CSPI05G21350 (gene) Wild cucumber (PI 183967)

NameCSPI05G21350
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRanBP2-type zinc finger protein
LocationChr5 : 22111481 .. 22115587 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTGCGCTCATTCACGCTACGAAACGGCGTTCGTACTCCCCAATTACCCGACGAGCATCGCCGTTCCCCACTGAAGAAAAGATTCACGCAGCTATTCCCAGTTCAGAACAAGATCTCTCCGTCATCGTCTTTCTCATACGTCGCAACATGTCTCAGGTCTGCTCACTCTTTTGATTGTATATTGTTTTGTTTTCTCCAAGATTTCGTGGTCTTATTTCCTTAAACCCTAGAAAATCATTGTTAATTATTTATTATCGTTGAATGGAGCATAGTTTGCATCCCGTTGTTCTTCAAGGGATTGGTTTAGAATGATATGTGCCAATTCATCGTAGTCTGGATGATACTTAGTCTCTATTCGATCTGCTTGCGCATTTCTGTCTGTCTTTGTTGTCTCTCTCCGTACGATTTTTTTGTTTCGCATTCAGGTAGGAATTGCGAGATACTTCCGGAGAATTTTGAGTTTGAGAATCTCACTTGAGTTATCCTGGTTTTGAATTAATGGATCCTTTAGTTGTGGAAAATAATTATTTAATCTTCTCTCCTTTTTTTTTTTTTTTTTCTGTGTATTGTACAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTATGTATAGGAAACAGGTTTCCTTTGTAATTCAGTTATGGTTTAATGTTTGATGTAATTCATTCATTATTACGCATGTACATTGGATTTGTAAATGTAATCATTACTTATTATTAGATTTTTTGAGTGAATGCACAATAACGAAACTGAATCTGTTGACATTTGAGTCTTGTGAGATTTCATGTACTCGACATCGTTTGCCGTTAGTTTGCACTTCCTTCTTCTTTTTCTTATTTTAATTTTTACTTTAGTCTACAGCATGTCATAAAGAGTGGGCTCATCTGTGTAGGTCTGTTTACTTGTTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGGTAAGACATGAATGATGTCCCTAGGGAGACTTAGTTATTGCATTTATTTATTTACTCTTCATTTTTTGCAATTAGCAGCATATTCTGGAGTTCATTATGTTTTGCAATTTCAAGTTGCTACCGATTATTAACTACTTTTCATTAAAAAAAAAACTGATTATAAACTACTTGAGCTTTATGGAGTTTATTGAAAGTTTTAGGTTTAGGTTCTCCTTGATCAGTCTCTCTACACTTCTTATACATTTCTTTCATAAAATAAAAGTTGGGTTTTAACCTTCGACATCACCACCATACACTCAAAGTTGAGCACCATATTCTCTTGATGAACGATTAACCTTACTTGAGCTTTCTCTCTCCAGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTATGTTCCCTTTCTTTTTCTGCTCATATTTTTTCAAATAAGAAACTGAATTAAAGGATACACAAGGGTGCATATTCTCCCACACAAGAGGAGCCCAAACCTACTAATATGGTCTCCAATCCAAAAGAATAATACCTATTAGATATTACATGCTCGCATTTCTTTGTGATTCTTATTTAATACATCATATTATTCTGCCTATAACTTAAAATCCATTTATCTTCCACAAGTATTTTATGAGAAGTGGGTGCTGTTTTGATCAATCGTCCATTTATCTGTTTATTTGGTTTCTTTCTTGTTTCCATAGGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGTAGGTCTTTCAATAGTCAATTTTTGATTCGGTGGCTCATCAGGTTTTTTTGGAGTATTAAGTTCGGTGTACAATTTTAAATCTTTTGGTTTGCTGCAGATATAAAATTTTAGAAAGAAGTGCATTATATATCACGTTACTTTATTCAGTTTAGTTTTGAAAATATGTTTTACTAATACACTAACAAAGAAGTGTAATGTTTTTTTTTTAATTTTTTTTTATTAAAGAAATGATTTTCACTGCTTTGAATGTTGAAGGGTCATATCTTTCCTCTTTGAATGGATATTAAACCTGGATATAAACAAAATGATTTTATTGCCTGAAGTTTTTGTGGATAATTCCTAACGTTTTTTACTGCGGGTCTCAACTATGAACAATGTAGTTGGTTTTCCATAAATCTATCTGAAGGCAATTTGTATTACCGTCCTGTCTATCTCACCATTTATGTAAAATTTATGAGCAAAATAAATTTTCCAGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGAAATTTTTTATCATCTAATTTCTTACTTATGCTCACCCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGTCTGTCAAGCTATTTTCTTAAGAGCGAATGTTTTTCTTCATGCCTGGCATGTTTCTGTATGCATAACTCCCTTGTGTAAAATTTTAAGTTCACTTGATTTTTTTTGCAATTTTAACAATTTTATTTTATTTTGAATTGCAGGCTTCTAAAAATGACAAAAGTTCTAGTAAGTTGAATATAATGGCCCTTTCCATCAGAACCCATTCCCTTTTCGAAATTCTTGAAACTTTCATGATTTCTTGATTTCTAACGTACTTGTCAATGCCTTGCAGAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGGTCTGTTGTATGAGTTTATGTATCTCTGTGTGTTTGCAATTGCTTGTGCTTTTGTTCATATATGTATGCATTATGAAGTGGATTCCATACAATTTAATTAACAAGATAATTAATGAATCACATGAAAAAGGGAACCGGAACCCTTTCGGTATGTTGTCTGTGGTTCTGGTGCTTTCGTTGTGTATACCCGTTTCTTTTCTTTTTTTTTCTCTTTTTCTTGATTCTGTTTTGTTTCTCCCATTCATGCATTAATTTGTCATTGTGTGTACTGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCTGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTTAGTGGTACTGGTCTTTTCACTCAATTTAATGCACTATACAATACATATGATCTGGCAAAAGATTTCATGGTTGGTTTCTGATATTAGGGAACATTGAATCCACTTTTTTAGTCTAGTGGGCCTGTTAATTTGTGCACTAAAATATGTTATGAGTAGACTAAACTGTGCCCTTTTGGGTTACGGTTTGATCTCTTCATTGTCTTTTGTGCTGTTGTGTTGGGTGTGTGTGTGTGCGCGCGCCAAACTGATAGTTTTTCTAGGACAGGGTCCCAAAGTTGAAAGGATGCATTGAATTAGATAGGACTTTGACCCTTATTTGGTGGGGTCACGTCCCACATTCATTATGGTCGTCAAAAGTAATGGTTGCCTTCCCAAATGGAGTTTGAAATTGAGGGAATGACTTAGGTTAGATTAAATGTTGTTAGATTAAATGCCTAGAGC

mRNA sequence

ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGA

Coding sequence (CDS)

ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGA
BLAST of CSPI05G21350 vs. Swiss-Prot
Match: YZR3_ARATH (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.2e-119
Identity = 210/290 (72.41%), Postives = 235/290 (81.03%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGS++PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

BLAST of CSPI05G21350 vs. TrEMBL
Match: A0A0A0KPV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 2.4e-165
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

BLAST of CSPI05G21350 vs. TrEMBL
Match: M5XVW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 3.2e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

BLAST of CSPI05G21350 vs. TrEMBL
Match: A0A067GQ84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.8e-145
Identity = 248/286 (86.71%), Postives = 266/286 (93.01%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNSK A
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNSKPA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQ YS SAPY+GSGAPSSMY G+PPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGI-PPIMDRYGMALPMGPGAMGPRPGFF 180
           SR SAGSPYRPLH+SGP PYS GSMMGN  +YG+ PP+MDRYG+ LPMGP AMGPRPGFF
Sbjct: 121 SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPAAMGPRPGFF 180

Query: 181 PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 240
           PD+ SQ+KGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+K+DK+SKQK P
Sbjct: 181 PDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KS SP  EEN+Q
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

BLAST of CSPI05G21350 vs. TrEMBL
Match: A0A067H2U2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.8e-145
Identity = 248/286 (86.71%), Postives = 266/286 (93.01%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNSK A
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNSKPA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQ YS SAPY+GSGAPSSMY G+PPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGI-PPIMDRYGMALPMGPGAMGPRPGFF 180
           SR SAGSPYRPLH+SGP PYS GSMMGN  +YG+ PP+MDRYG+ LPMGP AMGPRPGFF
Sbjct: 121 SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPAAMGPRPGFF 180

Query: 181 PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 240
           PD+ SQ+KGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+K+DK+SKQK P
Sbjct: 181 PDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KS SP  EEN+Q
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

BLAST of CSPI05G21350 vs. TrEMBL
Match: U5GTH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13880g PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.8e-145
Identity = 245/285 (85.96%), Postives = 268/285 (94.04%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADH SKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHISKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQGYS SAPY+GSGAPSSMY GVPPYGSS+FNGS+IPPYDVPF+GGSAYHYNYG
Sbjct: 61  AKPLQAPQGYS-SAPYLGSGAPSSMYMGVPPYGSSLFNGSSIPPYDVPFTGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLH+SGP PYS GSMMGN  +Y +PP+MDRYG+ +PMGP AMGPRPGFFP
Sbjct: 121 SRLSGGSPYRPLHISGPPPYSGGSMMGNGGMYAMPPLMDRYGLGMPMGPAAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D++SQKKG+D +RDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +K+DK+SKQK PE
Sbjct: 181 DDISQKKGSDASRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQVAKSDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGA+KPAES+KSPSPA +E+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGAEKPAESKKSPSPAPDEDDQ 284

BLAST of CSPI05G21350 vs. TAIR10
Match: AT1G67325.2 (AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-120
Identity = 210/290 (72.41%), Postives = 235/290 (81.03%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGS++PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

BLAST of CSPI05G21350 vs. TAIR10
Match: AT1G50300.1 (AT1G50300.1 TBP-associated factor 15)

HSP 1 Score: 49.3 bits (116), Expect = 4.6e-06
Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 1

Query: 168 GPGAMGPRPGFFPDEMSQKKGADTTR--DNDWACPKCGNINFSFRTVCNMRKCNTPKPG 225
           G GA G  PG       Q  GA T     NDWACP CGN+N++ R  CN+  CNT KPG
Sbjct: 182 GGGADGGAPG------KQPSGAPTGLFGPNDWACPMCGNVNWAKRLKCNI--CNTNKPG 232

BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|449435091|ref|XP_004135329.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 3.5e-165
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|645230954|ref|XP_008222171.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume])

HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|596128412|ref|XP_007222106.1| (hypothetical protein PRUPE_ppa009603mg [Prunus persica])

HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|645230960|ref|XP_008222174.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume])

HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|645230958|ref|XP_008222173.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X4 [Prunus mume])

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 252/286 (88.11%), Postives = 269/286 (94.06%), Query Frame = 1

Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQKTP 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGS QA+KNDK+SKQK P
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQQAAKNDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 286

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YZR3_ARATH2.2e-11972.41RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 P... [more]
Match NameE-valueIdentityDescription
A0A0A0KPV4_CUCSA2.4e-16599.65Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1[more]
M5XVW4_PRUPE3.2e-14988.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1[more]
A0A067GQ84_CITSI2.8e-14586.71Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1[more]
A0A067H2U2_CITSI2.8e-14586.71Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1[more]
U5GTH4_POPTR4.8e-14585.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13880g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G67325.21.3e-12072.41 Ran BP2/NZF zinc finger-like superfamily protein[more]
AT1G50300.14.6e-0649.15 TBP-associated factor 15[more]
Match NameE-valueIdentityDescription
gi|449435091|ref|XP_004135329.1|3.5e-16599.65PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus][more]
gi|645230954|ref|XP_008222171.1|4.6e-14988.42PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume][more]
gi|596128412|ref|XP_007222106.1|4.6e-14988.42hypothetical protein PRUPE_ppa009603mg [Prunus persica][more]
gi|645230960|ref|XP_008222174.1|4.6e-14988.42PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume][more]
gi|645230958|ref|XP_008222173.1|1.1e-14788.11PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X4 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR001876Znf_RanBP2
IPR001876Znf_RanBP2
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0008270zinc ion binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G21350.3CSPI05G21350.3mRNA
CSPI05G21350.2CSPI05G21350.2mRNA
CSPI05G21350.1CSPI05G21350.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeGENE3DG3DSA:4.10.1060.10coord: 19..53
score: 3.6
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 22..44
score: 9.
IPR001876Zinc finger, RanBP2-typeunknownSSF90209Ran binding protein zinc finger-likecoord: 16..54
score: 7.6
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 1..186
score: 5.5E
NoneNo IPR availablePANTHERPTHR23111:SF35SUBFAMILY NOT NAMEDcoord: 1..186
score: 5.5E