Cucsa.075770 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.075770
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RanBP2-type zinc finger protein
Location	scaffold00789 : 382559 .. 386530 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGTTCGTACTCCCCAATTACCCGACGAGCATCGCCGTTCCCCACTGAAGAAAAGATTCACGCAGCTATTCCCAGTTCAGAACAAGATCTCTCCGTCATCGTCTTTCTCATACGTCGCAACATGTCTCAGGTCTGCTCACTCTCTTGATTGTATATTGTTTTGTTTTCTCCAAGATTTCGAGGTCCTATTTCCTTAAACCCTAGAAAATCATTGTTAATTATTTATTATCGTTGAATGGAGCATAGTTTGCATCCTGTTGTTCTTCAAGGGATTGGTTTAGAATGATATGTGCCAATTCATCGTAGTCTGGATGATACTTAGTCTCTATTCGATCTACTTGCGCATTTCTGTCTGTCTTTGTTGTCTCTCTCCGTACGATTTTTTtGTTTCGCATTCAGGTAGGAATTGCGAGATACTTAGGAGAATTTTGAGTTTGAGAATCTCACTTGAGTTATCCTGGTTTTGAATTAATGGATCCTTTAGTTGTGGAAAATAATTATTTAATCTCCTCTCCTTTTTTTTTTttAATTTtCTGTGTATTGTACAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTATGTATAGGCAACAGGTTTCCTTTGTAATTCAGTTATGGTTTAATGTTTGATGTAATTCATTCATTATTACGCATGTACATTGGATTTGTAAATGTAATCATTACTTATTATTAGATTTTTTGAGTGAATGCACAATAACGAAATTGAATCTGTTGACATTTGAGTCTTGTGAGATTTCATGTACTCGACATCGTTTGCCGTTAGTTTGCACTTCCTTCTTCTTTATCTTATTTCATATTTTACTTTAGTCTACAGCATGTCATAAAGAGTGGGCTCATCTGTGTAGGTCTGTTTACTTGTTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGGTAAGACATGAATGATGTCCCTAGGGAGACTTTAGTTATTGCATTTATTTATTTACTCTTCATTTTTTGCAATTAGCAGCATATTCTGGAGTTCATTATGTTTTGCAATTTCAAGTTGCTACCGATTATTAACTACTTTTCATTAAAAAAAAACTGATTATTCACTACTTGAGCTTTATGGAGTTTATTGAAAGTTTTAGGTTTAGGTTCTTCTTGTTGTACTCTCTCCAAGAGCTCTTGTAACTATGATCTTGGGTTCACTTTCGCCAGTTACTTATAACATTCCTTGACCAGTCTCTCTACACTTCTTATACATTTCTTTCATAAAATAAAAGTTAGGTTTTAACCTTCGACATCACCACCATACACTCAAAGTTGAACACCATATTCTCTTGATGAACGATTAACCTTACTTGAGCTTTCTCTCTCCAGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTATTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTATGTTCCCTTTCTTTTTCTGCTCATATTTTTtCAAATAAGAAACTGAATTAAAGGATATACAAGGGTGCATATTCTCCCACACAAGAGGAGCCCAAAGCTACTAATATGGTCTCCAATCCAAAAGAATAATACCTATTAGATATTACATGTTCGCATTTCTTTGTGATTCTTATTTAATACATCATATTATTCTCCCTATAACTTAAAATCCATTTATCTTCCACAAGTATTTTATGAGAAGTGGGTGCTGTTTTGATCAATCGTCTATTTATCTGTTTATTTGGTTTCTTTCTTGTTTCCATAGGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGTAGGTCTTTCAATAGTCAATTTTTGATTCGGTGGCTCATCAGGTTTTTTTGGAGTATTAAGTTCGGTGTACAATTTTAAATCTTTTGGTTTGCTGCAGATATAAAATTTTAGAAAGAAGTGCATTATATATCACTTTACTTTATTCAGTTTAGTTTTGAAAATATGTTTTACTAATACACTAACAAAGAAGTGTAATGTTTTTTTtAAAGAAATGATTTTCACTGCTTTGAATGTTGAAGGGTCATATCTTTCCTCTTTGAATGGATATTAAACCTGGATGTAAACAAAATGATTTTATTGCCTGAAGTTTTCGTGGATAATCCTAACGTTTTTTACTGCGGGTCTCAACCATGAACAATGTAGTTGGTTTTCCATAAATCTATCTGAAGGCAATTTGTATTGCCGTCCTGTCTATCTCACCATTTATGTAAAATTTATGAGCAAAATGAATTTTCCAGGGTCCAAGGCCAGGTTTTTTtCCAGATGAAATGTCTCAGAAGAAGGGTGCAGGTTATCATTCTTTATTTGCTTGTTATCTGCTATCTTTGGTCAACCTTAATTGTGATTGAAATTTTTTATCATCTAATTTCTTACTTGTGCTCACCCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGTCTGTCAAGCTATTTTCTTAAGAGTGAATGTTTTTCTTCATGCCTGGCATATTTCTGTATGCATAACTCCCTTGTGTAAAATTTTAAGTTCACTTGATTTTTTTTGCAATTTTAACAATTTTATTTTATTTTGAATTGCAGGCTTCTAAAAATGACAAAAGTTCTAGTAAGTTGAATATAATGGCCCTTTTCCATCAGAACCCATTTCCTTTTCGAAATTCTTGAAACTTTCATGATTTCTTGATTGCTAACGTACTTGTCAATGCCTTGCAGAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGGTCTGTTGTATGAGTTTATGTATCTCTGTGTGTTTGCAATTGCTTGTGCTTTTGTTCGTATATGTATGCATTATGAAGTGGATTCCATACAATTTAATTAACAAGATAATTAATGAATCACATGAAAAAGGGAACCGGAACCCTTTCGGTATGTTGTCTGTGGTTCTGGTGCTTTCGTTGTGTATACCCGTTTCTTTTCTTTTTTTTTtCTCTTTTTCTTGATTCTGTTTTGTTTTTCCCATTCATGCATTAATTTGTCATTGTGTGTACTGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCTGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTTAGTGGTACTGGTCTTTTCACTCAATTTAATGCACTATACAATACATATGATCTGGCAAAAGATTTCATGGTTGGTTTCTGATATTAGGGAACATTGAATCCACTTTTTTAGTCTAGTGGGCCTGTTAATTTGTGCACTAAAATATGTTATGAGTAGACTAAACTGTGCCCTTTTGGGTTACGGTTTGATCTCTTCATTGTCTTTTGTGCTGTTGTGTTGGGTGTGTGTGTGTGCGCGCGCCAAACTGATAGTTTTTCTAGGACAGGGTCCCAAA

mRNA sequence

GGCGTTCGTACTCCCCAATTACCCGACGAGCATCGCCGTTCCCCACTGAAGAAAAGATTCACGCAGCTATTCCCAGTTCAGAACAAGATCTCTCCGTCATCGTCTTTCTCATACGTCGCAACATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTATTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGAAATGTCTCAGAAGAAGGGTGCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGCTTCTAAAAATGACAAAAGTTCTAAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCTGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTTAGTGGTACTGGTCTTTTCACTCAATTTAATGCACTATACAATACATATGATCTGGCAAAAGATTTCATGGTTGGTTTCTGATATTAGGGAACATTGAATCCACTTTTTTAGTCTAGTGGGCCTGTTAATTTGTGCACTAAAATATGTTATGAGTAGACTAAACTGTGCCCTTTTGGGTTACGGTTTGATCTCTTCATTGTCTTTTGTGCTGTTGTGTTGGGTGTGTGTGTGTGCGCGCGCCAAACTGATAGTTTTTCTAGGACAGGGTCCCAAA

Coding sequence (CDS)

ATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCTAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGGAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGCCACGTCCTGCTGATCATAATTCGAAATCTGCTGCCAAACCCGTTCAAGCTCCTCAGGGTTACTCCTATTCTGCACCTTACATGGGTTCGGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCTATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATACCATTACAACTATGGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGACCGTTGCATTTATCTGGGCCTGCACCTTATTCGAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATTCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGTGCCATGGGTCCAAGGCCAGGTTTTTTtCCAGATGAAATGTCTCAGAAGAAGGGTGCAGACACTACTCGTGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTTTGTAACATGAGGAAGTGCAATACACCAAAGCCTGGGTCACAGGCTTCTAAAAATGACAAAAGTTCTAAACAAAAGACTCCAGAGGGTAGCTGGAAGTGTGAGAAGTGTAACAACATAAACTATCCATTCAGAACCAAATGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGAATCAGAGAAATCCCCATCACCGGCACAGGAAGAAAATGATCAGTGA

Protein sequence

MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ*

Homology

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BLAST of Cucsa.075770 vs. Swiss-Prot
Match: YZR3_ARATH (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.2e-127
Identity = 211/290 (72.76%), Postives = 235/290 (81.03%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

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BLAST of Cucsa.075770 vs. TrEMBL
Match: A0A0A0KPV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 1.9e-173
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

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BLAST of Cucsa.075770 vs. TrEMBL
Match: M5XVW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 2.5e-157
Identity = 253/285 (88.77%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

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BLAST of Cucsa.075770 vs. TrEMBL
Match: A0A067GQ84_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 2.1e-153
Identity = 249/286 (87.06%), Postives = 266/286 (93.01%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNSK A
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNSKPA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQ YS SAPY+GSGAPSSMY G+PPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGI-PPIMDRYGMALPMGPGAMGPRPGFF 180
           SR SAGSPYRPLH+SGP PYS GSMMGN  +YG+ PP+MDRYG+ LPMGP AMGPRPGFF
Sbjct: 121 SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPAAMGPRPGFF 180

Query: 181 PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 240
           PD+ SQ+KGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+K+DK+SKQK P
Sbjct: 181 PDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KS SP  EEN+Q
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

[Close]

BLAST of Cucsa.075770 vs. TrEMBL
Match: A0A067H2U2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 2.1e-153
Identity = 249/286 (87.06%), Postives = 266/286 (93.01%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNSK A
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNSKPA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQ YS SAPY+GSGAPSSMY G+PPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGI-PPIMDRYGMALPMGPGAMGPRPGFF 180
           SR SAGSPYRPLH+SGP PYS GSMMGN  +YG+ PP+MDRYG+ LPMGP AMGPRPGFF
Sbjct: 121 SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGIYGMPPPLMDRYGLGLPMGPAAMGPRPGFF 180

Query: 181 PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 240
           PD+ SQ+KGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+K+DK+SKQK P
Sbjct: 181 PDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KS SP  EEN+Q
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSLSPTTEENEQ 286

[Close]

BLAST of Cucsa.075770 vs. TrEMBL
Match: U5GPE0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13880g PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 3.7e-153
Identity = 246/285 (86.32%), Postives = 268/285 (94.04%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADH SKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHISKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQGYS SAPY+GSGAPSSMY GVPPYGSS+FNGSSIPPYDVPF+GGSAYHYNYG
Sbjct: 61  AKPLQAPQGYS-SAPYLGSGAPSSMYMGVPPYGSSLFNGSSIPPYDVPFTGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLH+SGP PYS GSMMGN  +Y +PP+MDRYG+ +PMGP AMGPRPGFFP
Sbjct: 121 SRLSGGSPYRPLHISGPPPYSGGSMMGNGGMYAMPPLMDRYGLGMPMGPAAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D++SQKKG+D +RDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQ +K+DK+SKQK PE
Sbjct: 181 DDISQKKGSDASRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQVAKSDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGA+KPAES+KSPSPA +E+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGAEKPAESKKSPSPAPDEDDQ 284

[Close]

BLAST of Cucsa.075770 vs. TAIR10
Match: AT1G67325.2 (AT1G67325.2 Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 456.4 bits (1173), Expect = 1.3e-128
Identity = 211/290 (72.76%), Postives = 235/290 (81.03%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPG---AMGPRPG 180
           SR  AG+ YRPLH+SGP PY  GSMMG+  +YG+PP +DRYG+ + MGPG   AM PRP 
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQ 240
           F+PDE SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKCNTPKPGS Q   +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAE-SEKSPSPAQEENDQ 286
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP + S  SPS A EENDQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of Cucsa.075770 vs. TAIR10
Match: AT1G55040.1 (AT1G55040.1 zinc finger (Ran-binding) family protein)

HSP 1 Score: 55.5 bits (132), Expect = 6.4e-08
Identity = 35/122 (28.69%), Postives = 52/122 (42.62%), Query Frame = 1


Query: 155 PPIMDRYGMALPMGPGAMGPRPGFFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCN 214
           PP++ R    +   P     R G   D++  KKG       DW CPKC  +NF+  T+C 
Sbjct: 342 PPVIKRAPPKVKQPPPTPKRRVG--RDDVEMKKG-------DWLCPKCDFMNFAKNTIC- 401

Query: 215 MRKCNTPKPGSQASKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEK 274
             +C+  +P           K++   G W+C +CN +NY     C   +C     A  E 
Sbjct: 402 -LQCDAKRP-----------KRQLLPGEWECPECNFLNYRRNMACFHCDCKRPADAILEN 441

Query: 275 SP 277
            P
Sbjct: 462 KP 441

HSP 2 Score: 32.7 bits (73), Expect = 4.5e-01
Identity = 12/36 (33.33%), Postives = 19/36 (52.78%), Query Frame = 1


Query: 16  RTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPR 52
           R D   ++ DW CP C  +NF+  T C   +  +P+
Sbjct: 365 RDDVEMKKGDWLCPKCDFMNFAKNTICLQCDAKRPK 400

[Close]

BLAST of Cucsa.075770 vs. TAIR10
Match: AT2G17975.1 (AT2G17975.1 zinc finger (Ran-binding) family protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07
Identity = 28/76 (36.84%), Postives = 37/76 (48.68%), Query Frame = 1


Query: 193 RDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPEGSWKCEKCNNIN 252
           R+ DW C  C N N++FR+ CN  +C  P+     +    +SK     G W C  C N N
Sbjct: 5   REGDWECLGCRNRNYAFRSFCN--RCKQPRL-IMDNNTSPNSKWLPRIGDWICTGCTNNN 64

Query: 253 YPFRTKCNRQNCGADK 269
           Y  R KC +  CG  K
Sbjct: 65  YASREKCKK--CGQSK 75

HSP 2 Score: 40.8 bits (94), Expect = 1.6e-03
Identity = 19/41 (46.34%), Postives = 23/41 (56.10%), Query Frame = 1


Query: 19 GSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKS 60
          G  RE DW C  C N N++FR+ CN   C QPR    N+ S
Sbjct: 2  GDGREGDWECLGCRNRNYAFRSFCN--RCKQPRLIMDNNTS 40

HSP 3 Score: 39.3 bits (90), Expect = 4.8e-03
Identity = 58/225 (25.78%), Postives = 79/225 (35.11%), Query Frame = 1


Query: 22  REDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPVQAPQGYSYSAPYMGSGA 81
           R  DW C  C N N++ R  C  + C Q +     S + A P  + Q + +   Y   G 
Sbjct: 48  RIGDWICTGCTNNNYASREKC--KKCGQSKEVAALS-ALAIPGASLQTHLH---YFTRGP 107

Query: 82  PSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGS----AYHYNYGSRFSAG--SPYRPLHLS 141
            S   PG     S+  N +S+      +  G        +NY SR      +   PL L 
Sbjct: 108 ESHDQPGSLLAFSNATNQASVHK---EWRSGDWICRCGFHNYSSRIQCKKCNEIAPLALG 167

Query: 142 GPAPYSSG---------------SMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 201
                S                 SM   SA+Y   P     GM+L        P P F  
Sbjct: 168 TKRLASEALAHEWDSKRLNQGYTSMQTQSAIYASFP-----GMSLGRVSNWQLPLP-FLQ 227

Query: 202 DEMSQK---KGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPK 223
              +      G    RD DW C  C N N++ R  CN  +C T +
Sbjct: 228 QHSTPALLGMGVKQWRDGDWMCTNCKNHNYASRAECN--RCKTTR 255

HSP 4 Score: 33.1 bits (74), Expect = 3.4e-01
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1


Query: 240 EGSWKCEKCNNINYPFRTKCNR 262
           +G W C  C N NY  R +CNR
Sbjct: 229 DGDWMCTNCKNHNYASRAECNR 250

[Close]

BLAST of Cucsa.075770 vs. TAIR10
Match: AT1G50300.1 (AT1G50300.1 TBP-associated factor 15)

HSP 1 Score: 51.6 bits (122), Expect = 9.3e-07
Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 1


Query: 168 GPGAMGPRPGFFPDEMSQKKGADTTR--DNDWACPKCGNINFSFRTVCNMRKCNTPKPG 225
           G GA G  PG       Q  GA T     NDWACP CGN+N++ R  CN+  CNT KPG
Sbjct: 182 GGGADGGAPG------KQPSGAPTGLFGPNDWACPMCGNVNWAKRLKCNI--CNTNKPG 232

HSP 2 Score: 40.0 bits (92), Expect = 2.8e-03
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 1


Query: 24  DDWTCPSCGNVNFSFRTTCNMRNCTQP 51
           +DW CP CGNVN++ R  CN+ N  +P
Sbjct: 205 NDWACPMCGNVNWAKRLKCNICNTNKP 231

[Close]

BLAST of Cucsa.075770 vs. NCBI nr
Match: gi|449435091|ref|XP_004135329.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus])

HSP 1 Score: 616.3 bits (1588), Expect = 2.7e-173
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Cucsa.075770 vs. NCBI nr
Match: gi|645230954|ref|XP_008222171.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume])

HSP 1 Score: 562.8 bits (1449), Expect = 3.5e-157
Identity = 253/285 (88.77%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of Cucsa.075770 vs. NCBI nr
Match: gi|596128412|ref|XP_007222106.1| (hypothetical protein PRUPE_ppa009603mg [Prunus persica])

HSP 1 Score: 562.8 bits (1449), Expect = 3.5e-157
Identity = 253/285 (88.77%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of Cucsa.075770 vs. NCBI nr
Match: gi|645230960|ref|XP_008222174.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume])

HSP 1 Score: 562.8 bits (1449), Expect = 3.5e-157
Identity = 253/285 (88.77%), Postives = 269/285 (94.39%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGSQA+KNDK+SKQK PE
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKNDKNSKQKMPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           GSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 285

[Close]

BLAST of Cucsa.075770 vs. NCBI nr
Match: gi|645230958|ref|XP_008222173.1| (PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X4 [Prunus mume])

HSP 1 Score: 558.1 bits (1437), Expect = 8.7e-156
Identity = 253/286 (88.46%), Postives = 269/286 (94.06%), Query Frame = 1


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120
           AKP QAPQGYS +APY+GS APSSMY GVPPYGSS+FNGSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180
           SR S GSPYRPLHLSGP PYSSGSM+GN  +YG+PP+M+RYG+ LPMGPG MGPRPGF+P
Sbjct: 121 SRLSTGSPYRPLHLSGPTPYSSGSMIGNGGMYGMPPMMERYGLGLPMGPGPMGPRPGFYP 180

Query: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGS-QASKNDKSSKQKTP 240
           D+ SQKKGAD TRDNDW CPKCGNINFSFRTVCNMRKCNTPKPGS QA+KNDK+SKQK P
Sbjct: 181 DDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQQAAKNDKNSKQKMP 240

Query: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 286
           EGSWKCEKCNNINYPFRTKCNRQNCGADKPAES+KSPSPA +ENDQ
Sbjct: 241 EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESKKSPSPAPDENDQ 286

The following BLAST results are available for this feature:

BLAST of Cucsa.075770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YZR3_ARATH	2.2e-127	72.76	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana GN=At1g67325 P...	[more]

BLAST of Cucsa.075770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPV4_CUCSA	1.9e-173	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589330 PE=4 SV=1	[more]
M5XVW4_PRUPE	2.5e-157	88.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009603mg PE=4 SV=1	[more]
A0A067GQ84_CITSI	2.1e-153	87.06	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1	[more]
A0A067H2U2_CITSI	2.1e-153	87.06	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018310mg PE=4 SV=1	[more]
U5GPE0_POPTR	3.7e-153	86.32	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13880g PE=4 SV=1	[more]

BLAST of Cucsa.075770 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67325.2	1.3e-128	72.76	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G55040.1	6.4e-08	28.69	zinc finger (Ran-binding) family protein	[more]
AT2G17975.1	1.9e-07	36.84	zinc finger (Ran-binding) family protein	[more]
AT1G50300.1	9.3e-07	49.15	TBP-associated factor 15	[more]

BLAST of Cucsa.075770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435091\|ref\|XP_004135329.1\|	2.7e-173	100.00	PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis sativus]	[more]
gi\|645230954\|ref\|XP_008222171.1\|	3.5e-157	88.77	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X2 [Prunus mume]	[more]
gi\|596128412\|ref\|XP_007222106.1\|	3.5e-157	88.77	hypothetical protein PRUPE_ppa009603mg [Prunus persica]	[more]
gi\|645230960\|ref\|XP_008222174.1\|	3.5e-157	88.77	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X5 [Prunus mume]	[more]
gi\|645230958\|ref\|XP_008222173.1\|	8.7e-156	88.46	PREDICTED: ranBP2-type zinc finger protein At1g67325 isoform X4 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001876	Znf_RanBP2
IPR001876	Znf_RanBP2

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.075770.1	Cucsa.075770.1	mRNA
Cucsa.075770.2	Cucsa.075770.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	GENE3D	G3DSA:4.10.1060.10		coord: 190..224 score: 1.8E-13coord: 19..53 score: 4.5
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 22..44 score: 1.2E-6coord: 194..223 score: 7.
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 195..221 score: 2.0E-4coord: 24..50 score: 0
IPR001876	Zinc finger, RanBP2-type	unknown	SSF90209	Ran binding protein zinc finger-like	coord: 188..225 score: 5.76E-9coord: 17..54 score: 1.0
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..234 score: 6.2E
None	No IPR available	PANTHER	PTHR23111:SF35	SUBFAMILY NOT NAMED	coord: 1..234 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.075770	Cla022957	Watermelon (97103) v1	cgywmB080
Cucsa.075770	Csa5G589330	Cucumber (Chinese Long) v2	cgycuB073
Cucsa.075770	MELO3C011859	Melon (DHL92) v3.5.1	cgymeB077
Cucsa.075770	ClCG11G013590	Watermelon (Charleston Gray)	cgywcgB076
Cucsa.075770	CSPI05G21350	Wild cucumber (PI 183967)	cgycpiB076
Cucsa.075770	CmaCh18G006890	Cucurbita maxima (Rimu)	cgycmaB0125
Cucsa.075770	CmaCh04G018420	Cucurbita maxima (Rimu)	cgycmaB0126
Cucsa.075770	CmoCh18G006330	Cucurbita moschata (Rifu)	cgycmoB0120
Cucsa.075770	Lsi04G006890	Bottle gourd (USVL1VR-Ls)	cgylsiB076
Cucsa.075770	Cp4.1LG09g05900	Cucurbita pepo (Zucchini)	cgycpeB0120
Cucsa.075770	Cp4.1LG01g16140	Cucurbita pepo (Zucchini)	cgycpeB0123
Cucsa.075770	MELO3C011859.2	Melon (DHL92) v3.6.1	cgymedB076
Cucsa.075770	CsaV3_5G030210	Cucumber (Chinese Long) v3	cgycucB076
Cucsa.075770	Cla97C11G219510	Watermelon (97103) v2	cgywmbB072
Cucsa.075770	Bhi07G001538	Wax gourd	cgywgoB087
Cucsa.075770	Carg24399	Silver-seed gourd	carcgyB0166
Cucsa.075770	Carg21222	Silver-seed gourd	carcgyB0772

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.075770	Cucurbita maxima (Rimu)	cgycmaB0123
Cucsa.075770	Cucurbita moschata (Rifu)	cgycmoB0123
Cucsa.075770	Cucurbita moschata (Rifu)	cgycmoB0119
Cucsa.075770	Cucurbita pepo (Zucchini)	cgycpeB0125