Cp4.1LG01g16140 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g16140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RanBP2-type zinc finger protein
Location	Cp4.1LG01 : 9909388 .. 9914227 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCTAACGAAACGTGTGTCCATTTTAGCTACACACGGTGTTCGTATTCCTTCCCACCCGACGAACATCTTCCTTCCCGACTGAAAAAAAAAAAAAAAAATTCACGCAGCTATTCCGAGTCCAAGAACAAGATCTCCCTGTCCTCGCCTTTCTGATAGGTCGCAATATGTCGCAGGTCCGTTCACTCACTTCTTTGTCTCGTTAATTGTTTGTTGCTTTATTTTCTGTAAGATCTTGAGGCATTGCTTCCTTAAGCCCTAGTAAATCTTTGTTAATTATTTGATGTCGATGATTGGAAGCTTAATTGCACTGCGTTAGTCCTTAATATATGGAGTTAGAATGAAATTGGCCAATTTTCTACAGTCTGGATGATACTTAGTTTCTGTTTGATCTATTTGTGCATCTTTTTTTGTTATTCCGTACGAGTGCTATGTTTCGAATTGGAGCAGAAATTTCGAGATACTTCTGGAGAATTTGAGTTTGAGATGCTCACACTAGTTCTCCTTGTTTTGAACAGATGCATCCATTAGTTGTGAAATGATTTATTTATTCTTCTATCTCTTTGTTTCCTCTGTCTTATACAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTATGTATTGGCGCCACTGTTTCCTTTGTAATTTAGTTATGGCTTCATATTTAATCATGCACGCTTTCACAACTACGTTGCCTTTGTAAATTTAATTATTATAAGATCTTTTGAGTGAATGCATGAGGCCTACCAGTAATCGAAGTTAACTTTATTGATATCCGAGTCTTGAGAGATTTCCAGTATTCGGCATTGTTTCCGTTGATTAGGCGCTTCTTTTTCTCCTCTCTCGCTGTCTCTGTCTGTCTCATTATTATTATTTTAAATTTTTACTGTCCTAGTCCACAGAATGTCAAAAAAAAAATCGGCTCCTCTTTTGATCTGTTTATTTGTTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGATTGGACTTGCCCTAGTTGTGGAAATGTCAATTTTTCGTTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCTGCTGATCATAACTCTGTAAGACATGAATGAGCCCCTAAGGAAACTTGAATTGTCGTGTTTTTGATTTGCAAAACCTATTTTTGTCTACTCTTGGAGTTAATAATCGAGATGAAACTTTATTATGCGTCCTCTCTTTGTTCATCTTAGCGCTGTGTTTTATATGCACTCAGTCATGTACTGCATACATGGCAGAGGATGCGTTCATCAATTTTTTTTATGCACAATCTGTAACTAAAATGTGCACACATTTTATTCCTTTTAGTTGTCTTTTGTGAAGGAACATTTTATTTCAAGTGTTCTTGTCATCTTTCATTTACTTTTTATTTTTGGCAGCTTATTGGGAGTTCTATTGTTTCTGTTTTGCATTTTTAGGTTGTAATTATGTATTGCATTCAAGAAATTTTTGTAATTATGGTTTAGGATGTGCATTTTCTCTCGCATCACAACTGATTATTAACTACTTTAGCTTCATGAAGTTGGACTTTATTCAATTTTTTAGGTTTAGGTTCTTCTTGGGTATACTCTCTCCAAGAGCACTTGTAATTGTGATTTTGGGTTCATTTTTTCCAGTTACATGTAACATCACTTGGCCAGTCTCTACACCTCTTATACGTTTCTTTCATTAAGAAAAGTTTGTCTATTAACCCTCCACATTACCACCAATCACACAAAGTTGAACTCTGCTGCCAAGTTTATTCAAGTTGGACTTTATTCAAGTTTTCTTGATGAACAAACAGCCTGACTTGAGCTTTCTGTCTCTCCAGAAATCTGCTGCCAAGCCCGTTCAAGCACTTCAGGGTTACTCTTATTCTGCCCCTTACATGGGTTCAGGTGTACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCCATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGTCCCTATAGACCCTTGCACCTATCTGGGCCTCCACCTTATTCAAGTGGATCTATGATGGGAAATAGTATGTTCCATTTCTTCTTTGCTCACATTTGTTTGTGATTTTTTTAATAAGGAACCGAACTTTCATTGAGAAGGGCATAGAAAAAGACATCCCACACAAGAGGTACACAAACCTACAAAAATGGTCTCCATTCCAAAAGAACAACTATTAGACATTATATGCTCACATTTGTTCGTGGTTCTTATTTATTACATCATATTGTTCAGTCTATGTTGAACTTCATTTTTCATGTCTTCCACAAGTACTCTATGAGAAGTCCATGCTGTGGTGATCGATCTATTATTTATCTATTTATTTTGTTTCCTTGTTTTCATAGGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGCACCATGGTAGGTCATTTGATAGTCAACTATCTCCCCTCAAACAACAATATTCAACATCCATAGAGATATTAACGATGATAAGTTTCCATGGAAATATTGAGAAAGGGAATCGTTAAATCTTTTTGGTTTACTGAAGATAAGAAATTAAATAAAGGATTTCATCATATCACATTGCCATATTCACCTTGATTTTCAAAATCTTTTATAATAATACACTAACAAAGGTATTACAAAGATAGTTATGATTGAATATTCTAGAGAAATATTTGCCCATCGGAATGGATATTAAAGCAGGATAGCAACAAAACGTTTTTGTGGACAAAGAATAAAAGCTTACTCCCACAGAATTTCAACTATGTAGGTTTTCGATGAATCTATCTTAAGGTAGTTTCTATTCTTTTTTTATGTCGTGGTGTTCTTGATTGATTGAGTTTTCACATTTCTGTTCTGTCCATTTCACCATTTATATAAAATTTATGAGCTAGTATATTTTACAGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGGTTGCCATTCTTTACTTGCTTGTATCTGCTGCCTTTGATGTACTTGCTTGTTATCTGCTGCCTATGACCAATGATGATGGAAAATTTTTATCATCTAACTTCTTACTTATGCTTACCTATAGATGCTACTCGCGACAATGATTGGGCATGCCCGAAATGTGGAAATATCAACTTCTCATTCAGAACTGTCTGTAACATGAGAAAGTGCAATACTCCAAAGCCCGGGTCACAGGTCTGTTAAGCTATTTTCTCATGAATGTATGATTTTCCTGTATGCTTTTATGATGCCACTAGTTACTAAAATATTACTGGCAAACCTTTTGTTTTCAAAGGCTTGTGAACGTTGAGTATCCCATCACATATTTCTGGTCTAACCTTTTCATTTTATTTTGTTCATATATTTTTTAAATGCAGGGTTCCAAAAATGACAAAACTACTAGTAAGTTGAATACATGGACCTGTTCCTCTAGAAGCCGTTTCCTTTTTGAATTTCTTAAGACTAAATGATTTCTAATGTACATGTCTATGATGCCTTCCAGAGCAAAAGACGCCAGAGGGTAGCTGGAAGTGCGAGAAATGTAACAACATAAATTATCCATTCCGAAACAAGTGCAATAGACAAAATTGCGGAGCAGACAAGCCAGCGGGTTCAGAGAAATCTTCATCACCTGCACAGGAAGAAAATGATCAGGTCTGTTGTGTGAGTTTCTGTATCTCTGTGTGTTGTTTGCAATTGATTGTGCTTTTTTTCAGATATGTATGCATTATGAAGTGGATTCCACACAATTTAATTAACAAGATAATTTATGAACCACTTGAAAAGGGATACCCTTTTGGTAAATTCTCGGTGGCAGGGGTACTTTCGCTGTGTATACCTTTTTCTTTATTTAAAATTTGTTTTCCCATTCATGCATTAATTTGTCATTGTGTAATGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTGCTGGTCGTTTCACTCATTTAATGCACCATATCATGATCTGGCAAAAGATTTAATGGTTGGTTTCGACATTTAACTTTGGTATTCACTTATTCAGTCTAGGCGGCCTGTGAATTTGTGCACTTAAAATATGTTGCGAGTAGACTAAACTGCTCCCTTTTGGGTTGCGGTTTGATCTCTTAATTATTTTTGTGCTGTTGGGTGTGCCAAACTGATCCTTCCTTTCTTAGGATGGTCCCAAAGTTCACAGTATGCATTGGATTAGATAGCTTTTACTTCTGGGTTAGCGATGGCCTATTAACTTATGACCCTTTTTCGTGGCGTCACGTCATTAATATGGTCTATAAATTTTGTTAGCATGGTTGCTGTGCATGCATGTTCGTTGACTGTCAAATGTAAGTTAGGTTGCCAAGGCCCAAGGGCAGGTTTCGTCGTCATTGTTCATGGTTTATTTCTCATTTATTATTTGTCCTTGCATGTTCATTGACTGTCTTGAGATGTTCGTGTAGTCATGACACTGGATTATTTCGTTGCCCAACTATTTGAAGTGGGTTTTTACCTTATCACTAGGTAATTTCACTTCTCTTTTTCTTTGGGGTTTGAAGGTTGGGGAAAGTGATTTCCTGTGAATTTGATCATGTATTTAAATCAACGTTAAAAATGGCAGATTTTAAAAGCAAGGTGAGCTTTAC

mRNA sequence

GGGCTAACGAAACGTGTGTCCATTTTAGCTACACACGGTGTTCGTATTCCTTCCCACCCGACGAACATCTTCCTTCCCGACTGAAAAAAAAAAAAAAAAATTCACGCAGCTATTCCGAGTCCAAGAACAAGATCTCCCTGTCCTCGCCTTTCTGATAGGTCGCAATATGTCGCAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGCCCTAGTTGTGGAAATGTCAATTTTTCGTTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCTGCTGATCATAACTCTCCTGACTTGAGCTTTCTGTCTCTCCAGAAATCTGCTGCCAAGCCCGTTCAAGCACTTCAGGGTTACTCTTATTCTGCCCCTTACATGGGTTCAGGTGTACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCCATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGTCCCTATAGACCCTTGCACCTATCTGGGCCTCCACCTTATTCAAGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGCACCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGATGCTACTCGCGACAATGATTGGGCATGCCCGAAATGTGGAAATATCAACTTCTCATTCAGAACTGTCTGTAACATGAGAAAGTGCAATACTCCAAAGCCCGGGTCACAGGGTTCCAAAAATGACAAAACTACTAAGCAAAAGACGCCAGAGGGTAGCTGGAAGTGCGAGAAATGTAACAACATAAATTATCCATTCCGAAACAAGTGCAATAGACAAAATTGCGGAGCAGACAAGCCAGCGGGTTCAGAGAAATCTTCATCACCTGCACAGGAAGAAAATGATCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTGCTGGTCGTTTCACTCATTTAATGCACCATATCATGATCTGGCAAAAGATTTAATGGTTGGTTTCGACATTTAACTTTGGTATTCACTTATTCAGTCTAGGCGGCCTGTGAATTTGTGCACTTAAAATATGTTGCGAGTAGACTAAACTGCTCCCTTTTGGGTTGCGGTTTGATCTCTTAATTATTTTTGTGCTGTTGGGTGTGCCAAACTGATCCTTCCTTTCTTAGGATGGTCCCAAAGTTCACAGTATGCATTGGATTAGATAGCTTTTACTTCTGGGTTAGCGATGGCCTATTAACTTATGACCCTTTTTCGTGGCGTCACGTCATTAATATGGTCTATAAATTTTGTTAGCATGGTTGCTGTGCATGCATGTTCGTTGACTGTCAAATGTAAGTTAGGTTGCCAAGGCCCAAGGGCAGGTTTCGTCGTCATTGTTCATGGTTTATTTCTCATTTATTATTTGTCCTTGCATGTTCATTGACTGTCTTGAGATGTTCGTGTAGTCATGACACTGGATTATTTCGTTGCCCAACTATTTGAAGTGGGTTTTTACCTTATCACTAGGTAATTTCACTTCTCTTTTTCTTTGGGGTTTGAAGGTTGGGGAAAGTGATTTCCTGTGAATTTGATCATGTATTTAAATCAACGTTAAAAATGGCAGATTTTAAAAGCAAGGTGAGCTTTAC

Coding sequence (CDS)

ATGTCGCAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGCCCTAGTTGTGGAAATGTCAATTTTTCGTTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCTGCTGATCATAACTCTCCTGACTTGAGCTTTCTGTCTCTCCAGAAATCTGCTGCCAAGCCCGTTCAAGCACTTCAGGGTTACTCTTATTCTGCCCCTTACATGGGTTCAGGTGTACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCCATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGTCCCTATAGACCCTTGCACCTATCTGGGCCTCCACCTTATTCAAGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGCACCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGATGCTACTCGCGACAATGATTGGGCATGCCCGAAATGTGGAAATATCAACTTCTCATTCAGAACTGTCTGTAACATGAGAAAGTGCAATACTCCAAAGCCCGGGTCACAGGGTTCCAAAAATGACAAAACTACTAAGCAAAAGACGCCAGAGGGTAGCTGGAAGTGCGAGAAATGTAACAACATAAATTATCCATTCCGAAACAAGTGCAATAGACAAAATTGCGGAGCAGACAAGCCAGCGGGTTCAGAGAAATCTTCATCACCTGCACAGGAAGAAAATGATCAGTGA

Protein sequence

MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDLSFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSAVYGMPPIMDRYGMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ

Homology

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BLAST of Cp4.1LG01g16140 vs. Swiss-Prot
Match: YZR3_ARATH (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.2e-112
Identity = 206/299 (68.90%), Postives = 230/299 (76.92%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN    
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNG--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSA KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSG
Sbjct: 61  ------KSAPKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPY-------SSAVYGMPPIMDRYGMALPMGPGT 180
           GS YH+NY SR  AG+ YRPLH+SGPPPY       S  +YGMPP +DRYG+ + MGPG+
Sbjct: 121 GSPYHFNYNSRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGS 180

Query: 181 ---MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QG 240
              M PRP F+PD+ SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS QG
Sbjct: 181 AAAMMPRPRFYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQG 240

Query: 241 SKNDKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAG-SEKSSSPAQEENDQ 288
             +DK +KQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP   S  S S A EENDQ
Sbjct: 241 GSSDKISKQNAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

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BLAST of Cp4.1LG01g16140 vs. TrEMBL
Match: A0A0A0KPV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 2.9e-150
Identity = 265/294 (90.14%), Postives = 269/294 (91.50%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSS-------AVYGMPPIMDRYGMALPMGPGT 180
           GSAYHYNYGSRFSAGSPYRPLHLSGP PYSS       AVYG+PPIMDRYGMALPMGPG 
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGA 180

Query: 181 MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKND 240
           MGPRPGFFPD+MSQKKGAD TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQ SKND
Sbjct: 181 MGPRPGFFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKND 240

Query: 241 KTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           K++KQKTPEGSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQEENDQ
Sbjct: 241 KSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

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BLAST of Cp4.1LG01g16140 vs. TrEMBL
Match: M5XVW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 6.7e-139
Identity = 244/294 (82.99%), Postives = 257/294 (87.41%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKP QA QGYS +APY+GS  PSSMY GVPPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSA-------VYGMPPIMDRYGMALPMGPGT 180
           GSAYHYNYGSR S GSPYRPLHLSGP PYSS        +YGMPP+M+RYG+ LPMGPG 
Sbjct: 121 GSAYHYNYGSRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGP 180

Query: 181 MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKND 240
           MGPRPGF+PDD SQKKGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +KND
Sbjct: 181 MGPRPGFYPDDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKND 240

Query: 241 KTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           K +KQK PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SPA +ENDQ
Sbjct: 241 KNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

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BLAST of Cp4.1LG01g16140 vs. TrEMBL
Match: A0A067H2E6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 3.3e-138
Identity = 240/288 (83.33%), Postives = 255/288 (88.54%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 K AAKP+QA Q YS SAPY+GSG PSSMY G+PPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KPAAKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSAVYGMPP-IMDRYGMALPMGPGTMGPRPG 180
           GSAYHYNYGSR SAGSPYRPLH+SGPPPYS  +YGMPP +MDRYG+ LPMGP  MGPRPG
Sbjct: 121 GSAYHYNYGSRLSAGSPYRPLHMSGPPPYSGGIYGMPPPLMDRYGLGLPMGPAAMGPRPG 180

Query: 181 FFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQK 240
           FFPDD SQ+KGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +K+DK +KQK
Sbjct: 181 FFPDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQK 240

Query: 241 TPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
            PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SP  EEN+Q
Sbjct: 241 MPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 279

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BLAST of Cp4.1LG01g16140 vs. TrEMBL
Match: A0A067GQ84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 4.1e-136
Identity = 240/295 (81.36%), Postives = 255/295 (86.44%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 K AAKP+QA Q YS SAPY+GSG PSSMY G+PPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KPAAKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSA-------VYGMPP-IMDRYGMALPMGPG 180
           GSAYHYNYGSR SAGSPYRPLH+SGPPPYS         +YGMPP +MDRYG+ LPMGP 
Sbjct: 121 GSAYHYNYGSRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPA 180

Query: 181 TMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKN 240
            MGPRPGFFPDD SQ+KGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +K+
Sbjct: 181 AMGPRPGFFPDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKS 240

Query: 241 DKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           DK +KQK PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SP  EEN+Q
Sbjct: 241 DKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

[Close]

BLAST of Cp4.1LG01g16140 vs. TrEMBL
Match: A0A067H2U2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 4.1e-136
Identity = 240/295 (81.36%), Postives = 255/295 (86.44%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 K AAKP+QA Q YS SAPY+GSG PSSMY G+PPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KPAAKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSA-------VYGMPP-IMDRYGMALPMGPG 180
           GSAYHYNYGSR SAGSPYRPLH+SGPPPYS         +YGMPP +MDRYG+ LPMGP 
Sbjct: 121 GSAYHYNYGSRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPA 180

Query: 181 TMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKN 240
            MGPRPGFFPDD SQ+KGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +K+
Sbjct: 181 AMGPRPGFFPDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKS 240

Query: 241 DKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           DK +KQK PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SP  EEN+Q
Sbjct: 241 DKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

[Close]

BLAST of Cp4.1LG01g16140 vs. TAIR10
Match: AT1G67325.2 (AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 407.5 bits (1046), Expect = 6.7e-114
Identity = 206/299 (68.90%), Postives = 230/299 (76.92%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN    
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNG--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSA KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSG
Sbjct: 61  ------KSAPKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPY-------SSAVYGMPPIMDRYGMALPMGPGT 180
           GS YH+NY SR  AG+ YRPLH+SGPPPY       S  +YGMPP +DRYG+ + MGPG+
Sbjct: 121 GSPYHFNYNSRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGS 180

Query: 181 ---MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QG 240
              M PRP F+PD+ SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS QG
Sbjct: 181 AAAMMPRPRFYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQG 240

Query: 241 SKNDKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAG-SEKSSSPAQEENDQ 288
             +DK +KQ  PEGSWKC+ C NINYPFR+KCNRQNCGADKP   S  S S A EENDQ
Sbjct: 241 GSSDKISKQNAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of Cp4.1LG01g16140 vs. TAIR10
Match: AT1G55040.1 (AT1G55040.1 zinc finger (Ran-binding) family protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.7e-06
Identity = 37/126 (29.37%), Postives = 57/126 (45.24%), Query Frame = 1


Query: 157 PPIMDRYGMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCN 216
           PP++ R    +   P T   R G   DD+  KKG       DW CPKC  +NF+  T+C 
Sbjct: 342 PPVIKRAPPKVKQPPPTPKRRVG--RDDVEMKKG-------DWLCPKCDFMNFAKNTIC- 401

Query: 217 MRKCNTPKPGSQGSKNDKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEK 276
             +C+  +P           K++   G W+C +CN +NY     C   +C   +PA +  
Sbjct: 402 -LQCDAKRP-----------KRQLLPGEWECPECNFLNYRRNMAC--FHCDCKRPADAIL 443

Query: 277 SSSPAQ 283
            + P +
Sbjct: 462 ENKPQE 443

[Close]

BLAST of Cp4.1LG01g16140 vs. NCBI nr
Match: gi|449435091|ref|XP_004135329.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus])

HSP 1 Score: 539.3 bits (1388), Expect = 4.2e-150
Identity = 265/294 (90.14%), Postives = 269/294 (91.50%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSS-------AVYGMPPIMDRYGMALPMGPGT 180
           GSAYHYNYGSRFSAGSPYRPLHLSGP PYSS       AVYG+PPIMDRYGMALPMGPG 
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGA 180

Query: 181 MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKND 240
           MGPRPGFFPD+MSQKKGAD TRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQ SKND
Sbjct: 181 MGPRPGFFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKND 240

Query: 241 KTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           K++KQKTPEGSWKCEKCNNINYPFR KCNRQNCGADKPA SEKS SPAQEENDQ
Sbjct: 241 KSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Cp4.1LG01g16140 vs. NCBI nr
Match: gi|645230960|ref|XP_008222174.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume])

HSP 1 Score: 501.5 bits (1290), Expect = 9.7e-139
Identity = 244/294 (82.99%), Postives = 257/294 (87.41%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKP QA QGYS +APY+GS  PSSMY GVPPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSA-------VYGMPPIMDRYGMALPMGPGT 180
           GSAYHYNYGSR S GSPYRPLHLSGP PYSS        +YGMPP+M+RYG+ LPMGPG 
Sbjct: 121 GSAYHYNYGSRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGP 180

Query: 181 MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKND 240
           MGPRPGF+PDD SQKKGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +KND
Sbjct: 181 MGPRPGFYPDDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKND 240

Query: 241 KTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           K +KQK PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SPA +ENDQ
Sbjct: 241 KNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of Cp4.1LG01g16140 vs. NCBI nr
Match: gi|596128412|ref|XP_007222106.1| (hypothetical protein PRUPE_ppa009603mg [Prunus persica])

HSP 1 Score: 501.5 bits (1290), Expect = 9.7e-139
Identity = 244/294 (82.99%), Postives = 257/294 (87.41%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKP QA QGYS +APY+GS  PSSMY GVPPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSA-------VYGMPPIMDRYGMALPMGPGT 180
           GSAYHYNYGSR S GSPYRPLHLSGP PYSS        +YGMPP+M+RYG+ LPMGPG 
Sbjct: 121 GSAYHYNYGSRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGP 180

Query: 181 MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKND 240
           MGPRPGF+PDD SQKKGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +KND
Sbjct: 181 MGPRPGFYPDDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKND 240

Query: 241 KTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           K +KQK PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SPA +ENDQ
Sbjct: 241 KNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of Cp4.1LG01g16140 vs. NCBI nr
Match: gi|645230954|ref|XP_008222171.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume])

HSP 1 Score: 501.5 bits (1290), Expect = 9.7e-139
Identity = 244/294 (82.99%), Postives = 257/294 (87.41%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKP QA QGYS +APY+GS  PSSMY GVPPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSA-------VYGMPPIMDRYGMALPMGPGT 180
           GSAYHYNYGSR S GSPYRPLHLSGP PYSS        +YGMPP+M+RYG+ LPMGPG 
Sbjct: 121 GSAYHYNYGSRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGP 180

Query: 181 MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKND 240
           MGPRPGF+PDD SQKKGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +KND
Sbjct: 181 MGPRPGFYPDDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKND 240

Query: 241 KTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
           K +KQK PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SPA +ENDQ
Sbjct: 241 KNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of Cp4.1LG01g16140 vs. NCBI nr
Match: gi|641863206|gb|KDO81892.1| (hypothetical protein CISIN_1g018310mg [Citrus sinensis])

HSP 1 Score: 499.2 bits (1284), Expect = 4.8e-138
Identity = 240/288 (83.33%), Postives = 255/288 (88.54%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPDL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 K AAKP+QA Q YS SAPY+GSG PSSMY G+PPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KPAAKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSAVYGMPP-IMDRYGMALPMGPGTMGPRPG 180
           GSAYHYNYGSR SAGSPYRPLH+SGPPPYS  +YGMPP +MDRYG+ LPMGP  MGPRPG
Sbjct: 121 GSAYHYNYGSRLSAGSPYRPLHMSGPPPYSGGIYGMPPPLMDRYGLGLPMGPAAMGPRPG 180

Query: 181 FFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQK 240
           FFPDD SQ+KGADATRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +K+DK +KQK
Sbjct: 181 FFPDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQK 240

Query: 241 TPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQ 288
            PEGSWKCEKCNNINYPFR KCNRQNCGADKPA S+KS SP  EEN+Q
Sbjct: 241 MPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 279

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g16140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YZR3_ARATH	1.2e-112	68.90	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 P...	[more]

BLAST of Cp4.1LG01g16140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPV4_CUCSA	2.9e-150	90.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1	[more]
M5XVW4_PRUPE	6.7e-139	82.99	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1	[more]
A0A067H2E6_CITSI	3.3e-138	83.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1	[more]
A0A067GQ84_CITSI	4.1e-136	81.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1	[more]
A0A067H2U2_CITSI	4.1e-136	81.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g16140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67325.2	6.7e-114	68.90	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G55040.1	2.7e-06	29.37	zinc finger (Ran-binding) family protein	[more]

BLAST of Cp4.1LG01g16140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435091\|ref\|XP_004135329.1\|	4.2e-150	90.14	PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus]	[more]
gi\|645230960\|ref\|XP_008222174.1\|	9.7e-139	82.99	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume]	[more]
gi\|596128412\|ref\|XP_007222106.1\|	9.7e-139	82.99	hypothetical protein PRUPE_ppa009603mg [Prunus persica]	[more]
gi\|645230954\|ref\|XP_008222171.1\|	9.7e-139	82.99	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume]	[more]
gi\|641863206\|gb\|KDO81892.1\|	4.8e-138	83.33	hypothetical protein CISIN_1g018310mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001876	Znf_RanBP2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g16140.1	Cp4.1LG01g16140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	GENE3D	G3DSA:4.10.1060.10		coord: 237..273 score: 2.2E-10coord: 19..53 score: 5.8E-13coord: 192..226 score: 2.2
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 196..225 score: 9.0E-6coord: 241..271 score: 3.2E-6coord: 22..44 score: 1.
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 197..223 score: 2.0E-4coord: 24..50 score: 0.014coord: 243..269 score: 3.
IPR001876	Zinc finger, RanBP2-type	unknown	SSF90209	Ran binding protein zinc finger-like	coord: 191..227 score: 8.11E-9coord: 17..54 score: 1.26E-7coord: 236..273 score: 5.
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..287 score: 6.9E
None	No IPR available	PANTHER	PTHR23111:SF35	SUBFAMILY NOT NAMED	coord: 1..287 score: 6.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g16140	Cucsa.075770	Cucumber (Gy14) v1	cgycpeB0123
Cp4.1LG01g16140	CmaCh18G006890	Cucurbita maxima (Rimu)	cmacpeB431
Cp4.1LG01g16140	CmaCh04G018420	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g16140	CmoCh18G006330	Cucurbita moschata (Rifu)	cmocpeB393
Cp4.1LG01g16140	Cla022957	Watermelon (97103) v1	cpewmB463
Cp4.1LG01g16140	Csa5G589330	Cucumber (Chinese Long) v2	cpecuB440
Cp4.1LG01g16140	MELO3C011859	Melon (DHL92) v3.5.1	cpemeB364
Cp4.1LG01g16140	ClCG11G013590	Watermelon (Charleston Gray)	cpewcgB364
Cp4.1LG01g16140	CSPI05G21350	Wild cucumber (PI 183967)	cpecpiB440
Cp4.1LG01g16140	Lsi04G006890	Bottle gourd (USVL1VR-Ls)	cpelsiB353
Cp4.1LG01g16140	MELO3C011859.2	Melon (DHL92) v3.6.1	cpemedB424
Cp4.1LG01g16140	CsaV3_5G030210	Cucumber (Chinese Long) v3	cpecucB0544
Cp4.1LG01g16140	Bhi07G001538	Wax gourd	cpewgoB0555
Cp4.1LG01g16140	Carg24399	Silver-seed gourd	carcpeB0196
Cp4.1LG01g16140	Carg21222	Silver-seed gourd	carcpeB0971

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g16140	Cp4.1LG09g05900	Cucurbita pepo (Zucchini)	cpecpeB033

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g16140	Cucurbita pepo (Zucchini)	cpecpeB406
Cp4.1LG01g16140	Cucurbita maxima (Rimu)	cmacpeB186
Cp4.1LG01g16140	Cucurbita moschata (Rifu)	cmocpeB162
Cp4.1LG01g16140	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g16140	Cucumber (Gy14) v2	cgybcpeB649