Bhi03G001844 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi03G001844
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Superoxide dismutase [Cu-Zn]
Location	chr3 : 50832121 .. 50837361 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCGTTAGTATAATAATAAGGATAGAAAATCAAACTTTTAATCTCTGAAAGGTGATAATGGTCACTACCGTTGACCTAAGTTCATTTTCAGCTATGTCAATGATATTTACATTATTTTAAGCGGAAAAGACCTCTTTTTTTCCATCCATCTTTTGTCAATATAAAAACAAAACTTACCCATCTTGAACCCAATTTACTAAGCCCCACATAAACAGGTAATAGTAATATACAAACCGTTCATCGTTCGCTCACCCATCCAACCGCTAAATCTTCAGTCAGGCGATAGACTAGCGAAATGGGTGCTCTGAAAGCTGTGGCGCTCATCGCTGGAGATTGCAACATTAGAGGCTCCATCCAGTTCGTCCAAGATTCAAATGGTCTGTTTTTGTATGTGGGTTTTTGTTTGCGATGCTTGTTTGAAGGTTTTTCTGTGCGATGCTTGTGTTTTTGCTTCGTTTGATCCAATTGCTTATAAGGATTTTTGAGTCTCGAGGTGGGTTTTTATTGTTGATTGAAGTTAAGATGAATATGAACAGGAGCGACCCATGTTAATGGAAGAATTAGTGGTCTCTCCCCTGGACTCCATGGCTTCCATATTCATGCTCTTGGCGATACCACAAATGGCTGTAACTCCACTGGTAATCCCCCCGGCCCCCGCCCCCCTCCATAGTTTCACCTCGTTTTGCTGGTTGATTTTCTTTTCCTTTTTCCTGTCAGGGCCTCATTTTAATCCGTTGAAGAAGGACCATGGAGGTCCTAGGGATGCAGAACGTCACGTAGGGGATTTGGGGAATATCTGGGCAGGTCCAGATGGTTAGTAAAGTTTCTATATTTTGGCTTTTGATTTTTTTTTTTTTTTTTTTTAAGTTCTTTTTTAATAAAGAAACAATTAAATTGATAAATAAAATTTGGAGAAAACCCCAAAACACCTATAGTTGATTACAGGAGAGATTGCCAATTGGTAACTAAGAAAGAAGGTAAGGTGTAATGTTTAAATGAATTCTTAATTTGGCACCAAGAAAAATTAGTAAAAAGAACTCATCGAACAAAATTGGAAAAAGAGTCGCGAAAAAGTCGCTGTTTCTATCGCCTTATGATAGCCCGAGAAAGCCCAACCAAATCATCTTCTTAGTACCATCAAAAGGATGATCCACCAACAATGTAGCAAGCAAGAAGATCAATGACGGAATTAGGACACGACATAGAACAACCAAAAGCCTCCAAGATAACATTCCAAAACTTTGACGCAAGAGGGCAATGCATAAACAGATGGTAGGTGATTCGGAATGATGATAACACATAAGACACCGGGAAGGCGATAGAGACATATAAGGCATCTGACACTGTAGACGGTCTGCAGTATTTGTGGCACCCAAAGAAAAATTTTGATCTTCTTCGAATAAGAATCCTTCCAAGTTCCAAATAACATATCAGTAGTTTTGGAATGTTCTTGAGAAACGTAGGCAGTAGCTTTTCCCCTTCCTCGTATGACATTTTAGCAGTGGCTTGTTTCAGGGGTTGCTGAAGTTTCCATTACAGATAGGCTGGTAAGTCTGTTAAACGGATTGCTTATTTCCTGATCCTTTTAGAGTGCTTCTTATTCAGTGAGTTGTTCTATCAGTCCTGTTTCTTGTTCATTTGGTTAATTGCCTGTTGTGCTCATGTGAGCCACTGTTGGCCTTTTCATATGCAATTCATTTCGATGATGTAAGTTGTGGATTGTGGTTTCATTTTGCTCTTCTATTTTGAAGTGTAGATTTCACTTAAGGGACCTCATTCAATACTAGGTCGGGCAGTTGTCGTGCACGCTGATCCTGATGATCTTGGCAAAGGTAAGAGTTCATTTTCGAATATCTTATCTTGTTTCTTGGGCTTAAGTTTATTCTATCCTAACATTGTGAAGTGGAAATCGTATTCAAAGTAATACAGTTTCTTCACACACTCAAAACACCTCCTTACACTTTTTATTCTGTTGATTATAGAATGAGAGTGTGACTTCGTCAGTTGGAAAGATTGTATTTGAATGATGATTTTATTATTGATATTCAAGCTTATTTCGTCCTTTCACATTGTTGACTTTATGGCTAATTGTGTTAAATGCAATAGGCGGGCATGAACTAAGCAAGACGACTGGGAATGCTGGTGCAAGAGTTGGATGCAGTTAGTATTCTAATTCTCTCTACATATTTGGTTTTGGTTTATCAACATAATAAGTCCTCGAAAAACAGTGGGGGTGAGGTAGGTAGATTTGGCACGAATAAAATATATAATAAAATAAAAAATATTTGTTCTACTGCTATAATAGGAAGTGTTATATGATGATGATATGGTCCATCTCTAATGAAATGAAATGATTCAGGTTTGCTTAAATTTAGAAACAACTTTGGTTTGTTTATTTTTGATAAACAACGAATTTCTTTACACAAGGAGATGCTTACAAAAAGAGAAGATTAGCCATGTAACAAATGGATTAGGAGCTTATCCAAAAGCCCTCCAGTTGACTAAAACAAAAAAGATTCGTATATTTGTAATAACAGTAAATGTTAAAAAGGTCCGCCAGTTTCAGGCCAGAACTCTGCTAAGCTCCTGGAAAAAAAAGCCTTCTATTTCTTGTACCCGAAGCTCCTTCAGGTCACATCTATGATGATCAACCCACAAGGAAGGGAAGAAGATCAGTCTTAAATAAAAGATATCACATCACTTGGACACTTAGCATAAGAAAAAGAAAAGGGAAAAAAAAAAAAAACTGTGAGGAGCAAGTGGAAGGACAAAACGAGTAAAGAAATGCTCGGACGAGGATAAGGGTGCATCTATTGAAAATAATTTTTTCCCCTTCCTTTTTGGTGGTGGACTTGGTGGTTATGTTGTTAAGAAACTAACCTTTCATTGAGCGAATTGAAATAAAGTACAAGGGTATATAAAAAACCTGCAAAAGGAGTTCCAACTACTTATAAGAACAGACTCGGGTCCAATAAAAAAAGACCCAATTAATTATTATACAAAAATTGAATCACGAAAGCCCATAAAGAGGCATTAAACCTCATCACTTCCTATACCTCATCCAAAGACCTCTTGATGTCTCTAAATATATTATTCCTCTTGAGCCATATGTCCCACAAAATAATGAAGATACAAGCCTGCATCAACACTCTTCCTTATCGTGAAAGGGAGAGTTCATCACGATCTCTTTAACCATAGACCTAGTTCCCATTACACACCAAATCAACACCAAATGTACTAAAGCAAAGACTCCATATGAAGTGAGCAAACTAATAACCTCACGTAGGTGATCAAGATCGACCTTATGACGCCTGCAAAGGACACACCATTGCAGCCACAACTCGAAGGAAAAATTCATCTGGATGATCTTGGCTGTTAACTCTCCCATGCAAAATTTTTCATGTGAAAAACTTCACTTTCTTAGGTATCTTAAATTCTTAACCTCCATGAGGCTTTCATTGAAGGATTCATGAATCATGATGGCAAAGCCATTCCTACTCCAAAGGGGGCTCAATTTGGTATGGTCAACAAAAGATTCAGATAGCTAAGTCTAAGAGTAGCCAATAACATTTGAAGGTTGAAACTTGAAAGCAAGAAATCAAGAGAAACGTCAGCAGTAGGTACAGATAAGGGGAAAACGATATTATCTAATGATCTACTTAGTTCTTTAGTAGGTGTTACCAGGAAGAACCATAAATACAATGTAGTTCCTGAGAGGAAGACAATCAAATCTCACTTGTAACCTCTATTTGAAGCAACCCTTGAGTCTTAATCCAGGAGGTACTATCTAAAGAAAAAGGAAATTCACTAATCACTGAATGAAAGAGGACAAAAGAAAAACATAACTACAAGTTAGACTATTGGATGTAATACAAAATTTGCAGTACTGCAAGGGCATTGGATATCGATCACAATTATAGTGAATATGTAATTTTCCCTTAATTGGCCTTTAGCTTTCCCTTCCTTAGAGACGGATTGCCTCAATTTAGTGCTCAAGAATCATCCTTTCAAAGATTCAAAAGTTTTGTGGTTGCAAATGAACTTAGGCTTCGTTTGATAATCATTTCGTTTTTTGTTTTTTTGAAAATTAAGCCTATTTCATCCTCATTTTGTATGATAGTTTGCATATTTCTTAAGTACAATGGCTGAATTCTTTACCAAATTCCAAAAACAAAAACAAGTTTTTAAAGGCTACTTTTTTTAGTTTTCAAAATTTGGCTTGGTTTAAAAACCATTGATAAAAAGTAGTTAATAACGGAAGAAATTTGAAGGTAGAAATAGTATCTATAGGCTTATTTTTCAAAAACAAAAAACCAAAAACCAAATGATTACCAAATGCGGGGCCATAGCTTTTATTTGGGCCTTTGGAATGAATGCCATAATCAATTAAGACCAAGAAAACCAAAGAAAACCGTTTCTTGGTCATTTTGTCAGAAAGTTTGAATCCTCCACCCACTAAAGGAAGAAAGAAGGGGGAAAGACTCCTTTTTTTGCAATTACAGCTACTACTCTTATGGCTAATTGGAGAATCTTTTTGTAATCATTCTTGATGGGTCCAACCCTTTTGTTTCATTTCATCATCCCAACCAACCCATATATATATATATATTATAAGCATTTTCTATATCCACCTCTCTTTCATCTTGAGACTGGTTCTTAAAAGCGCTAATTATTATGATAATGATTCTTATTATGGTTTAAAGTCTCTGACCCATGTGAGGCCTTTTCTCATTGGTATTGAAAAGCTATCTTCCCATTACTCTCTTGTTCTTTTCGTTCGTAATTTTGTTATAATTTTTTTTTCTTCTTTCCTTGATTGTTGGGCAGGCATTATTGGAATTCAATCCTCTGTCTAAAGGTTGGCTGTGCTGGAAAAACAAACAAGTGTTCAGAAAGATAATGTGTTATATTCTCTCTCTCTCTCAATTTGTTTCTTTGTTTAGTCTTGTAGCATTTGCAGTTATAATTATCCCAAGCTACAAATAAACATCACTCATGGCTTTGGAAGCTATGGCACATGTTTTATGATACTGTATTCATAAAAAGCTAGGATCACTGGCCCCATTTGTCAAGTTTTGAGATGGGTTTTTGCAAGAATATAAATTTCTTTGCTTGTTTCATGGTTGTTTAAAATGTATATATACGTATATATTGAGTACAAGAACTGAAAATAACTAAAAGGACAAAAGTCCAAACAACTATATGACAACATCACGAGACATAATCAATGTAAACCAAG

mRNA sequence

ATTTCGTTAGTATAATAATAAGGATAGAAAATCAAACTTTTAATCTCTGAAAGGTGATAATGGTCACTACCGTTGACCTAAGTTCATTTTCAGCTATGTCAATGATATTTACATTATTTTAAGCGGAAAAGACCTCTTTTTTTCCATCCATCTTTTGTCAATATAAAAACAAAACTTACCCATCTTGAACCCAATTTACTAAGCCCCACATAAACAGGTAATAGTAATATACAAACCGTTCATCGTTCGCTCACCCATCCAACCGCTAAATCTTCAGTCAGGCGATAGACTAGCGAAATGGGTGCTCTGAAAGCTGTGGCGCTCATCGCTGGAGATTGCAACATTAGAGGCTCCATCCAGTTCGTCCAAGATTCAAATGGAGCGACCCATGTTAATGGAAGAATTAGTGGTCTCTCCCCTGGACTCCATGGCTTCCATATTCATGCTCTTGGCGATACCACAAATGGCTGTAACTCCACTGGGCCTCATTTTAATCCGTTGAAGAAGGACCATGGAGGTCCTAGGGATGCAGAACGTCACGTAGGGGATTTGGGGAATATCTGGGCAGGTCCAGATGGGGTTGCTGAAGTTTCCATTACAGATAGGCTGATTTCACTTAAGGGACCTCATTCAATACTAGGTCGGGCAGTTGTCGTGCACGCTGATCCTGATGATCTTGGCAAAGGCGGGCATGAACTAAGCAAGACGACTGGGAATGCTGGTGCAAGAGTTGGATGCAGCATTATTGGAATTCAATCCTCTGTCTAAAGGTTGGCTGTGCTGGAAAAACAAACAAGTGTTCAGAAAGATAATGTGTTATATTCTCTCTCTCTCTCAATTTGTTTCTTTGTTTAGTCTTGTAGCATTTGCAGTTATAATTATCCCAAGCTACAAATAAACATCACTCATGGCTTTGGAAGCTATGGCACATGTTTTATGATACTGTATTCATAAAAAGCTAGGATCACTGGCCCCATTTGTCAAGTTTTGAGATGGGTTTTTGCAAGAATATAAATTTCTTTGCTTGTTTCATGGTTGTTTAAAATGTATATATACGTATATATTGAGTACAAGAACTGAAAATAACTAAAAGGACAAAAGTCCAAACAACTATATGACAACATCACGAGACATAATCAATGTAAACCAAG

Coding sequence (CDS)

ATGGGTGCTCTGAAAGCTGTGGCGCTCATCGCTGGAGATTGCAACATTAGAGGCTCCATCCAGTTCGTCCAAGATTCAAATGGAGCGACCCATGTTAATGGAAGAATTAGTGGTCTCTCCCCTGGACTCCATGGCTTCCATATTCATGCTCTTGGCGATACCACAAATGGCTGTAACTCCACTGGGCCTCATTTTAATCCGTTGAAGAAGGACCATGGAGGTCCTAGGGATGCAGAACGTCACGTAGGGGATTTGGGGAATATCTGGGCAGGTCCAGATGGGGTTGCTGAAGTTTCCATTACAGATAGGCTGATTTCACTTAAGGGACCTCATTCAATACTAGGTCGGGCAGTTGTCGTGCACGCTGATCCTGATGATCTTGGCAAAGGCGGGCATGAACTAAGCAAGACGACTGGGAATGCTGGTGCAAGAGTTGGATGCAGCATTATTGGAATTCAATCCTCTGTCTAA

Protein sequence

MGALKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV

Homology

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BLAST of Bhi03G001844 vs. Swiss-Prot
Match: sp|O49044|SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC.2 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 9.3e-67
Identity = 120/156 (76.92%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MGALKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNS 60
           MG +KAVA+I G+ N++GS+QF+QDS G THV GRI+GL+PGLHGFHIHALGDTTNGCNS
Sbjct: 1   MGVIKAVAVINGNNNVKGSLQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNS 60

Query: 61  TGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVV 120
           TGPHFNPLKKDHG P D ERH GDLGN+ AG DGVAEVS+ D  I L G HSILGRAVVV
Sbjct: 61  TGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVV 120

Query: 121 HADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           HAD DDLG+ GHELSKTTGNAGARV C IIG+Q+SV
Sbjct: 121 HADQDDLGRTGHELSKTTGNAGARVRCGIIGLQASV 156

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BLAST of Bhi03G001844 vs. Swiss-Prot
Match: sp|Q9FK60|SODC3_ARATH (Superoxide dismutase [Cu-Zn] 3 OS=Arabidopsis thaliana OX=3702 GN=CSD3 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-62
Identity = 114/154 (74.03%), Postives = 130/154 (84.42%), Query Frame = 0


Query: 2   GALKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNST 61
           G L+AVALIAGD N+RG +QFVQD +G THV G+ISGLSPG HGFHIH+ GDTTNGC ST
Sbjct: 6   GNLRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCIST 65

Query: 62  GPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVVH 121
           GPHFNPL + HG P + ERH GDLGNI AG +GVAE+ I D+ I L G +SILGRAVVVH
Sbjct: 66  GPHFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVH 125

Query: 122 ADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSS 156
           ADPDDLGKGGH+LSK+TGNAG+RVGC IIG+QSS
Sbjct: 126 ADPDDLGKGGHKLSKSTGNAGSRVGCGIIGLQSS 159

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BLAST of Bhi03G001844 vs. Swiss-Prot
Match: sp|P24669|SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris OX=3349 GN=SODCC PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-59
Identity = 104/153 (67.97%), Postives = 122/153 (79.74%), Query Frame = 0


Query: 1   MGALKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNS 60
           MG LKAV ++ G  +++G +QF Q+ +G T V G+ISGLSPGLHGFH+HALGDTTNGC S
Sbjct: 1   MGLLKAVVVLNGAADVKGVVQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMS 60

Query: 61  TGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVV 120
           TGPHFNPL K+HG P D  RH GDLGN+  G DG  E SITD  I L GPHSI+GRAVVV
Sbjct: 61  TGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVV 120

Query: 121 HADPDDLGKGGHELSKTTGNAGARVGCSIIGIQ 154
           HADPDDLGKGGHELSK+TGNAG R+ C ++G+Q
Sbjct: 121 HADPDDLGKGGHELSKSTGNAGGRLACGVVGLQ 153

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BLAST of Bhi03G001844 vs. Swiss-Prot
Match: sp|P11428|SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays OX=4577 GN=SODCC.1 PE=2 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-57
Identity = 105/150 (70.00%), Postives = 123/150 (82.00%), Query Frame = 0


Query: 4   LKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTGP 63
           +KAVA++AG  +++G+I F Q+ +G T V G ISGL PGLHGFH+HALGDTTNGC STGP
Sbjct: 2   VKAVAVLAG-TDVKGTIFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGP 61

Query: 64  HFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVVHAD 123
           HFNP+ K+HG P D +RH GDLGN+ AG DGV  V+ITD  I L GPHSI+GRAVVVHAD
Sbjct: 62  HFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHAD 121

Query: 124 PDDLGKGGHELSKTTGNAGARVGCSIIGIQ 154
           PDDLGKGGHELSK+TGNAG RV C IIG+Q
Sbjct: 122 PDDLGKGGHELSKSTGNAGGRVACGIIGLQ 150

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BLAST of Bhi03G001844 vs. Swiss-Prot
Match: sp|P28757|SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SODCC2 PE=1 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-57
Identity = 103/150 (68.67%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 4   LKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTGP 63
           +KAVA++A    ++G+I F Q+ +G T V G +SGL PGLHGFH+HALGDTTNGC STGP
Sbjct: 2   VKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGP 61

Query: 64  HFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVVHAD 123
           HFNP  K+HG P+D  RH GDLGNI AG DGVA V+++D  I L G HSI+GRAVVVHAD
Sbjct: 62  HFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHAD 121

Query: 124 PDDLGKGGHELSKTTGNAGARVGCSIIGIQ 154
           PDDLGKGGHELSKTTGNAG RV C IIG+Q
Sbjct: 122 PDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

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BLAST of Bhi03G001844 vs. TAIR10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3)

HSP 1 Score: 240.4 bits (612), Expect = 7.7e-64
Identity = 114/154 (74.03%), Postives = 130/154 (84.42%), Query Frame = 0


Query: 2   GALKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNST 61
           G L+AVALIAGD N+RG +QFVQD +G THV G+ISGLSPG HGFHIH+ GDTTNGC ST
Sbjct: 6   GNLRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCIST 65

Query: 62  GPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVVH 121
           GPHFNPL + HG P + ERH GDLGNI AG +GVAE+ I D+ I L G +SILGRAVVVH
Sbjct: 66  GPHFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVH 125

Query: 122 ADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSS 156
           ADPDDLGKGGH+LSK+TGNAG+RVGC IIG+QSS
Sbjct: 126 ADPDDLGKGGHKLSKSTGNAGSRVGCGIIGLQSS 159

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BLAST of Bhi03G001844 vs. TAIR10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1)

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-54
Identity = 99/149 (66.44%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 5   KAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTGPH 64
           K VA++     + G+I F Q+ +G T V+G +SGL PGLHGFH+HALGDTTNGC STGPH
Sbjct: 3   KGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62

Query: 65  FNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVVHADP 124
           FNP  K HG P DA RH GDLGNI  G DG A  +ITD  I L GP+SI+GRAVVVHADP
Sbjct: 63  FNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADP 122

Query: 125 DDLGKGGHELSKTTGNAGARVGCSIIGIQ 154
           DDLGKGGHELS  TGNAG RV C IIG+Q
Sbjct: 123 DDLGKGGHELSLATGNAGGRVACGIIGLQ 151

[Close]

BLAST of Bhi03G001844 vs. TAIR10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2)

HSP 1 Score: 169.9 bits (429), Expect = 1.3e-42
Identity = 80/121 (66.12%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 32  VNGRISGLSPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGGPRDAERHVGDLGNIWAG 91
           VN RI+GL+PG HGFH+H  GDTTNGC STGPHFNP    HG P D  RH GDLGNI A 
Sbjct: 93  VNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINAN 152

Query: 92  PDGVAEVSITDRLISLKGPHSILGRAVVVHADPDDLGKGGHELSKTTGNAGARVGCSIIG 151
            DGVAE +I D  I L GP+S++GRA VVH   DDLGKGGHELS TTGNAG R+ C +IG
Sbjct: 153 ADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIG 212

Query: 152 I 153
           +
Sbjct: 213 L 213

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BLAST of Bhi03G001844 vs. TAIR10
Match: AT1G12520.1 (copper chaperone for SOD1)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 48/141 (34.04%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 6   AVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNSTGPHF 65
           AVA   G  +I G ++F Q S     +    +GLSPG H + I+  GD TNG  STG  +
Sbjct: 164 AVAEFKGP-DIFGVVRFAQVSMELARIEANFTGLSPGTHSWCINEYGDLTNGAASTGSLY 223

Query: 66  NPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVVHADPD 125
           NP +   G        +GDLG + A  +G A  S     + +     ++GRAVVV+   D
Sbjct: 224 NPFQDQTG-----TEPLGDLGTLEADKNGEAFYSGKKEKLKVA---DLIGRAVVVYKTDD 283

Query: 126 DLGKGGHELSKTTGNAGARVG 147
           +  K G  L+       A VG
Sbjct: 284 N--KSGPGLTAAVIARSAGVG 293

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BLAST of Bhi03G001844 vs. TrEMBL
Match: tr|A0A0A0KZZ1|A0A0A0KZZ1_CUCSA (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_4G192040 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-77
Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MGALKAVALIA-GDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGALKAV LIA GD N+RG+IQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVV 120
           STGPHFNPLKKDHG P D+ERHVGDLGNI+AGPDGVAEVSI+DRLISLKGPHS++GRAVV
Sbjct: 61  STGPHFNPLKKDHGSPGDSERHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VHADPDDLGKGGHELSKTTGNAGAR+GC IIGIQSSV
Sbjct: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 157

[Close]

BLAST of Bhi03G001844 vs. TrEMBL
Match: tr|A0A1L5JHV2|A0A1L5JHV2_LUFAE (Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.3e-76
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MGALKAVALI-AGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGALKAV LI  GD NI+GSIQFVQDSNGATHV GRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MGALKAVVLITGGDSNIKGSIQFVQDSNGATHVKGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVV 120
           STGPHFNPLKKDHG P D ERH GDLGNI+AGPDGVAE+SITDRLISLKGPHSILGRAVV
Sbjct: 61  STGPHFNPLKKDHGAPGDVERHAGDLGNIYAGPDGVAEISITDRLISLKGPHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VHADPDDLGKGGHELSKTTGNAGARVGC IIGIQSSV
Sbjct: 121 VHADPDDLGKGGHELSKTTGNAGARVGCGIIGIQSSV 157

[Close]

BLAST of Bhi03G001844 vs. TrEMBL
Match: tr|A0A1S3B5B1|A0A1S3B5B1_CUCME (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103485986 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-76
Identity = 144/157 (91.72%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGALKAVALIA-GDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           M ALKAV LIA GD NIRG+IQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MSALKAVVLIAGGDSNIRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVV 120
           STGPHFNPLKKDHGGP D+ERHVGDLGNI+AGPDGVAEVSI+DRLISLKGPHSI+GRAVV
Sbjct: 61  STGPHFNPLKKDHGGPGDSERHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSIIGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VHAD DDLGKGGHELSKTTGNAGAR+GC IIGIQSSV
Sbjct: 121 VHADLDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 157

[Close]

BLAST of Bhi03G001844 vs. TrEMBL
Match: tr|A0A023PRR8|A0A023PRR8_BETPL (CuZn superoxide dismutase (Fragment) OS=Betula platyphylla OX=78630 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.7e-71
Identity = 130/156 (83.33%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MGALKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNS 60
           MGA KAV LI+G+ NIRGS+QF+++ NGATHV GRI+GLSPGLHGFHIHA GDTTNGCNS
Sbjct: 1   MGAPKAVVLISGNSNIRGSVQFIEEPNGATHVKGRITGLSPGLHGFHIHAFGDTTNGCNS 60

Query: 61  TGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVV 120
           TGPHFNPLKKDHG P D ERH GDLGNI+AGPDGVAE+SITD+ I L GPHSILGRAVVV
Sbjct: 61  TGPHFNPLKKDHGAPTDKERHAGDLGNIFAGPDGVAEISITDKQILLTGPHSILGRAVVV 120

Query: 121 HADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           HADPDDLG GGHELSKTTGNAGARVGC IIG+QSSV
Sbjct: 121 HADPDDLGSGGHELSKTTGNAGARVGCGIIGLQSSV 156

[Close]

BLAST of Bhi03G001844 vs. TrEMBL
Match: tr|A0A218WMH7|A0A218WMH7_PUNGR (Superoxide dismutase [Cu-Zn] OS=Punica granatum OX=22663 GN=CDL15_Pgr001326 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.7e-70
Identity = 130/156 (83.33%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   MGALKAVALIAGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCNS 60
           MG +KAVALI GD N+RGS+QFVQ  NGAT V G+I+GLSPGLHGFHIHALGDTTNGCNS
Sbjct: 30  MGTIKAVALITGDVNVRGSLQFVQQPNGATQVKGKITGLSPGLHGFHIHALGDTTNGCNS 89

Query: 61  TGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVVV 120
           TGPHFNPLKKDHG P D+ERH GDLGNI+AG DGVAEVSITD  I L G HSILGRAVVV
Sbjct: 90  TGPHFNPLKKDHGAPSDSERHAGDLGNIFAGHDGVAEVSITDLQIPLSGQHSILGRAVVV 149

Query: 121 HADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           HADPDDLG+GGHELSKTTGNAGARVGC IIG+QSSV
Sbjct: 150 HADPDDLGRGGHELSKTTGNAGARVGCGIIGLQSSV 185

[Close]

BLAST of Bhi03G001844 vs. NCBI nr
Match: XP_004147539.1 (PREDICTED: superoxide dismutase [Cu-Zn] 2 [Cucumis sativus] >KGN53932.1 hypothetical protein Csa_4G192040 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 2.9e-77
Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MGALKAVALIA-GDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGALKAV LIA GD N+RG+IQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MGALKAVVLIAGGDSNVRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVV 120
           STGPHFNPLKKDHG P D+ERHVGDLGNI+AGPDGVAEVSI+DRLISLKGPHS++GRAVV
Sbjct: 61  STGPHFNPLKKDHGSPGDSERHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSVIGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VHADPDDLGKGGHELSKTTGNAGAR+GC IIGIQSSV
Sbjct: 121 VHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 157

[Close]

BLAST of Bhi03G001844 vs. NCBI nr
Match: APO14278.1 (superoxide dismutase 2 [Luffa aegyptiaca])

HSP 1 Score: 294.7 bits (753), Expect = 1.9e-76
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MGALKAVALI-AGDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           MGALKAV LI  GD NI+GSIQFVQDSNGATHV GRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MGALKAVVLITGGDSNIKGSIQFVQDSNGATHVKGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVV 120
           STGPHFNPLKKDHG P D ERH GDLGNI+AGPDGVAE+SITDRLISLKGPHSILGRAVV
Sbjct: 61  STGPHFNPLKKDHGAPGDVERHAGDLGNIYAGPDGVAEISITDRLISLKGPHSILGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VHADPDDLGKGGHELSKTTGNAGARVGC IIGIQSSV
Sbjct: 121 VHADPDDLGKGGHELSKTTGNAGARVGCGIIGIQSSV 157

[Close]

BLAST of Bhi03G001844 vs. NCBI nr
Match: XP_008441989.1 (PREDICTED: superoxide dismutase [Cu-Zn] 2 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 2.5e-76
Identity = 144/157 (91.72%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MGALKAVALIA-GDCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60
           M ALKAV LIA GD NIRG+IQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN
Sbjct: 1   MSALKAVVLIAGGDSNIRGTIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGCN 60

Query: 61  STGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAVV 120
           STGPHFNPLKKDHGGP D+ERHVGDLGNI+AGPDGVAEVSI+DRLISLKGPHSI+GRAVV
Sbjct: 61  STGPHFNPLKKDHGGPGDSERHVGDLGNIYAGPDGVAEVSISDRLISLKGPHSIIGRAVV 120

Query: 121 VHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VHAD DDLGKGGHELSKTTGNAGAR+GC IIGIQSSV
Sbjct: 121 VHADLDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 157

[Close]

BLAST of Bhi03G001844 vs. NCBI nr
Match: XP_023521911.1 (superoxide dismutase [Cu-Zn] 2-like [Cucurbita pepo subsp. pepo] >XP_023518071.1 superoxide dismutase [Cu-Zn] 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 7.2e-76
Identity = 142/158 (89.87%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MGALKAVALIAG--DCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGC 60
           MGALKAVALI G    N++GSIQFVQDSNGATHVNGR+SGLSPGLHGFHIHALGDTTNGC
Sbjct: 1   MGALKAVALITGGDHSNVKGSIQFVQDSNGATHVNGRLSGLSPGLHGFHIHALGDTTNGC 60

Query: 61  NSTGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAV 120
           NSTGPHFNPLKK+HG P D+ERH GDLGNI+AGPDGVAEVSITDRLISLKGPHSILGRAV
Sbjct: 61  NSTGPHFNPLKKNHGAPGDSERHAGDLGNIYAGPDGVAEVSITDRLISLKGPHSILGRAV 120

Query: 121 VVHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VVHADPDDLGKGGHELSKTTGNAGAR+GC IIGIQSSV
Sbjct: 121 VVHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158

[Close]

BLAST of Bhi03G001844 vs. NCBI nr
Match: XP_022966470.1 (superoxide dismutase [Cu-Zn] 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 291.2 bits (744), Expect = 2.1e-75
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MGALKAVALIAG--DCNIRGSIQFVQDSNGATHVNGRISGLSPGLHGFHIHALGDTTNGC 60
           MGALKAVALI G    N++GSIQFVQDSNGATHVNGR+SGLSPGLHGFHIHALGDTTNGC
Sbjct: 1   MGALKAVALITGGDHSNVKGSIQFVQDSNGATHVNGRLSGLSPGLHGFHIHALGDTTNGC 60

Query: 61  NSTGPHFNPLKKDHGGPRDAERHVGDLGNIWAGPDGVAEVSITDRLISLKGPHSILGRAV 120
           NSTGPHFNPLKK+HG P D+ERH GDLGNI+ GPDGVAEVSITDRLISLKGPHSILGRAV
Sbjct: 61  NSTGPHFNPLKKNHGAPGDSERHAGDLGNIYVGPDGVAEVSITDRLISLKGPHSILGRAV 120

Query: 121 VVHADPDDLGKGGHELSKTTGNAGARVGCSIIGIQSSV 157
           VVHADPDDLGKGGHELSKTTGNAGAR+GC IIGIQSSV
Sbjct: 121 VVHADPDDLGKGGHELSKTTGNAGARIGCGIIGIQSSV 158

The following BLAST results are available for this feature:

BLAST of Bhi03G001844 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49044\|SODC2_MESCR	9.3e-67	76.92	Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum OX=3544 GN=SODCC...	[more]
sp\|Q9FK60\|SODC3_ARATH	1.4e-62	74.03	Superoxide dismutase [Cu-Zn] 3 OS=Arabidopsis thaliana OX=3702 GN=CSD3 PE=1 SV=1	[more]
sp\|P24669\|SODC_PINSY	1.4e-59	67.97	Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris OX=3349 GN=SODCC PE=2 SV=1	[more]
sp\|P11428\|SODC2_MAIZE	1.0e-57	70.00	Superoxide dismutase [Cu-Zn] 2 OS=Zea mays OX=4577 GN=SODCC.1 PE=2 SV=2	[more]
sp\|P28757\|SODC2_ORYSJ	3.0e-57	68.67	Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SODCC...	[more]

BLAST of Bhi03G001844 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18100.1	7.7e-64	74.03	copper/zinc superoxide dismutase 3	[more]
AT1G08830.1	2.5e-54	66.44	copper/zinc superoxide dismutase 1	[more]
AT2G28190.1	1.3e-42	66.12	copper/zinc superoxide dismutase 2	[more]
AT1G12520.1	6.4e-10	34.04	copper chaperone for SOD1	[more]

BLAST of Bhi03G001844 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZZ1\|A0A0A0KZZ1_CUCSA	1.9e-77	91.08	Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_4G192040 PE=3 SV=...	[more]
tr\|A0A1L5JHV2\|A0A1L5JHV2_LUFAE	1.3e-76	91.72	Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
tr\|A0A1S3B5B1\|A0A1S3B5B1_CUCME	1.6e-76	91.72	Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103485986 PE=3 SV=1	[more]
tr\|A0A023PRR8\|A0A023PRR8_BETPL	2.7e-71	83.33	CuZn superoxide dismutase (Fragment) OS=Betula platyphylla OX=78630 PE=2 SV=1	[more]
tr\|A0A218WMH7\|A0A218WMH7_PUNGR	6.7e-70	83.33	Superoxide dismutase [Cu-Zn] OS=Punica granatum OX=22663 GN=CDL15_Pgr001326 PE=3...	[more]

BLAST of Bhi03G001844 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147539.1	2.9e-77	91.08	PREDICTED: superoxide dismutase [Cu-Zn] 2 [Cucumis sativus] >KGN53932.1 hypothet...	[more]
APO14278.1	1.9e-76	91.72	superoxide dismutase 2 [Luffa aegyptiaca]	[more]
XP_008441989.1	2.5e-76	91.72	PREDICTED: superoxide dismutase [Cu-Zn] 2 [Cucumis melo]	[more]
XP_023521911.1	7.2e-76	89.87	superoxide dismutase [Cu-Zn] 2-like [Cucurbita pepo subsp. pepo] >XP_023518071.1...	[more]
XP_022966470.1	2.1e-75	89.24	superoxide dismutase [Cu-Zn] 2-like isoform X1 [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004784	superoxide dismutase activity
GO:0046872	metal ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0006801	superoxide metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR018152	SOD_Cu/Zn_BS
IPR024134	SOD_Cu/Zn_/chaperone
IPR036423	SOD-like_Cu/Zn_dom_sf
IPR001424	SOD_Cu_Zn_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006801	superoxide metabolic process
biological_process	GO:0071493	cellular response to UV-B
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0071457	cellular response to ozone
biological_process	GO:0071486	cellular response to high light intensity
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005615	extracellular space
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M001844	Bhi03M001844	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding domain	PRINTS	PR00068	CUZNDISMTASE	coord: 45..67 score: 76.65 coord: 81..90 score: 74.23 coord: 125..151 score: 69.07 coord: 100..122 score: 60.78
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 15..150 e-value: 1.6E-47 score: 161.1
IPR001424	Superoxide dismutase, copper/zinc binding domain	CDD	cd00305	Cu-Zn_Superoxide_Dismutase	coord: 5..147 e-value: 1.26089E-57 score: 177.838
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	G3DSA:2.60.40.200		coord: 3..154 e-value: 5.2E-61 score: 207.3
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	SSF49329	Cu,Zn superoxide dismutase-like	coord: 5..152
None	No IPR available	PANTHER	PTHR10003:SF31	SUPEROXIDE DISMUTASE CU-ZN 3	coord: 3..156
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 3..156
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00332	SOD_CU_ZN_2	coord: 139..150
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 45..55

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi03G001844	Csa4G192040	Cucumber (Chinese Long) v2	cuwgoB406
Bhi03G001844	MELO3C008809	Melon (DHL92) v3.5.1	mewgoB652
Bhi03G001844	ClCG04G005370	Watermelon (Charleston Gray)	wcgwgoB384
Bhi03G001844	CSPI04G11190	Wild cucumber (PI 183967)	cpiwgoB408
Bhi03G001844	CmaCh07G011610	Cucurbita maxima (Rimu)	cmawgoB1071
Bhi03G001844	CmoCh07G012080	Cucurbita moschata (Rifu)	cmowgoB1064
Bhi03G001844	Lsi01G016730	Bottle gourd (USVL1VR-Ls)	lsiwgoB169
Bhi03G001844	CsGy4G010750	Cucumber (Gy14) v2	cgybwgoB387
Bhi03G001844	MELO3C008809.2	Melon (DHL92) v3.6.1	medwgoB659
Bhi03G001844	Carg12602	Silver-seed gourd	carwgoB0372
Bhi03G001844	CsaV3_4G013220	Cucumber (Chinese Long) v3	cucwgoB410
Bhi03G001844	Cla012125	Watermelon (97103) v1	wgowmB439
Bhi03G001844	Cla97C04G071940	Watermelon (97103) v2	wgowmbB424

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi03G001844	Cucurbita maxima (Rimu)	cmawgoB0799
Bhi03G001844	Cucurbita moschata (Rifu)	cmowgoB0791
Bhi03G001844	Cucurbita pepo (Zucchini)	cpewgoB0085
Bhi03G001844	Cucurbita pepo (Zucchini)	cpewgoB0598
Bhi03G001844	Silver-seed gourd	carwgoB0747