Carg24399 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24399
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Zinc finger, RanBP2-type
Location	Cucurbita_argyrosperma_scaffold_293 : 3270 .. 7914 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAACATCTTCCTTCCCGACTGAAAAAAAAAAAAAAAAAAAAAGGATTCACGCAGCTATTCCGAGTCCAAGAACAAGATCTCCCTGTCCTCGCCTTTCTGATAGGTCGCAATATGTCGCAGGTCCGTTCACTCACTTCTTTGTCTCGTTAATTGTTTGTTGCTTTATTTTCTGTAAGATCTTGAGGCATTGCTTCCTTAAGCCCTAGTAAATCTTTGTTAATTATTTGATGTCGATGATTGGAAGCTTAATTGCACTGCGTTATTCCTTAATATATGGAGGTAGAATGAAATTGGCCAATTTTCTACAGGCTGGATGATACTTAGTTTCTGTTTGATCTATTTGTGCATCTTTTTTTGTTATTCCGTACGACTGCTATGTTTCGAATTCGAGCAGAAATTTCGAGATACGTCTGGAGAATTTGAGTTTGAGATGCTCACACTAGTTCTCCTTGTTTTGAACAGATGCATCCATTAGTTGTGAAATGATTTATTTATTCTTCTATGTTTTTGTTTCCTCTATCTTATACAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTATGTATTGGCGCCACTGTTTCCTTTGTAATTTAGTTATGGCTTCATATTTAATCATGCACGCTTTCACAACTACGTTGCCTTTGTAAATTTAATTATTATAAGCTCTTTTGAGTGAATGCACGAGGCCTACCAATAATCGAAGTTAACTTTATTGATATCCAAGTCTTGAGAGTTTCCAGTATTCGGCACTGTTTCCGTTGATTAGGCGCTTCTTTTTCTCCTCTCTCGCTGTCTCTGTCTGTCTCATCATTATTATTTTAAATTTTTACTGTCCTAGTCCACCGAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGGCTCCTCTTTTGATCTGTTTATTTGTTTATTTGTTTGTAGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGAAACGTCAATTTTTCGTTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCTGCTGATCATAACTCTGTAAGACATGAATGAGCCCCTAAGGAAACTTGAATTGTCGTGTTTTTGATTTGCAAAACCTATTTTTGTCTACTCTTGGAGTTAATAATCGAGATGAAACTTTATTATGCGTCCTCTCTTTGTTCATCTTAGCGCTGTGTTTTATATGCACTCAGTCATGTACTGCATACATGGCAGAGGATGCGTTCATCAATTTCTTTTTATGCACTATCTGTAGCTAAAATGTGCACACATTTTATTCCTTTTAGTTGTCTTTTGTGAAGGAACATTTTATTTCAAGTGTTCTTGTCATCTTTCATTTACTTTTTATTTTTGGCAGCTTATCTGGAGTTCTATTGTTTCTGTTTTGCATTTTTAGGTTGTAATTATGTATTGCATTCAAGAAATTTTTGTAATTATGGGTTAGGATGTGCATTTTCTCTCGCATCACAACTGATTATTAACTACTTTAGCTTCATGAAGTTGGACTTTATTCAATTTTTTAGGTTTAGGTTCTTCTTGGGTGTACTCTCTCCAAGAGCACTTGTAATTGTGATTTTGGGTTCATTTTTTCCAGTTACATGTAACATCACTTGGCCAGTCTCTACACCTCTTATACGTTTCTTTCATTAAGAAAAGTTTATCTATTAACCCTCCACATTACCACGAATCACACGAAGTTGAACTCTGCTGCCAAGTTTATTCAAGTTGGACTTTATTCAAGTTTTCTTGATGAACAAACAGCCTTACTTGAGCTTTCTCTCTCTCCAGAAATCTGCTGCCAAGCCCGTTCAAGCACTTCAGGGTTACTCTTATTCTGCCCCTTACATGGGTTCAGGTGTACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCCATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGTCCCTATAGACCCTTGCACCTATCTGGGCCTCCACCTTATTCAAGTGGATCTATGATGGGAAATAGTATGTTCCATTTCTTCTTTGCTCACATTTGTTTGTGATTTTTTTAATAAGGAACCGAACTTTCATTGAGAAGGGCATAGAAAAAGACATCCCACACAAGAGGTACACAAACCTACAAAAATGGTCTCCTTCCAAAAGAACAACTATTCGACATTATATGCTCACATTTGTTCGTGGTTCTTATTTATTACATCATATTGTTCGGTTTATGTTGAACTTCATTTTTCATGTCTTCCACAAGTACTCTATGAGAAGTCCGTGCTGTGGTGATCGATCTGTTATTTATCTATTTATTTTGTTTCCTTGTTTTCATAGGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGCACCATGGTAGGTCATTTGATAGTCAACTATTACCCGGTGGTTCAACAGCTTTTTTTTCCGGAGTTTTAAGTTTGGTGTACTTTTAGCTATAATCTCCCCTCAAACAACAATATTCAACATCCATAGAGATATTAACGATGATAAGTTTCCATGGAAATATTGAGAAAGGAAATCGTTAAATCTTTTTGGTTTACTGAAGATAAGAAATTAAATAAAGGATTTCATCATATCACATTGCAATATTCACCTTGATTTTCAAAATCTGTTATAATAATACACTAACAAATGTATTACAAAGATAGTTATGATTGAATACTCCCACAGAATTTCAACTATGTAGGTTTCCGATGAATCTATCTTAAGGTAGTTTCTATTCTTTTTTTATGTAGTGGTGTTCTTGATTGATTGAGTTTTCACATTTCTGTTCTGTCCATTTCACCATTTATATAAAATTTATGAGCTAGTATATTTTACAGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGGTTGCTATTCTTTACTTGCTTGTATCTGCTGCCTTTGATGTACTTGCTTGTTATCTGCTGCCTATGACCAATGATGATGGAAAATTTTTATCATCTTACTTCTTACTTATGCTTACCTATAGATGCTACTCGCGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTCTGTAACATGAGAAAGTGCAATACTCCAAAGCCCGGGTCACAGGTCTGTTAAGCTATTTTCTCATGAATGTACGATTTTCCTGTATGCTTTTATGATGCCACTAGTTACTAAAATATTATTGGCAAACCTTTTGTTTTCAAAGGCTTGTGAACGTTGAGTATCCCTTCACATATTTCTGGTCTAACCTTTTCATTTTATTTTGTTCATATATTTTTTAAATGCAGGGTTCCAAAAATGACAAAACTACTAGTAAGTTGAATACATGGACCTGTTCCTCTAGAAGCCGTTTCCTTTTCGAATTTCTTAAGAATAAATGTTTTCTAATTTTCATGTCTATGATGCCTTCCAGAGCAAAAGACGCCAGAGGGTAGCTGGAAGTGCGAGAAATGTAACAACATAAATTATCCATTCCGAAACAAGTGCAATAGACAAAATTGCGGAGCAGACAAGCCAGCGGGTTCAGAGAAATCTTCATCACCTGCACAGGAAGAAAATGATCAGGTCTGTTGTGTGAGTTTCTGTATCTCTGTGTGTTGTTTGCAATTGATTGTGCTTTTTTTCAGATATGTATGCATTATGAAGTGGATTCCACACAATTTAATTAACAAGATAATTTATGAACCACTTGAAAAGGGATACCCTTTTGGTAAATTCTCGGTGGCAGGGGTACTTTCGCTGTGTATACCTTTTTCTTTATTTAAAATTTGTTTTCCCATTCATGCATTAATTTGTCATTGTGTAATGTTCCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTGCTGGTCGTTTCACTCATTTAATGCACCATATCATGATCTGGCAAAAGATTTAATGGTTGGTTTCGACATTTAACTTTGGTATTCACTTATTCAGTCTAGGCGGCCTGTGAATTTGTGCACTTAAAATATGTTGCGAGTAGACTAAACTGCTCCCTTTTGGGTTGCGGTTTGATCTCTTAATTATTTTTGTGCTGTTGGGTGTGCCAAACTGATCCTTCCTTTCTTAGGATGGTCCCAAAGTTCACAGTATGCATTGGATTAGATAGCTTTTACTTTTGGGTTAGCTTCGCCTATTAACTTATGACCCTTTTTCGTGGCGTCATGTCATTAATATGGTCTATAAATCTTGTTAGAATGGTTGCTGTGCATGCATGTTCATTGACTGTCAAATGTAAGTTAGGTTGCCAAGGCCCAAGGGCGGTTTTCGTCGTCAATGTTCATGGTTTATTTCTCATTTATTATTTGTCCTTGCATGTTCATTGACTGTCTTGAGATGTTCGTGTAGTCATGACACTGGATTATTTAGTTGCCCAACTTTTT

mRNA sequence

ACGAACATCTTCCTTCCCGACTGAAAAAAAAAAAAAAAAAAAAAGGATTCACGCAGCTATTCCGAGTCCAAGAACAAGATCTCCCTGTCCTCGCCTTTCTGATAGGTCGCAATATGTCGCAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGAAACGTCAATTTTTCGTTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCTGCTGATCATAACTCTCCTTACTTGAGCTTTCTCTCTCTCCAGAAATCTGCTGCCAAGCCCGTTCAAGCACTTCAGGGTTACTCTTATTCTGCCCCTTACATGGGTTCAGGTGTACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCCATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGTCCCTATAGACCCTTGCACCTATCTGGGCCTCCACCTTATTCAAGTGGATCTATGATGGGAAATAGTATGTTCCATTTCTTCTTTGCTCACATTTGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGCACCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGATGCTACTCGCGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTCTGTAACATGAGAAAGTGCAATACTCCAAAGCCCGGGTCACAGGGTTCCAAAAATGACAAAACTACTAAGCAAAAGACGCCAGAGGGTAGCTGGAAGTGCGAGAAATGTAACAACATAAATTATCCATTCCGAAACAAGTGCAATAGACAAAATTGCGGAGCAGACAAGCCAGCGGGTTCAGAGAAATCTTCATCACCTGCACAGGAAGAAAATGATCAGGTCTGTTGTGTGAGTTTCTGTATCTCTGTGTGTTGTTTGCAATTGATTGTGCTTTTTTTCAGATATGTATGCATTATGAAGTGGATTCCACACAATTTAATTAACAAGATAATTTATGAACCACTTGAAAAGGGATACCCTTTTGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTGCTGGTCGTTTCACTCATTTAATGCACCATATCATGATCTGGCAAAAGATTTAATGGTTGGTTTCGACATTTAACTTTGGTATTCACTTATTCAGTCTAGGCGGCCTGTGAATTTGTGCACTTAAAATATGTTGCGAGTAGACTAAACTGCTCCCTTTTGGGTTGCGGTTTGATCTCTTAATTATTTTTGTGCTGTTGGGTGTGCCAAACTGATCCTTCCTTTCTTAGGATGGTCCCAAAGTTCACAGTATGCATTGGATTAGATAGCTTTTACTTTTGGGTTAGCTTCGCCTATTAACTTATGACCCTTTTTCGTGGCGTCATGTCATTAATATGGTCTATAAATCTTGTTAGAATGGTTGCTGTGCATGCATGTTCATTGACTGTCAAATGTAAGTTAGGTTGCCAAGGCCCAAGGGCGGTTTTCGTCGTCAATGTTCATGGTTTATTTCTCATTTATTATTTGTCCTTGCATGTTCATTGACTGTCTTGAGATGTTCGTGTAGTCATGACACTGGATTATTTAGTTGCCCAACTTTTT

Coding sequence (CDS)

ATGTCGCAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGAAACGTCAATTTTTCGTTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCTGCTGATCATAACTCTCCTTACTTGAGCTTTCTCTCTCTCCAGAAATCTGCTGCCAAGCCCGTTCAAGCACTTCAGGGTTACTCTTATTCTGCCCCTTACATGGGTTCAGGTGTACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCCATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGCAGCCGGTTTTCTGCAGGCAGTCCCTATAGACCCTTGCACCTATCTGGGCCTCCACCTTATTCAAGTGGATCTATGATGGGAAATAGTATGTTCCATTTCTTCTTTGCTCACATTTGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGCACCATGGGTCCAAGGCCAGGTTTTTTTCCAGATGATATGTCTCAGAAGAAGGGTGCAGATGCTACTCGCGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCATTTAGAACTGTCTGTAACATGAGAAAGTGCAATACTCCAAAGCCCGGGTCACAGGGTTCCAAAAATGACAAAACTACTAAGCAAAAGACGCCAGAGGGTAGCTGGAAGTGCGAGAAATGTAACAACATAAATTATCCATTCCGAAACAAGTGCAATAGACAAAATTGCGGAGCAGACAAGCCAGCGGGTTCAGAGAAATCTTCATCACCTGCACAGGAAGAAAATGATCAGGTCTGTTGTGTGAGTTTCTGTATCTCTGTGTGTTGTTTGCAATTGATTGTGCTTTTTTTCAGATATGTATGCATTATGAAGTGGATTCCACACAATTTAATTAACAAGATAATTTATGAACCACTTGAAAAGGGATACCCTTTTGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGA

Protein sequence

MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYLSFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRYGMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGSKNDKTTKQKTPEGSWKCEKCNNINYPFRNKCNRQNCGADKPAGSEKSSSPAQEENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPFVSSRTCLRVEKVQSYLPALLNMGV

Homology

[Close]

BLAST of Carg24399 vs. NCBI nr
Match: XP_023518420.1 (ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 579.7 bits (1493), Expect = 7.1e-162
Identity = 333/352 (94.60%), Postives = 333/352 (94.60%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS          AVYGMPPIMDRY
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS----------AVYGMPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE
Sbjct: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300

Query: 301 ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 353
           ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF
Sbjct: 301 ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Carg24399 vs. NCBI nr
Match: XP_022957472.1 (ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita moschata])

HSP 1 Score: 577.4 bits (1487), Expect = 3.5e-161
Identity = 332/352 (94.32%), Postives = 332/352 (94.32%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYGSR SAGSPYRPLHLSGPPPYSSGSMMGNS          AVYGMPPIMDRY
Sbjct: 121 GSAYHYNYGSRLSAGSPYRPLHLSGPPPYSSGSMMGNS----------AVYGMPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE
Sbjct: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300

Query: 301 ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 353
           ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF
Sbjct: 301 ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Carg24399 vs. NCBI nr
Match: XP_022998189.1 (ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita maxima])

HSP 1 Score: 567.8 bits (1462), Expect = 2.8e-158
Identity = 328/352 (93.18%), Postives = 330/352 (93.75%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS          AVYGMPPIMDRY
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS----------AVYGMPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPGT+GPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGTLGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE
Sbjct: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300

Query: 301 ENDQVCCVSFCISVCCLQLIVLFFRYVCIMKWIPHNLINKIIYEPLEKGYPF 353
           ENDQVCCV+FCI V CLQLIVLFFRYVCIMKWI HNLINKIIYEPLEKGYPF
Sbjct: 301 ENDQVCCVNFCIFVFCLQLIVLFFRYVCIMKWISHNLINKIIYEPLEKGYPF 333

[Close]

BLAST of Carg24399 vs. NCBI nr
Match: XP_023518432.1 (ranBP2-type zinc finger protein At1g67325 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.9 bits (1252), Expect = 6.3e-134
Identity = 288/307 (93.81%), Postives = 288/307 (93.81%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS          AVYGMPPIMDRY
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS----------AVYGMPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE
Sbjct: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 288

Query: 301 ENDQVCC 308
           ENDQVCC
Sbjct: 301 ENDQVCC 288

[Close]

BLAST of Carg24399 vs. NCBI nr
Match: XP_022998203.1 (ranBP2-type zinc finger protein At1g67325 isoform X2 [Cucurbita maxima])

HSP 1 Score: 485.7 bits (1249), Expect = 1.4e-133
Identity = 287/307 (93.49%), Postives = 288/307 (93.81%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS          AVYGMPPIMDRY
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNS----------AVYGMPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPGT+GPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGTLGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE
Sbjct: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 288

Query: 301 ENDQVCC 308
           ENDQVCC
Sbjct: 301 ENDQVCC 288

[Close]

BLAST of Carg24399 vs. TAIR10
Match: AT1G67325.2 (Ran BP2/NZF zinc finger-like superfamily protein)

HSP 1 Score: 345.9 bits (886), Expect = 3.1e-95
Identity = 172/255 (67.45%), Postives = 194/255 (76.08%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN    
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNG--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSA KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSG
Sbjct: 61  ------KSAPKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GS YH+NY SR  AG+ YRPLH+SGPPPY  GSMMG+            +YGMPP +DRY
Sbjct: 121 GSPYHFNYNSRMPAGAHYRPLHMSGPPPYHGGSMMGSG----------GMYGMPPPIDRY 180

Query: 181 GMALPMGPGT---MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKC 240
           G+ + MGPG+   M PRP F+PD+ SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKC
Sbjct: 181 GLGMAMGPGSAAAMMPRPRFYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKC 234

Query: 241 NTPKPGS-QGSKNDK 252
           NTPKPGS QG  +DK
Sbjct: 241 NTPKPGSQQGGSSDK 234

[Close]

BLAST of Carg24399 vs. TAIR10
Match: AT1G50300.1 (TBP-associated factor 15)

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 0


Query: 214 NDWACPKCGNINFSFRTVCNMRKCNTPKPG 244
           NDWACP CGN+N++ R  CN+  CNT KPG
Sbjct: 205 NDWACPMCGNVNWAKRLKCNI--CNTNKPG 232

[Close]

BLAST of Carg24399 vs. Swiss-Prot
Match: sp|Q8GZ43|YZR3_ARATH (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.6e-94
Identity = 172/255 (67.45%), Postives = 194/255 (76.08%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQPRPADHN    
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNG--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSA KP+Q  QG+S    Y+GSG P  +Y G  PYGS +FNGSS+PPYDVPFSG
Sbjct: 61  ------KSAPKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GS YH+NY SR  AG+ YRPLH+SGPPPY  GSMMG+            +YGMPP +DRY
Sbjct: 121 GSPYHFNYNSRMPAGAHYRPLHMSGPPPYHGGSMMGSG----------GMYGMPPPIDRY 180

Query: 181 GMALPMGPGT---MGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKC 240
           G+ + MGPG+   M PRP F+PD+ SQK+  D+TRDNDW CP CGN+NFSFRTVCNMRKC
Sbjct: 181 GLGMAMGPGSAAAMMPRPRFYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKC 234

Query: 241 NTPKPGS-QGSKNDK 252
           NTPKPGS QG  +DK
Sbjct: 241 NTPKPGSQQGGSSDK 234

[Close]

BLAST of Carg24399 vs. Swiss-Prot
Match: sp|Q9AST1|TAF15_ARATH (Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.2e-04
Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 0


Query: 214 NDWACPKCGNINFSFRTVCNMRKCNTPKPG 244
           NDWACP CGN+N++ R  CN+  CNT KPG
Sbjct: 205 NDWACPMCGNVNWAKRLKCNI--CNTNKPG 232

[Close]

BLAST of Carg24399 vs. TrEMBL
Match: tr|A0A1S3BE27|A0A1S3BE27_CUCME (ranBP2-type zinc finger protein At1g67325 OS=Cucumis melo OX=3656 GN=LOC103488879 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.0e-125
Identity = 273/304 (89.80%), Postives = 275/304 (90.46%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYGSRFSAGSPYRPLHLSGP PYSSGSMMGNS          AVYG+PPIMDRY
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNS----------AVYGIPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPG MGPRPGFFPD+MSQKKGAD TRDNDWACPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGAMGPRPGFFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPGSQ SKN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S SPAQE
Sbjct: 241 KPGSQASKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPSPAQE 285

Query: 301 ENDQ 305
           ENDQ
Sbjct: 301 ENDQ 285

[Close]

BLAST of Carg24399 vs. TrEMBL
Match: tr|A0A0A0KPV4|A0A0A0KPV4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.0e-125
Identity = 273/304 (89.80%), Postives = 275/304 (90.46%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKPVQA QGYSYSAPYMGSG PSSMYPGVPPYGSSIFNGSSIPPYDVPFSG
Sbjct: 61  ------KSAAKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYGSRFSAGSPYRPLHLSGP PYSSGSMMGNS          AVYG+PPIMDRY
Sbjct: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPAPYSSGSMMGNS----------AVYGIPPIMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           GMALPMGPG MGPRPGFFPD+MSQKKGAD TRDNDWACPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GMALPMGPGAMGPRPGFFPDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPGSQ SKN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S SPAQE
Sbjct: 241 KPGSQASKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPSPAQE 285

Query: 301 ENDQ 305
           ENDQ
Sbjct: 301 ENDQ 285

[Close]

BLAST of Carg24399 vs. TrEMBL
Match: tr|A0A0D2W0E4|A0A0D2W0E4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G176300 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.6e-117
Identity = 272/384 (70.83%), Postives = 301/384 (78.39%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 KSAAKP+QA Q YS SAPY+G G PSSMY GVPPYGSS+FNG SIPPY+ PFSG
Sbjct: 61  ------KSAAKPLQAPQNYSSSAPYVGPGAPSSMYMGVPPYGSSLFNGPSIPPYEAPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDRY 180
           GSAYHYNYG+R   GSP++PLH+SGPPPYSSGSM+GN            +YGMPP+MDRY
Sbjct: 121 GSAYHYNYGNRLPGGSPFQPLHMSGPPPYSSGSMIGNG----------GMYGMPPLMDRY 180

Query: 181 GMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNTP 240
           G+ LPMGP  MGPRPGFFPDD  QKKGADATRDNDW CPKCGNINFSFRTVCNMRKCNTP
Sbjct: 181 GLGLPMGPPPMGPRPGFFPDDKLQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNTP 240

Query: 241 KPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQE 300
           KPG Q +K DK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  S SP   
Sbjct: 241 KPGPQAAKQDKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKSPSPTVN 300

Query: 301 ENDQVCCVS---FCISVCCLQLIVLFFRYVCI-----MKWIPHNLINKIIYEPLEKGYPF 360
           E+DQV  +    +C+ VC L+L +L  R+V I      ++    L+ ++    L      
Sbjct: 301 ESDQVRVLMHFLYCL-VCYLKLFML-TRFVQIKNAVSFQYFKFFLVKELFELSLLSISLK 360

Query: 361 VSSRTCLRVEKVQSYLPALLNMGV 377
           +S+RTCLRVEKVQS  PALL+MGV
Sbjct: 361 MSTRTCLRVEKVQSRRPALLSMGV 363

[Close]

BLAST of Carg24399 vs. TrEMBL
Match: tr|A0A067GQ84|A0A067GQ84_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g018310mg PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.9e-115
Identity = 260/340 (76.47%), Postives = 277/340 (81.47%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSPYL 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFR TCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRMTCNMRNCTQPRPADHNS--- 60

Query: 61  SFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFSG 120
                 K AAKP+QA Q YS SAPY+GSG PSSMY G+PPYGSS+FNGSSIPPYDVPFSG
Sbjct: 61  ------KPAAKPLQAPQNYSSSAPYVGSGAPSSMYLGMPPYGSSLFNGSSIPPYDVPFSG 120

Query: 121 GSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGM-PPIMDR 180
           GSAYHYNYGSR SAGSPYRPLH+SGPPPYS GSMMGN            +YGM PP+MDR
Sbjct: 121 GSAYHYNYGSRLSAGSPYRPLHMSGPPPYSGGSMMGNG----------GIYGMPPPLMDR 180

Query: 181 YGMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNT 240
           YG+ LPMGP  MGPRPGFFPDD SQ+KGADATRDNDW CPKCGNINFSFRTVCNMRKCNT
Sbjct: 181 YGLGLPMGPAAMGPRPGFFPDDKSQRKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNT 240

Query: 241 PKPGSQGSKNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSPAQ 300
           PKPGSQ +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  S SP  
Sbjct: 241 PKPGSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKSLSPTT 300

Query: 301 EENDQVCCV--SFCISVCCLQLIVLFFRYVCIMKWIPHNL 338
           EEN+QVCCV   FC   CC +L+ L   +V +   I + L
Sbjct: 301 EENEQVCCVIHFFCAPACCSKLLFLSIIFVHVKNSIRNKL 321

[Close]

BLAST of Carg24399 vs. TrEMBL
Match: tr|A0A251R4K9|A0A251R4K9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G225000 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.5e-115
Identity = 205/249 (82.33%), Postives = 217/249 (87.15%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS-PY 60
           MSQVD+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNS   
Sbjct: 1   MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSISR 60

Query: 61  LSFLSLQKSAAKPVQALQGYSYSAPYMGSGVPSSMYPGVPPYGSSIFNGSSIPPYDVPFS 120
            SF+  QKSAAKP QA QGYS +APY+GS  PSSMY GVPPYGSS+FNGSSIPPYDVPFS
Sbjct: 61  SSFVLFQKSAAKPFQAPQGYSSAAPYVGSAAPSSMYLGVPPYGSSLFNGSSIPPYDVPFS 120

Query: 121 GGSAYHYNYGSRFSAGSPYRPLHLSGPPPYSSGSMMGNSMFHFFFAHICAVYGMPPIMDR 180
           GGSAYHYNYGSR S GSPYRPLHLSGP PYSSGSM+GN            +YGMPP+M+R
Sbjct: 121 GGSAYHYNYGSRLSTGSPYRPLHLSGPTPYSSGSMIGNG----------GMYGMPPMMER 180

Query: 181 YGMALPMGPGTMGPRPGFFPDDMSQKKGADATRDNDWACPKCGNINFSFRTVCNMRKCNT 240
           YG+ LPMGPG MGPRPGF+PDD SQKKGADATRDNDW CPKCGNINFSFRTVCNMRKCNT
Sbjct: 181 YGLGLPMGPGPMGPRPGFYPDDKSQKKGADATRDNDWTCPKCGNINFSFRTVCNMRKCNT 239

Query: 241 PKPGSQGSK 249
           PKPGSQ +K
Sbjct: 241 PKPGSQAAK 239

The following BLAST results are available for this feature:

BLAST of Carg24399 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518420.1	7.1e-162	94.60	ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_022957472.1	3.5e-161	94.32	ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita moschata]	[more]
XP_022998189.1	2.8e-158	93.18	ranBP2-type zinc finger protein At1g67325 isoform X1 [Cucurbita maxima]	[more]
XP_023518432.1	6.3e-134	93.81	ranBP2-type zinc finger protein At1g67325 isoform X2 [Cucurbita pepo subsp. pepo...	[more]
XP_022998203.1	1.4e-133	93.49	ranBP2-type zinc finger protein At1g67325 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg24399 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67325.2	3.1e-95	67.45	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G50300.1	1.8e-05	63.33	TBP-associated factor 15	[more]

BLAST of Carg24399 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GZ43\|YZR3_ARATH	5.6e-94	67.45	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
sp\|Q9AST1\|TAF15_ARATH	3.2e-04	63.33	Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Carg24399 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BE27\|A0A1S3BE27_CUCME	6.0e-125	89.80	ranBP2-type zinc finger protein At1g67325 OS=Cucumis melo OX=3656 GN=LOC10348887...	[more]
tr\|A0A0A0KPV4\|A0A0A0KPV4_CUCSA	6.0e-125	89.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1	[more]
tr\|A0A0D2W0E4\|A0A0D2W0E4_GOSRA	1.6e-117	70.83	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G176300 PE=4 ...	[more]
tr\|A0A067GQ84\|A0A067GQ84_CITSI	1.9e-115	76.47	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g018310mg PE=4 SV=1	[more]
tr\|A0A251R4K9\|A0A251R4K9_PRUPE	2.5e-115	82.33	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G225000 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036443	Znf_RanBP2_sf
IPR001876	Znf_RanBP2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24399-RA	Carg24399-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 24..50 e-value: 0.014 score: 24.5 coord: 214..240 e-value: 2.0E-4 score: 30.7 coord: 260..286 e-value: 3.0E-4 score: 30.1
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 258..288 e-value: 4.7E-6 score: 25.7 coord: 22..44 e-value: 2.2E-6 score: 26.8 coord: 213..242 e-value: 1.3E-5 score: 24.3
None	No IPR available	GENE3D	G3DSA:4.10.1060.10		coord: 11..54 e-value: 1.7E-11 score: 45.1 coord: 248..291 e-value: 4.3E-9 score: 37.4 coord: 202..244 e-value: 1.1E-12 score: 48.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..260
None	No IPR available	PANTHER	PTHR23111:SF35	SUBFAMILY NOT NAMED	coord: 1..321
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..321
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	SSF90209	Ran binding protein zinc finger-like	coord: 253..290
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	SSF90209	Ran binding protein zinc finger-like	coord: 208..244
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	SSF90209	Ran binding protein zinc finger-like	coord: 17..54

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24399	Cla022957	Watermelon (97103) v1	carwmB0131
Carg24399	Csa5G589330	Cucumber (Chinese Long) v2	carcuB0148
Carg24399	MELO3C011859	Melon (DHL92) v3.5.1	carmeB0139
Carg24399	ClCG11G013590	Watermelon (Charleston Gray)	carwcgB0131
Carg24399	CSPI05G21350	Wild cucumber (PI 183967)	carcpiB0153
Carg24399	Cucsa.075770	Cucumber (Gy14) v1	carcgyB0166
Carg24399	CmaCh04G018420	Cucurbita maxima (Rimu)	carcmaB0179
Carg24399	CmaCh18G006890	Cucurbita maxima (Rimu)	carcmaB0178
Carg24399	CmoCh18G006330	Cucurbita moschata (Rifu)	carcmoB0186
Carg24399	Lsi04G006890	Bottle gourd (USVL1VR-Ls)	carlsiB122
Carg24399	Cp4.1LG01g16140	Cucurbita pepo (Zucchini)	carcpeB0196
Carg24399	Cp4.1LG09g05900	Cucurbita pepo (Zucchini)	carcpeB0195
Carg24399	MELO3C011859.2	Melon (DHL92) v3.6.1	carmedB0143
Carg24399	CsaV3_5G030210	Cucumber (Chinese Long) v3	carcucB0156
Carg24399	Cla97C11G219510	Watermelon (97103) v2	carwmbB0141

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24399	Carg21222	Silver-seed gourd	carcarB160

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24399	Cucumber (Gy14) v2	carcgybB0146
Carg24399	Cucurbita moschata (Rifu)	carcmoB0187