAACTCTTGTCTAAGACTTTTAAAGATAAATTGTTACTGGGTTGCCATCTGAATGTTGAAAACTAGAATAGATCCCAGCTCTGTCGTGTATTGCTAACCAAATAAGTTTATTCATCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGAAGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAGCATATCGCCATCAACTAATATTTTTCTAACACGTTTCGCAACTTGGGATTTCCTGTATGTGTAGAAAACTCAGAGACAATCCATTGTTCCAAGTTGTGGTATTAATCTTTTATAGTTCTATAGTTGATGATGTTCGTACTTGTATCCTTCTAAGATCCTGTATTGACTCCAAATTGTGTGGCAATTTTAATAGCCAAAGAGGATGCTTACGTGATTTCTCTTCTTTTTAATCGTTTCATGTAATTTATATTTGATTTCTTATCATTTTGGTTCTTACGAGAGCGTTTAGGGTACAAACTATTCTAAGATTATAATTACCACTTGC

mRNA sequence

ATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTAGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGAAGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAGCATATCGCCATCAACTAA

Coding sequence (CDS)

ATGACGAGCGCTTCGGAGCTGTTTTATTGTCGGAGGTATAGATTTGGTCGCACTGACTCTGACTTGGGCCTTGATTCTGAGCCTCCCGATCGGCATCTTCAGTATCAACGTCGTCATCATGGTCACAATGGCAATCACCGCCGCGACTTGAACTCCTGTGGCGATTTCCGGCGTTCCTCGTTGCAAGAACGTCGTCAATCTCCTCGGTTTTTTAACCCTCTTTCCGTTGATCGATCGCCTGCACAGTCTGACTCAGCTACGAGCGTTGCTTCTAGAAATAATATCAATGGAAATACTCAGAATAGCTTGAGGTCTGGGTTAAGTAGGGATTCCAGATTGCCAGGATCTGTTTTACTTGCTAGAGAAAGGCTTCTCGAGAGATTGAGGGGTGCCTCGTCACCGACGACCAGAAACGCTCTTGTTGAAGCATCAAATGGAAATCCAGAAACCACGACAAGTCGATCACAGAGGATATCCCTCGTCGATGCTGACAGGATGCGGTTAGTAGCTGTACCTAGCAAGAGGCCCCCTGGTCTTTCACAGGATGCAATCAACCGCTTACAACTTGAGGTTTTTATCAATACAGATCATATCATCAACGAAGGCGTGATGACAATAACATCAACAGACTGTAGTATATGTCTAGAGAGTTTCACAGATGGAGACAAGCTCATCCATTTACCTTGTGAGCACAAATTTCACCATCCTTGCCTGGACCGATGGATTAGAACTTGTGGAGAATGTCCATATTGTCGACAGCATATCGCCATCAACTAA
Homology
[Close]
BLAST of CSPI07G06980 vs. Swiss-Prot
Match: RHY1A_ARATH (Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana GN=RHY1A PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-35
Identity = 99/258 (38.37%), Postives = 138/258 (53.49%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHG-HNGNHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     H  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VASRNNINGNTQNSLRSGLSRDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+   RLPG+VL
Sbjct: 61  TPRLRRF---FHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LAR+RL ERLRG S  +   +   + +   E++        +     +++    +K+P G
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQG 180

Query: 181 LSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           L+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H FH  CL
Sbjct: 181 LTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCL 240

Query: 241 DRWIRTCGECPYCRQHIA 257
           + W+R CG+CP CR+ IA
Sbjct: 241 NPWLRACGDCPCCRRAIA 248

[Close]
BLAST of CSPI07G06980 vs. Swiss-Prot
Match: ZNRF3_DANRE (E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 23/56 (41.07%), Postives = 39/56 (69.64%), Query Frame = 1 

Query: 200 NEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           ++ V + +++DC+ICLE + DG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 256 SDSVSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311

[Close]
BLAST of CSPI07G06980 vs. Swiss-Prot
Match: RF12B_XENLA (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09
Identity = 26/83 (31.33%), Postives = 45/83 (54.22%), Query Frame = 1 

Query: 175 RPPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFH 234
           +P GL+++ I+ L    +   D +            CS+C+  +T+G+KL  LPC H++H
Sbjct: 677 QPRGLTKEQIDNLSTRNYGENDAL----------KTCSVCITEYTEGNKLRKLPCSHEYH 736

Query: 235 HPCLDRWIRTCGECPYCRQHIAI 258
             C+DRW+     CP CR+ + +
Sbjct: 737 IHCIDRWLSENSTCPICRRAVLV 749

[Close]
BLAST of CSPI07G06980 vs. Swiss-Prot
Match: ZNRF3_MOUSE (E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-09
Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 1 

Query: 207 TSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           +++DC+ICLE + DG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 286 STSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 334

[Close]
BLAST of CSPI07G06980 vs. Swiss-Prot
Match: ZNRF3_HUMAN (E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-09
Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 1 

Query: 207 TSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           +++DC+ICLE + DG++L  +PC H+FH  C+D W+     CP+CR +I
Sbjct: 289 STSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337

[Close]
BLAST of CSPI07G06980 vs. TrEMBL
Match: A0A0A0K6D2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071510 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 2.4e-143
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTDHIIN+GVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIAIN 259
           WIRTCGECPYCRQHIAIN
Sbjct: 241 WIRTCGECPYCRQHIAIN 258

[Close]
BLAST of CSPI07G06980 vs. TrEMBL
Match: V4SB77_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028999mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.1e-46
Identity = 133/285 (46.67%), Postives = 166/285 (58.25%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RR R GR D DLGLDS   +R L + RRHH HN NHR DL+ C   RRS 
Sbjct: 1   MTSASELFYTRRSRVGRADQDLGLDSFTSERGL-HNRRHH-HNHNHRHDLDGCDPLRRS- 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSV-ASRNNINGNTQNSLRS-GLSRDSRLPGSVL 120
               R  P    P   +R+    D  TS   S N +N     S  S   + + RLPG+VL
Sbjct: 61  -PHARHLPH--RPSPSERASVWLDQGTSQHVSSNPMNSEVSRSTSSPSWNGNERLPGTVL 120

Query: 121 LARERLLERLRGAS-SPTTRNA------------------LVEASNGNPETTTSRSQRIS 180
           LAR RLLERLRG S S   R+                   LV+A +   ET+   S   S
Sbjct: 121 LARARLLERLRGVSLSENGRSGRGLSSNNQRGNIFGDELRLVDAGDWAAETSAGWSAVSS 180

Query: 181 ----LVDADRMRLVAVPSKR--PPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSI 240
               L+ +   RL  V  KR  PPGL+Q+A++ L +E+F N+  I +EG  + TS DCSI
Sbjct: 181 PFSELMTSQTERLQLVQQKRKKPPGLTQEALDCLHVEIF-NSFAISSEGEASKTSLDCSI 240

Query: 241 CLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN 259
           CLESFTDGD+LI LPC+H+FH  CLD W+R+CG+CPYCR++I +N
Sbjct: 241 CLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVN 278

[Close]
BLAST of CSPI07G06980 vs. TrEMBL
Match: A0A067EVC3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023376mg PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.0e-46
Identity = 133/285 (46.67%), Postives = 166/285 (58.25%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RR R GR D DLGLDS   +R L + RRHH HN NHR DL+ C   RRS 
Sbjct: 1   MTSASELFYTRRSRVGRADQDLGLDSFTSERGL-HNRRHH-HNHNHRHDLDGCDPLRRSP 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSV-ASRNNINGNTQNSLRS-GLSRDSRLPGSVL 120
              R  S R   P   +R+    D  TS   S N +N        S   + + RLPG+VL
Sbjct: 61  -HARHLSHR---PSPSERASVWLDQGTSQHVSSNPMNSEVSRGTSSPSWNGNERLPGTVL 120

Query: 121 LARERLLERLRGAS-SPTTRNA------------------LVEASNGNPETTTSRSQRIS 180
           LAR RLLERLRG S S   R+                   LV+A +   ET+   S   S
Sbjct: 121 LARARLLERLRGVSLSENGRSGRGLSSNNQRGNIFGDELRLVDAGDWAAETSAGWSAVSS 180

Query: 181 ----LVDADRMRLVAVPSKR--PPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSI 240
               L+ +   RL  V  KR  PPGL+Q+A++ L +E+F N+  I +EG  + TS DCSI
Sbjct: 181 PFSELMTSQTERLQLVQQKRKKPPGLTQEALDCLHVEIF-NSFAISSEGEASKTSLDCSI 240

Query: 241 CLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN 259
           CLESFTDGD+LI LPC+H+FH  CLD W+R+CG+CPYCR++I +N
Sbjct: 241 CLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVN 278

[Close]
BLAST of CSPI07G06980 vs. TrEMBL
Match: B9SNB5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0174590 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-42
Identity = 125/289 (43.25%), Postives = 164/289 (56.75%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRH-HGHNGNH-RRDLNSCGDFRR 60
           MTSASELFY RR R GR D +L  D    + H  Y RRH H H   H R DL+ C   RR
Sbjct: 1   MTSASELFYQRRSRVGRADLELESDR---NFHFNYTRRHPHHHTHTHSRHDLDGCDPSRR 60

Query: 61  SSLQERRQSPRFFNPLSV--DRSPAQSDSATS-VASRNNINGNTQNSL-RSGLSRDSRLP 120
           SS       P F + LS   DR+  + D ATS +A  N+IN  T +S  R  ++ + RLP
Sbjct: 61  SS-------PHFRHRLSSHSDRASVRLDQATSQLAPGNSINTETLSSTSRPRMTGNDRLP 120

Query: 121 GSVLLARERLLERLRGASSPTTRNA-------------------LVEASNGNPETTTSRS 180
           G+VLLAR RLLERLRG S    R +                   +V+  +   +    RS
Sbjct: 121 GAVLLARARLLERLRGVSLSGNRRSSRASFGIYDREFTFGDDLRIVDTGDWRTDIAPGRS 180

Query: 181 QR-----ISLVDADRMRLVAVP-SKRPPGLSQDAINRLQLEVFINTDHIINEGVMTITST 240
            R      S+   +R++L      K+PPGL+ + +  LQLE+F + +  + EG+++  S 
Sbjct: 181 SRGTSFTESIYTTERLQLAEESYKKKPPGLTPEDLECLQLEIFSSWEKGV-EGIVSQASW 240

Query: 241 DCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN 259
           DCSICLESF DGDKLI LPC H+FH  CLD W+RTCG+CPYCR+ IA++
Sbjct: 241 DCSICLESFKDGDKLICLPCNHRFHSSCLDPWVRTCGDCPYCRRDIAVS 278

[Close]
BLAST of CSPI07G06980 vs. TrEMBL
Match: A0A061E823_THECC (RING/U-box superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_007187 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.0e-42
Identity = 120/262 (45.80%), Postives = 157/262 (59.92%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RR R GR DSD  + S   DR+  Y RRHH  + NHR D++ C   RRS 
Sbjct: 1   MTSASELFYTRRSRVGRPDSDPMIGSSI-DRN--YNRRHHLGHHNHRHDVDGCDHLRRSP 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATS-VASRNNINGNT-QNSLRSGLSRDSRLPGSVL 120
               RQ     +  S +RS  + D  TS     N +N +   +S R  L+ + RLPG+VL
Sbjct: 61  --HVRQFSSRASSQSQERSYMRFDQGTSPFVLSNALNADAVSSSSRPSLTSNERLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRIS-----LVDADRMRLVAVPS 180
           LAR RLLERLRG S  T R  LV+A +   E +T  S   S         +R +L+   +
Sbjct: 121 LARARLLERLRGVSVSTNR--LVDAGDWGSEISTGLSSGSSPFTDLTSQTERFQLLEETN 180

Query: 181 KRPPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKF 240
           K+PPGL+Q+A++ L LEVF + +  +++  ++  S DCSICLESF D D L  LPC H+F
Sbjct: 181 KKPPGLTQEALDGLPLEVFSSGEVDVDKK-LSRDSRDCSICLESFGDDDVLTRLPCGHRF 240

Query: 241 HHPCLDRWIRTCGECPYCRQHI 256
           H  CLD W+RTCG+CPYCR+ I
Sbjct: 241 HLACLDPWVRTCGDCPYCRRSI 254

[Close]
BLAST of CSPI07G06980 vs. TAIR10
Match: AT1G49850.1 (AT1G49850.1 RING/U-box superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36
Identity = 99/258 (38.37%), Postives = 138/258 (53.49%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHG-HNGNHRRDLNSCGDFRRS 60
           MTSASELF  RR R GR+D  L  D+     H  +  R HG H+ N R D + C   RR 
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYRHHSHHHHRRHGVHHHNQRHDSDGCDPLRRP 60

Query: 61  SLQERRQSPRFFNPLSVDRSPAQSDSATS-VASRNNINGNTQNSLRSGLSRDSRLPGSVL 120
           + + RR    F +P+     P +    TS   + ++ +  TQ+S    L+   RLPG+VL
Sbjct: 61  TPRLRRF---FHHPIQERSRPIRDVQGTSQYLNTDSTDTETQSSSFVNLNGSERLPGAVL 120

Query: 121 LARERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPG 180
           LAR+RL ERLRG S  +   +   + +   E++        +     +++    +K+P G
Sbjct: 121 LARDRLFERLRGVSLSSNSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQG 180

Query: 181 LSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCL 240
           L+QDAIN L  + F + +       +     DCSICLESFT GD LI LPC H FH  CL
Sbjct: 181 LTQDAINCLHRQTFSSAE-------VKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCL 240

Query: 241 DRWIRTCGECPYCRQHIA 257
           + W+R CG+CP CR+ IA
Sbjct: 241 NPWLRACGDCPCCRRAIA 248

[Close]
BLAST of CSPI07G06980 vs. TAIR10
Match: AT2G15580.1 (AT2G15580.1 RING/U-box superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 4.3e-11
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 1 

Query: 210 DCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHI 256
           DC+ICL+ F  G+ L+HLPC HKFH  CL  W+ T   CPYCR  I
Sbjct: 149 DCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194

[Close]
BLAST of CSPI07G06980 vs. TAIR10
Match: AT1G68070.1 (AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 24/61 (39.34%), Postives = 38/61 (62.30%), Query Frame = 1 

Query: 195 TDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQH 254
           ++++ NE V+     DC ICL S+ DG +L+ LPC H FH  C+ +W++    CP C+ +
Sbjct: 276 SENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFN 335

Query: 255 I 256
           I
Sbjct: 336 I 336

[Close]
BLAST of CSPI07G06980 vs. TAIR10
Match: AT5G66070.2 (AT5G66070.2 RING/U-box superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 178 GLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLP-CEHKFHHP 237
           GL+ D++NR+      +T   I           CS+CL+ F  G+ +  LP C H FH P
Sbjct: 176 GLTGDSLNRIPKVRITDTSPEI---------VSCSVCLQDFQVGETVRSLPHCHHMFHLP 235

Query: 238 CLDRWIRTCGECPYCRQHI 256
           C+D+W+R    CP CR+H+
Sbjct: 236 CIDKWLRRHASCPLCRRHL 245

[Close]
BLAST of CSPI07G06980 vs. TAIR10
Match: AT5G20910.1 (AT5G20910.1 RING/U-box superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10
Identity = 36/121 (29.75%), Postives = 60/121 (49.59%), Query Frame = 1 

Query: 142 EASNGNPETTTSRSQRI--SLVDADRMRLVAV-----PSKRPPGLSQDAINRLQLEVFIN 201
           E+SNG  E T   +  +   L++   M +  +     P + PP  S++ + +L + +F  
Sbjct: 160 ESSNGPTENTIGETANLMQELINGLDMIIPDILDDGGPPRAPPA-SKEVVEKLPVIIF-- 219

Query: 202 TDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQH 256
           T+ ++ +        +C IC E+   GDK+  LPC+H FH PCL  W+     CP CR  
Sbjct: 220 TEELLKKFG---AEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHE 274

[Close]
BLAST of CSPI07G06980 vs. NCBI nr
Match: gi|449438341|ref|XP_004136947.1| (PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis sativus])

HSP 1 Score: 516.2 bits (1328), Expect = 3.4e-143
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTDHIIN+GVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR
Sbjct: 181 QDAINRLQLEVFINTDHIINDGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240

Query: 241 WIRTCGECPYCRQHIAIN 259
           WIRTCGECPYCRQHIAIN
Sbjct: 241 WIRTCGECPYCRQHIAIN 258

[Close]
BLAST of CSPI07G06980 vs. NCBI nr
Match: gi|659110057|ref|XP_008455026.1| (PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo])

HSP 1 Score: 487.6 bits (1254), Expect = 1.3e-134
Identity = 242/256 (94.53%), Postives = 249/256 (97.27%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFYCRRYRFGRTDSDLGLDSEPPDR+LQYQRRHHGHN NHRRDLNSCGDFRRSS
Sbjct: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRNLQYQRRHHGHNANHRRDLNSCGDFRRSS 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVASRNNINGNTQNSLRSGLSRDSRLPGSVLLA 120
           LQERRQSPRFFNPLSVDRSPAQSDSATSV SRNNINGNTQNSLRSGLS DSRLPGSVLLA
Sbjct: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSVGSRNNINGNTQNSLRSGLSGDSRLPGSVLLA 120

Query: 121 RERLLERLRGASSPTTRNALVEASNGNPETTTSRSQRISLVDADRMRLVAVPSKRPPGLS 180
           RERLLERLRGASSPT+RNALVEASNGNPE +TSRSQRISL+DADRMRLVAVPSKRPPGLS
Sbjct: 121 RERLLERLRGASSPTSRNALVEASNGNPEISTSRSQRISLIDADRMRLVAVPSKRPPGLS 180

Query: 181 QDAINRLQLEVFINTDHIINEGVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHPCLDR 240
           QDAINRLQLEVFINTD II++ VMTITSTDCSICLESFTDGDKLIHLPCEHKFHH CLDR
Sbjct: 181 QDAINRLQLEVFINTDRIIDDDVMTITSTDCSICLESFTDGDKLIHLPCEHKFHHACLDR 240

Query: 241 WIRTCGECPYCRQHIA 257
           WIRTCGECPYCRQHI+
Sbjct: 241 WIRTCGECPYCRQHIS 256

[Close]
BLAST of CSPI07G06980 vs. NCBI nr
Match: gi|568867241|ref|XP_006486949.1| (PREDICTED: E3 ubiquitin-protein ligase RLIM [Citrus sinensis])

HSP 1 Score: 194.9 bits (494), Expect = 1.7e-46
Identity = 135/285 (47.37%), Postives = 167/285 (58.60%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RR R GR D DLGLDS   +R L + RRHH HN NHR DL+ C   RRS 
Sbjct: 1   MTSASELFYTRRSRVGRADQDLGLDSFTSERGL-HNRRHH-HNHNHRHDLDGCDPLRRSP 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSV-ASRNNINGNTQNSLRS-GLSRDSRLPGSVL 120
              R  S R   P   +R+    D  TS   S N +N        S   + + RLPG+VL
Sbjct: 61  -HARHLSHR---PSPSERASVWLDQGTSQHVSSNPMNSEVSRGTSSPSWNGNERLPGTVL 120

Query: 121 LARERLLERLRGAS-SPTTRNA------------------LVEASNGNPETTTSRSQRIS 180
           LAR RLLERLRG S S   R+                   LV+A +   ET+T  S   S
Sbjct: 121 LARARLLERLRGVSLSENGRSGRGLSNNNQRGNIFGDELRLVDAGDWAAETSTGWSAVSS 180

Query: 181 ----LVDADRMRLVAVPSKR--PPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSI 240
               L+ +   RL  V  KR  PPGL+Q+A++ L +EVF N+  I +EG  + TS DCSI
Sbjct: 181 PFSELMTSQTERLQLVQQKRKKPPGLTQEALDCLHVEVF-NSFAISSEGEASKTSLDCSI 240

Query: 241 CLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN 259
           CLESFTDGD+LI LPC+H+FH  CLD W+R+CG+CPYCR++I +N
Sbjct: 241 CLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVN 278

[Close]
BLAST of CSPI07G06980 vs. NCBI nr
Match: gi|567860412|ref|XP_006422860.1| (hypothetical protein CICLE_v10028999mg [Citrus clementina])

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46
Identity = 133/285 (46.67%), Postives = 166/285 (58.25%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RR R GR D DLGLDS   +R L + RRHH HN NHR DL+ C   RRS 
Sbjct: 1   MTSASELFYTRRSRVGRADQDLGLDSFTSERGL-HNRRHH-HNHNHRHDLDGCDPLRRS- 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSV-ASRNNINGNTQNSLRS-GLSRDSRLPGSVL 120
               R  P    P   +R+    D  TS   S N +N     S  S   + + RLPG+VL
Sbjct: 61  -PHARHLPH--RPSPSERASVWLDQGTSQHVSSNPMNSEVSRSTSSPSWNGNERLPGTVL 120

Query: 121 LARERLLERLRGAS-SPTTRNA------------------LVEASNGNPETTTSRSQRIS 180
           LAR RLLERLRG S S   R+                   LV+A +   ET+   S   S
Sbjct: 121 LARARLLERLRGVSLSENGRSGRGLSSNNQRGNIFGDELRLVDAGDWAAETSAGWSAVSS 180

Query: 181 ----LVDADRMRLVAVPSKR--PPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSI 240
               L+ +   RL  V  KR  PPGL+Q+A++ L +E+F N+  I +EG  + TS DCSI
Sbjct: 181 PFSELMTSQTERLQLVQQKRKKPPGLTQEALDCLHVEIF-NSFAISSEGEASKTSLDCSI 240

Query: 241 CLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN 259
           CLESFTDGD+LI LPC+H+FH  CLD W+R+CG+CPYCR++I +N
Sbjct: 241 CLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVN 278

[Close]
BLAST of CSPI07G06980 vs. NCBI nr
Match: gi|641838909|gb|KDO57845.1| (hypothetical protein CISIN_1g023376mg [Citrus sinensis])

HSP 1 Score: 192.6 bits (488), Expect = 8.7e-46
Identity = 133/285 (46.67%), Postives = 166/285 (58.25%), Query Frame = 1 

Query: 1   MTSASELFYCRRYRFGRTDSDLGLDSEPPDRHLQYQRRHHGHNGNHRRDLNSCGDFRRSS 60
           MTSASELFY RR R GR D DLGLDS   +R L + RRHH HN NHR DL+ C   RRS 
Sbjct: 1   MTSASELFYTRRSRVGRADQDLGLDSFTSERGL-HNRRHH-HNHNHRHDLDGCDPLRRSP 60

Query: 61  LQERRQSPRFFNPLSVDRSPAQSDSATSV-ASRNNINGNTQNSLRS-GLSRDSRLPGSVL 120
              R  S R   P   +R+    D  TS   S N +N        S   + + RLPG+VL
Sbjct: 61  -HARHLSHR---PSPSERASVWLDQGTSQHVSSNPMNSEVSRGTSSPSWNGNERLPGTVL 120

Query: 121 LARERLLERLRGAS-SPTTRNA------------------LVEASNGNPETTTSRSQRIS 180
           LAR RLLERLRG S S   R+                   LV+A +   ET+   S   S
Sbjct: 121 LARARLLERLRGVSLSENGRSGRGLSSNNQRGNIFGDELRLVDAGDWAAETSAGWSAVSS 180

Query: 181 ----LVDADRMRLVAVPSKR--PPGLSQDAINRLQLEVFINTDHIINEGVMTITSTDCSI 240
               L+ +   RL  V  KR  PPGL+Q+A++ L +E+F N+  I +EG  + TS DCSI
Sbjct: 181 PFSELMTSQTERLQLVQQKRKKPPGLTQEALDCLHVEIF-NSFAISSEGEASKTSLDCSI 240

Query: 241 CLESFTDGDKLIHLPCEHKFHHPCLDRWIRTCGECPYCRQHIAIN 259
           CLESFTDGD+LI LPC+H+FH  CLD W+R+CG+CPYCR++I +N
Sbjct: 241 CLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVN 278

The following BLAST results are available for this feature:
BLAST of CSPI07G06980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RHY1A_ARATH2.4e-3538.37Probable E3 ubiquitin-protein ligase RHY1A OS=Arabidopsis thaliana GN=RHY1A PE=2... [more]
ZNRF3_DANRE1.0e-0941.07E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=1 SV=2[more]
RF12B_XENLA1.7e-0931.33E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b PE=2 SV=1[more]
ZNRF3_MOUSE2.9e-0944.90E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=1 SV=1[more]
ZNRF3_HUMAN2.9e-0944.90E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1 SV=3[more]
BLAST of CSPI07G06980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6D2_CUCSA2.4e-14399.22Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071510 PE=4 SV=1[more]
V4SB77_9ROSI2.1e-4646.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028999mg PE=4 SV=1[more]
A0A067EVC3_CITSI6.0e-4646.67Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023376mg PE=4 SV=1[more]
B9SNB5_RICCO1.8e-4243.25Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0174590 PE=4 SV=1[more]
A0A061E823_THECC9.0e-4245.80RING/U-box superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_007... [more]
BLAST of CSPI07G06980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49850.11.3e-3638.37 RING/U-box superfamily protein[more]
AT2G15580.14.3e-1156.52 RING/U-box superfamily protein[more]
AT1G68070.11.3e-1039.34 Zinc finger, C3HC4 type (RING finger) family protein[more]
AT5G66070.21.6e-1036.71 RING/U-box superfamily protein[more]
AT5G20910.14.8e-1029.75 RING/U-box superfamily protein[more]
BLAST of CSPI07G06980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438341|ref|XP_004136947.1|3.4e-14399.22PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis sativus][more]
gi|659110057|ref|XP_008455026.1|1.3e-13494.53PREDICTED: E3 ubiquitin-protein ligase RLIM [Cucumis melo][more]
gi|568867241|ref|XP_006486949.1|1.7e-4647.37PREDICTED: E3 ubiquitin-protein ligase RLIM [Citrus sinensis][more]
gi|567860412|ref|XP_006422860.1|3.0e-4646.67hypothetical protein CICLE_v10028999mg [Citrus clementina][more]
gi|641838909|gb|KDO57845.1|8.7e-4646.67hypothetical protein CISIN_1g023376mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06980.1CSPI07G06980.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 210..252
score: 1.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 211..251
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 211..252
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 209..255
score: 5.4
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 35..49
score: 2.5E-39coord: 174..258
score: 2.5
NoneNo IPR availablePANTHERPTHR14155:SF182SUBFAMILY NOT NAMEDcoord: 35..49
score: 2.5E-39coord: 174..258
score: 2.5
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 210..256
score: 3.12

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G06980Cla016082Watermelon (97103) v1cpiwmB623
CSPI07G06980Csa7G071510Cucumber (Chinese Long) v2cpicuB354
CSPI07G06980MELO3C018508Melon (DHL92) v3.5.1cpimeB538
CSPI07G06980ClCG02G006670Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06980Lsi03G005640Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06980MELO3C018508.2Melon (DHL92) v3.6.1cpimedB523
CSPI07G06980CsaV3_7G007960Cucumber (Chinese Long) v3cpicucB415
CSPI07G06980Cla97C02G033660Watermelon (97103) v2cpiwmbB554
CSPI07G06980Bhi05G000887Wax gourdcpiwgoB684
CSPI07G06980Cucsa.219270Cucumber (Gy14) v1cgycpiB336
CSPI07G06980CmaCh11G017080Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06980CmoCh11G014100Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06980Cp4.1LG04g07640Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06980CsGy7G006520Cucumber (Gy14) v2cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06980Cucumber (Gy14) v2cgybcpiB088
CSPI07G06980Cucumber (Gy14) v2cgybcpiB199
CSPI07G06980Silver-seed gourdcarcpiB0214
CSPI07G06980Silver-seed gourdcarcpiB0217
CSPI07G06980Silver-seed gourdcarcpiB0329
CSPI07G06980Silver-seed gourdcarcpiB0413
CSPI07G06980Silver-seed gourdcarcpiB0493
CSPI07G06980Silver-seed gourdcarcpiB0810
CSPI07G06980Cucumber (Chinese Long) v3cpicucB386
CSPI07G06980Cucumber (Chinese Long) v3cpicucB404
CSPI07G06980Cucumber (Chinese Long) v3cpicucB405
CSPI07G06980Watermelon (97103) v2cpiwmbB542
CSPI07G06980Watermelon (97103) v2cpiwmbB567
CSPI07G06980Watermelon (97103) v2cpiwmbB568
CSPI07G06980Watermelon (97103) v2cpiwmbB580
CSPI07G06980Wax gourdcpiwgoB659
CSPI07G06980Wax gourdcpiwgoB672
CSPI07G06980Wax gourdcpiwgoB689
CSPI07G06980Wax gourdcpiwgoB711
CSPI07G06980Wild cucumber (PI 183967)cpicpiB091
CSPI07G06980Wild cucumber (PI 183967)cpicpiB169
CSPI07G06980Wild cucumber (PI 183967)cpicpiB170
CSPI07G06980Cucumber (Gy14) v1cgycpiB525
CSPI07G06980Cucumber (Gy14) v1cgycpiB582
CSPI07G06980Cucurbita maxima (Rimu)cmacpiB351
CSPI07G06980Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06980Cucurbita maxima (Rimu)cmacpiB786
CSPI07G06980Cucurbita moschata (Rifu)cmocpiB344
CSPI07G06980Cucurbita moschata (Rifu)cmocpiB491
CSPI07G06980Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06980Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06980Cucumber (Chinese Long) v2cpicuB333
CSPI07G06980Cucumber (Chinese Long) v2cpicuB347
CSPI07G06980Melon (DHL92) v3.5.1cpimeB557
CSPI07G06980Melon (DHL92) v3.5.1cpimeB569
CSPI07G06980Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06980Watermelon (Charleston Gray)cpiwcgB587
CSPI07G06980Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06980Watermelon (97103) v1cpiwmB594
CSPI07G06980Watermelon (97103) v1cpiwmB596
CSPI07G06980Watermelon (97103) v1cpiwmB609
CSPI07G06980Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06980Cucurbita pepo (Zucchini)cpecpiB470
CSPI07G06980Cucurbita pepo (Zucchini)cpecpiB804
CSPI07G06980Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06980Bottle gourd (USVL1VR-Ls)cpilsiB537
CSPI07G06980Bottle gourd (USVL1VR-Ls)cpilsiB550
CSPI07G06980Melon (DHL92) v3.6.1cpimedB558
CSPI07G06980Melon (DHL92) v3.6.1cpimedB542
CSPI07G06980Melon (DHL92) v3.6.1cpimedB554