CmaCh07G005820 (gene) Cucurbita maxima (Rimu)

NameCmaCh07G005820
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionElongator complex 4
LocationCma_Chr07 : 2516177 .. 2520252 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATTAACATACCTACGAGTTCTCGCTCCCGCCAACCTTGTAATCTATTAACGTCTTCGGCCTGGAGGGAAACACAATCCAGATCATTGCATTTGAGGTATGTTCTTCGTGAATCTTTGTGTAGAAACGGGCCATAACCAATCTTTGAATTTATTCCCCAATTTTGCTAGCTTTTTCTGGTGTTGGCTTGCTAAATTAATCTTCTTTTGTGTATTGCCGACCAAGTGTTCGATGAAATGTCGATATGAATTTATTGAAACCTGCGAGAACTTTTGGGACTGATTGAGTTTTTTTAGAGGTATACTTCAAAATGATGGAAGTTTTTTCGATCGTTTACATGAATTTCACTTGAAGCTATTGCCTTTTACACCCCATCCCCCACTTCGTTTCCATCAAACGTACGAATATCTATATGTATGCAAGTATAATTTCTTGTTCAACTTTTAGTTTTTAACTATCACGGATACTTCACATCTCTACATCATGTTTTGCCCTTATTCTGGCACCGTCCTTTTCTTCCTTTCCCAATTAGTTTTGTATTGTTAAGCGTCCGTATGTTTTAAGATGGTTAATTGCAGCTTTCAGGGTTTTCATTGACTTGAATAGACCATAGAGCTACATTTTATTGGACGATTTGCTCAAAACTGCAGAGTATTAACCCAGCTATGGAAGCTACGACAAAGCCTAGGACAAGCAGCTTCTCACGCAACCTTTCTTCTGCACATTCATCTCAGACGCCAGGACTTAAACATGGTCCCAATGGCACCACATTCATTTCATCCGGAATACCAGACCTTGACAGTACTTTCTGCATCATATTCATCAGTTCAAAATTGTTGGGAATTGAAATGTTAATTGAAATGTTGAAGACTTGTAATCTATACCCATGTTATTCATTTGGACTAGTCTTAATTTCTCCTTTTGTTTGGTTGCAGAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTAGTCTTGGTTATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCCCTTCTTTATGCTAGTCCATCTAGAGACCCAAGAGGATTCTTGGGTACTTTGCCAAGCCCAGGGACATCAAAAGATAATAAATCTCGTGACAGTTCTGCTGAACAGGTGTTCCACTTCTCATTAACTTTTTCAATTCTTTTGATTTTGGATTTGGATGCAAAGATATAAGATCTGGTTGAATTCATTTCAGGAGAAGGGCTTAAGGATTGCCTGGCAATATAAGAAGTATTTTGGCGAAAGTCAAGAGAACGTCAATGCCATTGGTAAACTTACTGAAACCTCAACCTAATAATTTTTTCCCGGAATTCAATCTCAATGAACAACAACCAATAATTTGTGTTGGTTGTGTGGTGTAACTTCTTGTCCATATTATGGTGAAGTTTTCAAGGAAAAAGTACATGTTTCACTCCAGTTTTCTGCAGTATATATCTTTAGTTCACGTTTATTGTATTTCTTCTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCAATGGCTCACTCTCCCTGACACAAGTTTAATATGGGTGCAATATTATTCTTATAGGGTTAATTATTTAATGCTTGTACAGATGGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAAGCCCTTTGACAGACATTTTTTCAGCGGGAAGCATGTGGAATGTGTTAGTTTACTAGATTCTTCTAGTCTCTCTACTACTCTTGATCGTTGCGCCACATTCCTATCACAAGTTCCAAGGTAATGTTTACCTCTACTTTTCCCTCTAGAATGTATCAGTTTCAATCATTGCATTAGTTTGTAAAGTATATTCAATTGAATTTATTGTAAAAGATGTCTAGCAACTATTCTCGTTTGATGTAACGAAGAAGTGCTAATCTGTTTTTGAGGTGGCTGGAGATGGAAGTAGTTGGATTGAGACCTTGGGTACAGATCCTTCTTTTATATTTGGAGAAAGTTTGTTAAACAGAAATAGGATCTTCTTATTCAGTGTAGAGGTTCTTTGGATTTGGAAACATAATTAGGCACCAAATTGTATCATGTAGCGTTTTCATGAAATGTAGTTTTCGCCGATGGTAACTACCTGAGTTCATTTTCTACCTCTAAATGCTAGAGAAGAACTTCAGGCCAATCTGAAATGAATTATTCTTTATTTCATCAATGGTTTATCCCATTTTCAGATTTGGTATTCAAGAAGATTTTGCTAGATTGTGAGAGGTGTGGAATTTATCTGATATAATGCCTGAATTAGGGATTGAATTCATTATTTTATTTATTAAATGTGAATATGTGAAGGATATTCATAATGTGGGTGGAGGACTTGTCCTTTGTCCATCTACATTGTTGTATTATTTGTTGAGGTCCTCTTTCATCTGTACTGCTCTGCAACCTTGTGCACTCTCTTATTTTTCCATATGAAAATTTTGTTTTCAAAAGACAAGAAACAGGAAAAGAAAATGTGAATCCGTCAATTGGGTAGCCTGAAGTTCATTTTAATTTTCGTTTTTTACATATTTGAATGTGTTCATTCTGTTCCTTTATCTGGATGATCATCTTCCTTTGTTGCTGACAATATATTGTCCTTACTTTGATGTCACATGACAATTCCAGAAATGACGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCGTTATGTGCTCCGCAATGTGATCATTCCAACATGGTTAGTCACAAATTGAATTTACGCTCTTTGGTTACCATTATAATGATTGTTTGCTCCATTATACTTGATAAATCTTTGTGCTCACTTTCCTCCATAAAAGATTTGAAACGGGGTATTGGATTAAAAAAAACCTTCGTCTGCAATCTAAAATTTAAAACTAGTGTTTTTCTTTTTTTCTCGATTATTTGAGCCCTCATTGTAAAGCTGGAGCTGCAGGAGTGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGCTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTTCTCCTTCCCTTCTCTTGCCATCCTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAAGGCAATCCCAGGTTTAGACGTAGCATCTCAATTTGCCTTATTGTCTCTTGCATCAATGAGATATTGACTAAAACTATTGCAGATGAGGATAAGGAATTAGCAAATCTCCTCACTGGTTACCAAGACATGGTTGGCCTTCTCAATATTCATAAAGTGGCTCAAATCAATACGCAGGTATGCATACCTGTAACTTAGGAATGGACCCAACGGTGAAATGCTGCTTCTGCAAAATTTTCTTCCAATGCTTGCTACTTCACTGTTCTGCATATTTCTATTGGTTCTGGTCCATACTTCATTCATGTGCCATGATTGAGTGCAATATTTGCTAGTAGCTCTGAATGGTTATTGACTCTTAAAGCCGTAGATGGCGTTCTAATGTATTTATTTCTTGTTGGGGCTGATATGTATTATTCTTTGGGTTGGTTTAATTTCCTATATGACTGATATCTCCTTTTTAGCTGGCTTTTACTCATGCTCATGGATCCAAAATTTGACTGCAGGTTCCAAGAATTCTTGAGGCGACTACATTCTCTATAAAGTTGCAAAAGAGAAGGTTTTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGGTTCAACCGGGAGCTCATATGGCTCTACTGGGAGTTGTTCTGGGTCCTCCAAGGCAGGTTCTCTCGACTTTTAGTTTCTAAATGATATTAGCATAAGGAATTTGAGAGTGGTATTTTTGAAGTTAAATTTGAAGTTTAGGATGGCATTGATTGTTGAATGTTTATATTTTCCCCATCTCTTTGGCCTTCATTCCTGTATTATGAACATTCCTTTCAAGAGTAAAAGAAATGGATAATTCTTTGAACATCA

mRNA sequence

ATGCTATTAACATACCTACGAGTTCTCGCTCCCGCCAACCTTAGTATTAACCCAGCTATGGAAGCTACGACAAAGCCTAGGACAAGCAGCTTCTCACGCAACCTTTCTTCTGCACATTCATCTCAGACGCCAGGACTTAAACATGGTCCCAATGGCACCACATTCATTTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTAGTCTTGGTTATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCCCTTCTTTATGCTAGTCCATCTAGAGACCCAAGAGGATTCTTGGGTACTTTGCCAAGCCCAGGGACATCAAAAGATAATAAATCTCGTGACAGTTCTGCTGAACAGGAGAAGGGCTTAAGGATTGCCTGGCAATATAAGAAGTATTTTGGCGAAAGTCAAGAGAACGTCAATGCCATTGATGGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAAGCCCTTTGACAGACATTTTTTCAGCGGGAAGCATGTGGAATGTGTTAGTTTACTAGATTCTTCTAGTCTCTCTACTACTCTTGATCGTTGCGCCACATTCCTATCACAAGTTCCAAGAAATGACGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCGTTATGTGCTCCGCAATGTGATCATTCCAACATGCTGGAGCTGCAGGAGTGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGCTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTTCTCCTTCCCTTCTCTTGCCATCCTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAAGGCAATCCCAGATGAGGATAAGGAATTAGCAAATCTCCTCACTGGTTACCAAGACATGGTTGGCCTTCTCAATATTCATAAAGTGGCTCAAATCAATACGCAGGTTCCAAGAATTCTTGAGGCGACTACATTCTCTATAAAGTTGCAAAAGAGAAGGTTTTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGGTTCAACCGGGAGCTCATATGGCTCTACTGGGAGTTGTTCTGGGTCCTCCAAGGCAGGTTCTCTCGACTTTTAGTTTCTAAATGATATTAGCATAAGGAATTTGAGAGTGGTATTTTTGAAGTTAAATTTGAAGTTTAGGATGGCATTGATTGTTGAATGTTTATATTTTCCCCATCTCTTTGGCCTTCATTCCTGTATTATGAACATTCCTTTCAAGAGTAAAAGAAATGGATAATTCTTTGAACATCA

Coding sequence (CDS)

ATGCTATTAACATACCTACGAGTTCTCGCTCCCGCCAACCTTAGTATTAACCCAGCTATGGAAGCTACGACAAAGCCTAGGACAAGCAGCTTCTCACGCAACCTTTCTTCTGCACATTCATCTCAGACGCCAGGACTTAAACATGGTCCCAATGGCACCACATTCATTTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTAGTCTTGGTTATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCACAACCAACCCCTTCTTTATGCTAGTCCATCTAGAGACCCAAGAGGATTCTTGGGTACTTTGCCAAGCCCAGGGACATCAAAAGATAATAAATCTCGTGACAGTTCTGCTGAACAGGAGAAGGGCTTAAGGATTGCCTGGCAATATAAGAAGTATTTTGGCGAAAGTCAAGAGAACGTCAATGCCATTGATGGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAAGCCCTTTGACAGACATTTTTTCAGCGGGAAGCATGTGGAATGTGTTAGTTTACTAGATTCTTCTAGTCTCTCTACTACTCTTGATCGTTGCGCCACATTCCTATCACAAGTTCCAAGAAATGACGGCAATATATCCTCTGCTGGCCGTATTGCCATTCAATCGTTATGTGCTCCGCAATGTGATCATTCCAACATGCTGGAGCTGCAGGAGTGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGCTAAGGTCCTCAAATGCAGTAGCTGTAGTGACGTTTTCTCCTTCCCTTCTCTTGCCATCCTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAAGGCAATCCCAGATGAGGATAAGGAATTAGCAAATCTCCTCACTGGTTACCAAGACATGGTTGGCCTTCTCAATATTCATAAAGTGGCTCAAATCAATACGCAGGTTCCAAGAATTCTTGAGGCGACTACATTCTCTATAAAGTTGCAAAAGAGAAGGTTTTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGGTTCAACCGGGAGCTCATATGGCTCTACTGGGAGTTGTTCTGGGTCCTCCAAGGCAGGTTCTCTCGACTTTTAG

Protein sequence

MLLTYLRVLAPANLSINPAMEATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQEKGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSLSTTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSMLRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLNIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKAGSLDF
BLAST of CmaCh07G005820 vs. Swiss-Prot
Match: ELP4_ARATH (Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 4.2e-129
Identity = 247/367 (67.30%), Postives = 292/367 (79.56%), Query Frame = 1

Query: 20  MEATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 79
           M A     +SSFSRN+S   S Q PGLK GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 80  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAE 139
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK++K      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 140 QEKGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSS 199
           Q + LRIAWQY+KY  E+Q+N  AID   ++ NDFD+RKP +R F SG+ ++CVSLLDSS
Sbjct: 121 QGESLRIAWQYRKYL-ENQKN--AID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 200 SLSTTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLK 259
            LS   D CATFLS+ PRN  NI+S GRIAIQS C+P C++S     +E +MLSF+R LK
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSE----KESDMLSFIRLLK 240

Query: 260 SMLRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGL 319
           SML  SNAVA+VTF PSLL PS SKR QHMADTLLS+KAIPD DKEL  LLTGY+D+ G 
Sbjct: 241 SMLMVSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPDGDKELEKLLTGYKDINGF 300

Query: 320 LNIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSS 379
           LNIHKVA+INTQVP ILEA TFS+ L+KRRFL LECLNQAPVDGS+G+SYG++GSC  SS
Sbjct: 301 LNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPVDGSSGTSYGTSGSC--SS 355

Query: 380 KAGSLDF 387
           K+G+LDF
Sbjct: 361 KSGALDF 355

BLAST of CmaCh07G005820 vs. Swiss-Prot
Match: ELP4_DICDI (Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20
Identity = 94/387 (24.29%), Postives = 177/387 (45.74%), Query Frame = 1

Query: 23  TTKPRTSSFSRNLSSAHSSQTPGLKHGPNG--------TTFISSGIPDLDKILCGGFPLG 82
           TT   +S  + N S+  ++ T   K  PNG            S+G+ DLD I+ GG P+G
Sbjct: 20  TTTTGSSLPTNNTSTTTTTTTTAAKKLPNGCKISIKNSNLLTSTGLTDLDDIIGGGIPIG 79

Query: 83  SLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS-PSRDPRGFLGTLPSPGTSKDN-- 142
           S++++ ED  + ++M LL+ F+++G++  Q + ++S    DP   L  LP+  T ++   
Sbjct: 80  SILMIEEDINSSYYMFLLKYFLAEGVLQQQGVFFSSLIGIDPFEILNKLPARITKEEEIE 139

Query: 143 --------------KSRDSSAEQEKGLRIAWQYKKYFG------ESQENVNAIDGKYEFC 202
                          + +++ +    L+IAW+Y++Y        + Q++ + I  +  FC
Sbjct: 140 ADKNDTTNNINTNINTNNNNKQPTDELKIAWRYQQYVSNELSKQQQQQSASTIMNQ-TFC 199

Query: 203 NDFDLRKPFDRHFFSGKHVECVSLLDSSSLSTTLDRCATFL---------SQVPRNDGNI 262
           + +D  +  +    + + +  +S    S    T      FL         ++    + + 
Sbjct: 200 HSYDFTRKMNVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLEIQNLVYKYNKEAAMNPDQ 259

Query: 263 SSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSMLRSSNAVAVVTFSPSLLLPSF 322
           +   R+ IQS  +P      +    E  ++ FL +LK +LRSS A  V++    +   +F
Sbjct: 260 TRVLRLCIQSFSSP------LWSNDEEGVIEFLHALKGLLRSSVATCVISVPTYIYSGAF 319

Query: 323 SKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLNIHKVAQINT-QVPRILEATTF 369
            K+  H+ DT++S+ +      E       Y   +GL NI K+A++NT  +    +  TF
Sbjct: 320 VKKIAHLCDTVVSINSFSGLGGETPEQFAEY---LGLFNIRKIARLNTLSLSFHPDMLTF 379

BLAST of CmaCh07G005820 vs. Swiss-Prot
Match: ELP4_MOUSE (Elongator complex protein 4 OS=Mus musculus GN=Elp4 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 86/342 (25.15%), Postives = 155/342 (45.32%), Query Frame = 1

Query: 51  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 110
           NG   +S+G+P LD++L GG  +G+L+L+ ED    +  LL + FM++G+++   LL AS
Sbjct: 57  NGQLLVSTGLPALDQLLGGGLAVGTLLLIEEDKYNIYSPLLFKYFMAEGIINGHTLLVAS 116

Query: 111 PSRDPRGFLGTLPSPGTSKDNKSR------DSSAEQEKGLRIAWQYKKYFGESQENVNAI 170
              +P   L  LP+P    ++K          + E    ++IAW+Y+       E     
Sbjct: 117 AKENPAKILQELPAPLLDDNSKKELEDVHSAKTPEPNVNMKIAWRYQ--LQPKMEVGPVS 176

Query: 171 DGKYEFCNDFDLRKPFD-------RHFFSGKHVECVSLLDSSSLSTTLDRCATFLSQVPR 230
             ++    D   R P++         FF  +H+      +S  LS    R   F+ +   
Sbjct: 177 SSRFGHYYDLSKRIPWELLQSSKWHGFFLPEHISPDLKGESCFLSCGYMRLLEFIQKSVY 236

Query: 231 NDG--------NISSAGRIAIQSL----------CAPQCDHSNMLELQEWEMLSFLRSLK 290
            +G           +  RI IQ+L          C   CD+++ L         FL  L+
Sbjct: 237 AEGFDGANPQKKQKNILRIGIQNLGSPLWGDDICCKENCDNNHRL-------TKFLYILR 296

Query: 291 SMLRSSNAVAVVTFSPSLLL-PSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVG 350
            +LRSS +  ++T    L+   S + R ++++DT++ +++    ++E   L   Y+D  G
Sbjct: 297 GLLRSSLSACIITMPAHLVQNKSITTRVRNLSDTVVGLESFIGSERETNPL---YKDYHG 356

Query: 351 LLNIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAP 361
           L++I K+ ++N       +    + KL KR+   +E L+  P
Sbjct: 357 LIHIRKIPRLNNLTCDESDVKDLAFKL-KRKLFTIERLHLPP 385

BLAST of CmaCh07G005820 vs. Swiss-Prot
Match: ELP4_BOVIN (Elongator complex protein 4 OS=Bos taurus GN=ELP4 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.7e-18
Identity = 82/334 (24.55%), Postives = 148/334 (44.31%), Query Frame = 1

Query: 51  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 110
           NG   +S+G+P LD++L GG  +G+++L+ ED    +  LL + F+++G+V    LL AS
Sbjct: 58  NGQLLVSTGLPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFKYFLAEGIVSGHALLVAS 117

Query: 111 PSRDPRGFLGTLPSPGTSKDNKSR------DSSAEQEKGLRIAWQYKKYFGESQENVNAI 170
              DP   L  LP+P      K            E +  ++IAW+Y+       E     
Sbjct: 118 AKEDPADILQKLPAPLIDDSYKKECDEDVCSHKMEPDIKMKIAWRYQLL--PKMEAGPVS 177

Query: 171 DGKYEFCNDFDLRKPFD-------RHFFSGKHVECVSLLDSSSLSTTLDRCATFLSQVPR 230
             ++    D   R P +         FF  + +     ++S SL+    +   F+  +  
Sbjct: 178 SSRFGHYYDISKRIPQELIETSKWHGFFLPEKISSAFNVESCSLTPGYMKLLQFIQNIIY 237

Query: 231 NDGNISSAG--------RIAIQSL----------CAPQCDHSNMLELQEWEMLSFLRSLK 290
            +G   S          RI IQ+L          C   CD S+ L         FL  L+
Sbjct: 238 KEGFDGSNPQKKQKNILRIGIQNLGSPLWGDDICCTENCDTSHSL-------TKFLYILR 297

Query: 291 SMLRSSNAVAVVTFSPSLLL-PSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVG 350
            +LR+S +  ++T    L+   +   R  +++DT++ +++    +KE   L   Y+D  G
Sbjct: 298 GLLRTSLSACIITMPTHLIQNKAVIARVTNLSDTVVGLESFIGSEKETNPL---YKDYHG 357

Query: 351 LLNIHKVAQINTQVPRILEATTFSIKLQKRRFLV 353
           L++I ++ ++N  +  I +    + KL+K+ F +
Sbjct: 358 LIHIRQIPRLNNLIYDISDVKDLAFKLKKKLFTI 379

BLAST of CmaCh07G005820 vs. Swiss-Prot
Match: ELP4_XENLA (Elongator complex protein 4 OS=Xenopus laevis GN=elp4 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.6e-17
Identity = 93/360 (25.83%), Postives = 171/360 (47.50%), Query Frame = 1

Query: 51  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYAS 110
           NG   +S+G+P LD IL GG  +G+L+L+ ED    +  LLL+ F+++G+V    +  AS
Sbjct: 42  NGQLLVSTGVPSLDHILGGGLAVGTLLLIEEDTYGTYSHLLLKYFLAEGVVSGHEVFVAS 101

Query: 111 PSRDPRGFLGTLPSPGTSK------DNKSRDSSA---EQEKGLRIAWQYKKYFGESQENV 170
            + DP   L  LPSP T +        +++D+S    + ++ ++IAW+Y     ++   V
Sbjct: 102 ANDDPTETLQDLPSPLTDEVPRQNDPKRTKDTSGPADDSQEMMKIAWRY-----QNLPKV 161

Query: 171 NAID-GKYEFCNDFDLRKPF-------DRHFFSGKHVECVSLLDSSSLSTTLDRCATFLS 230
             +      F + +DL K            F+  + +      + S ++   ++    + 
Sbjct: 162 ETLPISSSRFGHYYDLSKTMPPEMSAKSHRFYLPRIMSANQKQNVSEVTCNYNQLLESIQ 221

Query: 231 QVPRNDGNISSAG--------RIAIQS----LCAPQCDHSNMLELQEWEMLSFLRSLKSM 290
           +V   +G   S          R+ I+S    L A         E Q   +  FL  L+ +
Sbjct: 222 RVVHQEGYDGSNPQKRPKTILRLGIESLGSVLWADDICSQERPENQH-SLTRFLYGLRGL 281

Query: 291 LRSSNAVAVVTFSPSLLL-PSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLL 350
           LR+S +V V+T    L+   + + R + ++DT++ +++    + E AN L  Y+D  GLL
Sbjct: 282 LRTSLSVCVITVPTYLIQNKAITTRLRSLSDTVVGLESFIGSEME-ANPL--YKDYHGLL 341

Query: 351 NIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSK 381
           ++H++ ++N+ +    +    + KL KR+   +E L+  P D S   S  S    +GS+K
Sbjct: 342 HVHQIPRLNSLISDGSDTKDLAFKL-KRKIFAIERLH-LPPDLSDTVSRSSKQDLAGSAK 390

BLAST of CmaCh07G005820 vs. TrEMBL
Match: A0A0A0KLQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 7.6e-186
Identity = 329/365 (90.14%), Postives = 345/365 (94.52%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           A TKPRTSSFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 2   AATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPG SKD+KSRD+S EQE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 201
           KGLRIAWQYKKYFG+ QE+ NAID KYEFCNDFDLR+PFDRHFFSGKHVECVS+LDSSSL
Sbjct: 122 KGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181

Query: 202 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSM 261
           ST  DRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNM    EWEMLSFLRSLKSM
Sbjct: 182 STLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNM----EWEMLSFLRSLKSM 241

Query: 262 LRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 321
           +RSSNAVAVVTF PSLLLPSFSKRWQHMADTLLSV+AIPDEDKELA LLTGYQDMVGLLN
Sbjct: 242 VRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLN 301

Query: 322 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 381
           +HKVAQ+NTQVP+ILEATTFSIKLQKRR+LVLECLNQAPVD S+GSSYGSTGSCSGSSK 
Sbjct: 302 VHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKT 361

Query: 382 GSLDF 387
            SL+F
Sbjct: 362 ASLEF 362

BLAST of CmaCh07G005820 vs. TrEMBL
Match: M5X0U1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 2.1e-156
Identity = 282/365 (77.26%), Postives = 317/365 (86.85%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           + TK RTSSFSRN +SA+SSQ PGLKHGPNGT FISSGIPDLDKIL GGF LGSLV+VME
Sbjct: 2   SVTKTRTSSFSRNFASANSSQIPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPS+DPR FLGTLPSP   KD+KS     +QE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 201
           KGLRIAWQYKKYFGE+Q + ++  GK+EFCN+FDLRKP +R F SGKH++C+S+ DS +L
Sbjct: 122 KGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPNL 181

Query: 202 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSM 261
            T  DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNM    EWEMLSF+RSLK M
Sbjct: 182 VTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNM----EWEMLSFVRSLKGM 241

Query: 262 LRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 321
           +RSSNAVA VTF P+LL PS  KRWQHMADTLLSVKAIPDEDKEL  LLTGYQDMVGLLN
Sbjct: 242 VRSSNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLN 301

Query: 322 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 381
           + KVA++NTQVP ILEATT SIKL+KRRF+VLECLNQAP+DGS+GSSYG+TGSCS SSK+
Sbjct: 302 VQKVARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKS 361

Query: 382 GSLDF 387
           G+LDF
Sbjct: 362 GTLDF 362

BLAST of CmaCh07G005820 vs. TrEMBL
Match: A0A061FL38_THECC (Elongator complex protein 4 isoform 2 OS=Theobroma cacao GN=TCM_042519 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 2.6e-154
Identity = 285/366 (77.87%), Postives = 315/366 (86.07%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           A  K RTSSFSRNLS+A  SQ PGLK GPNGT F+SSGI DLDKIL GGFPLGSLV+VME
Sbjct: 2   AAAKTRTSSFSRNLSAAAPSQGPGLKCGPNGTVFLSSGISDLDKILGGGFPLGSLVMVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASP+ DPRGFLGTLPSP  SKD KS     +QE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPAIDPRGFLGTLPSPAASKDEKSHKHDPDQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAI-DGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSS 201
           KGLRIAWQYKKYFGESQ N +   DGK+E+ N+FDLRKP +RHF S + V+CVS+ DS +
Sbjct: 122 KGLRIAWQYKKYFGESQLNFDGQRDGKHEYSNEFDLRKPLERHFLSAQRVDCVSIQDSPN 181

Query: 202 LSTTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKS 261
           LS   DR ATFLSQ PRNDG+IS AGRIAIQS  APQC +SNM    EW+MLSF+RSLKS
Sbjct: 182 LSALQDRSATFLSQYPRNDGSISCAGRIAIQSFSAPQCAYSNM----EWDMLSFIRSLKS 241

Query: 262 MLRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLL 321
           M+RSSNAVA++TF PSLL PSF KRWQHMADTLLSVKAIPDEDKEL+ LLTGYQDMVG L
Sbjct: 242 MVRSSNAVALITFPPSLLSPSFCKRWQHMADTLLSVKAIPDEDKELSQLLTGYQDMVGFL 301

Query: 322 NIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSK 381
           N+HKVA+INTQVP IL+ATTFSIKLQKRRFLVLECLNQAPVDGS+G+SYG++GSCSGSSK
Sbjct: 302 NVHKVARINTQVPVILDATTFSIKLQKRRFLVLECLNQAPVDGSSGTSYGTSGSCSGSSK 361

Query: 382 AGSLDF 387
            G+LDF
Sbjct: 362 TGNLDF 363

BLAST of CmaCh07G005820 vs. TrEMBL
Match: B9HSP5_POPTR (Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 3.8e-153
Identity = 272/366 (74.32%), Postives = 316/366 (86.34%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           A TK R SSFSRN+S+  + Q PG+K GPNGT F+SSGIPDLDKIL GGFPLGSLV++ME
Sbjct: 2   AATKTRISSFSRNISAVSAPQLPGIKCGPNGTFFVSSGIPDLDKILGGGFPLGSLVMIME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLV NQPLLYASP++DPRGFLGTLP P +SKD+KSR+   EQE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAI-DGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSS 201
           KGLRIAWQYKKYF E+Q+N++   D   EFCNDFDLRKP ++HF+SG+ V+CVS+ DS +
Sbjct: 122 KGLRIAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKDSPN 181

Query: 202 LSTTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKS 261
           L+T  DRCATFL+Q PRNDG+ S  GRIAIQSLCAPQC+ S M    +W+MLSF+RSLKS
Sbjct: 182 LATLHDRCATFLAQFPRNDGSFSCMGRIAIQSLCAPQCELSKM----DWDMLSFIRSLKS 241

Query: 262 MLRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLL 321
           MLRS+NAVA++TF  SLL PSF KRWQHMAD LLSVKAIPDEDKEL  LLTGYQDMVG L
Sbjct: 242 MLRSANAVAIITFPSSLLSPSFCKRWQHMADVLLSVKAIPDEDKELGKLLTGYQDMVGFL 301

Query: 322 NIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSK 381
           N+HK+A+INTQVP ILEATTFSIKL KRRFLVLECLNQAP+DGS+G+SYG++G CSGSS+
Sbjct: 302 NVHKIARINTQVPMILEATTFSIKLHKRRFLVLECLNQAPIDGSSGTSYGTSGGCSGSSR 361

Query: 382 AGSLDF 387
           +G+LDF
Sbjct: 362 SGALDF 363

BLAST of CmaCh07G005820 vs. TrEMBL
Match: V4WEH9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008278mg PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 4.9e-153
Identity = 279/373 (74.80%), Postives = 323/373 (86.60%), Query Frame = 1

Query: 15  SINPAMEATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLG 74
           S++ AM ATTKPR SSFSRNLS+  SSQTPG+K GPNGT F+SSGI DLDKIL GGFPLG
Sbjct: 82  SVDAAM-ATTKPRLSSFSRNLSAVSSSQTPGVKCGPNGTMFVSSGIADLDKILGGGFPLG 141

Query: 75  SLVLVMEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSR 134
           SLV+VMEDAEAPHHMLLLRNFMSQGLVH QPLLYASPS+DPRGFLGTLPSP + K +KSR
Sbjct: 142 SLVMVMEDAEAPHHMLLLRNFMSQGLVHGQPLLYASPSKDPRGFLGTLPSPASLKHDKSR 201

Query: 135 DSSAEQEKGLRIAWQYKKYFGESQENVNA-IDGKYEFCNDFDLRKPFDRHFFSGKHVECV 194
           D  +EQEKGLRIAWQYKKY GE+Q N ++  D K ++CN+FDLRKP +RH+F+ + V CV
Sbjct: 202 DRESEQEKGLRIAWQYKKYMGENQPNFDSHRDNKQDYCNEFDLRKPLERHYFTRQRVNCV 261

Query: 195 SLLDSSSLSTTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLS 254
            + DS +L+   + CA+FL+Q  RNDG+ + AGRIAIQSLCAPQC+HSNM    +WEMLS
Sbjct: 262 GIQDSKNLAALQEHCASFLAQHQRNDGSCALAGRIAIQSLCAPQCEHSNM----DWEMLS 321

Query: 255 FLRSLKSMLRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGY 314
           F++SLK M+RSSNAV V+TF PSLL  S +KRWQHMADTLLSV AIPDEDKELA LL+GY
Sbjct: 322 FIKSLKGMVRSSNAVVVITFPPSLLSLSSTKRWQHMADTLLSVAAIPDEDKELAKLLSGY 381

Query: 315 QDMVGLLNIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTG 374
           QDMVGLLN+H+VA++NTQVP ILEATTFSIKLQKRRFLVLECLNQAPVDGS+GSSYG++G
Sbjct: 382 QDMVGLLNVHRVARLNTQVPLILEATTFSIKLQKRRFLVLECLNQAPVDGSSGSSYGTSG 441

Query: 375 SCSGSSKAGSLDF 387
           SCSGSSKAG+LDF
Sbjct: 442 SCSGSSKAGTLDF 449

BLAST of CmaCh07G005820 vs. TAIR10
Match: AT3G11220.2 (AT3G11220.2 Paxneb protein-related)

HSP 1 Score: 449.9 bits (1156), Expect = 1.6e-126
Identity = 246/385 (63.90%), Postives = 292/385 (75.84%), Query Frame = 1

Query: 20  MEATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 79
           M A     +SSFSRN+S   S Q PGLK GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 80  MEDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAE 139
           MED EAPHHM LLR +MSQGLV+NQPLLYASPS+DP+GFLGTLP P +SK++K      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 140 QEKGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSS 199
           Q + LRIAWQY+KY  E+Q+N  AID   ++ NDFD+RKP +R F SG+ ++CVSLLDSS
Sbjct: 121 QGESLRIAWQYRKYL-ENQKN--AID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 200 SLSTTLDRCATFLSQVP------------------RNDGNISSAGRIAIQSLCAPQCDHS 259
            LS   D CATFLS+ P                  +N  NI+S GRIAIQS C+P C++S
Sbjct: 181 DLSIAQDHCATFLSKFPSKFCSSSILFTSLLYFQAQNSSNIASIGRIAIQSFCSPLCEYS 240

Query: 260 NMLELQEWEMLSFLRSLKSMLRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPD 319
                +E +MLSF+R LKSML  SNAVA+VTF PSLL PS SKR QHMADTLLS+KAIPD
Sbjct: 241 E----KESDMLSFIRLLKSMLMVSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIPD 300

Query: 320 EDKELANLLTGYQDMVGLLNIHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPV 379
            DKEL  LLTGY+D+ G LNIHKVA+INTQVP ILEA TFS+ L+KRRFL LECLNQAPV
Sbjct: 301 GDKELEKLLTGYKDINGFLNIHKVARINTQVPVILEAKTFSMSLKKRRFLALECLNQAPV 360

Query: 380 DGSTGSSYGSTGSCSGSSKAGSLDF 387
           DGS+G+SYG++GSC  SSK+G+LDF
Sbjct: 361 DGSSGTSYGTSGSC--SSKSGALDF 373

BLAST of CmaCh07G005820 vs. NCBI nr
Match: gi|449451375|ref|XP_004143437.1| (PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 657.9 bits (1696), Expect = 1.1e-185
Identity = 329/365 (90.14%), Postives = 345/365 (94.52%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           A TKPRTSSFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 2   AATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPG SKD+KSRD+S EQE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 201
           KGLRIAWQYKKYFG+ QE+ NAID KYEFCNDFDLR+PFDRHFFSGKHVECVS+LDSSSL
Sbjct: 122 KGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181

Query: 202 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSM 261
           ST  DRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNM    EWEMLSFLRSLKSM
Sbjct: 182 STLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNM----EWEMLSFLRSLKSM 241

Query: 262 LRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 321
           +RSSNAVAVVTF PSLLLPSFSKRWQHMADTLLSV+AIPDEDKELA LLTGYQDMVGLLN
Sbjct: 242 VRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLN 301

Query: 322 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 381
           +HKVAQ+NTQVP+ILEATTFSIKLQKRR+LVLECLNQAPVD S+GSSYGSTGSCSGSSK 
Sbjct: 302 VHKVAQLNTQVPKILEATTFSIKLQKRRYLVLECLNQAPVDASSGSSYGSTGSCSGSSKT 361

Query: 382 GSLDF 387
            SL+F
Sbjct: 362 ASLEF 362

BLAST of CmaCh07G005820 vs. NCBI nr
Match: gi|659079925|ref|XP_008440520.1| (PREDICTED: elongator complex protein 4 [Cucumis melo])

HSP 1 Score: 652.1 bits (1681), Expect = 5.9e-184
Identity = 327/365 (89.59%), Postives = 343/365 (93.97%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           A TKPRT SFSRN SSAHSS+TPG KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME
Sbjct: 2   AATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPG SKD+KSRD+S+EQE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 201
           KGLRIAWQYKKYFG+ QE+ NAID KYEFCNDFDLR+PFDRHFFSGKHVECVS+LDSSSL
Sbjct: 122 KGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSSL 181

Query: 202 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSM 261
           S   DRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNM    EWEMLSFLR LKSM
Sbjct: 182 SNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNM----EWEMLSFLRYLKSM 241

Query: 262 LRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 321
           +RSSNAVAVVTF PSLL PSFSKRWQHMADTLLSV+AIPDEDKELA LLTGYQDMVGLLN
Sbjct: 242 VRSSNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIPDEDKELAKLLTGYQDMVGLLN 301

Query: 322 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 381
           +HKVAQINTQVP+ILEATTFSIKLQKRR+LVLECLNQAP+D S+GSSYGSTGSCSGSSK 
Sbjct: 302 VHKVAQINTQVPKILEATTFSIKLQKRRYLVLECLNQAPIDVSSGSSYGSTGSCSGSSKT 361

Query: 382 GSLDF 387
            SL+F
Sbjct: 362 ASLEF 362

BLAST of CmaCh07G005820 vs. NCBI nr
Match: gi|595862862|ref|XP_007211476.1| (hypothetical protein PRUPE_ppa007585mg [Prunus persica])

HSP 1 Score: 560.1 bits (1442), Expect = 3.1e-156
Identity = 282/365 (77.26%), Postives = 317/365 (86.85%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           + TK RTSSFSRN +SA+SSQ PGLKHGPNGT FISSGIPDLDKIL GGF LGSLV+VME
Sbjct: 2   SVTKTRTSSFSRNFASANSSQIPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPS+DPR FLGTLPSP   KD+KS     +QE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 201
           KGLRIAWQYKKYFGE+Q + ++  GK+EFCN+FDLRKP +R F SGKH++C+S+ DS +L
Sbjct: 122 KGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPNL 181

Query: 202 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSM 261
            T  DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNM    EWEMLSF+RSLK M
Sbjct: 182 VTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNM----EWEMLSFVRSLKGM 241

Query: 262 LRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 321
           +RSSNAVA VTF P+LL PS  KRWQHMADTLLSVKAIPDEDKEL  LLTGYQDMVGLLN
Sbjct: 242 VRSSNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLN 301

Query: 322 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 381
           + KVA++NTQVP ILEATT SIKL+KRRF+VLECLNQAP+DGS+GSSYG+TGSCS SSK+
Sbjct: 302 VQKVARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKS 361

Query: 382 GSLDF 387
           G+LDF
Sbjct: 362 GTLDF 362

BLAST of CmaCh07G005820 vs. NCBI nr
Match: gi|764519288|ref|XP_011468400.1| (PREDICTED: elongator complex protein 4-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 556.6 bits (1433), Expect = 3.4e-155
Identity = 285/365 (78.08%), Postives = 312/365 (85.48%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           A TK RTSSFSRN S A S Q PGLKHGPNGT F+SSGIPDLDKIL GGF LGSLV+VME
Sbjct: 2   AATKTRTSSFSRNFSGASSPQIPGLKHGPNGTMFVSSGIPDLDKILGGGFALGSLVMVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVHNQ LLYASP++DPR FLGTLPSP   KD KS     +QE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHNQHLLYASPAKDPRQFLGTLPSPAVPKDEKSSHRDPDQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 201
           KGLRIAWQYKKYFGE+Q+  ++ +GK+EFCN+FDLRKP +R F +GK +EC S+LDS +L
Sbjct: 122 KGLRIAWQYKKYFGENQQGFDSQNGKHEFCNNFDLRKPLERQFLTGKLIECASILDSPNL 181

Query: 202 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSM 261
            T  DRCATFLSQ PRND NIS  GRIAIQS CAPQC +SN+    EW+MLS LRSLKSM
Sbjct: 182 VTFHDRCATFLSQFPRNDSNISCVGRIAIQSFCAPQCGYSNL----EWDMLSLLRSLKSM 241

Query: 262 LRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 321
           LRSSNAVAVVTF PSLL  S S RWQH+ADTLLSVKA+PDEDKELA LLTGYQDMVGLLN
Sbjct: 242 LRSSNAVAVVTFLPSLLSSSSSTRWQHIADTLLSVKALPDEDKELATLLTGYQDMVGLLN 301

Query: 322 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 381
           + KVAQINTQVP IL+ATTFSIKLQKRRFLVLECLNQAPVDGS+GSSYG++GSCSGSSK 
Sbjct: 302 VQKVAQINTQVPVILDATTFSIKLQKRRFLVLECLNQAPVDGSSGSSYGTSGSCSGSSKT 361

Query: 382 GSLDF 387
           GSLDF
Sbjct: 362 GSLDF 362

BLAST of CmaCh07G005820 vs. NCBI nr
Match: gi|645234609|ref|XP_008223887.1| (PREDICTED: elongator complex protein 4 isoform X1 [Prunus mume])

HSP 1 Score: 556.2 bits (1432), Expect = 4.4e-155
Identity = 280/365 (76.71%), Postives = 317/365 (86.85%), Query Frame = 1

Query: 22  ATTKPRTSSFSRNLSSAHSSQTPGLKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVME 81
           + TK RTSSFSRN +SA+SSQ PGLKHGPNGT FISSGIPDLDKIL GGF LGSLV+VME
Sbjct: 2   SATKTRTSSFSRNFASANSSQIPGLKHGPNGTVFISSGIPDLDKILGGGFSLGSLVMVME 61

Query: 82  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGTSKDNKSRDSSAEQE 141
           DAEAPHHMLLLRNFMSQGLVHNQPLLYASPS+DPR FLGTLPSP   KD+KS     +QE
Sbjct: 62  DAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQE 121

Query: 142 KGLRIAWQYKKYFGESQENVNAIDGKYEFCNDFDLRKPFDRHFFSGKHVECVSLLDSSSL 201
           KGLRIAWQYKKYFGE+Q + ++  GK+EFCN+FDLRKP +R F SGKH++C+S+ DS +L
Sbjct: 122 KGLRIAWQYKKYFGENQHSSDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPNL 181

Query: 202 STTLDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMLELQEWEMLSFLRSLKSM 261
            T  DRCATFLS+ PR+D +ISS GRIAIQS CAPQC+ SNM    EW+MLSF+RSLK M
Sbjct: 182 VTLNDRCATFLSRFPRSDRSISSVGRIAIQSFCAPQCEFSNM----EWDMLSFVRSLKGM 241

Query: 262 LRSSNAVAVVTFSPSLLLPSFSKRWQHMADTLLSVKAIPDEDKELANLLTGYQDMVGLLN 321
           +RSSNAVAVVTF P+LL PS  KRWQHMADTLLSVKAIPDEDKEL  LLTGYQDMVGLLN
Sbjct: 242 VRSSNAVAVVTFPPNLLSPSSCKRWQHMADTLLSVKAIPDEDKELEKLLTGYQDMVGLLN 301

Query: 322 IHKVAQINTQVPRILEATTFSIKLQKRRFLVLECLNQAPVDGSTGSSYGSTGSCSGSSKA 381
           + KVA++NTQVP ILEATT SIKL+KRRF+VLECLNQAP+DGS+GSSYG+TGSCS SSK+
Sbjct: 302 VQKVARLNTQVPVILEATTLSIKLKKRRFMVLECLNQAPIDGSSGSSYGTTGSCSVSSKS 361

Query: 382 GSLDF 387
           G+LDF
Sbjct: 362 GTLDF 362

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ELP4_ARATH4.2e-12967.30Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1[more]
ELP4_DICDI1.1e-2024.29Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV... [more]
ELP4_MOUSE1.8e-1825.15Elongator complex protein 4 OS=Mus musculus GN=Elp4 PE=1 SV=2[more]
ELP4_BOVIN6.7e-1824.55Elongator complex protein 4 OS=Bos taurus GN=ELP4 PE=2 SV=1[more]
ELP4_XENLA5.6e-1725.83Elongator complex protein 4 OS=Xenopus laevis GN=elp4 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KLQ1_CUCSA7.6e-18690.14Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1[more]
M5X0U1_PRUPE2.1e-15677.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1[more]
A0A061FL38_THECC2.6e-15477.87Elongator complex protein 4 isoform 2 OS=Theobroma cacao GN=TCM_042519 PE=4 SV=1[more]
B9HSP5_POPTR3.8e-15374.32Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1[more]
V4WEH9_9ROSI4.9e-15374.80Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008278mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G11220.21.6e-12663.90 Paxneb protein-related[more]
Match NameE-valueIdentityDescription
gi|449451375|ref|XP_004143437.1|1.1e-18590.14PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus][more]
gi|659079925|ref|XP_008440520.1|5.9e-18489.59PREDICTED: elongator complex protein 4 [Cucumis melo][more]
gi|595862862|ref|XP_007211476.1|3.1e-15677.26hypothetical protein PRUPE_ppa007585mg [Prunus persica][more]
gi|764519288|ref|XP_011468400.1|3.4e-15578.08PREDICTED: elongator complex protein 4-like [Fragaria vesca subsp. vesca][more]
gi|645234609|ref|XP_008223887.1|4.4e-15576.71PREDICTED: elongator complex protein 4 isoform X1 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008728Elongator_complex_protein_4
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0033588Elongator holoenzyme complex
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0002098 tRNA wobble uridine modification
cellular_component GO:0033588 Elongator holoenzyme complex
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G005820.1CmaCh07G005820.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008728Elongator complex protein 4PANTHERPTHR12896PAX6 NEIGHBOR PROTEIN PAXNEBcoord: 27..386
score: 1.9E
IPR008728Elongator complex protein 4PFAMPF05625PAXNEBcoord: 40..386
score: 2.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 53..124
score: 3.1E-9coord: 172..302
score: 3.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 173..298
score: 3.56E-9coord: 54..125
score: 3.5
NoneNo IPR availablePANTHERPTHR12896:SF1ELONGATOR COMPLEX PROTEIN 4coord: 27..386
score: 1.9E

The following gene(s) are paralogous to this gene:

None