CSPI05G21350.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G21350.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RanBP2-type zinc finger protein
Location	Chr5 : 22111481 .. 22115587 (-)
Sequence length	858

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTGCGCTCATTCACGCTACGAAACGGCGTTCGTACTCCCCAATTACCCGACGAGCATCGCCGTTCCCCACTGAAGAAAAGATTCACGCAGCTATTCCCAGTTCAGAACAAGATCTCTCCGTCATCGTCTTTCTCATACGTCGCAACATGTCTCAGGTCTGCTCACTCTTTTGATTGTATATTGTTTTGTTTTCTCCAAGATTTCGTGGTCTTATTTCCTTAAACCCTAGAAAATCATTGTTAATTATTTATTATCGTTGAATGGAGCATAGTTTGCATCCCGTTGTTCTTCAAGGGATTGGTTTAGAATGATATGTGCCAATTCATCGTAGTCTGGATGATACTTAGTCTCTATTCGATCTGCTTGCGCATTTCTGTCTGTCTTTGTTGTCTCTCTCCGTACGATTTTTTTGTTTCGCATTCAGGTAGGAATTGCGAGATACTTCCGGAGAATTTTGAGTTTGAGAATCTCACTTGAGTTATCCTGGTTTTGAATTAATGGATCCTTTAGTTGTGGAAAATAATTATTTAATCTTCTCTCCTTTTTTTTTTTTTTTTTCTGTGTATTGTACAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTATGTATAGGAAACAGGTTTCCTTTGTAATTCAGTTATGGTTTAATGTTTGATGTAATTCATTCATTATTACGCATGTACATTGGATTTGTAAATGTAATCATTACTTATTATTAGATTTTTTGAGTGAATGCACAATAACGAAACTGAATCTGTTGACATTTGAGTCTTGTGAGATTTCATGTACTCGACATCGTTTGCCGTTAGTTTGCACTTCCTTCTTCTTTTTCTTATTTTAATTTTTACTTTAGTCTACAGCATGTCATAAAGAGTGGGCTCATCTGTGTAGGTCTGTTTACTTGTTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGGTAAGACATGAATGATGTCCCTAGGGAGACTTAGTTATTGCATTTATTTATTTACTCTTCATTTTTTGCAATTAGCAGCATATTCTGGAGTTCATTATGTTTTGCAATTTCAAGTTGCTACCGATTATTAACTACTTTTCATTAAAAAAAAAACTGATTATAAACTACTTGAGCTTTATGGAGTTTATTGAAAGTTTTAGGTTTAGGTTCTCCTTGATCAGTCTCTCTACACTTCTTATACATTTCTTTCATAAAATAAAAGTTGGGTTTTAACCTTCGACATCACCACCATACACTCAAAGTTGAGCACCATATTCTCTTGATGAACGATTAACCTTACTTGAGCTTTCTCTCTCCAGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTATGTTCCCTTTCTTTTTCTGCTCATATTTTTTCAAATAAGAAACTGAATTAAAGGATACACAAGGGTGCATATTCTCCCACACAAGAGGAGCCCAAACCTACTAATATGGTCTCCAATCCAAAAGAATAATACCTATTAGATATTACATGCTCGCATTTCTTTGTGATTCTTATTTAATACATCATATTATTCTGCCTATAACTTAAAATCCATTTATCTTCCACAAGTATTTTATGAGAAGTGGGTGCTGTTTTGATCAATCGTCCATTTATCTGTTTATTTGGTTTCTTTCTTGTTTCCATAGGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGTAGGTCTTTCAATAGTCAATTTTTGATTCGGTGGCTCATCAGGTTTTTTTGGAGTATTAAGTTCGGTGTACAATTTTAAATCTTTTGGTTTGCTGCAGATATAAAATTTTAGAAAGAAGTGCATTATATATCACGTTACTTTATTCAGTTTAGTTTTGAAAATATGTTTTACTAATACACTAACAAAGAAGTGTAATGTTTTTTTTTTAATTTTTTTTTATTAAAGAAATGATTTTCACTGCTTTGAATGTTGAAGGGTCATATCTTTCCTCTTTGAATGGATATTAAACCTGGATATAAACAAAATGATTTTATTGCCTGAAGTTTTTGTGGATAATTCCTAACGTTTTTTACTGCGGGTCTCAACTATGAACAATGTAGTTGGTTTTCCATAAATCTATCTGAAGGCAATTTGTATTACCGTCCTGTCTATCTCACCATTTATGTAAAATTTATGAGCAAAATAAATTTTCCAGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGAAATTTTTTATCATCTAATTTCTTACTTATGCTCACCCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGTCTGTCAAGCTATTTTCTTAAGAGCGAATGTTTTTCTTCATGCCTGGCATGTTTCTGTATGCATAACTCCCTTGTGTAAAATTTTAAGTTCACTTGATTTTTTTTGCAATTTTAACAATTTTATTTTATTTTGAATTGCAGGCTTCTAAAAATGACAAAAGTTCTAGTAAGTTGAATATAATGGCCCTTTCCATCAGAACCCATTCCCTTTTCGAAATTCTTGAAACTTTCATGATTTCTTGATTTCTAACGTACTTGTCAATGCCTTGCAGAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGGTCTGTTGTATGAGTTTATGTATCTCTGTGTGTTTGCAATTGCTTGTGCTTTTGTTCATATATGTATGCATTATGAAGTGGATTCCATACAATTTAATTAACAAGATAATTAATGAATCACATGAAAAAGGGAACCGGAACCCTTTCGGTATGTTGTCTGTGGTTCTGGTGCTTTCGTTGTGTATACCCGTTTCTTTTCTTTTTTTTTCTCTTTTTCTTGATTCTGTTTTGTTTCTCCCATTCATGCATTAATTTGTCATTGTGTGTACTGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCTGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTTAGTGGTACTGGTCTTTTCACTCAATTTAATGCACTATACAATACATATGATCTGGCAAAAGATTTCATGGTTGGTTTCTGATATTAGGGAACATTGAATCCACTTTTTTAGTCTAGTGGGCCTGTTAATTTGTGCACTAAAATATGTTATGAGTAGACTAAACTGTGCCCTTTTGGGTTACGGTTTGATCTCTTCATTGTCTTTTGTGCTGTTGTGTTGGGTGTGTGTGTGTGCGCGCGCCAAACTGATAGTTTTTCTAGGACAGGGTCCCAAAGTTGAAAGGATGCATTGAATTAGATAGGACTTTGACCCTTATTTGGTGGGGTCACGTCCCACATTCATTATGGTCGTCAAAAGTAATGGTTGCCTTCCCAAATGGAGTTTGAAATTGAGGGAATGACTTAGGTTAGATTAAATGTTGTTAGATTAAATGCCTAGAGC

mRNA sequence

ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGCTTCTAAAAATGACAAAAGTTCTAAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGTGA

Coding sequence (CDS)

ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTACTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCAAATATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGCTTCTAAAAATGACAAAAGTTCTAAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGTGA

Homology

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BLAST of CSPI05G21350.1 vs. Swiss-Prot
Match: YZR3_ARATH (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.2e-119
Identity = 210/290 (72.41%), Postives = 235/290 (81.03%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGS++PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

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BLAST of CSPI05G21350.1 vs. TrEMBL
Match: A0A0A0KPV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 2.4e-165
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

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BLAST of CSPI05G21350.1 vs. TrEMBL
Match: M5XVW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 3.2e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of CSPI05G21350.1 vs. TrEMBL
Match: A0A067GQ84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.8e-145
Identity = 248/286 (86.71%), Postives = 266/286 (93.01%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNSK A
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNSKPA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQ YS SAPY+GSGAPSSMY G+PPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGI-PPIMDRYGMALPMGPGAMGPRPGFF 180
           SR SAGSPYRPLH+SGP PYS GSMMGN  +YG+ PP+MDRYG+ LPMGP AMGPRPGFF
Sbjct: 121 SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPAAMGPRPGFF 180

Query: 181 PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 240
           PD+ SQ+KGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+K+DK+SKQK P
Sbjct: 181 PDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KS SP  EEN+Q
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

[Close]

BLAST of CSPI05G21350.1 vs. TrEMBL
Match: A0A067H2U2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.8e-145
Identity = 248/286 (86.71%), Postives = 266/286 (93.01%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNSK A
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNSKPA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQ YS SAPY+GSGAPSSMY G+PPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGI-PPIMDRYGMALPMGPGAMGPRPGFF 180
           SR SAGSPYRPLH+SGP PYS GSMMGN  +YG+ PP+MDRYG+ LPMGP AMGPRPGFF
Sbjct: 121 SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPAAMGPRPGFF 180

Query: 181 PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 240
           PD+ SQ+KGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+K+DK+SKQK P
Sbjct: 181 PDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KS SP  EEN+Q
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

[Close]

BLAST of CSPI05G21350.1 vs. TrEMBL
Match: U5GTH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13880g PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.8e-145
Identity = 245/285 (85.96%), Postives = 268/285 (94.04%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADH SKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHISKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQGYS SAPY+GSGAPSSMY GVPPYGSS+FNGS+IPPYDVPF+GGSAYHYNYG
Sbjct: 61  AKPLQAPQGYS-SAPYLGSGAPSSMYMGVPPYGSSLFNGSSIPPYDVPFTGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLH+SGP PYS GSMMGN  +Y +PP+MDRYG+ +PMGP AMGPRPGFFP
Sbjct: 121 SRLSGGSPYRPLHISGPPPYSGGSMMGNGGMYAMPPLMDRYGLGMPMGPAAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D++SQKKG+D +RDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +K+DK+SKQK PE
Sbjct: 181 DDISQKKGSDASRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQVAKSDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGA+KPAES+KSPSPA +E+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGAEKPAESKKSPSPAPDEDDQ 284

[Close]

BLAST of CSPI05G21350.1 vs. TAIR10
Match: AT1G67325.2 (AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-120
Identity = 210/290 (72.41%), Postives = 235/290 (81.03%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGS++PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of CSPI05G21350.1 vs. TAIR10
Match: AT1G50300.1 (AT1G50300.1 TBP-associated factor 15)

HSP 1 Score: 49.3 bits (116), Expect = 4.6e-06
Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 1


Query: 168 GPGAMGPRPGFFPDEMSQKKGADTTR--DNDWACPKCGNINFSFRTVCNMRKCNTPKPG 225
           G GA G  PG       Q  GA T     NDWACP CGN+N++ R  CN+  CNT KPG
Sbjct: 182 GGGADGGAPG------KQPSGAPTGLFGPNDWACPMCGNVNWAKRLKCNI--CNTNKPG 232

[Close]

BLAST of CSPI05G21350.1 vs. NCBI nr
Match: gi|449435091|ref|XP_004135329.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 3.5e-165
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of CSPI05G21350.1 vs. NCBI nr
Match: gi|645230954|ref|XP_008222171.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume])

HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of CSPI05G21350.1 vs. NCBI nr
Match: gi|596128412|ref|XP_007222106.1| (hypothetical protein PRUPE_ppa009603mg [Prunus persica])

HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of CSPI05G21350.1 vs. NCBI nr
Match: gi|645230960|ref|XP_008222174.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume])

HSP 1 Score: 535.8 bits (1379), Expect = 4.6e-149
Identity = 252/285 (88.42%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of CSPI05G21350.1 vs. NCBI nr
Match: gi|645230958|ref|XP_008222173.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X4 [Prunus mume])

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 252/286 (88.11%), Postives = 269/286 (94.06%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSNIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGS+IPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQKTP 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGS QA+KNDK+SKQK P
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQQAAKNDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 286

The following BLAST results are available for this feature:

BLAST of CSPI05G21350.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YZR3_ARATH	2.2e-119	72.41	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 P...	[more]

BLAST of CSPI05G21350.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPV4_CUCSA	2.4e-165	99.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1	[more]
M5XVW4_PRUPE	3.2e-149	88.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1	[more]
A0A067GQ84_CITSI	2.8e-145	86.71	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1	[more]
A0A067H2U2_CITSI	2.8e-145	86.71	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1	[more]
U5GTH4_POPTR	4.8e-145	85.96	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13880g PE=4 SV=1	[more]

BLAST of CSPI05G21350.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67325.2	1.3e-120	72.41	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G50300.1	4.6e-06	49.15	TBP-associated factor 15	[more]

BLAST of CSPI05G21350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435091\|ref\|XP_004135329.1\|	3.5e-165	99.65	PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus]	[more]
gi\|645230954\|ref\|XP_008222171.1\|	4.6e-149	88.42	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume]	[more]
gi\|596128412\|ref\|XP_007222106.1\|	4.6e-149	88.42	hypothetical protein PRUPE_ppa009603mg [Prunus persica]	[more]
gi\|645230960\|ref\|XP_008222174.1\|	4.6e-149	88.42	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume]	[more]
gi\|645230958\|ref\|XP_008222173.1\|	1.1e-147	88.11	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X4 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001876	Znf_RanBP2

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI05G21350	CSPI05G21350	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI05G21350.1	CSPI05G21350.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G21350.1.utr3p1	CSPI05G21350.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G21350.1.cds10	CSPI05G21350.1.cds10	CDS
CSPI05G21350.1.cds9	CSPI05G21350.1.cds9	CDS
CSPI05G21350.1.cds8	CSPI05G21350.1.cds8	CDS
CSPI05G21350.1.cds7	CSPI05G21350.1.cds7	CDS
CSPI05G21350.1.cds6	CSPI05G21350.1.cds6	CDS
CSPI05G21350.1.cds5	CSPI05G21350.1.cds5	CDS
CSPI05G21350.1.cds4	CSPI05G21350.1.cds4	CDS
CSPI05G21350.1.cds3	CSPI05G21350.1.cds3	CDS
CSPI05G21350.1.cds2	CSPI05G21350.1.cds2	CDS
CSPI05G21350.1.cds1	CSPI05G21350.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI05G21350.1.utr5p1	CSPI05G21350.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	GENE3D	G3DSA:4.10.1060.10		coord: 233..271 score: 3.4E-11coord: 19..53 score: 5.8E-13coord: 190..224 score: 2.2
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 239..269 score: 1.4E-6coord: 194..223 score: 9.0E-6coord: 22..44 score: 1.
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 241..267 score: 1.1E-4coord: 195..221 score: 2.0E-4coord: 24..50 score: 0
IPR001876	Zinc finger, RanBP2-type	unknown	SSF90209	Ran binding protein zinc finger-like	coord: 188..225 score: 7.32E-9coord: 233..270 score: 3.73E-6coord: 17..54 score: 1.2
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..285 score: 1.2E
None	No IPR available	PANTHER	PTHR23111:SF35	SUBFAMILY NOT NAMED	coord: 1..285 score: 1.2E