CSPI03G42470 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G42470
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionHistone deacetylase complex subunit SAP30
LocationChr3 : 36503189 .. 36506088 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAGTCACTCTCATTGTTTCTCTCTCTCACATAAAGCACACATTTTCTCTCTCTACTCTATCTCTCTATCTCTCTCTCTCTCTTACTCTGCTTTGTGTTTGTTGTCAACGAAAATTCCCAAATTTCTCTGCGATTTCCCTGTCTTTTGCCCCTGAAATTCCCAAAAACATGCTCTCACCTGCATGATCTTTCTGTATCCTCTAATTTCCCCCCTCTCTTTCTATTGGGTTTTCCTCCAATTCTTCGCCGACGGATTTGGGAATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGTCATACCAAAGTCGTTGTCACCGGGAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTTGTTAAGAAGGCTGTTGGTTTGGGTGGATGGCATTGGCTGGTATGTCTCTTTCTTTAATTCACTTGTTATTTTTTTGTTTCTTTTTTTTGACTGAGTTTAGGCTACATTCAGTCTTGATTGAATCAATTTTGAGTATTGATTAGGTTTTCCCCAATTCCCAATTCCCAATTCTGTTTCTTTTTTGGAATTTTAAATAAAAATTAATCATTTTTGTTGTGGTTTCAAGTTAAGATTTTGCATGCTTAATTTGTTTATTGCATCCATTTCTATTTTTGAATTTCTCTAGAAAAAAAATTTCAGCTTTGTATTGCATGTTCAATTTGACCTATGGATCTGGTGATTATTGATATGGAGGTTTCTTTCACAATGTAAAATTCATTTATTGTAATTGAATTCGGGAAATTTTATTGAATTTGTGAGTTCATAATTTCTCGAATATTTTTAGATTCTTGTTCTGTTTCCTTTGGATATTCCTCCTACCAAGTGTAAAATTTATTTCCGTGTTTATCTAGATGTTGTGTTTCTTGATGTTGGACTTAGAACAGTGTGATTCTTCTTTTGAAACCTGCAGGTCACCATGATTATAAATATAATATAGGTTCAGCATTTAATTTTGAAATTAAAAAAATCCTCAGGTTCTCACGAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGATGATCTGGAATTCGAGAACTTACACTGGAATGGATCCGATATGGGTAAGTTTGGAATCACTTTTATTCTTGTTCACTGGATTGAATAAACAACATTGGATTGTTGATTCTTCAAATGGATTAGATTGGTGAATTTCGTAAGCTGGCATCAATTAAACATAGTAAAAAAGCATAAAGAAAGCTAGTTGTCCTCACTTTCCTTTCGATTCTGATTAGGGCATTCATAATTAAAACGCTTGCTTGTTTCGGGTAATTGTTTCATTGGTCCTCTGTAGTTGTTGTGGAATGATATACTTTTTAGGAATAGTGGTTGAGTTTGGTACTTTGGATTCTTTGCTCATTCACCTTTTGCTTTATTTGAAATCTTGTTGTGTCATTTATTCTTTTTCTCCTGGCCCCTCCCATGTTTTCTTTTCATAATGCTTTTGGTATTTTGATTTCCCAGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGACACACAAATCGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCCAAGGGATCTATTTCCACCCCCCGTGGGTCCATGGTACGTAAGAAACCGACAATCGTTTTTTGTTGCATTTCTAGAAATAAAACGATATTGTGCTCATAATTAATCTAAGTTGGGCCTTAATTAATGATGTTCCCTGTGCAGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTAAGTTACTGTTTATTTGATAGGCATGTTATAGTTTGCTTAAGCTGCAATGACTGAGAGAATTCAATATCTTGTAGGTGGATGCCTTTCCTAACCCATCAAAAGAACAGTTAGTGGATGTTGTTCAAAGGCATTTCATGTCCCAGGTACTCAGATTTCATTGTTTATGTTTCAATCAGTCGATGCTTGTGCCTATATCGGTGCTGTAATAGTACTACATCCCATAACATGTTTGTTTACAATGCTTGTGCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTACTGTCTGCAAATGACGAGTAAAGGCTGTAACACCAAGTTCAATATTCATCCATTTCTAACAAGAAAAAGAAAAAAAAACACCGGTAGCACCCGAAATTCCCACTTCTTCCCCACTACATTAATGTTCCGTGTAATATAAGTATGGTGGCTTGTTATTGAGGTATTATATTACCCTTTTGTTAGTGTAATTATGGTAGGTAAATATAGTATATAATTTATATAATGTACGTACGACTGGCTAATAGACCTACGAAAACTGAGAGAAGTCCTTACTGACTTCATTTTCCTAAACGTGGATGGAATGCTGACTGGGGAGAGTGGGTATCTTGAAATGAATGTGTATATTCTTTGAATGGCTTTTATGTTTAGTTTGCCATACGCTCAGCTCAGTTGTATATGGATGGACACCACATTAATTTTGTTTAAATCTCAAATGTGGAGTTTGTGGATTCTATTACGCAACCTTGGTCCTGTTGTTTTATGAACTTAAATAACAGATTATTTCATATATTATATAAATTATCTAATGAGTATTTGAATGAAGAGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGGGGAAAGGTGACAGCTAAGAAGGTGTAATTGAATGCTTGAATTAAAGTGAATTTTTATTAAAGAAAAATGGAAAAGAAAAGAAGAAAAGATCTTTAAGAATCAAAGCGGGGCC

mRNA sequence

ATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGTCATACCAAAGTCGTTGTCACCGGGAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTTGTTAAGAAGGCTGTTGGTTTGGGTGGATGGCATTGGCTGGTTCTCACGAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGATGATCTGGAATTCGAGAACTTACACTGGAATGGATCCGATATGGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGACACACAAATCGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCCAAGGGATCTATTTCCACCCCCCGTGGGTCCATGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTGGATGCCTTTCCTAACCCATCAAAAGAACAGTTAGTGGATGTTGTTCAAAGGCATTTCATGTCCCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTACTGTCTGCAAATGA

Coding sequence (CDS)

ATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGTCATACCAAAGTCGTTGTCACCGGGAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTTGTTAAGAAGGCTGTTGGTTTGGGTGGATGGCATTGGCTGGTTCTCACGAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGATGATCTGGAATTCGAGAACTTACACTGGAATGGATCCGATATGGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGACACACAAATCGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCCAAGGGATCTATTTCCACCCCCCGTGGGTCCATGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTGGATGCCTTTCCTAACCCATCAAAAGAACAGTTAGTGGATGTTGTTCAAAGGCATTTCATGTCCCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTACTGTCTGCAAATGA
Homology
[Close]
BLAST of CSPI03G42470 vs. TrEMBL
Match: A0A0A0LDS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G855270 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 3.8e-121
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 224

[Close]
BLAST of CSPI03G42470 vs. TrEMBL
Match: A0A067L1V1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04390 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 2.9e-105
Identity = 197/224 (87.95%), Postives = 208/224 (92.86%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FSHL S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDLEF+N+ WNGSD+ASDDT KSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDLASDDTQKSHRS 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R RTHKS+GSS KT+SRS S +SQSKGS+ST RG+ KVDL KLEM+ALWRYWRHFNLVDA
Sbjct: 121 RHRTHKSTGSSHKTMSRSLSCDSQSKGSVSTSRGAAKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
            PNPSKEQLVDVVQRHFMSQQ+DELQVIVGFV AAKRLK TVCK
Sbjct: 181 IPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKPTVCK 224

[Close]
BLAST of CSPI03G42470 vs. TrEMBL
Match: M5XGR5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011104mg PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.2e-104
Identity = 196/224 (87.50%), Postives = 209/224 (93.30%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEA+ESSV+G FSHL S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVHGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDL+FEN+ WNGSDMASDDT KSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLDFENVQWNGSDMASDDTQKSHRS 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HKSSGSS KT+ R+FS +SQSKGSISTPRGS K+DLGKLEM+ALWRYWRHFNLVDA
Sbjct: 121 RQRVHKSSGSSHKTMCRTFSCDSQSKGSISTPRGSTKIDLGKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
            PNPSKE+L+DVVQRHFMSQ +DELQVIVGFV AAKRLK TVCK
Sbjct: 181 IPNPSKEELIDVVQRHFMSQPIDELQVIVGFVQAAKRLK-TVCK 223

[Close]
BLAST of CSPI03G42470 vs. TrEMBL
Match: A0A0B0N115_GOSAR (Histone deacetylase complex subunit SAP30 OS=Gossypium arboreum GN=F383_33863 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.7e-103
Identity = 198/225 (88.00%), Postives = 208/225 (92.44%), Query Frame = 1 

Query: 1   MLEAVESSVNGA-FSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV 60
           MLEA+ESSVNG  FS   S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV
Sbjct: 1   MLEAMESSVNGGGFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV 60

Query: 61  GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHR 120
           GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDLEFEN+ WNGSDMASDDT KSHR
Sbjct: 61  GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHR 120

Query: 121 PRQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVD 180
            R RTHKS+GSS KT+SRSFS +SQSKGS+STPRGS KVDL KLEM+ALWRYWRHFNLVD
Sbjct: 121 SRHRTHKSTGSSHKTMSRSFSCDSQSKGSVSTPRGSTKVDLSKLEMAALWRYWRHFNLVD 180

Query: 181 AFPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
           A PNPSKEQLVDVVQRHF+SQQ+DELQVIVGFV AAKRLK TVCK
Sbjct: 181 AIPNPSKEQLVDVVQRHFVSQQMDELQVIVGFVQAAKRLK-TVCK 224

[Close]
BLAST of CSPI03G42470 vs. TrEMBL
Match: A0A151TBZ8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_019167 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.7e-103
Identity = 196/224 (87.50%), Postives = 206/224 (91.96%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEA+ESSVNG FSHL S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDLEFEN+ WNGSDMASDDT KSH+ 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENIQWNGSDMASDDTQKSHKS 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R R H++ GSS KTISRSFS +SQSKGS+S P GS KVDL KLEM+ALWRYWRHFNLVDA
Sbjct: 121 RHRMHRTLGSSHKTISRSFSGDSQSKGSVSMPHGSAKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
            PNPSKEQLVDVVQRHFMSQQ+DELQVIVGFV AAKRLK TVCK
Sbjct: 181 VPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLK-TVCK 223

[Close]
BLAST of CSPI03G42470 vs. TAIR10
Match: AT1G19330.3 (AT1G19330.3 unknown protein)

HSP 1 Score: 310.8 bits (795), Expect = 6.7e-85
Identity = 176/234 (75.21%), Postives = 192/234 (82.05%), Query Frame = 1 

Query: 1   MLEAVESS--VNGAFSHLHSS-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60
           MLEAV+SS  VNG F  + S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK
Sbjct: 1   MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60

Query: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDM-----AS 120
           KAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNE+DDDL+FEN   NGSDM     AS
Sbjct: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPAS 120

Query: 121 DDTLKSHRPRQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSM-KVDLGKLEMSALWR 180
           +DTLK H+ + R  +SS SS KT+SRS S +SQSK S  TP  +M KVDL KLEM AL  
Sbjct: 121 EDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLN 180

Query: 181 YWRHFNLVDAFPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
           YWRHFNLVDA PNPSKEQL+D+VQRHFMSQQ+DELQVIVGFV AAKR+K   CK
Sbjct: 181 YWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMK-KACK 233

[Close]
BLAST of CSPI03G42470 vs. TAIR10
Match: AT1G75060.1 (AT1G75060.1 unknown protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-77
Identity = 155/213 (72.77%), Postives = 177/213 (83.10%), Query Frame = 1 

Query: 11  GAFSHLHSS-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 70
           G FS L S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV
Sbjct: 17  GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 76

Query: 71  LTNGIEVKLQRNALSVIEAPTGNEDDDDLEFE-NLHWN-GSDMASDDTLKSHRPRQRTHK 130
           LTNGIEVKLQRNALSV+E PTGNE+D+DLE + +  WN  SDM ++DTLK H+ ++R H+
Sbjct: 77  LTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHR 136

Query: 131 SSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDAFPNPSK 190
           SS  S K + R  S +S SK S  TPR +MKVDL KL+M+AL RYWRHFNLVDA PNP+K
Sbjct: 137 SSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 196

Query: 191 EQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLK 220
           EQL+D++QRHFMSQQ+DELQVIVGFV AA  +K
Sbjct: 197 EQLIDIIQRHFMSQQMDELQVIVGFVQAATGMK 229

[Close]
BLAST of CSPI03G42470 vs. NCBI nr
Match: gi|449460121|ref|XP_004147794.1| (PREDICTED: uncharacterized protein LOC101206163 [Cucumis sativus])

HSP 1 Score: 442.2 bits (1136), Expect = 5.4e-121
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 224

[Close]
BLAST of CSPI03G42470 vs. NCBI nr
Match: gi|659133200|ref|XP_008466608.1| (PREDICTED: uncharacterized protein LOC103503976 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-117
Identity = 221/224 (98.66%), Postives = 221/224 (98.66%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLK TVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLK-TVCK 223

[Close]
BLAST of CSPI03G42470 vs. NCBI nr
Match: gi|802592804|ref|XP_012071778.1| (PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas])

HSP 1 Score: 389.4 bits (999), Expect = 4.2e-105
Identity = 197/224 (87.95%), Postives = 208/224 (92.86%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FSHL S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDLEF+N+ WNGSD+ASDDT KSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDLASDDTQKSHRS 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R RTHKS+GSS KT+SRS S +SQSKGS+ST RG+ KVDL KLEM+ALWRYWRHFNLVDA
Sbjct: 121 RHRTHKSTGSSHKTMSRSLSCDSQSKGSVSTSRGAAKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
            PNPSKEQLVDVVQRHFMSQQ+DELQVIVGFV AAKRLK TVCK
Sbjct: 181 IPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKPTVCK 224

[Close]
BLAST of CSPI03G42470 vs. NCBI nr
Match: gi|596217310|ref|XP_007223940.1| (hypothetical protein PRUPE_ppa011104mg [Prunus persica])

HSP 1 Score: 386.0 bits (990), Expect = 4.6e-104
Identity = 196/224 (87.50%), Postives = 209/224 (93.30%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEA+ESSV+G FSHL S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVHGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDL+FEN+ WNGSDMASDDT KSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLDFENVQWNGSDMASDDTQKSHRS 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HKSSGSS KT+ R+FS +SQSKGSISTPRGS K+DLGKLEM+ALWRYWRHFNLVDA
Sbjct: 121 RQRVHKSSGSSHKTMCRTFSCDSQSKGSISTPRGSTKIDLGKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
            PNPSKE+L+DVVQRHFMSQ +DELQVIVGFV AAKRLK TVCK
Sbjct: 181 IPNPSKEELIDVVQRHFMSQPIDELQVIVGFVQAAKRLK-TVCK 223

[Close]
BLAST of CSPI03G42470 vs. NCBI nr
Match: gi|1009134717|ref|XP_015884599.1| (PREDICTED: uncharacterized protein LOC107420216 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 384.8 bits (987), Expect = 1.0e-103
Identity = 198/224 (88.39%), Postives = 207/224 (92.41%), Query Frame = 1 

Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG F+ L S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFAQLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE++DDL+FEN+ WNGSDMASDDT KSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEEDDLDFENMQWNGSDMASDDTQKSHRS 120

Query: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R R HKSSGSS KT+ RS S +SQSKGSISTPRGS KVDL KLEM+ALWRYWRHFNLVDA
Sbjct: 121 RHRVHKSSGSSHKTMCRSLSCDSQSKGSISTPRGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 225
           FPNPSKEQLVDVVQRHFMSQQ+DELQVIVGFV AAKRLK TVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQIDELQVIVGFVQAAKRLK-TVCK 223

The following BLAST results are available for this feature:
BLAST of CSPI03G42470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G42470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDS8_CUCSA3.8e-121100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G855270 PE=4 SV=1[more]
A0A067L1V1_JATCU2.9e-10587.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04390 PE=4 SV=1[more]
M5XGR5_PRUPE3.2e-10487.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011104mg PE=4 SV=1[more]
A0A0B0N115_GOSAR4.7e-10388.00Histone deacetylase complex subunit SAP30 OS=Gossypium arboreum GN=F383_33863 PE... [more]
A0A151TBZ8_CAJCA4.7e-10387.50Uncharacterized protein OS=Cajanus cajan GN=KK1_019167 PE=4 SV=1[more]
BLAST of CSPI03G42470 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19330.36.7e-8575.21 unknown protein[more]
AT1G75060.11.0e-7772.77 unknown protein[more]
BLAST of CSPI03G42470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460121|ref|XP_004147794.1|5.4e-121100.00PREDICTED: uncharacterized protein LOC101206163 [Cucumis sativus][more]
gi|659133200|ref|XP_008466608.1|1.3e-11798.66PREDICTED: uncharacterized protein LOC103503976 [Cucumis melo][more]
gi|802592804|ref|XP_012071778.1|4.2e-10587.95PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas][more]
gi|596217310|ref|XP_007223940.1|4.6e-10487.50hypothetical protein PRUPE_ppa011104mg [Prunus persica][more]
gi|1009134717|ref|XP_015884599.1|1.0e-10388.39PREDICTED: uncharacterized protein LOC107420216 isoform X2 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024145His_deAcase_SAP30/SAP30L
IPR025718SAP30_Sin3-bd
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G42470.1CSPI03G42470.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024145Histone deacetylase complex subunit SAP30/SAP30-likePANTHERPTHR13286SAP30coord: 11..222
score: 1.2E
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domainPFAMPF13867SAP30_Sin3_bdgcoord: 163..216
score: 3.7
NoneNo IPR availablePANTHERPTHR13286:SF6HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30Lcoord: 11..222
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G42470Cla020742Watermelon (97103) v1cpiwmB243
CSPI03G42470Cla022515Watermelon (97103) v1cpiwmB209
CSPI03G42470Csa3G855270Cucumber (Chinese Long) v2cpicuB120
CSPI03G42470Csa2G361400Cucumber (Chinese Long) v2cpicuB110
CSPI03G42470MELO3C010922Melon (DHL92) v3.5.1cpimeB195
CSPI03G42470MELO3C003880Melon (DHL92) v3.5.1cpimeB215
CSPI03G42470ClCG08G015330Watermelon (Charleston Gray)cpiwcgB272
CSPI03G42470ClCG05G019190Watermelon (Charleston Gray)cpiwcgB238
CSPI03G42470Lsi08G014170Bottle gourd (USVL1VR-Ls)cpilsiB239
CSPI03G42470Lsi04G016400Bottle gourd (USVL1VR-Ls)cpilsiB190
CSPI03G42470MELO3C010922.2Melon (DHL92) v3.6.1cpimedB189
CSPI03G42470MELO3C003880.2Melon (DHL92) v3.6.1cpimedB209
CSPI03G42470CsaV3_2G028460Cucumber (Chinese Long) v3cpicucB135
CSPI03G42470CsaV3_3G044890Cucumber (Chinese Long) v3cpicucB145
CSPI03G42470Cla97C05G100710Watermelon (97103) v2cpiwmbB222
CSPI03G42470Cla97C08G158910Watermelon (97103) v2cpiwmbB256
CSPI03G42470Bhi11G002156Wax gourdcpiwgoB225
CSPI03G42470Bhi04G000247Wax gourdcpiwgoB319
CSPI03G42470Cucsa.232370Cucumber (Gy14) v1cgycpiB342
CSPI03G42470Cucsa.342130Cucumber (Gy14) v1cgycpiB504
CSPI03G42470CmaCh01G018890Cucurbita maxima (Rimu)cmacpiB447
CSPI03G42470CmaCh05G002240Cucurbita maxima (Rimu)cmacpiB804
CSPI03G42470CmaCh09G001730Cucurbita maxima (Rimu)cmacpiB017
CSPI03G42470CmaCh12G004920Cucurbita maxima (Rimu)cmacpiB185
CSPI03G42470CmoCh05G002310Cucurbita moschata (Rifu)cmocpiB791
CSPI03G42470CmoCh01G019520Cucurbita moschata (Rifu)cmocpiB435
CSPI03G42470CmoCh09G001700Cucurbita moschata (Rifu)cmocpiB008
CSPI03G42470CmoCh12G004390Cucurbita moschata (Rifu)cmocpiB170
CSPI03G42470Cp4.1LG06g01220Cucurbita pepo (Zucchini)cpecpiB781
CSPI03G42470Cp4.1LG07g04290Cucurbita pepo (Zucchini)cpecpiB829
CSPI03G42470Cp4.1LG02g07350Cucurbita pepo (Zucchini)cpecpiB558
CSPI03G42470Cp4.1LG11g01950Cucurbita pepo (Zucchini)cpecpiB106
CSPI03G42470CsGy3G039990Cucumber (Gy14) v2cgybcpiB111
CSPI03G42470CsGy2G019580Cucumber (Gy14) v2cgybcpiB067
CSPI03G42470Carg04071Silver-seed gourdcarcpiB1015
CSPI03G42470Carg17128Silver-seed gourdcarcpiB0984
CSPI03G42470Carg11817Silver-seed gourdcarcpiB0210
CSPI03G42470Carg08739Silver-seed gourdcarcpiB0116
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI03G42470CSPI02G19770Wild cucumber (PI 183967)cpicpiB058
The following block(s) are covering this gene:

None