CSPI06G29630.3 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G29630.3
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Elongator complex 4
Location	Chr6 : 25671741 .. 25675024 (-)
Sequence length	912

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATATCCTACATTTGGACTAGCTTCAATTTCTCCATTTTTTTGGTTGCAGAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTGATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGTGCTATACTTTTTATTAACTTATGCAACTATTCGATTTCGGATTTAGATGGAAAGATGTATGATCGGATTGGCTTTATTTCAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGGTAATCTTACTGACCTCAACCTAATAGTTTTTGGCTGGTGTTTGATCTCAATGAACAACAACCAATGAATTGTTTTAATTATGTGGTGAAACTGCTTGTCATATTATGATGAAGTCTTCTGGGAAAAAGTACAACTTTCTGTCAACTTTCATGTAGTATATGTACTTAGTTCATGTCCATTCGAGGATTGCAGTACAACTTTCATCCTGACCTGTTTCTCATGTTACAAAAACATCTTGAAATCTATTCATTTTTCCCAACCCCTTCAATAATGACTCACTCTCACTGCCACAACCTTAAATATAGTGCAATACTGTTCTTATTGGAGATAATTATGTAATTCTTGTACAGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGGTACGGTTGACCTCTGCTTTCCCTCCTAAATTACATATATTAAAGTCATTGCATTAGTAAGTTAGATTCAATTTCAATTCATTGTAAAATATTTGAAGCGGCCATTGGGATCTAGAGAACGTTTGATAAACCTGTGCTAGCTTCTCTTTGAGATGGAAATAGTTGGATTGGGATCTTGGGTTAGATTCTGTATCTCCTCGTTGGGATTTGGAGAACGTTTGATAAAGAAAAATAGGGTCTTCTTATCTAATATAGAGGTGATTGGGATTTGGAACATAATTGGGCATCAAATTACATCATGCAGTGTTTTCATGACATGTAGTTTTTGCTAAACGCAACCATCAGAGCTCATTTTCTAACTCCAAATACAAGAGCAATAACTTTAGGCCTATATGAAATGAACTATTCTGGATTTGATCTGTAATTTATCCCACCTTCAGATTTGGCATCCAAGAAAACCTTTTGTTAGAGAGTGGGCGTGGAATCTATTTGGGAGAAAACCTGAATTGTGGACTGAATTGATTATTGTTTATTATTATTTTCTGAAAGGAAACCAGTTTTTCATTGATGAAATGAAAAGATACTAATGTGCAAAATACATTTGAAACAAAATAAGCCGGTAAGGCAAATACAACTAAATTTAGCACATAACTGACCTAATCAAGGAAAGTAAAGAAAATACAATCAAATATAAGCCCACAACAGAACAAAATGACTTGAAACGAAACTCTAAACATCAACTGATTTTGTCCCTTGTTCGTTGTTGTACAGCGTCTTGGATATATGTTGAGGCCCTTCTTTTCATCTGTTTGCTTTTGCAACCTTGTGCACCCTCTTATTTTTTTCATATGAAAGTTTTGTTTTCAAAAGAAAAAAATGGGGAAAAGAAAAAATGAATCTGTCAATTGGGGTAATTTGAACTTAGAAGTTATTTTTAATTTATGTTTGATGTGATCACTCCAATAGTACTTACATTGATGTCATGCGACAATTTCAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGTTAGTGACAAATTAAATTTATGGTGGCAACGATCACATTATAATGATCGTTCGTTAAGTTTCATTAAATTGATAAAGCTCTGTGCACATTTTCCTCCAACAGAAGATTTGAAATTCTTTACTGTCTTAAAAGTCTACGTTTGCTGCAGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGGTTTAAACTTGGCAACTATGTTACCTTTTTGTCTCTGGCATCAATGAGAATTAACTAGAAATTATTACAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAACTCAATACACAGGTATGCATGCCTGCAACTTAGGAATGGACTGAATGGTGAAATGCTGTTTGTGCAATTTTTCCCCCCAACGTTAGCTTCTTTACTCTTCTGCATACTTTTATTGGCTTTGGTTCATACGTGAGCCGCATGACTACATCCCAATGGTCATCTTGACTCTTTATTTATAACTGGACTTGGTATGCATCAATATTCAGGTTGATTTAATGTTTAAGCGGTTTAATCTAGAAAAAATCTCAACTAGGGAAGTCATTTTAATTTCAACTAAAATGTCAAAGCTTGGAATTTTCACTTCTAAGTGTCCTTGAACTAAAATTTTAAAAATGTATATATCTGATCTTCAGAAACCTTCACTGATTGATCTATTTCCCGAACTTTCTAAATTGAAATATAATTTTCCTGGATGATTACTTCTTTTTAGCTGGTTTCTAACCGTGCTCATTGATTTCAAAATCCAACGGCAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGCTTCAAGTGGTAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAGTTTGCTAGTGCCGTCAGCATAAAGAGTTTAAGGGTTGAATGATTGAAGTTAAATGTTAAGTTTAAGATGATATTTTATTGATTGTTGATTAGTTATATTTTCCCTTGCCCTTTTGGATCCACTATTGTTTTTTAATTTTATGTCCATATCGTCTTGAATTTTTT

mRNA sequence

ATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAACTCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGCTTCAAGTGGTAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAG

Coding sequence (CDS)

ATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAACTCAATACACAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGCTTCAAGTGGTAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAG

Homology

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BLAST of CSPI06G29630.3 vs. Swiss-Prot
Match: ELP4_ARATH (Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.5e-108
Identity = 198/303 (65.35%), Postives = 244/303 (80.53%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MED EAPHHM LLR +MSQGLV++QPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
            LS  +D CATFLS+ PRN  NI+S GRIAIQS C+P C++S  E +MLSF+R LKSM+ 
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSEKESDMLSFIRLLKSMLM 240

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
            SNAVA+VTFPPSLL PS SKR QHMADTLLS++AIPD DKEL KLLTGY+D+ G LN+H
Sbjct: 241 VSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKELEKLLTGYKDINGFLNIH 300

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KVA++NTQVP ILEA TFS+ L+KRR+L LECLNQAPVD SSG+SYG++GSC  SSK+ +
Sbjct: 301 KVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSSGTSYGTSGSC--SSKSGA 355

Query: 301 LEF 304
           L+F
Sbjct: 361 LDF 355

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BLAST of CSPI06G29630.3 vs. Swiss-Prot
Match: ELP4_DICDI (Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.9e-16
Identity = 80/317 (25.24%), Postives = 152/317 (47.95%), Query Frame = 1


Query: 2   EDAEAPHHMLLLRNFMSQGLVHDQPLLYASP-SRDPRGFLGTLPSP-------GASKDD- 61
           ED  + ++M LL+ F+++G++  Q + ++S    DP   L  LP+         A K+D 
Sbjct: 86  EDINSSYYMFLLKYFLAEGVLQQQGVFFSSLIGIDPFEILNKLPARITKEEEIEADKNDT 145

Query: 62  --------KSRDNSTEQEKGLRIAWQYKKYFGDD------QESANAIDSKYEFCNDFDLR 121
                    + +N+ +    L+IAW+Y++Y  ++      Q+SA+ I ++  FC+ +D  
Sbjct: 146 TNNINTNINTNNNNKQPTDELKIAWRYQQYVSNELSKQQQQQSASTIMNQ-TFCHSYDFT 205

Query: 122 RPFDRHFFSGKHVECVSI---LDSSSLSTLRDRCATFLSQVPRNDGNISSGG------RI 181
           R  +    + + +  +S      +   S  R+      + V + +   +         R+
Sbjct: 206 RKMNVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLEIQNLVYKYNKEAAMNPDQTRVLRL 265

Query: 182 AIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRSSNAVAVVTFPPSLLLPSFSKRWQHMADT 241
            IQS  +P    SN E  ++ FL +LK ++RSS A  V++ P  +   +F K+  H+ DT
Sbjct: 266 CIQSFSSPLW--SNDEEGVIEFLHALKGLLRSSVATCVISVPTYIYSGAFVKKIAHLCDT 325

Query: 242 LLSVRAIPDEDKELAKLLTGYQDMVGLLNVHKVAQLNT-QVPKILEATTFSIKLQKRRYL 286
           ++S+ +      E  +    Y   +GL N+ K+A+LNT  +    +  TF  K+ KRR +
Sbjct: 326 VVSINSFSGLGGETPEQFAEY---LGLFNIRKIARLNTLSLSFHPDMLTFVFKM-KRRKM 385

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BLAST of CSPI06G29630.3 vs. TrEMBL
Match: A0A0A0KLQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 7.8e-170
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS
Sbjct: 120 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 179

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR
Sbjct: 180 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 239

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH
Sbjct: 240 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 299

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS
Sbjct: 300 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 359

Query: 301 LEF 304
           LEF
Sbjct: 360 LEF 362

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BLAST of CSPI06G29630.3 vs. TrEMBL
Match: M5X0U1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.9e-132
Identity = 236/303 (77.89%), Postives = 266/303 (87.79%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPD 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFG++Q S ++   K+EFCN+FDLR+P +R F SGKH++C+SI DS 
Sbjct: 120 QEKGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSP 179

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           +L TL DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNMEWEMLSF+RSLK MVR
Sbjct: 180 NLVTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNMEWEMLSFVRSLKGMVR 239

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           SSNAVA VTFPP+LL PS  KRWQHMADTLLSV+AIPDEDKEL KLLTGYQDMVGLLNV 
Sbjct: 240 SSNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLNVQ 299

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KVA+LNTQVP ILEATT SIKL+KRR++VLECLNQAP+D SSGSSYG+TGSCS SSK+ +
Sbjct: 300 KVARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKSGT 359

Query: 301 LEF 304
           L+F
Sbjct: 360 LDF 362

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BLAST of CSPI06G29630.3 vs. TrEMBL
Match: A0A067L8R3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01277 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 3.8e-132
Identity = 231/303 (76.24%), Postives = 267/303 (88.12%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLV +QPLLYASPS+DPRGFLGTLPSP +SKDDK R++  E
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVQNQPLLYASPSKDPRGFLGTLPSPSSSKDDKLRNHDAE 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFG++Q+S N  D+K EFCNDFDLR+P +RHF+SG+ V+C+S  DS 
Sbjct: 120 QEKGLRIAWQYKKYFGENQQSFNGKDTKQEFCNDFDLRKPLERHFYSGQRVDCISFKDSQ 179

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           +L  L D C TFLSQ PRNDG+ISS GRIAIQSLCAPQC++SNMEW++LSF+RSLK M++
Sbjct: 180 NLVALHDHCTTFLSQFPRNDGSISSIGRIAIQSLCAPQCEYSNMEWDVLSFIRSLKCMLQ 239

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           S+NAVAV+TFP SLL     KRWQHMAD LLSV+AIPD+DKELAKLLTGYQDMVG LN+H
Sbjct: 240 SANAVAVITFPSSLLSEPICKRWQHMADILLSVKAIPDDDKELAKLLTGYQDMVGFLNIH 299

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KV + NTQVP ILEATTFSIKLQKRR+LVLECLNQAP+D SSGSSYG++ SCSGSSKT +
Sbjct: 300 KVVRFNTQVPLILEATTFSIKLQKRRFLVLECLNQAPIDGSSGSSYGTSSSCSGSSKTGT 359

Query: 301 LEF 304
           L+F
Sbjct: 360 LDF 362

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BLAST of CSPI06G29630.3 vs. TrEMBL
Match: B9T5X5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0339580 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 8.4e-132
Identity = 231/304 (75.99%), Postives = 274/304 (90.13%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGL+ +QPLLY+SPS++PR FLGTLPSP +SKDDK R +  E
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLIQNQPLLYSSPSKEPRVFLGTLPSPSSSKDDKLRKHHPE 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAI-DSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDS 120
           +EKGLRIAWQYKKYFG++Q++ +   DSK EFCNDFDLR+P +RHFFSG+ V+CVS+ DS
Sbjct: 120 EEKGLRIAWQYKKYFGENQQTFDGHRDSKQEFCNDFDLRKPLERHFFSGQRVDCVSVNDS 179

Query: 121 SSLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMV 180
            +L+TL+DRC+ FL+Q PRNDG ISS GRIAIQSLCAPQC++SN EWE+LSF+RSLKSM+
Sbjct: 180 PNLATLQDRCSAFLAQFPRNDGGISSIGRIAIQSLCAPQCEYSNKEWEVLSFIRSLKSML 239

Query: 181 RSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNV 240
           RS+NAVAV+TFPPSLL  SF KRWQHM+D LLSV+AIPD+DKELAKLLTGYQDM+G LNV
Sbjct: 240 RSANAVAVITFPPSLLSDSFCKRWQHMSDILLSVKAIPDDDKELAKLLTGYQDMIGFLNV 299

Query: 241 HKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTA 300
           HKV ++NTQVP IL+ATTFSIKL KRRYLVLECLNQAP+D+SSGSSYG++GSCSGSSKT 
Sbjct: 300 HKVVRINTQVPLILDATTFSIKLHKRRYLVLECLNQAPIDSSSGSSYGASGSCSGSSKTG 359

Query: 301 SLEF 304
           +L+F
Sbjct: 360 NLDF 363

[Close]

BLAST of CSPI06G29630.3 vs. TrEMBL
Match: B9HSP5_POPTR (Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 4.2e-131
Identity = 229/304 (75.33%), Postives = 271/304 (89.14%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLV +QPLLYASP++DPRGFLGTLP P +SKDDKSR++ TE
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTE 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAI-DSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDS 120
           QEKGLRIAWQYKKYF ++Q++ +   DS  EFCNDFDLR+P ++HF+SG+ V+CVSI DS
Sbjct: 120 QEKGLRIAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKDS 179

Query: 121 SSLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMV 180
            +L+TL DRCATFL+Q PRNDG+ S  GRIAIQSLCAPQC+ S M+W+MLSF+RSLKSM+
Sbjct: 180 PNLATLHDRCATFLAQFPRNDGSFSCMGRIAIQSLCAPQCELSKMDWDMLSFIRSLKSML 239

Query: 181 RSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNV 240
           RS+NAVA++TFP SLL PSF KRWQHMAD LLSV+AIPDEDKEL KLLTGYQDMVG LNV
Sbjct: 240 RSANAVAIITFPSSLLSPSFCKRWQHMADVLLSVKAIPDEDKELGKLLTGYQDMVGFLNV 299

Query: 241 HKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTA 300
           HK+A++NTQVP ILEATTFSIKL KRR+LVLECLNQAP+D SSG+SYG++G CSGSS++ 
Sbjct: 300 HKIARINTQVPMILEATTFSIKLHKRRFLVLECLNQAPIDGSSGTSYGTSGGCSGSSRSG 359

Query: 301 SLEF 304
           +L+F
Sbjct: 360 ALDF 363

[Close]

BLAST of CSPI06G29630.3 vs. TAIR10
Match: AT3G11220.2 (AT3G11220.2 Paxneb protein-related)

HSP 1 Score: 379.4 bits (973), Expect = 2.1e-105
Identity = 197/321 (61.37%), Postives = 244/321 (76.01%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MED EAPHHM LLR +MSQGLV++QPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 121 SLSTLRDRCATFLSQVP------------------RNDGNISSGGRIAIQSLCAPQCDHS 180
            LS  +D CATFLS+ P                  +N  NI+S GRIAIQS C+P C++S
Sbjct: 181 DLSIAQDHCATFLSKFPSKFCSSSILFTSLLYFQAQNSSNIASIGRIAIQSFCSPLCEYS 240

Query: 181 NMEWEMLSFLRSLKSMVRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKE 240
             E +MLSF+R LKSM+  SNAVA+VTFPPSLL PS SKR QHMADTLLS++AIPD DKE
Sbjct: 241 EKESDMLSFIRLLKSMLMVSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKE 300

Query: 241 LAKLLTGYQDMVGLLNVHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASS 300
           L KLLTGY+D+ G LN+HKVA++NTQVP ILEA TFS+ L+KRR+L LECLNQAPVD SS
Sbjct: 301 LEKLLTGYKDINGFLNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSS 360

Query: 301 GSSYGSTGSCSGSSKTASLEF 304
           G+SYG++GSC  SSK+ +L+F
Sbjct: 361 GTSYGTSGSC--SSKSGALDF 373

[Close]

BLAST of CSPI06G29630.3 vs. NCBI nr
Match: gi|449451375|ref|XP_004143437.1| (PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 604.4 bits (1557), Expect = 1.1e-169
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS
Sbjct: 120 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 179

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR
Sbjct: 180 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 239

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH
Sbjct: 240 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 299

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS
Sbjct: 300 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 359

Query: 301 LEF 304
           LEF
Sbjct: 360 LEF 362

[Close]

BLAST of CSPI06G29630.3 vs. NCBI nr
Match: gi|778718945|ref|XP_011657939.1| (PREDICTED: elongator complex protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 604.4 bits (1557), Expect = 1.1e-169
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE
Sbjct: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS
Sbjct: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR
Sbjct: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH
Sbjct: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS
Sbjct: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300

Query: 301 LEF 304
           LEF
Sbjct: 301 LEF 303

[Close]

BLAST of CSPI06G29630.3 vs. NCBI nr
Match: gi|659079925|ref|XP_008440520.1| (PREDICTED: elongator complex protein 4 [Cucumis melo])

HSP 1 Score: 586.3 bits (1510), Expect = 3.2e-164
Identity = 292/303 (96.37%), Postives = 296/303 (97.69%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNS+E
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSE 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS
Sbjct: 120 QEKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 179

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           SLS  RDRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNMEWEMLSFLR LKSMVR
Sbjct: 180 SLSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVR 239

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           SSNAVAVVTFPPSLL PSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH
Sbjct: 240 SSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 299

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KVAQ+NTQVPKILEATTFSIKLQKRRYLVLECLNQAP+D SSGSSYGSTGSCSGSSKTAS
Sbjct: 300 KVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKTAS 359

Query: 301 LEF 304
           LEF
Sbjct: 360 LEF 362

[Close]

BLAST of CSPI06G29630.3 vs. NCBI nr
Match: gi|595862862|ref|XP_007211476.1| (hypothetical protein PRUPE_ppa007585mg [Prunus persica])

HSP 1 Score: 479.6 bits (1233), Expect = 4.2e-132
Identity = 236/303 (77.89%), Postives = 266/303 (87.79%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPD 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFG++Q S ++   K+EFCN+FDLR+P +R F SGKH++C+SI DS 
Sbjct: 120 QEKGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSP 179

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           +L TL DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNMEWEMLSF+RSLK MVR
Sbjct: 180 NLVTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNMEWEMLSFVRSLKGMVR 239

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           SSNAVA VTFPP+LL PS  KRWQHMADTLLSV+AIPDEDKEL KLLTGYQDMVGLLNV 
Sbjct: 240 SSNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLNVQ 299

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KVA+LNTQVP ILEATT SIKL+KRR++VLECLNQAP+D SSGSSYG+TGSCS SSK+ +
Sbjct: 300 KVARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKSGT 359

Query: 301 LEF 304
           L+F
Sbjct: 360 LDF 362

[Close]

BLAST of CSPI06G29630.3 vs. NCBI nr
Match: gi|802546899|ref|XP_012087537.1| (PREDICTED: elongator complex protein 4 [Jatropha curcas])

HSP 1 Score: 479.2 bits (1232), Expect = 5.4e-132
Identity = 231/303 (76.24%), Postives = 267/303 (88.12%), Query Frame = 1


Query: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60
           MEDAEAPHHMLLLRNFMSQGLV +QPLLYASPS+DPRGFLGTLPSP +SKDDK R++  E
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVQNQPLLYASPSKDPRGFLGTLPSPSSSKDDKLRNHDAE 119

Query: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120
           QEKGLRIAWQYKKYFG++Q+S N  D+K EFCNDFDLR+P +RHF+SG+ V+C+S  DS 
Sbjct: 120 QEKGLRIAWQYKKYFGENQQSFNGKDTKQEFCNDFDLRKPLERHFYSGQRVDCISFKDSQ 179

Query: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180
           +L  L D C TFLSQ PRNDG+ISS GRIAIQSLCAPQC++SNMEW++LSF+RSLK M++
Sbjct: 180 NLVALHDHCTTFLSQFPRNDGSISSIGRIAIQSLCAPQCEYSNMEWDVLSFIRSLKCMLQ 239

Query: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLNVH 240
           S+NAVAV+TFP SLL     KRWQHMAD LLSV+AIPD+DKELAKLLTGYQDMVG LN+H
Sbjct: 240 SANAVAVITFPSSLLSEPICKRWQHMADILLSVKAIPDDDKELAKLLTGYQDMVGFLNIH 299

Query: 241 KVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKTAS 300
           KV + NTQVP ILEATTFSIKLQKRR+LVLECLNQAP+D SSGSSYG++ SCSGSSKT +
Sbjct: 300 KVVRFNTQVPLILEATTFSIKLQKRRFLVLECLNQAPIDGSSGSSYGTSSSCSGSSKTGT 359

Query: 301 LEF 304
           L+F
Sbjct: 360 LDF 362

The following BLAST results are available for this feature:

BLAST of CSPI06G29630.3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ELP4_ARATH	5.5e-108	65.35	Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1	[more]
ELP4_DICDI	4.9e-16	25.24	Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV...	[more]

BLAST of CSPI06G29630.3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLQ1_CUCSA	7.8e-170	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1	[more]
M5X0U1_PRUPE	2.9e-132	77.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1	[more]
A0A067L8R3_JATCU	3.8e-132	76.24	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01277 PE=4 SV=1	[more]
B9T5X5_RICCO	8.4e-132	75.99	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0339580 PE=4 SV=1	[more]
B9HSP5_POPTR	4.2e-131	75.33	Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1	[more]

BLAST of CSPI06G29630.3 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11220.2	2.1e-105	61.37	Paxneb protein-related	[more]

BLAST of CSPI06G29630.3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451375\|ref\|XP_004143437.1\|	1.1e-169	100.00	PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus]	[more]
gi\|778718945\|ref\|XP_011657939.1\|	1.1e-169	100.00	PREDICTED: elongator complex protein 4 isoform X2 [Cucumis sativus]	[more]
gi\|659079925\|ref\|XP_008440520.1\|	3.2e-164	96.37	PREDICTED: elongator complex protein 4 [Cucumis melo]	[more]
gi\|595862862\|ref\|XP_007211476.1\|	4.2e-132	77.89	hypothetical protein PRUPE_ppa007585mg [Prunus persica]	[more]
gi\|802546899\|ref\|XP_012087537.1\|	5.4e-132	76.24	PREDICTED: elongator complex protein 4 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008728	Elongator_complex_protein_4

Vocabulary: **Cellular Component**
Term	Definition
GO:0033588	Elongator holoenzyme complex

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0033588	Elongator holoenzyme complex
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G29630	CSPI06G29630	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.3	CSPI06G29630.3-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.3.utr3p1	CSPI06G29630.3.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.3.cds7	CSPI06G29630.3.cds7	CDS
CSPI06G29630.3.cds6	CSPI06G29630.3.cds6	CDS
CSPI06G29630.3.cds5	CSPI06G29630.3.cds5	CDS
CSPI06G29630.3.cds4	CSPI06G29630.3.cds4	CDS
CSPI06G29630.3.cds3	CSPI06G29630.3.cds3	CDS
CSPI06G29630.3.cds2	CSPI06G29630.3.cds2	CDS
CSPI06G29630.3.cds1	CSPI06G29630.3.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.3.utr5p1	CSPI06G29630.3.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008728	Elongator complex protein 4	PANTHER	PTHR12896	PAX6 NEIGHBOR PROTEIN PAXNEB	coord: 1..298 score: 1.7E
IPR008728	Elongator complex protein 4	PFAM	PF05625	PAXNEB	coord: 1..303 score: 3.9