CSPI06G29630.2 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G29630.2
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Elongator complex 4
Location	Chr6 : 25671741 .. 25676030 (-)
Sequence length	876

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATAAGAAGAAGACAGCACAACAAGGGTGAGGGTGGATATAATTGAGAAATTTTGTGTGTTTTCCCCAATCAATGGGTAAAAAGTGAAATCCACTATTGAACAGGAAATTAGAAAAAAGAAGTGTGATGAATTGTTTGTGATGGATGATATGGTTAGGAGATTATTGTAGATGGGTTAAGTTGATGTGCAAGAGTTGGGGCATTGGTTTATAAAAATTATTCGGAAGTGGAAGCAAATTAGAAATAATTACGACGTACTGTTAATTAACCTAGGCTATTTTTGTAGTTGGCGCTGTCTAAGGCCCCTTATTTGCTAAAATTGCAAAGTGGCTTCTGCACACAAAACCCCACGGTCGAATTGAGAAGAATCCAGTTCTTACTTCTTGCTCCCGCCAATTTTTTCAATTAAACTTCTATTGATTTGAGGGAAACTCAATTCCCAACGTTGCATCTCAGGTATGTGCTTCATGAATCTTTGTAATTATTCCGTAATTTTTCTAGTTTTCCGGCGGCTGCTAAGTAAATGAATCTTCTTTTGCGTTGCCCATCAAGTGTTTGATGAAAAGCCCATATGAGTTATTTCAGTAAAGTTGCAATATTTGTTGGACTGATGGAGTTTCTTATTTTAACCTGTATGTATGTATGAATAGTTTCATTTTTGCTCTTACTTTGTCGCCGTCTTCTTCTTTCCCTAATCAGTTTATTATTGTCGTGCATCGTATGATTTAAGACAGTTAATTGCAGCTTTCAGGATCTTCATTGACTTGGGTAGACCACAGAACTATCTTTTGGATGATTTACTCAACGCTTTAAAGCATTAACCAAAATATGGCAGCGACAAAGCCTCGGACAAGCAGCTTCTCACGCAATTTTTCTTCTGCCCATTCATCTAAGACGCCAGGATTTAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAGTACTTTCAGCACCATATTCATCAATTCAAAATTGTTGGAGTTACCCATATCCTACATTTGGACTAGCTTCAATTTCTCCATTTTTTTGGTTGCAGAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTGATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGTGCTATACTTTTTATTAACTTATGCAACTATTCGATTTCGGATTTAGATGGAAAGATGTATGATCGGATTGGCTTTATTTCAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGGTAATCTTACTGACCTCAACCTAATAGTTTTTGGCTGGTGTTTGATCTCAATGAACAACAACCAATGAATTGTTTTAATTATGTGGTGAAACTGCTTGTCATATTATGATGAAGTCTTCTGGGAAAAAGTACAACTTTCTGTCAACTTTCATGTAGTATATGTACTTAGTTCATGTCCATTCGAGGATTGCAGTACAACTTTCATCCTGACCTGTTTCTCATGTTACAAAAACATCTTGAAATCTATTCATTTTTCCCAACCCCTTCAATAATGACTCACTCTCACTGCCACAACCTTAAATATAGTGCAATACTGTTCTTATTGGAGATAATTATGTAATTCTTGTACAGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGGTACGGTTGACCTCTGCTTTCCCTCCTAAATTACATATATTAAAGTCATTGCATTAGTAAGTTAGATTCAATTTCAATTCATTGTAAAATATTTGAAGCGGCCATTGGGATCTAGAGAACGTTTGATAAACCTGTGCTAGCTTCTCTTTGAGATGGAAATAGTTGGATTGGGATCTTGGGTTAGATTCTGTATCTCCTCGTTGGGATTTGGAGAACGTTTGATAAAGAAAAATAGGGTCTTCTTATCTAATATAGAGGTGATTGGGATTTGGAACATAATTGGGCATCAAATTACATCATGCAGTGTTTTCATGACATGTAGTTTTTGCTAAACGCAACCATCAGAGCTCATTTTCTAACTCCAAATACAAGAGCAATAACTTTAGGCCTATATGAAATGAACTATTCTGGATTTGATCTGTAATTTATCCCACCTTCAGATTTGGCATCCAAGAAAACCTTTTGTTAGAGAGTGGGCGTGGAATCTATTTGGGAGAAAACCTGAATTGTGGACTGAATTGATTATTGTTTATTATTATTTTCTGAAAGGAAACCAGTTTTTCATTGATGAAATGAAAAGATACTAATGTGCAAAATACATTTGAAACAAAATAAGCCGGTAAGGCAAATACAACTAAATTTAGCACATAACTGACCTAATCAAGGAAAGTAAAGAAAATACAATCAAATATAAGCCCACAACAGAACAAAATGACTTGAAACGAAACTCTAAACATCAACTGATTTTGTCCCTTGTTCGTTGTTGTACAGCGTCTTGGATATATGTTGAGGCCCTTCTTTTCATCTGTTTGCTTTTGCAACCTTGTGCACCCTCTTATTTTTTTCATATGAAAGTTTTGTTTTCAAAAGAAAAAAATGGGGAAAAGAAAAAATGAATCTGTCAATTGGGGTAATTTGAACTTAGAAGTTATTTTTAATTTATGTTTGATGTGATCACTCCAATAGTACTTACATTGATGTCATGCGACAATTTCAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGTTAGTGACAAATTAAATTTATGGTGGCAACGATCACATTATAATGATCGTTCGTTAAGTTTCATTAAATTGATAAAGCTCTGTGCACATTTTCCTCCAACAGAAGATTTGAAATTCTTTACTGTCTTAAAAGTCTACGTTTGCTGCAGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGGTTTAAACTTGGCAACTATGTTACCTTTTTGTCTCTGGCATCAATGAGAATTAACTAGAAATTATTACAGATGAGGATAAGGAATTAGCAAAGCTCCTCACTGGTTACCAAGACATGGTTGGTCTTCTCAATGTGCATAAAGTAGCTCAACTCAATACACAGGTATGCATGCCTGCAACTTAGGAATGGACTGAATGGTGAAATGCTGTTTGTGCAATTTTTCCCCCCAACGTTAGCTTCTTTACTCTTCTGCATACTTTTATTGGCTTTGGTTCATACGTGAGCCGCATGACTACATCCCAATGGTCATCTTGACTCTTTATTTATAACTGGACTTGGTATGCATCAATATTCAGGTTGATTTAATGTTTAAGCGGTTTAATCTAGAAAAAATCTCAACTAGGGAAGTCATTTTAATTTCAACTAAAATGTCAAAGCTTGGAATTTTCACTTCTAAGTGTCCTTGAACTAAAATTTTAAAAATGTATATATCTGATCTTCAGAAACCTTCACTGATTGATCTATTTCCCGAACTTTCTAAATTGAAATATAATTTTCCTGGATGATTACTTCTTTTTAGCTGGTTTCTAACCGTGCTCATTGATTTCAAAATCCAACGGCAGGTTCCAAAGATTCTTGAGGCGACTACGTTCTCTATAAAGTTGCAAAAGAGAAGGTACTTAGTTTTAGAATGTCTTAATCAAGCGCCTGTTGATGCTTCAAGTGGTAGCTCATATGGCTCAACTGGGAGTTGTTCTGGCTCCTCTAAGACAGCTTCTCTCGAGTTTTAGTTTGCTAGTGCCGTCAGCATAAAGAGTTTAAGGGTTGAATGATTGAAGTTAAATGTTAAGTTTAAGATGATATTTTATTGATTGTTGATTAGTTATATTTTCCCTTGCCCTTTTGGATCCACTATTGTTTTTTAATTTTATGTCCATATCGTCTTGAATTTTTT

mRNA sequence

ATGGCAGCGACAAAGCCTCGGACAAGCAGCTTCTCACGCAATTTTTCTTCTGCCCATTCATCTAAGACGCCAGGATTTAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTGATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGGTTTAAACTTGGCAACTATGTTACCTTTTTGTCTCTGGCATCAATGA

Coding sequence (CDS)

ATGGCAGCGACAAAGCCTCGGACAAGCAGCTTCTCACGCAATTTTTCTTCTGCCCATTCATCTAAGACGCCAGGATTTAAACACGGTCCCAATGGCACGACATTCATCTCATCCGGAATACCAGACCTTGACAAGATTCTTTGTGGTGGGTTTCCTTTGGGAAGCTTGGTCTTGGTGATGGAAGATGCAGAAGCTCCTCATCACATGCTTTTATTGCGGAATTTTATGTCTCAGGGACTTGTTCATGACCAACCTCTTCTTTATGCTAGTCCATCCAGAGACCCTAGAGGATTCCTGGGTACTTTGCCGAGCCCAGGGGCATCCAAAGATGACAAATCTCGTGATAATTCTACTGAACAGGAAAAGGGCTTGAGGATTGCTTGGCAATATAAGAAGTATTTTGGAGACGATCAAGAGAGCGCCAATGCAATTGATAGTAAATACGAGTTTTGCAATGACTTTGATTTGCGAAGGCCATTTGACAGACATTTTTTCAGCGGAAAGCATGTGGAATGTGTTAGTATTCTAGATTCTTCTAGTCTTTCTACTCTTCGTGATCGCTGTGCCACGTTCCTATCACAAGTTCCAAGAAATGATGGCAATATATCCTCTGGTGGCCGTATTGCCATTCAATCATTATGTGCTCCACAATGTGATCACTCCAACATGGAATGGGAAATGCTTTCCTTTTTAAGGTCTCTGAAAAGCATGGTAAGGTCCTCCAATGCAGTAGCCGTAGTGACGTTTCCACCTTCTCTTCTTTTGCCGTCGTTCTCTAAAAGATGGCAGCACATGGCAGATACCTTGCTTTCTGTCAGAGCAATCCCAGGTTTAAACTTGGCAACTATGTTACCTTTTTGTCTCTGGCATCAATGA

Homology

[Close]

BLAST of CSPI06G29630.2 vs. Swiss-Prot
Match: ELP4_ARATH (Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 9.6e-94
Identity = 178/277 (64.26%), Postives = 215/277 (77.62%), Query Frame = 1


Query: 1   MAATKPRTSS-FSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R+SS FSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 120
           MED EAPHHM LLR +MSQGLV++QPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 240
            LS  +D CATFLS+ PRN  NI+S GRIAIQS C+P C++S  E +MLSF+R LKSM+ 
Sbjct: 181 DLSIAQDHCATFLSKFPRNSSNIASIGRIAIQSFCSPLCEYSEKESDMLSFIRLLKSMLM 240

Query: 241 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
            SNAVA+VTFPPSLL PS SKR QHMADTLLS++AIP
Sbjct: 241 VSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIP 271

[Close]

BLAST of CSPI06G29630.2 vs. Swiss-Prot
Match: ELP4_DICDI (Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.2e-20
Identity = 80/307 (26.06%), Postives = 150/307 (48.86%), Query Frame = 1


Query: 12  SRNFSSAHSSKTPGFKHGPNG--------TTFISSGIPDLDKILCGGFPLGSLVLVMEDA 71
           + N S+  ++ T   K  PNG            S+G+ DLD I+ GG P+GS++++ ED 
Sbjct: 29  TNNTSTTTTTTTTAAKKLPNGCKISIKNSNLLTSTGLTDLDDIIGGGIPIGSILMIEEDI 88

Query: 72  EAPHHMLLLRNFMSQGLVHDQPLLYAS-PSRDPRGFLGTLPSP-------GASKDD---- 131
            + ++M LL+ F+++G++  Q + ++S    DP   L  LP+         A K+D    
Sbjct: 89  NSSYYMFLLKYFLAEGVLQQQGVFFSSLIGIDPFEILNKLPARITKEEEIEADKNDTTNN 148

Query: 132 -----KSRDNSTEQEKGLRIAWQYKKYFGDD------QESANAIDSKYEFCNDFDLRRPF 191
                 + +N+ +    L+IAW+Y++Y  ++      Q+SA+ I ++  FC+ +D  R  
Sbjct: 149 INTNINTNNNNKQPTDELKIAWRYQQYVSNELSKQQQQQSASTIMNQ-TFCHSYDFTRKM 208

Query: 192 DRHFFSGKHVECVS---ILDSSSLSTLRDRCATFLSQVPRNDGNISSGG------RIAIQ 251
           +    + + +  +S      +   S  R+      + V + +   +         R+ IQ
Sbjct: 209 NVQSMNPELIHTLSHDAQSQAEGTSPYRNLFLEIQNLVYKYNKEAAMNPDQTRVLRLCIQ 268

Query: 252 SLCAPQCDHSNMEWEMLSFLRSLKSMVRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLS 279
           S  +P    SN E  ++ FL +LK ++RSS A  V++ P  +   +F K+  H+ DT++S
Sbjct: 269 SFSSPL--WSNDEEGVIEFLHALKGLLRSSVATCVISVPTYIYSGAFVKKIAHLCDTVVS 328

[Close]

BLAST of CSPI06G29630.2 vs. Swiss-Prot
Match: ELP4_MOUSE (Elongator complex protein 4 OS=Mus musculus GN=Elp4 PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15
Identity = 71/279 (25.45%), Postives = 127/279 (45.52%), Query Frame = 1


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHDQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+L+L+ ED    +  LL + FM++G+++   LL AS
Sbjct: 57  NGQLLVSTGLPALDQLLGGGLAVGTLLLIEEDKYNIYSPLLFKYFMAEGIINGHTLLVAS 116

Query: 91  PSRDPRGFLGTLPSPGASKDDKSR------DNSTEQEKGLRIAWQYKKYFGDDQESANAI 150
              +P   L  LP+P    + K          + E    ++IAW+Y+       E     
Sbjct: 117 AKENPAKILQELPAPLLDDNSKKELEDVHSAKTPEPNVNMKIAWRYQ--LQPKMEVGPVS 176

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSTLRDRCATFLSQVPR 210
            S++    D   R P++         FF  +H+      +S  LS    R   F+ +   
Sbjct: 177 SSRFGHYYDLSKRIPWELLQSSKWHGFFLPEHISPDLKGESCFLSCGYMRLLEFIQKSVY 236

Query: 211 NDGNISSGG--------RIAIQSL----------CAPQCDHSNMEWEMLSFLRSLKSMVR 270
            +G   +          RI IQ+L          C   CD+++    +  FL  L+ ++R
Sbjct: 237 AEGFDGANPQKKQKNILRIGIQNLGSPLWGDDICCKENCDNNH---RLTKFLYILRGLLR 296

Query: 271 SSNAVAVVTFPPSLLL-PSFSKRWQHMADTLLSVRAIPG 278
           SS +  ++T P  L+   S + R ++++DT++ + +  G
Sbjct: 297 SSLSACIITMPAHLVQNKSITTRVRNLSDTVVGLESFIG 330

[Close]

BLAST of CSPI06G29630.2 vs. Swiss-Prot
Match: ELP4_BOVIN (Elongator complex protein 4 OS=Bos taurus GN=ELP4 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 69/279 (24.73%), Postives = 125/279 (44.80%), Query Frame = 1


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHDQPLLYAS 90
           NG   +S+G+P LD++L GG  +G+++L+ ED    +  LL + F+++G+V    LL AS
Sbjct: 58  NGQLLVSTGLPALDQLLGGGLAVGTVLLIEEDKYNIYSPLLFKYFLAEGIVSGHALLVAS 117

Query: 91  PSRDPRGFLGTLPSP------GASKDDKSRDNSTEQEKGLRIAWQYKKYFGDDQESANAI 150
              DP   L  LP+P          D+    +  E +  ++IAW+Y+       E+    
Sbjct: 118 AKEDPADILQKLPAPLIDDSYKKECDEDVCSHKMEPDIKMKIAWRYQLL--PKMEAGPVS 177

Query: 151 DSKYEFCNDFDLRRPFD-------RHFFSGKHVECVSILDSSSLSTLRDRCATFLSQVPR 210
            S++    D   R P +         FF  + +     ++S SL+    +   F+  +  
Sbjct: 178 SSRFGHYYDISKRIPQELIETSKWHGFFLPEKISSAFNVESCSLTPGYMKLLQFIQNIIY 237

Query: 211 NDGNISSGG--------RIAIQSL----------CAPQCDHSNMEWEMLSFLRSLKSMVR 270
            +G   S          RI IQ+L          C   CD S+    +  FL  L+ ++R
Sbjct: 238 KEGFDGSNPQKKQKNILRIGIQNLGSPLWGDDICCTENCDTSH---SLTKFLYILRGLLR 297

Query: 271 SSNAVAVVTFPPSLLL-PSFSKRWQHMADTLLSVRAIPG 278
           +S +  ++T P  L+   +   R  +++DT++ + +  G
Sbjct: 298 TSLSACIITMPTHLIQNKAVIARVTNLSDTVVGLESFIG 331

[Close]

BLAST of CSPI06G29630.2 vs. Swiss-Prot
Match: ELP4_XENLA (Elongator complex protein 4 OS=Xenopus laevis GN=elp4 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12
Identity = 69/282 (24.47%), Postives = 129/282 (45.74%), Query Frame = 1


Query: 31  NGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHHMLLLRNFMSQGLVHDQPLLYAS 90
           NG   +S+G+P LD IL GG  +G+L+L+ ED    +  LLL+ F+++G+V    +  AS
Sbjct: 42  NGQLLVSTGVPSLDHILGGGLAVGTLLLIEEDTYGTYSHLLLKYFLAEGVVSGHEVFVAS 101

Query: 91  PSRDPRGFLGTLPSPGAS----KDDKSRDNST-----EQEKGLRIAWQYKKYFGDDQESA 150
            + DP   L  LPSP       ++D  R   T     + ++ ++IAW+Y+       E+ 
Sbjct: 102 ANDDPTETLQDLPSPLTDEVPRQNDPKRTKDTSGPADDSQEMMKIAWRYQNL--PKVETL 161

Query: 151 NAIDSKYEFCNDFDLRRPFD-----RHFFSGKHVECVSILDSSSLSTLRDRCATFLSQVP 210
               S++    D     P +       F+  + +      + S ++   ++    + +V 
Sbjct: 162 PISSSRFGHYYDLSKTMPPEMSAKSHRFYLPRIMSANQKQNVSEVTCNYNQLLESIQRVV 221

Query: 211 RNDGNISSGG--------RIAIQSL---------CA---PQCDHSNMEWEMLSFLRSLKS 270
             +G   S          R+ I+SL         C+   P+  HS     +  FL  L+ 
Sbjct: 222 HQEGYDGSNPQKRPKTILRLGIESLGSVLWADDICSQERPENQHS-----LTRFLYGLRG 281

Query: 271 MVRSSNAVAVVTFPPSLLL-PSFSKRWQHMADTLLSVRAIPG 278
           ++R+S +V V+T P  L+   + + R + ++DT++ + +  G
Sbjct: 282 LLRTSLSVCVITVPTYLIQNKAITTRLRSLSDTVVGLESFIG 316

[Close]

BLAST of CSPI06G29630.2 vs. TrEMBL
Match: A0A0A0KLQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 2.8e-156
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 276

[Close]

BLAST of CSPI06G29630.2 vs. TrEMBL
Match: M5X0U1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 6.0e-119
Identity = 213/276 (77.17%), Postives = 239/276 (86.59%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           M+ TK RTSSFSRNF+SA+SS+ PG KHGPNGT FISSGIPDLDKIL GGF LGSLV+VM
Sbjct: 1   MSVTKTRTSSFSRNFASANSSQIPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +Q
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q S ++   K+EFCN+FDLR+P +R F SGKH++C+SI DS +
Sbjct: 121 EKGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPN 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           L TL DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNMEWEMLSF+RSLK MVRS
Sbjct: 181 LVTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNMEWEMLSFVRSLKGMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           SNAVA VTFPP+LL PS  KRWQHMADTLLSV+AIP
Sbjct: 241 SNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIP 276

[Close]

BLAST of CSPI06G29630.2 vs. TrEMBL
Match: B9HSP5_POPTR (Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 2.6e-114
Identity = 204/277 (73.65%), Postives = 240/277 (86.64%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATK R SSFSRN S+  + + PG K GPNGT F+SSGIPDLDKIL GGFPLGSLV++M
Sbjct: 1   MAATKTRISSFSRNISAVSAPQLPGIKCGPNGTFFVSSGIPDLDKILGGGFPLGSLVMIM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLV +QPLLYASP++DPRGFLGTLP P +SKDDKSR++ TEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESA-NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           EKGLRIAWQYKKYF ++Q++  +  DS  EFCNDFDLR+P ++HF+SG+ V+CVSI DS 
Sbjct: 121 EKGLRIAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKDSP 180

Query: 181 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 240
           +L+TL DRCATFL+Q PRNDG+ S  GRIAIQSLCAPQC+ S M+W+MLSF+RSLKSM+R
Sbjct: 181 NLATLHDRCATFLAQFPRNDGSFSCMGRIAIQSLCAPQCELSKMDWDMLSFIRSLKSMLR 240

Query: 241 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           S+NAVA++TFP SLL PSF KRWQHMAD LLSV+AIP
Sbjct: 241 SANAVAIITFPSSLLSPSFCKRWQHMADVLLSVKAIP 277

[Close]

BLAST of CSPI06G29630.2 vs. TrEMBL
Match: A0A0B0P040_GOSAR (Elongator complex 4 OS=Gossypium arboreum GN=F383_07553 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 3.4e-114
Identity = 207/275 (75.27%), Postives = 234/275 (85.09%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAA K RTS+FSRN S+A  S  PG K GPNGT F+SSGIPDLDKIL GGFPLGSLV+VM
Sbjct: 1   MAAAKTRTSTFSRNLSTAAPSHGPGLKCGPNGTVFLSSGIPDLDKILGGGFPLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFM+QGLV  QPLLY+SP+RDPRGFLGTLPSP ASKDDKS++   +Q
Sbjct: 61  EDAEAPHHMLLLRNFMAQGLVLGQPLLYSSPARDPRGFLGTLPSPAASKDDKSQERDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG+ Q      DSK+E+ N+FDLR+P +RHF +G  ++CVSI D   
Sbjct: 121 EKGLRIAWQYKKYFGESQLDGQR-DSKHEYSNEFDLRKPLERHFINGPRIDCVSIQDCPD 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQ PRNDG+IS  GRIAIQS CAPQC +SNMEW+MLSF+R LKSMVRS
Sbjct: 181 LSTLRDRCATFLSQFPRNDGSISCAGRIAIQSFCAPQCAYSNMEWDMLSFIRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAI 276
           SN+VA++TFPPSLL PSF KRWQHMADTLLSV+AI
Sbjct: 241 SNSVAIITFPPSLLSPSFCKRWQHMADTLLSVKAI 274

[Close]

BLAST of CSPI06G29630.2 vs. TrEMBL
Match: A0A0D2T2L5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G084700 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.2e-113
Identity = 209/275 (76.00%), Postives = 235/275 (85.45%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAA K RTS+FSRN S+A  S  PG K GPNGT F+SSGIPDLDKIL GGFPLGSLV+VM
Sbjct: 1   MAAAKTRTSTFSRNLSTAPPSHGPGLKCGPNGTVFLSSGIPDLDKILGGGFPLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFM+QGLV  Q LLY+SP+RDPRGFLGTLPSP ASKDDKSR+   +Q
Sbjct: 61  EDAEAPHHMLLLRNFMAQGLVLGQHLLYSSPARDPRGFLGTLPSPAASKDDKSRERDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q      D K+E+ N+FDLR+P +RHF +G  ++CVSI D S 
Sbjct: 121 EKGLRIAWQYKKYFGENQLDGQR-DGKHEYSNEFDLRKPLERHFINGPRIDCVSIQD-SD 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQ PRNDG+IS  GRIAIQS CAPQC +SNMEW+MLSF+RSLKSMVRS
Sbjct: 181 LSTLRDRCATFLSQFPRNDGSISCAGRIAIQSFCAPQCAYSNMEWDMLSFIRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAI 276
           SN+VA+VTFPPSLL PSF KRWQHMADTLLSV+AI
Sbjct: 241 SNSVAIVTFPPSLLSPSFCKRWQHMADTLLSVKAI 273

[Close]

BLAST of CSPI06G29630.2 vs. TAIR10
Match: AT3G11220.2 (AT3G11220.2 Paxneb protein-related)

HSP 1 Score: 332.0 bits (850), Expect = 3.6e-91
Identity = 177/295 (60.00%), Postives = 215/295 (72.88%), Query Frame = 1


Query: 1   MAATKPRTSS-FSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLV 60
           MAA   R+SS FSRN S   S + PG K GPNGT FISSGI DLD+IL GG+PLGSLV+V
Sbjct: 1   MAAPNVRSSSSFSRNISVVSSPQIPGLKSGPNGTAFISSGIRDLDRILGGGYPLGSLVMV 60

Query: 61  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 120
           MED EAPHHM LLR +MSQGLV++QPLLYASPS+DP+GFLGTLP P +SK+DK      +
Sbjct: 61  MEDPEAPHHMDLLRTYMSQGLVNNQPLLYASPSKDPKGFLGTLPHPASSKEDKPTAPDPD 120

Query: 121 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 180
           Q + LRIAWQY+KY    +   NAID   ++ NDFD+R+P +R F SG+ ++CVS+LDSS
Sbjct: 121 QGESLRIAWQYRKYL---ENQKNAID---DYSNDFDMRKPLERQFLSGRPIDCVSLLDSS 180

Query: 181 SLSTLRDRCATFLSQVP------------------RNDGNISSGGRIAIQSLCAPQCDHS 240
            LS  +D CATFLS+ P                  +N  NI+S GRIAIQS C+P C++S
Sbjct: 181 DLSIAQDHCATFLSKFPSKFCSSSILFTSLLYFQAQNSSNIASIGRIAIQSFCSPLCEYS 240

Query: 241 NMEWEMLSFLRSLKSMVRSSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
             E +MLSF+R LKSM+  SNAVA+VTFPPSLL PS SKR QHMADTLLS++AIP
Sbjct: 241 EKESDMLSFIRLLKSMLMVSNAVAIVTFPPSLLSPSSSKRLQHMADTLLSIKAIP 289

[Close]

BLAST of CSPI06G29630.2 vs. NCBI nr
Match: gi|449451375|ref|XP_004143437.1| (PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 559.3 bits (1440), Expect = 4.0e-156
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS
Sbjct: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP
Sbjct: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 276

[Close]

BLAST of CSPI06G29630.2 vs. NCBI nr
Match: gi|659079925|ref|XP_008440520.1| (PREDICTED: elongator complex protein 4 [Cucumis melo])

HSP 1 Score: 541.2 bits (1393), Expect = 1.1e-150
Identity = 266/276 (96.38%), Postives = 269/276 (97.46%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           MAATKPRT SFSRNFSSAHSSKTPG+KHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM
Sbjct: 1   MAATKPRTGSFSRNFSSAHSSKTPGYKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNS+EQ
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSSEQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFGDDQES NAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS
Sbjct: 121 EKGLRIAWQYKKYFGDDQESTNAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           LS  RDRCATFLSQVPRNDGNISS GRIAIQSLCAPQCDHSNMEWEMLSFLR LKSMVRS
Sbjct: 181 LSNFRDRCATFLSQVPRNDGNISSAGRIAIQSLCAPQCDHSNMEWEMLSFLRYLKSMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           SNAVAVVTFPPSLL PSFSKRWQHMADTLLSVRAIP
Sbjct: 241 SNAVAVVTFPPSLLSPSFSKRWQHMADTLLSVRAIP 276

[Close]

BLAST of CSPI06G29630.2 vs. NCBI nr
Match: gi|778718945|ref|XP_011657939.1| (PREDICTED: elongator complex protein 4 isoform X2 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 1.4e-121
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 60  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 119
           MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE
Sbjct: 1   MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 60

Query: 120 QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 179
           QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS
Sbjct: 61  QEKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSS 120

Query: 180 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 239
           SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR
Sbjct: 121 SLSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVR 180

Query: 240 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP
Sbjct: 181 SSNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 217

[Close]

BLAST of CSPI06G29630.2 vs. NCBI nr
Match: gi|595862862|ref|XP_007211476.1| (hypothetical protein PRUPE_ppa007585mg [Prunus persica])

HSP 1 Score: 435.3 bits (1118), Expect = 8.6e-119
Identity = 213/276 (77.17%), Postives = 239/276 (86.59%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           M+ TK RTSSFSRNF+SA+SS+ PG KHGPNGT FISSGIPDLDKIL GGF LGSLV+VM
Sbjct: 1   MSVTKTRTSSFSRNFASANSSQIPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +Q
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q S ++   K+EFCN+FDLR+P +R F SGKH++C+SI DS +
Sbjct: 121 EKGLRIAWQYKKYFGENQHSFDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPN 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           L TL DRCATFLSQ PR+DG+ISS GRIAIQS CAPQC+ SNMEWEMLSF+RSLK MVRS
Sbjct: 181 LVTLNDRCATFLSQFPRSDGSISSVGRIAIQSFCAPQCEFSNMEWEMLSFVRSLKGMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           SNAVA VTFPP+LL PS  KRWQHMADTLLSV+AIP
Sbjct: 241 SNAVAFVTFPPNLLSPSSCKRWQHMADTLLSVKAIP 276

[Close]

BLAST of CSPI06G29630.2 vs. NCBI nr
Match: gi|645234609|ref|XP_008223887.1| (PREDICTED: elongator complex protein 4 isoform X1 [Prunus mume])

HSP 1 Score: 434.5 bits (1116), Expect = 1.5e-118
Identity = 212/276 (76.81%), Postives = 241/276 (87.32%), Query Frame = 1


Query: 1   MAATKPRTSSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVM 60
           M+ATK RTSSFSRNF+SA+SS+ PG KHGPNGT FISSGIPDLDKIL GGF LGSLV+VM
Sbjct: 1   MSATKTRTSSFSRNFASANSSQIPGLKHGPNGTVFISSGIPDLDKILGGGFSLGSLVMVM 60

Query: 61  EDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQ 120
           EDAEAPHHMLLLRNFMSQGLVH+QPLLYASPS+DPR FLGTLPSP   KDDKS     +Q
Sbjct: 61  EDAEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRQFLGTLPSPAVPKDDKSSHRDPDQ 120

Query: 121 EKGLRIAWQYKKYFGDDQESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDSSS 180
           EKGLRIAWQYKKYFG++Q S+++   K+EFCN+FDLR+P +R F SGKH++C+SI DS +
Sbjct: 121 EKGLRIAWQYKKYFGENQHSSDSQGGKHEFCNEFDLRKPLERQFLSGKHIDCISIQDSPN 180

Query: 181 LSTLRDRCATFLSQVPRNDGNISSGGRIAIQSLCAPQCDHSNMEWEMLSFLRSLKSMVRS 240
           L TL DRCATFLS+ PR+D +ISS GRIAIQS CAPQC+ SNMEW+MLSF+RSLK MVRS
Sbjct: 181 LVTLNDRCATFLSRFPRSDRSISSVGRIAIQSFCAPQCEFSNMEWDMLSFVRSLKGMVRS 240

Query: 241 SNAVAVVTFPPSLLLPSFSKRWQHMADTLLSVRAIP 277
           SNAVAVVTFPP+LL PS  KRWQHMADTLLSV+AIP
Sbjct: 241 SNAVAVVTFPPNLLSPSSCKRWQHMADTLLSVKAIP 276

The following BLAST results are available for this feature:

BLAST of CSPI06G29630.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ELP4_ARATH	9.6e-94	64.26	Elongator complex protein 4 OS=Arabidopsis thaliana GN=ELP4 PE=1 SV=1	[more]
ELP4_DICDI	9.2e-20	26.06	Probable elongator complex protein 4 OS=Dictyostelium discoideum GN=elp4 PE=3 SV...	[more]
ELP4_MOUSE	1.8e-15	25.45	Elongator complex protein 4 OS=Mus musculus GN=Elp4 PE=1 SV=2	[more]
ELP4_BOVIN	1.5e-14	24.73	Elongator complex protein 4 OS=Bos taurus GN=ELP4 PE=2 SV=1	[more]
ELP4_XENLA	1.1e-12	24.47	Elongator complex protein 4 OS=Xenopus laevis GN=elp4 PE=2 SV=1	[more]

BLAST of CSPI06G29630.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLQ1_CUCSA	2.8e-156	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497360 PE=4 SV=1	[more]
M5X0U1_PRUPE	6.0e-119	77.17	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007585mg PE=4 SV=1	[more]
B9HSP5_POPTR	2.6e-114	73.65	Paxneb family protein OS=Populus trichocarpa GN=POPTR_0010s19680g PE=4 SV=1	[more]
A0A0B0P040_GOSAR	3.4e-114	75.27	Elongator complex 4 OS=Gossypium arboreum GN=F383_07553 PE=4 SV=1	[more]
A0A0D2T2L5_GOSRA	2.2e-113	76.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G084700 PE=4 SV=1	[more]

BLAST of CSPI06G29630.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G11220.2	3.6e-91	60.00	Paxneb protein-related	[more]

BLAST of CSPI06G29630.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451375\|ref\|XP_004143437.1\|	4.0e-156	100.00	PREDICTED: elongator complex protein 4 isoform X1 [Cucumis sativus]	[more]
gi\|659079925\|ref\|XP_008440520.1\|	1.1e-150	96.38	PREDICTED: elongator complex protein 4 [Cucumis melo]	[more]
gi\|778718945\|ref\|XP_011657939.1\|	1.4e-121	100.00	PREDICTED: elongator complex protein 4 isoform X2 [Cucumis sativus]	[more]
gi\|595862862\|ref\|XP_007211476.1\|	8.6e-119	77.17	hypothetical protein PRUPE_ppa007585mg [Prunus persica]	[more]
gi\|645234609\|ref\|XP_008223887.1\|	1.5e-118	76.81	PREDICTED: elongator complex protein 4 isoform X1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008728	Elongator_complex_protein_4
IPR027417	P-loop_NTPase

Vocabulary: **Cellular Component**
Term	Definition
GO:0033588	Elongator holoenzyme complex

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0033588	Elongator holoenzyme complex
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G29630	CSPI06G29630	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.2	CSPI06G29630.2-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.2.utr3p2	CSPI06G29630.2.utr3p2	three_prime_UTR
CSPI06G29630.2.utr3p1	CSPI06G29630.2.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.2.cds7	CSPI06G29630.2.cds7	CDS
CSPI06G29630.2.cds6	CSPI06G29630.2.cds6	CDS
CSPI06G29630.2.cds5	CSPI06G29630.2.cds5	CDS
CSPI06G29630.2.cds4	CSPI06G29630.2.cds4	CDS
CSPI06G29630.2.cds3	CSPI06G29630.2.cds3	CDS
CSPI06G29630.2.cds2	CSPI06G29630.2.cds2	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G29630.2.utr5p2	CSPI06G29630.2.utr5p2	five_prime_UTR
CSPI06G29630.2.utr5p1	CSPI06G29630.2.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008728	Elongator complex protein 4	PANTHER	PTHR12896	PAX6 NEIGHBOR PROTEIN PAXNEB	coord: 7..277 score: 1.0
IPR008728	Elongator complex protein 4	PFAM	PF05625	PAXNEB	coord: 21..278 score: 2.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 33..104 score: 7.3E-9coord: 152..273 score: 7.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 153..273 score: 1.13E-7coord: 34..105 score: 1.1