CSPI05G21350 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTTGCGCTCATTCACGCTACGAAACGGCGTTCGTACTCCCCAATTACCCGACGAGCATCGCCGTTCCCCACTGAAGAAAAGATTCACGCAGCTATTCCCAGTTCAGAACAAGATCTCTCCGTCATCGTCTTTCTCATACGTCGCAACATGTCTCAGGTCTGCTCACTCTTTTGATTGTATATTGTTTTGTTTTCTCCAAGATTTCGTGGTCTTATTTCCTTAAACCCTAGAAAATCATTGTTAATTATTTATTATCGTTGAATGGAGCATAGTTTGCATCCCGTTGTTCTTCAAGGGATTGGTTTAGAATGATATGTGCCAATTCATCGTAGTCTGGATGATACTTAGTCTCTATTCGATCTGCTTGCGCATTTCTGTCTGTCTTTGTTGTCTCTCTCCGTACGATTTTTTTGTTTCGCATTCAGGTAGGAATTGCGAGATACTTCCGGAGAATTTTGAGTTTGAGAATCTCACTTGAGTTATCCTGGTTTTGAATTAATGGATCCTTTAGTTGTGGAAAATAATTATTTAATCTTCTCTCCTTTTTTTTTTTTTTTTTCTGTGTATTGTACAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTATGTATAGGAAACAGGTTTCCTTTGTAATTCAGTTATGGTTTAATGTTTGATGTAATTCATTCATTATTACGCATGTACATTGGATTTGTAAATGTAATCATTACTTATTATTAGATTTTTTGAGTGAATGCACAATAACGAAACTGAATCTGTTGACATTTGAGTCTTGTGAGATTTCATGTACTCGACATCGTTTGCCGTTAGTTTGCACTTCCTTCTTCTTTTTCTTATTTTAATTTTTACTTTAGTCTACAGCATGTCATAAAGAGTGGGCTCATCTGTGTAGGTCTGTTTACTTGTTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGGTAAGACATGAATGATGTCCCTAGGGAGACTTAGTTATTGCATTTATTTATTTACTCTTCATTTTTTGCAATTAGCAGCATATTCTGGAGTTCATTATGTTTTGCAATTTCAAGTTGCTACCGATTATTAACTACTTTTCATTAAAAAAAAAACTGATTATAAACTACTTGAGCTTTATGGAGTTTATTGAAAGTTTTAGGTTTAGGTTCTCCTTGATCAGTCTCTCTACACTTCTTATACATTTCTTTCATAAAATAAAAGTTGGGTTTTAACCTTCGACATCACCACCATACACTCAAAGTTGAGCACCATATTCTCTTGATGAACGATTAACCTTACTTGAGCTTTCTCTCTCCAGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTATGTTCCCTTTCTTTTTCTGCTCATATTTTTTCAAATAAGAAACTGAATTAAAGGATACACAAGGGTGCATATTCTCCCACACAAGAGGAGCCCAAACCTACTAATATGGTCTCCAATCCAAAAGAATAATACCTATTAGATATTACATGCTCGCATTTCTTTGTGATTCTTATTTAATACATCATATTATTCTGCCTATAACTTAAAATCCATTTATCTTCCACAAGTATTTTATGAGAAGTGGGTGCTGTTTTGATCAATCGTCCATTTATCTGTTTATTTGGTTTCTTTCTTGTTTCCATAGGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGTAGGTCTTTCAATAGTCAATTTTTGATTCGGTGGCTCATCAGGTTTTTTTGGAGTATTAAGTTCGGTGTACAATTTTAAATCTTTTGGTTTGCTGCAGATATAAAATTTTAGAAAGAAGTGCATTATATATCACGTTACTTTATTCAGTTTAGTTTTGAAAATATGTTTTACTAATACACTAACAAAGAAGTGTAATGTTTTTTTTTTAATTTTTTTTTATTAAAGAAATGATTTTCACTGCTTTGAATGTTGAAGGGTCATATCTTTCCTCTTTGAATGGATATTAAACCTGGATATAAACAAAATGATTTTATTGCCTGAAGTTTTTGTGGATAATTCCTAACGTTTTTTACTGCGGGTCTCAACTATGAACAATGTAGTTGGTTTTCCATAAATCTATCTGAAGGCAATTTGTATTACCGTCCTGTCTATCTCACCATTTATGTAAAATTTATGAGCAAAATAAATTTTCCAGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGAAATTTTTTATCATCTAATTTCTTACTTATGCTCACCCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGTCTGTCAAGCTATTTTCTTAAGAGCGAATGTTTTTCTTCATGCCTGGCATGTTTCTGTATGCATAACTCCCTTGTGTAAAATTTTAAGTTCACTTGATTTTTTTTGCAATTTTAACAATTTTATTTTATTTTGAATTGCAGGCTTCTAAAAATGACAAAAGTTCTAGTAAGTTGAATATAATGGCCCTTTCCATCAGAACCCATTCCCTTTTCGAAATTCTTGAAACTTTCATGATTTCTTGATTTCTAACGTACTTGTCAATGCCTTGCAGAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGGTCTGTTGTATGAGTTTATGTATCTCTGTGTGTTTGCAATTGCTTGTGCTTTTGTTCATATATGTATGCATTATGAAGTGGATTCCATACAATTTAATTAACAAGATAATTAATGAATCACATGAAAAAGGGAACCGGAACCCTTTCGGTATGTTGTCTGTGGTTCTGGTGCTTTCGTTGTGTATACCCGTTTCTTTTCTTTTTTTTTCTCTTTTTCTTGATTCTGTTTTGTTTCTCCCATTCATGCATTAATTTGTCATTGTGTGTACTGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCTGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTTAGTGGTACTGGTCTTTTCACTCAATTTAATGCACTATACAATACATATGATCTGGCAAAAGATTTCATGGTTGGTTTCTGATATTAGGGAACATTGAATCCACTTTTTTAGTCTAGTGGGCCTGTTAATTTGTGCACTAAAATATGTTATGAGTAGACTAAACTGTGCCCTTTTGGGTTACGGTTTGATCTCTTCATTGTCTTTTGTGCTGTTGTGTTGGGTGTGTGTGTGTGCGCGCGCCAAACTGATAGTTTTTCTAGGACAGGGTCCCAAAGTTGAAAGGATGCATTGAATTAGATAGGACTTTGACCCTTATTTGGTGGGGTCACGTCCCACATTCATTATGGTCGTCAAAAGTAATGGTTGCCTTCCCAAATGGAGTTTGAAATTGAGGGAATGACTTAGGTTAGATTAAATGTTGTTAGATTAAATGCCTAGAGC ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGA ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGA
BLAST of CSPI05G21350 vs. Swiss-Prot
Match: YZR3_ARATH (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 2.2e-119 Identity = 210/290 (72.41%), Postives = 235/290 (81.03%), Query Frame = 1
BLAST of CSPI05G21350 vs. TrEMBL
Match: A0A0A0KPV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1) HSP 1 Score: 589.3 bits (1518), Expect = 2.4e-165 Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of CSPI05G21350 vs. TrEMBL
Match: M5XVW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1) HSP 1 Score: 535.8 bits (1379), Expect = 3.2e-149 Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1
BLAST of CSPI05G21350 vs. TrEMBL
Match: A0A067GQ84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 2.8e-145 Identity = 248/286 (86.71%), Postives = 266/286 (93.01%), Query Frame = 1
BLAST of CSPI05G21350 vs. TrEMBL
Match: A0A067H2U2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 2.8e-145 Identity = 248/286 (86.71%), Postives = 266/286 (93.01%), Query Frame = 1
BLAST of CSPI05G21350 vs. TrEMBL
Match: U5GTH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13880g PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 4.8e-145 Identity = 245/285 (85.96%), Postives = 268/285 (94.04%), Query Frame = 1
BLAST of CSPI05G21350 vs. TAIR10
Match: AT1G67325.2 (AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein) HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-120 Identity = 210/290 (72.41%), Postives = 235/290 (81.03%), Query Frame = 1
BLAST of CSPI05G21350 vs. TAIR10
Match: AT1G50300.1 (AT1G50300.1 TBP-associated factor 15) HSP 1 Score: 49.3 bits (116), Expect = 4.6e-06 Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 1
BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|449435091|ref|XP_004135329.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus]) HSP 1 Score: 589.3 bits (1518), Expect = 3.5e-165 Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|645230954|ref|XP_008222171.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume]) HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149 Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1
BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|596128412|ref|XP_007222106.1| (hypothetical protein PRUPE_ppa009603mg [Prunus persica]) HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149 Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1
BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|645230960|ref|XP_008222174.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume]) HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149 Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1
BLAST of CSPI05G21350 vs. NCBI nr
Match: gi|645230958|ref|XP_008222173.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X4 [Prunus mume]) HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147 Identity = 252/286 (88.11%), Postives = 269/286 (94.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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