CSPI04G11190 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G11190
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Superoxide dismutase [Cu-Zn]
Location	Chr4 : 9486450 .. 9492247 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACCAAAAGAGGGGGAATTTTTTTGTTCTTTCTATTTTTTCGAGATCAATACAAAAGACAAAACATACCCATATAAGATTTCAAAGAAGCAGGTAATACGCAACCCGCTCATCGTTCGCTCACCCATTAACCGCTAAAATATTCAGTTAGGCGATAGACTAGTAAAATGGGTGCTCTAAAAGCTGTGGTGCTCATCGCTGGAGGAGATTCCAACGTCAGAGGCACAATCCAGTTCGTCCAAGATTCAAATGGTCAGTTTCTGTATGTGGGTTTTTGTTTGCGATGCTTGTTTGAAGGGTTTTGTGTGGGATGCTTGCGTTTTTGCTTCGTCTGATCCAATTTCTCACAAGGGTTTTGGAGTTTCGAGGTGGGTTTTTATTGTTGATTGATGTTGTGATGAATATGAACAGGGGCAACCCATGTCAATGGAAGAATAAGCGGACTCTCTCCTGGACTCCATGGCTTCCATATCCATGCTCTTGGCGATACCACAAACGGCTGCAACTCCACTGGTAATCCCCCATTCCCTCTCTCTCTCTCTCTGCCATAGATTCATCTCTTTGTGCTGATTGAATAGGCTTTTTGTTTTGCTGGTTTTCTTTTTCTGTTAGGACCTCATTTTAATCCGTTGAAGAAGGACCATGGAAGTCCTGGGGATTCACAACGTCATGTAGGGGATTTGGGGAATATCTATGCAGGTCCAGATGGTTAGTAGAGTTTCTACATTTTGGTTTTAGAATGTTCTTGAGAAACATAGACAGTAGATTTTTCTCTTCCTCTTATGTTTTTGCTCGTTTTGGTACTAAGAAGACGATTTGGTTGGCCACTGTTCGTGCTTCCTTTTGTAGCTTGTGGGGCGAAAGGAACAAACGTCTCTTTAATGATTATTTTTCCTCTTTTACTCGTTTAAACGAAGCATTCTTCCACTCATTTTAGTTTATCCTTTCTAGTCAGTAATTGACTTTCCCTCCTGTAACACCTTGTAATGTGTGGATCTGATTCTTTATCAATGAATTGTTTCTTCTACTAAAAAAAATTGTGACATTGTAGCAGTGGTTTGTTTCAGGGGTTGCTGAAGTTTCCATTTCGGATAGGCTGGTAAGTCTGTTAAATGGATTGTTTGTTTGCCGATCCTTTTAAAGTGCTTCTTATTCAGTGAGTTGTTGTATCGGTCCTGCTTCTTCTTCATTTCGTTAATTGCCTATTGTGTTTATGAGTCGCCTTTTGTCTTTTCAAATGCAATTTATTTTGATTATATAAGTTGTGGATTGTGTTTTTCATTTTGTTTTTCTATTTTGATGTGTAGATTTCACTTAAGGGACCTCATTCGGTAATTGGTCGGGCAGTCGTTGTGCACGCCGATCCTGATGATCTTGGCAAAGGTAAGAGTTTGTTTTGTACTGAGTTTATTCTATTCTACTTCTTAACATCCTGAAGTGGAAAACTTATTCAAAGTAATGCAGTTTCTCCACGCACTCAAAACACCTCGTCCGACTTTATTCGGGTTGATCATAGAATGAGAGTGTGAATTTGTATTGTCAGTCAGAAAGATTGTATTTGAATTATGATTTTATTATTGCTACTCATGTTTATTTCGTCTTTTCACATTTTGGCTTCATGGCTTAATCATGCACACTAAATGCAATAGGTGGGCACGAACTTAGCAAGACAACTGGAAATGCCGGTGCAAGAATCGGATGCGGTTAGTATTTTATCCTCTACACTTGATTTTGGTTTGTCAATATAATAAATCCTTGAAAAGTAGCGGGGTGAAGTCGGATAGATTTGGCTCCAATAATCTATATTTGGTCACATGCCCCACAAAATAGTGAAGGTACAAGTCTCTGACAACACACTTCCGTGTCGTGAAAGGGAGAGTTCATGGGAAGTGAGCAACTGATAACCCCACAATAGGATATCAAGATCCACGTTATGATGCCTGTAAAGGACGCACCATTGCAGCCACAACTCAAAGGAAAAATTCATATGGATGATATTGGGTGTTAGCTCTCCCGAGCAAAATTTTCCTTGTGAAATCTTCACTTTCTTAGGTATCTTAATCTCCACAGGGCTTTTTGTTGAAGGATGCATGAATCATGATAGAAAAGTCATTCCTACTCCAAAGGATGCTCAATTTGGTAAGGTTGAGAAAATATTCACATAAGCTAAGACTAAGAGTAACCAGTAACATTTGAAGGTTGAAACTTGAAATCAAAAAACCTCGACAGTAGGTCTAAATATGGGGAAAACAAAATAATCCAATGATCTGATTAGTTCTTTAGTAGGAACCTTGACTAGTAAGTACCATAAATACCTGGTTCCTGAGAGGAAGACGATCAAATCTCACATGTAACCGCTGTTCTAACGAACCCTTTGGTCTTAGTTGAGGAGGTACTATCTAAAGAAAAACAAAATGTACCAATAACTTAGCGAAAGGATAAAAGAAAATAGAAAAGCTCTAGCGCCTCATCTCTTAGCTTTCCATGTAGAGCATGCGATATTGACATTTTCTTCCAATCAATGACCGGAGAAATTCAACCCGATTAAACTCCCATCAATATAGCCATGCTTACAAAATCAACACTCTTGTCAATGCAATGCCCTTCAACGATGTGATCTATACCATGATATTATTGAAAATGGTTAGGATATTGTTGGACCTCCAATCATTTCGCCTACAAGAGGAAGAAATCAGTGAAGGTTATGATGGGAATTACACTGAAGACCAAGGGTGGGGAGGTTCTTGGGGAGACCCACCCTTGATGAGGTATATAAGGAATGTTTTGGGGATCAGCAAATGAGGTCATATTTGAAGGATTAGCTAAGCATGCGCAGCGGAAAAAGACCACAAATAATATTCTAAATGCAATTGGTTAATACAAGCATAAGCCCTAATTTAAAACGAATTTAGGGTAAATAGTAAACTTACATTCGAAACTCCGATTAGTACTTGAATTTCCGACCGAACTCGAACAGGACCACCGCTAGTGTTAAGGCAGGGGCTTTGACTCCACTATGGTTATAGTGGACAGATTGAGCAAGTTTGCTCACTTCATCACACTTAAACACCTGTTTACTATGAAGCAAGTGGCAGAAGTTTTCATTGAGCGAGTAGTGAGTAAACATGGGATTCCAAAATAATCATCACGGATCGTGACAAAATATTTATGAGTAGTTTTTGGAAAGTGTTGTTCTCAACCATGGGTACCGTACTCAAGAAGCACAACTTTTCATCCTCAAAAAGATGGACAAACCAATCCTTGTTTAGAAACTTACCTTCGTTGTTTATGCACTGAGCAACCAACCAAGTGGAATAAGTGTATTCCTTAGACAAAATTGTGGTACAACACCATGTTTCATGGATCGGCAAAGACCACACTGTTCCAAATTGTCTTTGGAAGAACTCCACCCCCATTAGTGTCTTATGGACATAGGAAGACGACCAATAATAGCACGGAACAGCTGGTGATGGAAAGGGACTTGGTAATTAATACTCTAAAGGAAATTTGGTGATAGCCCAAAATAGAATGAAGAAGCAAGCTGATTTGCATCGAAGAGAGCTGGAATTTAAGGTAGGGGATGAAGTATATTTGAAGTTAAGGCCGTTATCACCAACGTTCGTTAGCACAGATGAAGAGTGGAAAATTAGCACCCAAGTTCTATGGGCCTTACAAAGTGATTGAATCTATTGGGAAAGTGGTGTATAGATTGGACCTACCTCCCAGAGCTTCAATTCACAATGTTTACACAGTTCTCAACCAAAACTTAAGTTGGGACAGACCCAGAAACTGCATCACCTACCACTGGCCTTAACAGAAAAATTTGAGCTGCAGGTGATACCCGAGACAGTCTTGGGAGTCTGATGGAGTAGTGAACTGGGGGCCAATGAGTGGCTGGTGAAGTGGAAAGGATGTATAGAAAGTGAGACTATGTGGGAATCGGTTTATTTGATGAATCAACAGTTTCCCTTGTTCTGAGAACAAGGTACAGGTACACTTCGAACCAAGCGGTATTGTTAGACCTCCAATCATTTACACCTACCAGAGGAAGAAGTTGGGGAAGTGTATGATGGGAATTACAAAAAGGACCAAGGGTGGGGAGTTTCTTGGGGGGACCCACCCTGATGAGGTATGAGGAATATTTTGGGAATTAGCAAAGGTCATATTTTCGGTATAGGCTGTTGAGGTTTTTGAGGAGAAGATTCCAGCCTTCTTGAAGGAGCTGGAGAATAACCTTAGCATTTGTTTCTGTCTTTTCTTTCTTATTTTACTGTGCTGTCCTTTAGAGTATTCTGCTGATATTTTGTAAACTCATTTGGAATTTATCACCAATAGAATCAAAGCAGAGTACCGTTTCTGTTTCCATATTTTTGTTGGAATTTTACTCAGGGAAGGGATCCTAACATATACTTTCTAATAAGAACACTTAAGAAATACAAAGAACACTAAAGATAGAAATATATATTGCAATATCAATGAAAAAACTACAGTATAACATAGCCTCCTTTGAGAGAGTTGGTCTCTCCTAAATTCCCCTTAAAGAAATCCCAAAATTTCGTCACACCCTCCTCTCAATCCTACTCCCTCTGTTTATAACTAAAAGCCTTAACAAATTTACTATCTATGTACTGAAATGCTTCTTCTTATAACCATACTAAAATTCTCCAGTAATCCCACTTTATCTCTAACCAGTGCTCTCACAAAAGTATAATTTCATATTGAACTGACTTAATTAAAAAATTTGCTGTATTACCAGGGCATCGGATATGGATCGTAATTATAGTGAATAATGAATATGTAACTTTTCTTTAATTGGCCTTTGGCACTCCCATAAAGAAGGATTGGCGAATTTAGTGCTCGAGGATCATCCTTTCAAGGTTGAAAGGAAGTTTAATGGTTTGAAATGAACTTAGCTTTTAGTTGGGTCCTTTTGAGTGAATGCCATAATCAACTAAGACTTAAAAGAAGTGTAGAAGCCGAAGTGGGTTTGGCGAAGTGGTATTGGTCATGATCTCCACTCTAGAAGTGGAAGGTTTAATCTAGAGGTTCAACCCACCATGCACGGTTGTTGTTCAGAAAAACATAGAGAAGCATTTTCTTGGTTGTATATTGGTGTAAAAATGATCACATCGTCAGAAGGTTTTCCCCACTGAAGATAGAAAAAAACAACAAAAATCCATTTTTGTTAATCTTGATACTACACTTATGGCTAATTGGAGAATCCTTTTGTAATGATCTTTGATGGGTCCAACCCTTTTATTTCATTTCATCATCCCAACCAACCTCATATATTATAAGCATTTTTCATATCCACCTCTCTTTCATCTTGACACTGGTTTTCAAAAAAGCACTAATTATTATGATAATGATCTCATTTTGGTTTAAAGCTACTGACCCATGTGAGGCCTTTTCGCATTAAAGCCATCTTCCTGTTAGACTCTTGTTCTTTTCATTTGTAGTTTTGTTATCATTTTTTCTTCTTCTTTTCTTGCTTATTGGGCAGGCATTATTGGAATTCAATCTTCTGTCTAAAGGCGATGGTTGAGCTGGAAAAATAAACAAGTAATTGAGAAAGATAATTTGTTATATTCTCTCTCTCTCATTACTTGTTTAGTATTGTAGAACATGCAGTATAATATGAAATTATTAATATCCAAATGTGAAGTGCCAAAGAAGAATCACTCATGGCTTTGAAAGCCATGCCACATGTTATATAAAATACTATAGTTATAAAAGATATGGTATAATTTTGTCACTCAGCCCCCGTTTGTCATTTTTTTTTTCTTTTTGCAAGGAT

mRNA sequence

ATGGGTGCTCTAAAAGCTGTGGTGCTCATCGCTGGAGGAGATTCCAACGTCAGAGGCACAATCCAGTTCGTCCAAGATTCAAATGGGGCAACCCATGTCAATGGAAGAATAAGCGGACTCTCTCCTGGACTCCATGGCTTCCATATCCATGCTCTTGGCGATACCACAAACGGCTGCAACTCCACTGGACCTCATTTTAATCCGTTGAAGAAGGACCATGGAAGTCCTGGGGATTCACAACGTCATGTAGGGGATTTGGGGAATATCTATGCAGGTCCAGATGGGGTTGCTGAAGTTTCCATTTCGGATAGGCTGATTTCACTTAAGGGACCTCATTCGGTAATTGGTCGGGCAGTCGTTGTGCACGCCGATCCTGATGATCTTGGCAAAGGTGGGCACGAACTTAGCAAGACAACTGGAAATGCCGGTGCAAGAATCGGATGCGGCATTATTGGAATTCAATCTTCTGTCTAA

Coding sequence (CDS)

ATGGGTGCTCTAAAAGCTGTGGTGCTCATCGCTGGAGGAGATTCCAACGTCAGAGGCACAATCCAGTTCGTCCAAGATTCAAATGGGGCAACCCATGTCAATGGAAGAATAAGCGGACTCTCTCCTGGACTCCATGGCTTCCATATCCATGCTCTTGGCGATACCACAAACGGCTGCAACTCCACTGGACCTCATTTTAATCCGTTGAAGAAGGACCATGGAAGTCCTGGGGATTCACAACGTCATGTAGGGGATTTGGGGAATATCTATGCAGGTCCAGATGGGGTTGCTGAAGTTTCCATTTCGGATAGGCTGATTTCACTTAAGGGACCTCATTCGGTAATTGGTCGGGCAGTCGTTGTGCACGCCGATCCTGATGATCTTGGCAAAGGTGGGCACGAACTTAGCAAGACAACTGGAAATGCCGGTGCAAGAATCGGATGCGGCATTATTGGAATTCAATCTTCTGTCTAA

Homology

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BLAST of CSPI04G11190 vs. Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-65
Identity = 116/157 (73.89%), Postives = 137/157 (87.26%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MG +KAV +I  G++NV+G++QF+QDS G THV GRI+GL+PGLHGFHIHALGDTTNGCN
Sbjct: 1   MGVIKAVAVI-NGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKKDHG+P D++RH GDLGN+ AG DGVAEVS+ D  I L G HS++GRAVV
Sbjct: 61  STGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHAD DDLG+ GHELSKTTGNAGAR+ CGIIG+Q+SV
Sbjct: 121 VHADQDDLGRTGHELSKTTGNAGARVRCGIIGLQASV 156

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BLAST of CSPI04G11190 vs. Swiss-Prot
Match: SODC3_ARATH (Superoxide dismutase [Cu-Zn] 3 OS=Arabidopsis thaliana GN=CSD3 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-61
Identity = 111/155 (71.61%), Postives = 131/155 (84.52%), Query Frame = 1


Query: 2   GALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNS 61
           G L+AV LIAG D+NVRG +QFVQD +G THV G+ISGLSPG HGFHIH+ GDTTNGC S
Sbjct: 6   GNLRAVALIAG-DNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCIS 65

Query: 62  TGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVVV 121
           TGPHFNPL + HG P + +RH GDLGNI AG +GVAE+ I D+ I L G +S++GRAVVV
Sbjct: 66  TGPHFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVV 125

Query: 122 HADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSS 157
           HADPDDLGKGGH+LSK+TGNAG+R+GCGIIG+QSS
Sbjct: 126 HADPDDLGKGGHKLSKSTGNAGSRVGCGIIGLQSS 159

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BLAST of CSPI04G11190 vs. Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-59
Identity = 105/154 (68.18%), Postives = 126/154 (81.82%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MG LKAVV++ G  ++V+G +QF Q+ +G T V G+ISGLSPGLHGFH+HALGDTTNGC 
Sbjct: 1   MGLLKAVVVLNGA-ADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCM 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPL K+HG+P D  RH GDLGN+  G DG  E SI+D  I L GPHS++GRAVV
Sbjct: 61  STGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQ 155
           VHADPDDLGKGGHELSK+TGNAG R+ CG++G+Q
Sbjct: 121 VHADPDDLGKGGHELSKSTGNAGGRLACGVVGLQ 153

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BLAST of CSPI04G11190 vs. Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-57
Identity = 106/151 (70.20%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 4   LKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTG 63
           +KAV ++AG D  V+GTI F Q+ +G T V G ISGL PGLHGFH+HALGDTTNGC STG
Sbjct: 2   VKAVAVLAGTD--VKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTG 61

Query: 64  PHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVVVHA 123
           PHFNP+ K+HG+P D  RH GDLGN+ AG DGV  V+I+D  I L GPHS+IGRAVVVHA
Sbjct: 62  PHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHA 121

Query: 124 DPDDLGKGGHELSKTTGNAGARIGCGIIGIQ 155
           DPDDLGKGGHELSK+TGNAG R+ CGIIG+Q
Sbjct: 122 DPDDLGKGGHELSKSTGNAGGRVACGIIGLQ 150

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BLAST of CSPI04G11190 vs. Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 5.1e-57
Identity = 105/151 (69.54%), Postives = 121/151 (80.13%), Query Frame = 1


Query: 4   LKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTG 63
           +KAV ++A  +  V+GTI F Q+ +G T V G +SGL PGLHGFH+HALGDTTNGC STG
Sbjct: 2   VKAVAVLASSEG-VKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 61

Query: 64  PHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVVVHA 123
           PHFNP  K+HG+P D  RH GDLGNI AG DGVA V++SD  I L G HS+IGRAVVVHA
Sbjct: 62  PHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHA 121

Query: 124 DPDDLGKGGHELSKTTGNAGARIGCGIIGIQ 155
           DPDDLGKGGHELSKTTGNAG R+ CGIIG+Q
Sbjct: 122 DPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

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BLAST of CSPI04G11190 vs. TrEMBL
Match: A0A0A0KZZ1_CUCSA (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus GN=Csa_4G192040 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.0e-84
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKKDHGSPGDS+RHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV
Sbjct: 61  STGPHFNPLKKDHGSPGDSERHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV
Sbjct: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 157

[Close]

BLAST of CSPI04G11190 vs. TrEMBL
Match: A0A023PRR8_BETPL (CuZn superoxide dismutase (Fragment) OS=Betula platyphylla PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.7e-70
Identity = 126/157 (80.25%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGA KAVVLI+G +SN+RG++QF+++ NGATHV GRI+GLSPGLHGFHIHA GDTTNGCN
Sbjct: 1   MGAPKAVVLISG-NSNIRGSVQFIEEPNGATHVKGRITGLSPGLHGFHIHAFGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKKDHG+P D +RH GDLGNI+AGPDGVAE+SI+D+ I L GPHS++GRAVV
Sbjct: 61  STGPHFNPLKKDHGAPTDKERHAGDLGNIFAGPDGVAEISITDKQILLTGPHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHADPDDLG GGHELSKTTGNAGAR+GCGIIG+QSSV
Sbjct: 121 VHADPDDLGSGGHELSKTTGNAGARVGCGIIGLQSSV 156

[Close]

BLAST of CSPI04G11190 vs. TrEMBL
Match: A0A059DI16_EUCGR (Superoxide dismutase [Cu-Zn] OS=Eucalyptus grandis GN=EUGRSUZ_A02107 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-67
Identity = 127/157 (80.89%), Postives = 140/157 (89.17%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           M  +KAV LI G D++VRG++QF+Q  NGATHV GRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MSGVKAVALIIG-DASVRGSLQFLQQPNGATHVKGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKK+HG+P DS+RH GDLGNI AGPDGVAEVSI D  I L G HS++GRAVV
Sbjct: 61  STGPHFNPLKKNHGAPADSERHAGDLGNIVAGPDGVAEVSIVDVQIPLTGQHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHADPDDLGKGGHELSKTTGNAGAR+GCGIIG+QSSV
Sbjct: 121 VHADPDDLGKGGHELSKTTGNAGARVGCGIIGLQSSV 156

[Close]

BLAST of CSPI04G11190 vs. TrEMBL
Match: Q9AR76_9ROSI (Superoxide dismutase [Cu-Zn] OS=Populus tremula x Populus tremuloides GN=hipI-SOD1 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.7e-67
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 1


Query: 2   GALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNS 61
           G++KAV LI G DSNVRG++ F+Q+ NGATHV GRI+GLSPGLHGFHIHALGDTTNGCNS
Sbjct: 4   GSVKAVALITG-DSNVRGSLHFIQEPNGATHVTGRITGLSPGLHGFHIHALGDTTNGCNS 63

Query: 62  TGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVVV 121
           TGPHFNPLKKDHG+P D++RH GDLGNI AG DGVAEVSI D  I L G HS++GRAVVV
Sbjct: 64  TGPHFNPLKKDHGAPSDNERHAGDLGNITAGSDGVAEVSIKDLQIPLSGMHSILGRAVVV 123

Query: 122 HADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           HADPDDLGKGGHELSKTTGNAGAR+GCGIIG++SSV
Sbjct: 124 HADPDDLGKGGHELSKTTGNAGARVGCGIIGLKSSV 158

[Close]

BLAST of CSPI04G11190 vs. TrEMBL
Match: V5RF26_LITCN (Superoxide dismutase [Cu-Zn] OS=Litchi chinensis GN=Cu PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.2e-67
Identity = 123/154 (79.87%), Postives = 136/154 (88.31%), Query Frame = 1


Query: 4   LKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTG 63
           +KAV +I+ GD+NVRG++ F+Q  NG THV G ISGL PGLHGFHIHALGDTTNGCNSTG
Sbjct: 8   VKAVAVISSGDNNVRGSLHFLQHPNGVTHVKGTISGLKPGLHGFHIHALGDTTNGCNSTG 67

Query: 64  PHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVVVHA 123
           PHFNPLKKDHG+P D++RH GDLGNI AGPDGVA VSISDR I L G HS++GRAVVVHA
Sbjct: 68  PHFNPLKKDHGAPSDTERHAGDLGNIVAGPDGVALVSISDRQIPLSGQHSILGRAVVVHA 127

Query: 124 DPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           DPDDLGKGGHELSKTTGNAG RIGCGIIG+QSSV
Sbjct: 128 DPDDLGKGGHELSKTTGNAGGRIGCGIIGLQSSV 161

[Close]

BLAST of CSPI04G11190 vs. TAIR10
Match: AT5G18100.1 (AT5G18100.1 copper/zinc superoxide dismutase 3)

HSP 1 Score: 235.7 bits (600), Expect = 1.9e-62
Identity = 111/155 (71.61%), Postives = 131/155 (84.52%), Query Frame = 1


Query: 2   GALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNS 61
           G L+AV LIAG D+NVRG +QFVQD +G THV G+ISGLSPG HGFHIH+ GDTTNGC S
Sbjct: 6   GNLRAVALIAG-DNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCIS 65

Query: 62  TGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVVV 121
           TGPHFNPL + HG P + +RH GDLGNI AG +GVAE+ I D+ I L G +S++GRAVVV
Sbjct: 66  TGPHFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVV 125

Query: 122 HADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSS 157
           HADPDDLGKGGH+LSK+TGNAG+R+GCGIIG+QSS
Sbjct: 126 HADPDDLGKGGHKLSKSTGNAGSRVGCGIIGLQSS 159

[Close]

BLAST of CSPI04G11190 vs. TAIR10
Match: AT1G08830.1 (AT1G08830.1 copper/zinc superoxide dismutase 1)

HSP 1 Score: 206.1 bits (523), Expect = 1.6e-53
Identity = 96/147 (65.31%), Postives = 111/147 (75.51%), Query Frame = 1


Query: 8   VLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTGPHFN 67
           V +      V GTI F Q+ +G T V+G +SGL PGLHGFH+HALGDTTNGC STGPHFN
Sbjct: 5   VAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFN 64

Query: 68  PLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVVVHADPDD 127
           P  K HG+P D+ RH GDLGNI  G DG A  +I+D  I L GP+S++GRAVVVHADPDD
Sbjct: 65  PDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADPDD 124

Query: 128 LGKGGHELSKTTGNAGARIGCGIIGIQ 155
           LGKGGHELS  TGNAG R+ CGIIG+Q
Sbjct: 125 LGKGGHELSLATGNAGGRVACGIIGLQ 151

[Close]

BLAST of CSPI04G11190 vs. TAIR10
Match: AT2G28190.1 (AT2G28190.1 copper/zinc superoxide dismutase 2)

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-49
Identity = 93/153 (60.78%), Postives = 108/153 (70.59%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           + A K  V +  G S+V G +   QD +G T VN RI+GL+PG HGFH+H  GDTTNGC 
Sbjct: 61  VSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCI 120

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNP    HG+P D  RH GDLGNI A  DGVAE +I D  I L GP+SV+GRA V
Sbjct: 121 STGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFV 180

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGI 154
           VH   DDLGKGGHELS TTGNAG R+ CG+IG+
Sbjct: 181 VHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213

[Close]

BLAST of CSPI04G11190 vs. NCBI nr
Match: gi|449459610|ref|XP_004147539.1| (PREDICTED: superoxide dismutase [Cu-Zn])

HSP 1 Score: 319.7 bits (818), Expect = 2.9e-84
Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKKDHGSPGDS+RHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV
Sbjct: 61  STGPHFNPLKKDHGSPGDSERHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV
Sbjct: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 157

[Close]

BLAST of CSPI04G11190 vs. NCBI nr
Match: gi|659082705|ref|XP_008441989.1| (PREDICTED: superoxide dismutase [Cu-Zn])

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-81
Identity = 151/157 (96.18%), Postives = 154/157 (98.09%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           M ALKAVVLIAGGDSN+RGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MSALKAVVLIAGGDSNIRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKKDHG PGDS+RHVGDLGNIYAGPDGVAEVSISDRLISLKGPHS+IGRAVV
Sbjct: 61  STGPHFNPLKKDHGGPGDSERHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSIIGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHAD DDLGKGGHELSKTTGNAGARIGCGIIGIQSSV
Sbjct: 121 VHADLDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 157

[Close]

BLAST of CSPI04G11190 vs. NCBI nr
Match: gi|614119714|gb|AHX36945.1| (CuZn superoxide dismutase, partial [Betula platyphylla])

HSP 1 Score: 272.3 bits (695), Expect = 5.2e-70
Identity = 126/157 (80.25%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGA KAVVLI+G +SN+RG++QF+++ NGATHV GRI+GLSPGLHGFHIHA GDTTNGCN
Sbjct: 1   MGAPKAVVLISG-NSNIRGSVQFIEEPNGATHVKGRITGLSPGLHGFHIHAFGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKKDHG+P D +RH GDLGNI+AGPDGVAE+SI+D+ I L GPHS++GRAVV
Sbjct: 61  STGPHFNPLKKDHGAPTDKERHAGDLGNIFAGPDGVAEISITDKQILLTGPHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHADPDDLG GGHELSKTTGNAGAR+GCGIIG+QSSV
Sbjct: 121 VHADPDDLGSGGHELSKTTGNAGARVGCGIIGLQSSV 156

[Close]

BLAST of CSPI04G11190 vs. NCBI nr
Match: gi|1009162302|ref|XP_015899366.1| (PREDICTED: superoxide dismutase [Cu-Zn])

HSP 1 Score: 266.9 bits (681), Expect = 2.2e-68
Identity = 125/157 (79.62%), Postives = 142/157 (90.45%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           M  LKAV LI G DS ++G++QF+Q+ NGATHV+GRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MSTLKAVALIIG-DSGLKGSVQFLQEPNGATHVSGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLK +HG+P D +RH GDLGNI+AG DGVAE+SISDR I L GPHS++GRAVV
Sbjct: 61  STGPHFNPLKMNHGAPSDKERHAGDLGNIFAGSDGVAEISISDRQIPLSGPHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHADPDDLGKGGHELSK+TGNAGAR+GCGIIG+QSSV
Sbjct: 121 VHADPDDLGKGGHELSKSTGNAGARVGCGIIGLQSSV 156

[Close]

BLAST of CSPI04G11190 vs. NCBI nr
Match: gi|697150350|ref|XP_009629378.1| (PREDICTED: superoxide dismutase [Cu-Zn])

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 124/157 (78.98%), Postives = 142/157 (90.45%), Query Frame = 1


Query: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGALKAV +I+G +S V+G++QF+Q  NGATHV GRI+GL+PGLHGFHIHALGDTTNGCN
Sbjct: 1   MGALKAVAVISGNNS-VKGSLQFIQQPNGATHVRGRITGLAPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGSPGDSQRHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120
           STGPHFNPLKKDHG+P D  RH GDLGNI AGPDGVAE+SISD LI L G HS++GRAVV
Sbjct: 61  STGPHFNPLKKDHGAPTDDVRHAGDLGNIVAGPDGVAEISISDMLIPLSGVHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158
           VHADPDDLG+GGHELSK+TGNAGAR+GCG+IG+QSSV
Sbjct: 121 VHADPDDLGRGGHELSKSTGNAGARVGCGVIGLQSSV 156

The following BLAST results are available for this feature:

BLAST of CSPI04G11190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SODC2_MESCR	3.0e-65	73.89	Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 ...	[more]
SODC3_ARATH	3.4e-61	71.61	Superoxide dismutase [Cu-Zn] 3 OS=Arabidopsis thaliana GN=CSD3 PE=1 SV=1	[more]
SODC_PINSY	1.9e-59	68.18	Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1	[more]
SODC2_MAIZE	1.0e-57	70.20	Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2	[more]
SODC2_ORYSJ	5.1e-57	69.54	Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV...	[more]

BLAST of CSPI04G11190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZZ1_CUCSA	2.0e-84	99.36	Superoxide dismutase [Cu-Zn] OS=Cucumis sativus GN=Csa_4G192040 PE=3 SV=1	[more]
A0A023PRR8_BETPL	3.7e-70	80.25	CuZn superoxide dismutase (Fragment) OS=Betula platyphylla PE=2 SV=1	[more]
A0A059DI16_EUCGR	1.0e-67	80.89	Superoxide dismutase [Cu-Zn] OS=Eucalyptus grandis GN=EUGRSUZ_A02107 PE=3 SV=1	[more]
Q9AR76_9ROSI	1.7e-67	80.13	Superoxide dismutase [Cu-Zn] OS=Populus tremula x Populus tremuloides GN=hipI-SO...	[more]
V5RF26_LITCN	2.2e-67	79.87	Superoxide dismutase [Cu-Zn] OS=Litchi chinensis GN=Cu PE=2 SV=1	[more]

BLAST of CSPI04G11190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18100.1	1.9e-62	71.61	copper/zinc superoxide dismutase 3	[more]
AT1G08830.1	1.6e-53	65.31	copper/zinc superoxide dismutase 1	[more]
AT2G28190.1	2.4e-49	60.78	copper/zinc superoxide dismutase 2	[more]

BLAST of CSPI04G11190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459610\|ref\|XP_004147539.1\|	2.9e-84	99.36	PREDICTED: superoxide dismutase [Cu-Zn]	[more]
gi\|659082705\|ref\|XP_008441989.1\|	1.0e-81	96.18	PREDICTED: superoxide dismutase [Cu-Zn]	[more]
gi\|614119714\|gb\|AHX36945.1\|	5.2e-70	80.25	CuZn superoxide dismutase, partial [Betula platyphylla]	[more]
gi\|1009162302\|ref\|XP_015899366.1\|	2.2e-68	79.62	PREDICTED: superoxide dismutase [Cu-Zn]	[more]
gi\|697150350\|ref\|XP_009629378.1\|	1.1e-67	78.98	PREDICTED: superoxide dismutase [Cu-Zn]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001424	SOD_Cu_Zn_dom
IPR018152	SOD_Cu/Zn_BS
IPR024134	SOD_Cu/Zn_/chaperone

Vocabulary: **Biological Process**
Term	Definition
GO:0006801	superoxide metabolic process
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0004784	superoxide dismutase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006801	superoxide metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0071486	cellular response to high light intensity
biological_process	GO:0071457	cellular response to ozone
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0071493	cellular response to UV-B
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004784	superoxide dismutase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G11190.1	CSPI04G11190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding domain	PRINTS	PR00068	CUZNDISMTASE	coord: 82..91 score: 1.4E-44coord: 101..123 score: 1.4E-44coord: 126..152 score: 1.4E-44coord: 46..68 score: 1.4
IPR001424	Superoxide dismutase, copper/zinc binding domain	GENE3D	G3DSA:2.60.40.200		coord: 6..155 score: 4.6
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 14..151 score: 7.6
IPR001424	Superoxide dismutase, copper/zinc binding domain	unknown	SSF49329	Cu,Zn superoxide dismutase-like	coord: 6..153 score: 1.96
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 46..56 scor
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00332	SOD_CU_ZN_2	coord: 140..151 scor
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 1..155 score: 3.2E
None	No IPR available	PANTHER	PTHR10003:SF31	SUPEROXIDE DISMUTASE [CU-ZN] 3	coord: 1..155 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G11190	Cla012125	Watermelon (97103) v1	cpiwmB346
CSPI04G11190	Csa4G192040	Cucumber (Chinese Long) v2	cpicuB183
CSPI04G11190	MELO3C008809	Melon (DHL92) v3.5.1	cpimeB323
CSPI04G11190	ClCG04G005370	Watermelon (Charleston Gray)	cpiwcgB317
CSPI04G11190	MELO3C008809.2	Melon (DHL92) v3.6.1	cpimedB314
CSPI04G11190	CsaV3_4G013220	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G11190	Cla97C04G071940	Watermelon (97103) v2	cpiwmbB309
CSPI04G11190	Bhi03G001844	Wax gourd	cpiwgoB408
CSPI04G11190	CmaCh07G011610	Cucurbita maxima (Rimu)	cmacpiB877
CSPI04G11190	CmoCh07G012080	Cucurbita moschata (Rifu)	cmocpiB857
CSPI04G11190	Cp4.1LG19g02010	Cucurbita pepo (Zucchini)	cpecpiB498
CSPI04G11190	CsGy4G010750	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G11190	Carg12602	Silver-seed gourd	carcpiB0314

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G11190	Cucurbita maxima (Rimu)	cmacpiB672
CSPI04G11190	Cucurbita moschata (Rifu)	cmocpiB663
CSPI04G11190	Cucurbita pepo (Zucchini)	cpecpiB073
CSPI04G11190	Cucurbita pepo (Zucchini)	cpecpiB076
CSPI04G11190	Bottle gourd (USVL1VR-Ls)	cpilsiB257
CSPI04G11190	Silver-seed gourd	carcpiB0661