CSPI06G29630 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G29630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionElongator complex 4
LocationChr6 : 25671741 .. 25676030 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCATATCCTACATTTGGACTAGCTTCAATTTCTCCATTTTTTTGGTTGCAGAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTGATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGTGCTATACTTTTTATTAACTTATGCAACTATTCGATTTCGGATTTAGATGGAAAGATGTATGATCGGATTGGCTTTATTTCAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGGTAATCTTACTGACCTCAACCTAATAGTTTTTGGCTGGTGTTTGATCTCAATGAACAACAACCAATGAATTGTTTTAATTATGTGGTGAAACTGCTTGTCATATTATGATGAAGTCTTCTGGGAAAAAGTACAACTTTCTGTCAACTTTCATGTAGTATATGTACTTAGTTCATGTCCATTCGAGGATTGCAGTACAACTTTCATCCTGACCTGTTTCTCATGTTACAAAAACATCTTGAAATCTATTCATTTTTCCCAACCCCTTCAATAATGACTCACTCTCACTGCCACAACCTTAAATATAGTGCAATACTGTTCTTATTGGAGATAATTATGTAATTCTTGTACAGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGGTACGGTTGACCTCTGCTTTCCCTCCTAAATTACATATATTAAAGTCATTGCATTAGTAAGTTAGATTCAATTTCAATTCATTGTAAAATATTTGAAGCGGCCATTGGGATCTAGAGAACGTTTGATAAACCTGTGCTAGCTTCTCTTTGAGATGGAAATAGTTGGATTGGGATCTTGGGTTAGATTCTGTATCTCCTCGTTGGGATTTGGAGAACGTTTGATAAAGAAAAATAGGGTCTTCTTATCTAATATAGAGGTGATTGGGATTTGGAACATAATTGGGCATCAAATTACATCATGCAGTGTTTTCATGACATGTAGTTTTTGCTAAACGCAACCATCAGAGCTCATTTTCTAACTCCAAATACAAGAGCAATAACTTTAGGCCTATATGAAATGAACTATTCTGGATTTGATCTGTAATTTATCCCACCTTCAGATTTGGCATCCAAGAAAACCTTTTGTTAGAGAGTGGGCGTGGAATCTATTTGGGAGAAAACCTGAATTGTGGACTGAATTGATTATTGTTTATTATTATTTTCTGAAAGGAAACCAGTTTTTCATTGATGAAATGAAAAGATACTAATGTGCAAAATACATTTGAAACAAAATAAGCCGGTAAGGCAAATACAACTAAATTTAGCACATAACTGACCTAATCAAGGAAAGTAAAGAAAATACAATCAAATATAAGCCCACAACAGAACAAAATGACTTGAAACGAAACTCTAAACATCAACTGATTTTGTCCCTTGTTCGTTGTTGTACAGCGTCTTGGATATATGTTGAGGCCCTTCTTTTCATCTGTTTGCTTTTGCAACCTTGTGCACCCTCTTATTTTTTTCATATGAAAGTTTTGTTTTCAAAAGAAAAAAATGGGGAAAAGAAAAAATGAATCTGTCAATTGGGGTAATTTGAACTTAGAAGTTATTTTTAATTTATGTTTGATGTGATCACTCCAATAGTACTTACATTGATGTCATGCGACAATTTCAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGTTAGTGACAAATTAAATTTATGGTGGCAACGATCACATTATAATGATCGTTCGTTAAGTTTCATTAAATTGATAAAGCTCTGTGCACATTTTCCTCCAACAGAAGATTTGAAATTCTTTACTGTCTTAAAAGTCTACGTTTGCTGCAGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGGTTTAAACTTGGCAACTATGTTACCTTTTTGTCTCTGGCATCAATGAGAATTAACTAGAAATTATTACAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAACTCAATACACAGGTATGCATGCCTGCAACTTAGGAATGGACTGAATGGTGAAATGCTGTTTGTGCAATTTTTCCCCCCAACGTTAGCTTCTTTACTCTTCTGCATACTTTTATTGGCTTTGGTTCATACGTGAGCCGCATGACTACATCCCAATGGTCATCTTGACTCTTTATTTATAACTGGACTTGGTATGCATCAATATTCAGGTTGATTTAATGTTTAAGCGGTTTAATCTAGAAAAAATCTCAACTAGGGAAGTCATTTTAATTTCAACTAAAATGTCAAAGCTTGGAATTTTCACTTCTAAGTGTCCTTGAACTAAAATTTTAAAAATGTATATATCTGATCTTCAGAAACCTTCACTGATTGATCTATTTCCCGAACTTTCTAAATTGAAATATAATTTTCCTGGATGATTACTTCTTTTTAGCTGGTTTCTAACCGTGCTCATTGATTTCAAAATCCAACGGCAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGCTTCAAGTGGTAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAGTTTGCTAGTGCCGTCAGCATAAAGAGTTTAAGGGTTGAATGATTGAAGTTAAATGTTAAGTTTAAGATGATATTTTATTGATTGTTGATTAGTTATATTTTCCCTTGCCCTTTTGGATCCACTATTGTTTTTTAATTTTATGTCCATATCGTCTTGAATTTTTT

mRNA sequence

ATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAACTCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGCTTCAAGTGGTAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAG

Coding sequence (CDS)

ATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAACTCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGCTTCAAGTGGTAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAG
Homology
[Close]
BLAST of CSPI06G29630 vs. Swiss-Prot
Match: ELP4_ARATH (Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.4e-128
Identity = 238/363 (65.56%), Postives = 289/363 (79.61%), Query Frame = 1 

Query: 1   MAATKPRTSS-FSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R+SS FSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 120
           MED EAPHHM LLR +MSQGLV++QPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 240
            LS  +D CATFLS+ PRN  NI+S GRIAIQS C+P C++S  E +MLSF+R LKSM+ 
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSEKESDMLSFIRLLKSMLM 240

Query: 241 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 300
            SNAVA+VTFPPSLL PS SKR QHMADTLLS++AIPD DKEL KLLTGY+D+ G LN+H
Sbjct: 241 VSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKELEKLLTGYKDINGFLNIH 300

Query: 301 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 360
           KVA++NTQVP ILEA TFS+ L+KRR+L LECLNQAPVD SSG+SYG++GSC  SSK+ +
Sbjct: 301 KVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSSGTSYGTSGSC--SSKSGA 355

Query: 361 LEF 363
           L+F
Sbjct: 361 LDF 355

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BLAST of CSPI06G29630 vs. Swiss-Prot
Match: ELP4_DICDI (Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-24
Identity = 98/374 (26.20%), Postives = 182/374 (48.66%), Query Frame = 1 

Query: 12  SRNFSSAHSSKTPGFKHGPNG--------TTFISSGIPDLDKILCGGFPLGSLVLVMEDA 71
           + N S+  ++ T   K  PNG            S+G+ DLD I+ GG P+GS++++ ED 
Sbjct: 29  TNNTSTTTTTTTTAAKKLPNGCKISIKNSNLLTSTGLTDLDDIIGGGIPIGSILMIEEDI 88

Query: 72  EAPHHMLLLRNFMSQGLVHDQPLLYAS-PSRDPRGFLGTLPSP-------GASKDD---- 131
            + ++M LL+ F+++G++  Q + ++S    DP   L  LP+         A K+D    
Sbjct: 89  NSSYYMFLLKYFLAEGVLQQQGVFFSSLIGIDPFEILNKLPARITKEEEIEADKNDTTNN 148

Query: 132 -----KSRDNSTEQEKGLRIAWQYKKYFGDD------QESANAIDSKYEFCNDFDLRRPF 191
                 + +N+ +    L+IAW+Y++Y  ++      Q+SA+ I ++  FC+ +D  R  
Sbjct: 149 INTNINTNNNNKQPTDELKIAWRYQQYVSNELSKQQQQQSASTIMNQ-TFCHSYDFTRKM 208

Query: 192 DRHFFSGKHVECVS---ILDSSSLSTLRDRCATFLSQVPRNDGNISSGG------RIAIQ 251
           +    + + +  +S      +   S  R+      + V + +   +         R+ IQ
Sbjct: 209 NVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLEIQNLVYKYNKEAAMNPDQTRVLRLCIQ 268

Query: 252 SLCAPQCDHSNMEWEMLSFLRSLKSMVRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLS 311
           S  +P    SN E  ++ FL +LK ++RSS A  V++ P  +   +F K+  H+ DT++S
Sbjct: 269 SFSSPL--WSNDEEGVIEFLHALKGLLRSSVATCVISVPTYIYSGAFVKKIAHLCDTVVS 328

Query: 312 VRAIPDEDKELAKLLTGYQDMVGLLNVHKVAQLNT-QVPKILEATTFSIKLQKRRYLVLE 345
           + +      E  +    Y   +GL N+ K+A+LNT  +    +  TF  K+ KRR + +E
Sbjct: 329 INSFSGLGGETPEQFAEY---LGLFNIRKIARLNTLSLSFHPDMLTFVFKM-KRRKMCIE 388

[Close]
BLAST of CSPI06G29630 vs. Swiss-Prot
Match: ELP4_MOUSE (Elongator complex protein 4 OS=Mus musculus GN=Elp4 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 5.1e-20
Identity = 86/338 (25.44%), Postives = 155/338 (45.86%), Query Frame = 1 

Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHDQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+L+L+ ED    +  LL + FM++G+++   LL AS
Sbjct: 57  NGQLLVSTGLPALDQLLGGGLAVGTLLLIEEDKYNIYSPLLFKYFMAEGIINGHTLLVAS 116

Query: 91  PSRDPRGFLGTLPSPGASKDDKSR------DNSTEQEKGLRIAWQYKKYFGDDQESANAI 150
              +P   L  LP+P    + K          + E    ++IAW+Y+       E     
Sbjct: 117 AKENPAKILQELPAPLLDDNSKKELEDVHSAKTPEPNVNMKIAWRYQ--LQPKMEVGPVS 176

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSTLRDRCATFLSQVPR 210
            S++    D   R P++         FF  +H+      +S  LS    R   F+ +   
Sbjct: 177 SSRFGHYYDLSKRIPWELLQSSKWHGFFLPEHISPDLKGESCFLSCGYMRLLEFIQKSVY 236

Query: 211 NDGNISSGG--------RIAIQSL----------CAPQCDHSNMEWEMLSFLRSLKSMVR 270
            +G   +          RI IQ+L          C   CD+++    +  FL  L+ ++R
Sbjct: 237 AEGFDGANPQKKQKNILRIGIQNLGSPLWGDDICCKENCDNNH---RLTKFLYILRGLLR 296

Query: 271 SSNAVAVVTFPPSLLL-PSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNV 330
           SS +  ++T P  L+   S + R ++++DT++ + +    ++E   L   Y+D  GL+++
Sbjct: 297 SSLSACIITMPAHLVQNKSITTRVRNLSDTVVGLESFIGSERETNPL---YKDYHGLIHI 356

Query: 331 HKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAP 337
            K+ +LN       +    + KL KR+   +E L+  P
Sbjct: 357 RKIPRLNNLTCDESDVKDLAFKL-KRKLFTIERLHLPP 385

[Close]
BLAST of CSPI06G29630 vs. Swiss-Prot
Match: ELP4_BOVIN (Elongator complex protein 4 OS=Bos taurus GN=ELP4 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.3e-19
Identity = 88/358 (24.58%), Postives = 161/358 (44.97%), Query Frame = 1 

Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHDQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+++L+ ED    +  LL + F+++G+V    LL AS
Sbjct: 58  NGQLLVSTGLPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFKYFLAEGIVSGHALLVAS 117

Query: 91  PSRDPRGFLGTLPSP------GASKDDKSRDNSTEQEKGLRIAWQYKKYFGDDQESANAI 150
              DP   L  LP+P          D+    +  E +  ++IAW+Y+       E+    
Sbjct: 118 AKEDPADILQKLPAPLIDDSYKKECDEDVCSHKMEPDIKMKIAWRYQLL--PKMEAGPVS 177

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSTLRDRCATFLSQVPR 210
            S++    D   R P +         FF  + +     ++S SL+    +   F+  +  
Sbjct: 178 SSRFGHYYDISKRIPQELIETSKWHGFFLPEKISSAFNVESCSLTPGYMKLLQFIQNIIY 237

Query: 211 NDGNISSGG--------RIAIQSL----------CAPQCDHSNMEWEMLSFLRSLKSMVR 270
            +G   S          RI IQ+L          C   CD S+    +  FL  L+ ++R
Sbjct: 238 KEGFDGSNPQKKQKNILRIGIQNLGSPLWGDDICCTENCDTSH---SLTKFLYILRGLLR 297

Query: 271 SSNAVAVVTFPPSLLL-PSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNV 330
           +S +  ++T P  L+   +   R  +++DT++ + +    +KE   L   Y+D  GL+++
Sbjct: 298 TSLSACIITMPTHLIQNKAVIARVTNLSDTVVGLESFIGSEKETNPL---YKDYHGLIHI 357

Query: 331 HKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSK 357
            ++ +LN  +  I +    + KL+K+ + +       P D S   S  S    + S+K
Sbjct: 358 RQIPRLNNLIYDISDVKDLAFKLKKKLFTIERL--HLPPDLSDTVSRSSKQDLAESTK 405

[Close]
BLAST of CSPI06G29630 vs. Swiss-Prot
Match: ELP4_XENLA (Elongator complex protein 4 OS=Xenopus laevis GN=elp4 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-18
Identity = 94/364 (25.82%), Postives = 169/364 (46.43%), Query Frame = 1 

Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHDQPLLYAS 90
           NG   +S+G+P LD IL GG  +G+L+L+ ED    +  LLL+ F+++G+V    +  AS
Sbjct: 42  NGQLLVSTGVPSLDHILGGGLAVGTLLLIEEDTYGTYSHLLLKYFLAEGVVSGHEVFVAS 101

Query: 91  PSRDPRGFLGTLPSPGAS----KDDKSRDNST-----EQEKGLRIAWQYKKYFGDDQESA 150
            + DP   L  LPSP       ++D  R   T     + ++ ++IAW+Y+       E+ 
Sbjct: 102 ANDDPTETLQDLPSPLTDEVPRQNDPKRTKDTSGPADDSQEMMKIAWRYQNL--PKVETL 161

Query: 151 NAIDSKYEFCNDFDLRRPFD-----RHFFSGKHVECVSILDSSSLSTLRDRCATFLSQVP 210
               S++    D     P +       F+  + +      + S ++   ++    + +V 
Sbjct: 162 PISSSRFGHYYDLSKTMPPEMSAKSHRFYLPRIMSANQKQNVSEVTCNYNQLLESIQRVV 221

Query: 211 RNDGNISSGG--------RIAIQSL---------CA---PQCDHSNMEWEMLSFLRSLKS 270
             +G   S          R+ I+SL         C+   P+  HS     +  FL  L+ 
Sbjct: 222 HQEGYDGSNPQKRPKTILRLGIESLGSVLWADDICSQERPENQHS-----LTRFLYGLRG 281

Query: 271 MVRSSNAVAVVTFPPSLLL-PSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGL 330
           ++R+S +V V+T P  L+   + + R + ++DT++ + +    + E   L   Y+D  GL
Sbjct: 282 LLRTSLSVCVITVPTYLIQNKAITTRLRSLSDTVVGLESFIGSEMEANPL---YKDYHGL 341

Query: 331 LNVHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSS 360
           L+VH++ +LN+ +    +    + KL KR+   +E L+  P D S   S  S    +GS+
Sbjct: 342 LHVHQIPRLNSLISDGSDTKDLAFKL-KRKIFAIERLH-LPPDLSDTVSRSSKQDLAGSA 393

[Close]
BLAST of CSPI06G29630 vs. TrEMBL
Match: A0A0A0KLQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 2.0e-204
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 363
           EF
Sbjct: 361 EF 362

[Close]
BLAST of CSPI06G29630 vs. TrEMBL
Match: M5X0U1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 7.4e-159
Identity = 283/362 (78.18%), Postives = 318/362 (87.85%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           M+ TK RTSSFSRNF+SA+SS+ PG KHGPNGT FISSGIPDLDKIL GGF LGSLV+VM
Sbjct: 1   MSVTKTRTSSFSRNFASANSSQIPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +Q
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q S ++   K+EFCN+FDLR+P +R F SGKH++C+SI DS +
Sbjct: 121 EKGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPN 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           L TL DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNMEWEMLSF+RSLK MVRS
Sbjct: 181 LVTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNMEWEMLSFVRSLKGMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVA VTFPP+LL PS  KRWQHMADTLLSV+AIPDEDKEL KLLTGYQDMVGLLNV K
Sbjct: 241 SNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLNVQK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VA+LNTQVP ILEATT SIKL+KRR++VLECLNQAP+D SSGSSYG+TGSCS SSK+ +L
Sbjct: 301 VARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKSGTL 360

Query: 361 EF 363
           +F
Sbjct: 361 DF 362

[Close]
BLAST of CSPI06G29630 vs. TrEMBL
Match: A0A0D2T2L5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G084700 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 3.8e-155
Identity = 281/362 (77.62%), Postives = 315/362 (87.02%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAA K RTS+FSRN S+A  S  PG K GPNGT F+SSGIPDLDKIL GGFPLGSLV+VM
Sbjct: 1   MAAAKTRTSTFSRNLSTAPPSHGPGLKCGPNGTVFLSSGIPDLDKILGGGFPLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFM+QGLV  Q LLY+SP+RDPRGFLGTLPSP ASKDDKSR+   +Q
Sbjct: 61  EDAEAPHHMLLLRNFMAQGLVLGQHLLYSSPARDPRGFLGTLPSPAASKDDKSRERDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q      D K+E+ N+FDLR+P +RHF +G  ++CVSI DS  
Sbjct: 121 EKGLRIAWQYKKYFGENQLDGQR-DGKHEYSNEFDLRKPLERHFINGPRIDCVSIQDSD- 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQ PRNDG+IS  GRIAIQS CAPQC +SNMEW+MLSF+RSLKSMVRS
Sbjct: 181 LSTLRDRCATFLSQFPRNDGSISCAGRIAIQSFCAPQCAYSNMEWDMLSFIRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SN+VA+VTFPPSLL PSF KRWQHMADTLLSV+AI DEDKELA+LLTGYQDMVG LNVHK
Sbjct: 241 SNSVAIVTFPPSLLSPSFCKRWQHMADTLLSVKAIQDEDKELAQLLTGYQDMVGFLNVHK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VA++NTQVP ILEATTFSIKLQKRRYLVLECLNQAPVD SSG+SYG++G CS SSKT +L
Sbjct: 301 VARINTQVPVILEATTFSIKLQKRRYLVLECLNQAPVDGSSGTSYGTSGGCSSSSKTGNL 360

Query: 361 EF 363
           +F
Sbjct: 361 DF 360

[Close]
BLAST of CSPI06G29630 vs. TrEMBL
Match: B9HSP5_POPTR (Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 8.5e-155
Identity = 271/363 (74.66%), Postives = 319/363 (87.88%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATK R SSFSRN S+  + + PG K GPNGT F+SSGIPDLDKIL GGFPLGSLV++M
Sbjct: 1   MAATKTRISSFSRNISAVSAPQLPGIKCGPNGTFFVSSGIPDLDKILGGGFPLGSLVMIM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLV +QPLLYASP++DPRGFLGTLP P +SKDDKSR++ TEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAI-DSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           EKGLRIAWQYKKYF ++Q++ +   DS  EFCNDFDLR+P ++HF+SG+ V+CVSI DS 
Sbjct: 121 EKGLRIAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKDSP 180

Query: 181 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 240
           +L+TL DRCATFL+Q PRNDG+ S  GRIAIQSLCAPQC+ S M+W+MLSF+RSLKSM+R
Sbjct: 181 NLATLHDRCATFLAQFPRNDGSFSCMGRIAIQSLCAPQCELSKMDWDMLSFIRSLKSMLR 240

Query: 241 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 300
           S+NAVA++TFP SLL PSF KRWQHMAD LLSV+AIPDEDKEL KLLTGYQDMVG LNVH
Sbjct: 241 SANAVAIITFPSSLLSPSFCKRWQHMADVLLSVKAIPDEDKELGKLLTGYQDMVGFLNVH 300

Query: 301 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 360
           K+A++NTQVP ILEATTFSIKL KRR+LVLECLNQAP+D SSG+SYG++G CSGSS++ +
Sbjct: 301 KIARINTQVPMILEATTFSIKLHKRRFLVLECLNQAPIDGSSGTSYGTSGGCSGSSRSGA 360

Query: 361 LEF 363
           L+F
Sbjct: 361 LDF 363

[Close]
BLAST of CSPI06G29630 vs. TrEMBL
Match: A0A0B0P040_GOSAR (Elongator complex 4 OS=Gossypium arboreum GN=F383_07553 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 1.1e-154
Identity = 278/362 (76.80%), Postives = 313/362 (86.46%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAA K RTS+FSRN S+A  S  PG K GPNGT F+SSGIPDLDKIL GGFPLGSLV+VM
Sbjct: 1   MAAAKTRTSTFSRNLSTAAPSHGPGLKCGPNGTVFLSSGIPDLDKILGGGFPLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFM+QGLV  QPLLY+SP+RDPRGFLGTLPSP ASKDDKS++   +Q
Sbjct: 61  EDAEAPHHMLLLRNFMAQGLVLGQPLLYSSPARDPRGFLGTLPSPAASKDDKSQERDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG+ Q      DSK+E+ N+FDLR+P +RHF +G  ++CVSI D   
Sbjct: 121 EKGLRIAWQYKKYFGESQLDGQR-DSKHEYSNEFDLRKPLERHFINGPRIDCVSIQDCPD 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQ PRNDG+IS  GRIAIQS CAPQC +SNMEW+MLSF+R LKSMVRS
Sbjct: 181 LSTLRDRCATFLSQFPRNDGSISCAGRIAIQSFCAPQCAYSNMEWDMLSFIRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SN+VA++TFPPSLL PSF KRWQHMADTLLSV+AI DEDKELA+LLTGYQDMVG LNVHK
Sbjct: 241 SNSVAIITFPPSLLSPSFCKRWQHMADTLLSVKAIQDEDKELAQLLTGYQDMVGFLNVHK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VA++NTQVP ILEATTFSIKLQKRRYLVLECLNQAPVD SSG+SYG++G  S SSKT +L
Sbjct: 301 VARINTQVPVILEATTFSIKLQKRRYLVLECLNQAPVDGSSGTSYGTSGGWSSSSKTGNL 360

Query: 361 EF 363
           +F
Sbjct: 361 DF 361

[Close]
BLAST of CSPI06G29630 vs. TAIR10
Match: AT3G11220.2 (AT3G11220.2 Paxneb protein-related)

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-125
Identity = 237/381 (62.20%), Postives = 289/381 (75.85%), Query Frame = 1 

Query: 1   MAATKPRTSS-FSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R+SS FSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 120
           MED EAPHHM LLR +MSQGLV++QPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSTLRDRCATFLSQVP------------------RNDGNISSGGRIAIQSLCAPQCDHS 240
            LS  +D CATFLS+ P                  +N  NI+S GRIAIQS C+P C++S
Sbjct: 181 DLSIAQDHCATFLSKFPSKFCSSSILFTSLLYFQAQNSSNIASIGRIAIQSFCSPLCEYS 240

Query: 241 NMEWEMLSFLRSLKSMVRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKE 300
             E +MLSF+R LKSM+  SNAVA+VTFPPSLL PS SKR QHMADTLLS++AIPD DKE
Sbjct: 241 EKESDMLSFIRLLKSMLMVSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKE 300

Query: 301 LAKLLTGYQDMVGLLNVHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASS 360
           L KLLTGY+D+ G LN+HKVA++NTQVP ILEA TFS+ L+KRR+L LECLNQAPVD SS
Sbjct: 301 LEKLLTGYKDINGFLNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSS 360

Query: 361 GSSYGSTGSCSGSSKTASLEF 363
           G+SYG++GSC  SSK+ +L+F
Sbjct: 361 GTSYGTSGSC--SSKSGALDF 373

[Close]
BLAST of CSPI06G29630 vs. NCBI nr
Match: gi|449451375|ref|XP_004143437.1| (PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 719.5 bits (1856), Expect = 2.9e-204
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 363
           EF
Sbjct: 361 EF 362

[Close]
BLAST of CSPI06G29630 vs. NCBI nr
Match: gi|659079925|ref|XP_008440520.1| (PREDICTED: elongator complex protein 4 [Cucumis melo])

HSP 1 Score: 698.7 bits (1802), Expect = 5.2e-198
Identity = 349/362 (96.41%), Postives = 354/362 (97.79%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRT SFSRNFSSAHSSKTPG+KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LS  RDRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNMEWEMLSFLR LKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPPSLL PSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VAQ+NTQVPKILEATTFSIKLQKRRYLVLECLNQAP+D SSGSSYGSTGSCSGSSKTASL
Sbjct: 301 VAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTASL 360

Query: 361 EF 363
           EF
Sbjct: 361 EF 362

[Close]
BLAST of CSPI06G29630 vs. NCBI nr
Match: gi|778718945|ref|XP_011657939.1| (PREDICTED: elongator complex protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 1.0e-169
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1 

Query: 60  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 119
           MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE
Sbjct: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60

Query: 120 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 179
           QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS
Sbjct: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120

Query: 180 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 239
           SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR
Sbjct: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180

Query: 240 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 299
           SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH
Sbjct: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240

Query: 300 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 359
           KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS
Sbjct: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300

Query: 360 LEF 363
           LEF
Sbjct: 301 LEF 303

[Close]
BLAST of CSPI06G29630 vs. NCBI nr
Match: gi|595862862|ref|XP_007211476.1| (hypothetical protein PRUPE_ppa007585mg [Prunus persica])

HSP 1 Score: 568.2 bits (1463), Expect = 1.1e-158
Identity = 283/362 (78.18%), Postives = 318/362 (87.85%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           M+ TK RTSSFSRNF+SA+SS+ PG KHGPNGT FISSGIPDLDKIL GGF LGSLV+VM
Sbjct: 1   MSVTKTRTSSFSRNFASANSSQIPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +Q
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q S ++   K+EFCN+FDLR+P +R F SGKH++C+SI DS +
Sbjct: 121 EKGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPN 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           L TL DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNMEWEMLSF+RSLK MVRS
Sbjct: 181 LVTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNMEWEMLSFVRSLKGMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVA VTFPP+LL PS  KRWQHMADTLLSV+AIPDEDKEL KLLTGYQDMVGLLNV K
Sbjct: 241 SNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLNVQK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VA+LNTQVP ILEATT SIKL+KRR++VLECLNQAP+D SSGSSYG+TGSCS SSK+ +L
Sbjct: 301 VARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKSGTL 360

Query: 361 EF 363
           +F
Sbjct: 361 DF 362

[Close]
BLAST of CSPI06G29630 vs. NCBI nr
Match: gi|645234609|ref|XP_008223887.1| (PREDICTED: elongator complex protein 4 isoform X1 [Prunus mume])

HSP 1 Score: 567.4 bits (1461), Expect = 1.8e-158
Identity = 282/362 (77.90%), Postives = 320/362 (88.40%), Query Frame = 1 

Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           M+ATK RTSSFSRNF+SA+SS+ PG KHGPNGT FISSGIPDLDKIL GGF LGSLV+VM
Sbjct: 1   MSATKTRTSSFSRNFASANSSQIPGLKHGPNGTVFISSGIPDLDKILGGGFSLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +Q
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q S+++   K+EFCN+FDLR+P +R F SGKH++C+SI DS +
Sbjct: 121 EKGLRIAWQYKKYFGENQHSSDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPN 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           L TL DRCATFLS+ PR+D +ISS GRIAIQS CAPQC+ SNMEW+MLSF+RSLK MVRS
Sbjct: 181 LVTLNDRCATFLSRFPRSDRSISSVGRIAIQSFCAPQCEFSNMEWDMLSFVRSLKGMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVHK 300
           SNAVAVVTFPP+LL PS  KRWQHMADTLLSV+AIPDEDKEL KLLTGYQDMVGLLNV K
Sbjct: 241 SNAVAVVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLNVQK 300

Query: 301 VAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTASL 360
           VA+LNTQVP ILEATT SIKL+KRR++VLECLNQAP+D SSGSSYG+TGSCS SSK+ +L
Sbjct: 301 VARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKSGTL 360

Query: 361 EF 363
           +F
Sbjct: 361 DF 362

The following BLAST results are available for this feature:
BLAST of CSPI06G29630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ELP4_ARATH4.4e-12865.56Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1[more]
ELP4_DICDI4.5e-2426.20Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV... [more]
ELP4_MOUSE5.1e-2025.44Elongator complex protein 4 OS=Mus musculus GN=Elp4 PE=1 SV=2[more]
ELP4_BOVIN3.3e-1924.58Elongator complex protein 4 OS=Bos taurus GN=ELP4 PE=2 SV=1[more]
ELP4_XENLA1.7e-1825.82Elongator complex protein 4 OS=Xenopus laevis GN=elp4 PE=2 SV=1[more]
BLAST of CSPI06G29630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLQ1_CUCSA2.0e-204100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1[more]
M5X0U1_PRUPE7.4e-15978.18Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1[more]
A0A0D2T2L5_GOSRA3.8e-15577.62Uncharacterized protein OS=Gossypium raimondii GN=B456_008G084700 PE=4 SV=1[more]
B9HSP5_POPTR8.5e-15574.66Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1[more]
A0A0B0P040_GOSAR1.1e-15476.80Elongator complex 4 OS=Gossypium arboreum GN=F383_07553 PE=4 SV=1[more]
BLAST of CSPI06G29630 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11220.21.6e-12562.20 Paxneb protein-related[more]
BLAST of CSPI06G29630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449451375|ref|XP_004143437.1|2.9e-204100.00PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus][more]
gi|659079925|ref|XP_008440520.1|5.2e-19896.41PREDICTED: elongator complex protein 4 [Cucumis melo][more]
gi|778718945|ref|XP_011657939.1|1.0e-169100.00PREDICTED: elongator complex protein 4 isoform X2 [Cucumis sativus][more]
gi|595862862|ref|XP_007211476.1|1.1e-15878.18hypothetical protein PRUPE_ppa007585mg [Prunus persica][more]
gi|645234609|ref|XP_008223887.1|1.8e-15877.90PREDICTED: elongator complex protein 4 isoform X1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008728Elongator_complex_protein_4
IPR027417P-loop_NTPase
IPR008728Elongator_complex_protein_4
IPR027417P-loop_NTPase
IPR008728Elongator_complex_protein_4
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
GO:0033588Elongator holoenzyme complex
GO:0033588Elongator holoenzyme complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0002098 tRNA wobble uridine modification
cellular_component GO:0033588 Elongator holoenzyme complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G29630.3CSPI06G29630.3mRNA
CSPI06G29630.2CSPI06G29630.2mRNA
CSPI06G29630.1CSPI06G29630.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008728Elongator complex protein 4PANTHERPTHR12896PAX6 NEIGHBOR PROTEIN PAXNEBcoord: 1..298
score: 1.7E
IPR008728Elongator complex protein 4PFAMPF05625PAXNEBcoord: 1..303
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G29630Cla014093Watermelon (97103) v1cpiwmB519
CSPI06G29630Csa6G497360Cucumber (Chinese Long) v2cpicuB313
CSPI06G29630MELO3C007703Melon (DHL92) v3.5.1cpimeB508
CSPI06G29630ClCG01G018260Watermelon (Charleston Gray)cpiwcgB453
CSPI06G29630MELO3C007703.2Melon (DHL92) v3.6.1cpimedB493
CSPI06G29630CsaV3_6G044840Cucumber (Chinese Long) v3cpicucB363
CSPI06G29630Cla97C01G017530Watermelon (97103) v2cpiwmbB433
CSPI06G29630Bhi03G001328Wax gourdcpiwgoB638
CSPI06G29630Cucsa.103850Cucumber (Gy14) v1cgycpiB122
CSPI06G29630CmaCh07G005820Cucurbita maxima (Rimu)cmacpiB893
CSPI06G29630CmoCh07G005870Cucurbita moschata (Rifu)cmocpiB873
CSPI06G29630Cp4.1LG19g10000Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G29630CsGy6G029140Cucumber (Gy14) v2cgybcpiB287
CSPI06G29630Carg18491Silver-seed gourdcarcpiB0003
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G29630Wild cucumber (PI 183967)cpicpiB082
CSPI06G29630Wild cucumber (PI 183967)cpicpiB085
CSPI06G29630Wild cucumber (PI 183967)cpicpiB136
CSPI06G29630Cucumber (Gy14) v1cgycpiB248
CSPI06G29630Cucumber (Gy14) v1cgycpiB476
CSPI06G29630Cucurbita maxima (Rimu)cmacpiB195
CSPI06G29630Cucurbita maxima (Rimu)cmacpiB202
CSPI06G29630Cucurbita maxima (Rimu)cmacpiB689
CSPI06G29630Cucurbita moschata (Rifu)cmocpiB180
CSPI06G29630Cucurbita moschata (Rifu)cmocpiB188
CSPI06G29630Cucurbita moschata (Rifu)cmocpiB681
CSPI06G29630Cucumber (Chinese Long) v2cpicuB278
CSPI06G29630Cucumber (Chinese Long) v2cpicuB297
CSPI06G29630Melon (DHL92) v3.5.1cpimeB471
CSPI06G29630Melon (DHL92) v3.5.1cpimeB483
CSPI06G29630Watermelon (Charleston Gray)cpiwcgB451
CSPI06G29630Watermelon (Charleston Gray)cpiwcgB538
CSPI06G29630Watermelon (97103) v1cpiwmB487
CSPI06G29630Watermelon (97103) v1cpiwmB554
CSPI06G29630Cucurbita pepo (Zucchini)cpecpiB080
CSPI06G29630Cucurbita pepo (Zucchini)cpecpiB848
CSPI06G29630Cucurbita pepo (Zucchini)cpecpiB841
CSPI06G29630Bottle gourd (USVL1VR-Ls)cpilsiB439
CSPI06G29630Bottle gourd (USVL1VR-Ls)cpilsiB462
CSPI06G29630Bottle gourd (USVL1VR-Ls)cpilsiB485
CSPI06G29630Bottle gourd (USVL1VR-Ls)cpilsiB492
CSPI06G29630Melon (DHL92) v3.6.1cpimedB462
CSPI06G29630Melon (DHL92) v3.6.1cpimedB471
CSPI06G29630Cucumber (Gy14) v2cgybcpiB082
CSPI06G29630Silver-seed gourdcarcpiB0446
CSPI06G29630Cucumber (Chinese Long) v3cpicucB326
CSPI06G29630Cucumber (Chinese Long) v3cpicucB328
CSPI06G29630Watermelon (97103) v2cpiwmbB448
CSPI06G29630Watermelon (97103) v2cpiwmbB522
CSPI06G29630Watermelon (97103) v2cpiwmbB528
CSPI06G29630Wax gourdcpiwgoB631
CSPI06G29630Wax gourdcpiwgoB654