CSPI07G03040 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G03040
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 2476670 .. 2477345 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCCAAGTCCTTCATCTTGCTCGGTCTTCTTTTTGCCGTCGTCCTCTTTTCCTCGGAGGCGATAACGGTTACAGGAAGGGATGCGAAATTGAGTGAGTTTCATTTTTTAAACCTGCAATGCGATGTATACTCGCTACTTTTAACTCCTTCAATTAGTGTTATGTACTATACCACAGCTTGGGCTTATGACAAATAATTTTTTTATTTAGTTGAGGTTTATGACAAACAAACCGCCAATGAAATTTTTAATTACAGCTTAAAATCAATGTAGGTTTTTGAATTAGTTGATGGACAATAAACATCAACAGAAACTATTTGTATTTGACGTTGATTTTTGCCGTTAACAAAATTATTTTTGTTGATGTCAAAAGTTTTGTTGACACTGCTTCATTGATAATATTTTTAGTTATCAATAAAGGTCAAATTTGTGGTAGTATATATTGATTATATCAATGATTTACTTTGCAGAAGAAGCTACGATGGAAACTGGTGAAGTTGACAATGTCGAGCGCCACAGTTATGGAGGAGCTCATTCTCGGAACCTTGCCGAATGCCTCCACGGTTGCAACCGAGGTTGTTGCGAATGCTTTCGCGGCCGTTGCATCAGGTGCTGCAGCTTTGCTGGTGAGGCTGGTATTGTTGATGGAAAGCCTCAAGCTAAGCCTAACAAT

mRNA sequence

ATGAGTTCCAAGTCCTTCATCTTGCTCGGTCTTCTTTTTGCCGTCGTCCTCTTTTCCTCGGAGGCGATAACGGTTACAGGAAGGGATGCGAAATTGAAAGAAGCTACGATGGAAACTGGTGAAGTTGACAATGTCGAGCGCCACAGTTATGGAGGAGCTCATTCTCGGAACCTTGCCGAATGCCTCCACGGTTGCAACCGAGGTTGTTGCGAATGCTTTCGCGGCCGTTGCATCAGGTGCTGCAGCTTTGCTGGTGAGGCTGGTATTGTTGATGGAAAGCCTCAAGCTAAGCCTAACAAT

Coding sequence (CDS)

ATGAGTTCCAAGTCCTTCATCTTGCTCGGTCTTCTTTTTGCCGTCGTCCTCTTTTCCTCGGAGGCGATAACGGTTACAGGAAGGGATGCGAAATTGAAAGAAGCTACGATGGAAACTGGTGAAGTTGACAATGTCGAGCGCCACAGTTATGGAGGAGCTCATTCTCGGAACCTTGCCGAATGCCTCCACGGTTGCAACCGAGGTTGTTGCGAATGCTTTCGCGGCCGTTGCATCAGGTGCTGCAGCTTTGCTGGTGAGGCTGGTATTGTTGATGGAAAGCCTCAAGCTAAGCCTAACAAT
Homology
[Close]
BLAST of CSPI07G03040 vs. TrEMBL
Match: A0A0A0K5A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037560 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-49
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1 

Query: 1   MSSKSFILLGLLFAVVLFSSEAITVTGRDAKLKEATMETGEVDNVERHSYGGAHSRNLAE 60
           MSSKSFILLGLLFAVVLFSSEAITVT RDAKLKEATMETGEVDNVERHSYGGAHSRNLAE
Sbjct: 1   MSSKSFILLGLLFAVVLFSSEAITVTARDAKLKEATMETGEVDNVERHSYGGAHSRNLAE 60

Query: 61  CLHGCNRGCCECFRGRCIRCCSFAGEAGIVDGKPQAKPNN 101
           CLHGCNRGCCECFRGRCIRCCSFAGEAGIVDGKPQAKPNN
Sbjct: 61  CLHGCNRGCCECFRGRCIRCCSFAGEAGIVDGKPQAKPNN 100

[Close]
BLAST of CSPI07G03040 vs. NCBI nr
Match: gi|449453573|ref|XP_004144531.1| (PREDICTED: glycine-rich protein-like [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 4.2e-49
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1 

Query: 1   MSSKSFILLGLLFAVVLFSSEAITVTGRDAKLKEATMETGEVDNVERHSYGGAHSRNLAE 60
           MSSKSFILLGLLFAVVLFSSEAITVT RDAKLKEATMETGEVDNVERHSYGGAHSRNLAE
Sbjct: 1   MSSKSFILLGLLFAVVLFSSEAITVTARDAKLKEATMETGEVDNVERHSYGGAHSRNLAE 60

Query: 61  CLHGCNRGCCECFRGRCIRCCSFAGEAGIVDGKPQAKPNN 101
           CLHGCNRGCCECFRGRCIRCCSFAGEAGIVDGKPQAKPNN
Sbjct: 61  CLHGCNRGCCECFRGRCIRCCSFAGEAGIVDGKPQAKPNN 100

The following BLAST results are available for this feature:
BLAST of CSPI07G03040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G03040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5A1_CUCSA2.9e-4999.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037560 PE=4 SV=1[more]
BLAST of CSPI07G03040 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G03040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453573|ref|XP_004144531.1|4.2e-4999.00PREDICTED: glycine-rich protein-like [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G03040.1CSPI07G03040.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G03040Cla015652Watermelon (97103) v1cpiwmB624
CSPI07G03040Csa7G037560Cucumber (Chinese Long) v2cpicuB354
CSPI07G03040ClCG02G002470Watermelon (Charleston Gray)cpiwcgB574
CSPI07G03040Lsi11G013820Bottle gourd (USVL1VR-Ls)cpilsiB505
CSPI07G03040CsaV3_7G002900Cucumber (Chinese Long) v3cpicucB419
CSPI07G03040Cla97C02G028930Watermelon (97103) v2cpiwmbB553
CSPI07G03040Bhi05G001252Wax gourdcpiwgoB681
CSPI07G03040CsGy7G002720Cucumber (Gy14) v2cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G03040Cucumber (Chinese Long) v2cpicuB326
CSPI07G03040Cucumber (Chinese Long) v2cpicuB358
CSPI07G03040Melon (DHL92) v3.5.1cpimeB535
CSPI07G03040Melon (DHL92) v3.5.1cpimeB538
CSPI07G03040Watermelon (97103) v1cpiwmB621
CSPI07G03040Cucurbita pepo (Zucchini)cpecpiB257
CSPI07G03040Cucurbita pepo (Zucchini)cpecpiB301
CSPI07G03040Cucurbita pepo (Zucchini)cpecpiB692
CSPI07G03040Bottle gourd (USVL1VR-Ls)cpilsiB498
CSPI07G03040Bottle gourd (USVL1VR-Ls)cpilsiB514
CSPI07G03040Melon (DHL92) v3.6.1cpimedB521
CSPI07G03040Melon (DHL92) v3.6.1cpimedB523
CSPI07G03040Cucumber (Gy14) v2cgybcpiB087
CSPI07G03040Silver-seed gourdcarcpiB0235
CSPI07G03040Silver-seed gourdcarcpiB1103
CSPI07G03040Cucumber (Chinese Long) v3cpicucB385
CSPI07G03040Cucumber (Chinese Long) v3cpicucB415
CSPI07G03040Watermelon (97103) v2cpiwmbB552
CSPI07G03040Wax gourdcpiwgoB680
CSPI07G03040Wax gourdcpiwgoB691
CSPI07G03040Wild cucumber (PI 183967)cpicpiB090
CSPI07G03040Cucumber (Gy14) v1cgycpiB287
CSPI07G03040Cucurbita maxima (Rimu)cmacpiB151
CSPI07G03040Cucurbita maxima (Rimu)cmacpiB533
CSPI07G03040Cucurbita moschata (Rifu)cmocpiB131
CSPI07G03040Cucurbita moschata (Rifu)cmocpiB524