MELO3C003880.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003880.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Histone deacetylase complex subunit
Location	chr04 : 6083685 .. 6086552 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTTATAATTAATATTTATAGTTAAAAGAAAAGAGAGGATGAATAGGAATAATAAGAAAGATGATTTTTGGTAAAGAATTGTATAATTTAAATTTTTACGTGGCGGATTGTAATTGGTTGGTTAAAGGACGTCGGGATTCGTAGCAATACACACCAATTAACAATTCAAACTCACTCTCATTATTTCTCTCTCTCACATAAAGCACACATTTTCTCTCTCTACTCTATCTCTCTCTCTCTCTCTCTACTCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTACTCTGCTTTGTGTTTGTTGTCAACGAAAATTCCCAAATTTCTCTGCGATTTCCCTGTCTTTTGCCGCTGAAATTCCCAAAAACATGCTCTCACCTGCATGATCTTTCTGTATCCTCTAATTTCCCCCCTCTCTTTCTATTGCCTTTTGCTCCAATTCATCGCCGACGGATTTGGGAATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGTCATACCAAAGTCGTTGTCACCGGAAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTCGTTAAGAAGGCAGTTGGTTTGGGTGGATGGCATTGGCTGGTACGTCGCTTTCTTTAATTCACTTCTTATTGTTTTTATTTTTTATTTTGTTTTTTGAGTGAGTCTAGGCTACATTCAGTCTTGGTTGAATCAATTTTGAGTATTGATTAGGTTTTCCCCAATTCCCAATTCCCAATTCTGTTTTTTGGGATTTTTTAAAATAAATATTTAATCATTTTTGTTGTGGTTTCAAGTTATGATTGCATGCTTAATTTGTTTATTGCATCCATTTCGATTTCTGAATTTCTGTAGAAAAAATTTCAGCTATGAATTAATTGCATGTTCAATTTGACCTATGGATCTGGTGATTAGAGATATGGAGGTTTCTTTCACAATGTAAAATTCATTTATTGTAATTGAATTCGGGAAATTTTATTGAATTTGTGAGTTCATAATTTCTCGAATATTTTTAGATTCTTGTTCTGTTTCCTTTGGATATTCCTCCTACCAAGTGTAAAATTTATTTCCATGTTTATCTAGACGTCGTGTTCCTTGATGTTAGACTTAGAACAGTGTGATTCTTCTTTTGAAACCTGCAGGTCACCATGATTATAAATATAATCTAGGTTCAGCATTTAATTTTGAAATTAAAAAAATCCTCAGGTTCTCACGAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGATGATCTCGAATTTGAGAACTTACACTGGAATGGATCCGATATGGGTAAGTTTGGAATCACTTCTATTCTTGTTCACTGGATTGAATAAACAACATTGGATTGTTGATTCTTCAAATGGATTAGATTGGTGAATTTCGTAAGCTGGCATCAATTAAACATAGTAAAAAAGTATAAAGAAAGCTAGTTGTCCTCACTTTTCTTTCGATTCTGATTAGGGCATTCATAATTAAAACGCTTGCTTGTTTCGGGTAATTGTTTCATTGGTCCTCTGTAGTTGTTGTGGAATGATATACTTTTTAGGAATAGTGGTTGAGTTTGGTACTTTGGATTCTTTGCTCATTCACCTTTTGCTTTATTTGAAATCTTGTTGTGTCATTTATTCTTTTTCTCCTGGCCCCTCCCATGTTTTCTTTTCATAATGCTTTTGGTATTTTGATTTCCCAGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGGCACACAAATTGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCGAAGGGATCTATTTCCACCCCCCGTGGGTCCATGGTATGTAAGAAACGGACAATCGTTTCTTGTTGCATTTCAATGATATTGAGCTCATAATCTAAGTTGAGCCTTAACTAGTGATGTTCCCTGTGCAGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTAAGTTACCGTGTATTTGATAGGCATGTTATAGTTTGCATGTTTGTACCACCATGACTGAGAGAGAGAATTCTATATCTTATAGGTGGATGCTTTTCCTAACCCATCAAAAGAGCAGTTGGTGGATGTTGTTCAAAGGCATTTCATGTCCCAGGTACTTAAGATTTCTTGATCTAATCCTTTATTTTTCAATCAATCGATGCTTGTGCCTATATCGGTGCTGTAATACTACATCCTGTACATGTTTGTTTACAATGCTTGTGCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTGTCTGCAAATGACGAGTAAAGGATGTAACACCAAGTTCAATATTCATCCATTTCTAACAAAAAGAGAAAAAAAAAAAGAAAAAAACACCGGTACCACCCGAAATTCCCACTTCTTCCCCACTACATATATTAATGTTCCCTGTAATATAGGTATCGTGGCTTGTTATTGAGGTATTATTACCCTTTTGTTAGTGTAATTATGGTAGGTAAATATAGTATATAATTTATATAATGTACGCACGACTGGCTAATAGACCTACGAAAACTGAGAGAAGTCCTTACTGACTTCATTTTCCTAAACCTCGATCGAATGCTGACTTGGGAGAGTGGGTATCTTGAAATGAATGTGTATATTCTTTGAATGCTTTTTTTATGTTATTAGTTTGTCGGATACAACATTAAATTTGTTTAAATCTCAAATGTGGAGTATGTTGATTC

mRNA sequence

ATATTTATAATTAATATTTATAGTTAAAAGAAAAGAGAGGATGAATAGGAATAATAAGAAAGATGATTTTTGGTAAAGAATTGTATAATTTAAATTTTTACGTGGCGGATTGTAATTGGTTGGTTAAAGGACGTCGGGATTCGTAGCAATACACACCAATTAACAATTCAAACTCACTCTCATTATTTCTCTCTCTCACATAAAGCACACATTTTCTCTCTCTACTCTATCTCTCTCTCTCTCTCTCTCTTACTCTGCTTTGTGTTTGTTGTCAACGAAAATTCCCAAATTTCTCTGCGATTTCCCTGTCTTTTGCCGCTGAAATTCCCAAAAACATGCTCTCACCTGCATGATCTTTCTGTATCCTCTAATTTCCCCCCTCTCTTTCTATTGCCTTTTGCTCCAATTCATCGCCGACGGATTTGGGAATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGTCATACCAAAGTCGTTGTCACCGGAAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTCGTTAAGAAGGCAGTTGGTTTGGGTGGATGGCATTGGCTGGTTCTCACGAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGATGATCTCGAATTTGAGAACTTACACTGGAATGGATCCGATATGGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGGCACACAAATTGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCGAAGGGATCTATTTCCACCCCCCGTGGGTCCATGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTGGATGCTTTTCCTAACCCATCAAAAGAGCAGTTGGTGGATGTTGTTCAAAGGCATTTCATGTCCCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTGTCTGCAAATGACGAGTAAAGGATGTAACACCAAGTTCAATATTCATCCATTTCTAACAAAAAGAGAAAAAAAAAAAGAAAAAAACACCGGTACCACCCGAAATTCCCACTTCTTCCCCACTACATATATTAATGTTCCCTGTAATATAGGTATCGTGGCTTGTTATTGAGGTATTATTACCCTTTTGTTAGTGTAATTATGGTAGGTAAATATAGTATATAATTTATATAATGTACGCACGACTGGCTAATAGACCTACGAAAACTGAGAGAAGTCCTTACTGACTTCATTTTCCTAAACCTCGATCGAATGCTGACTTGGGAGAGTGGGTATCTTGAAATGAATGTGTATATTCTTTGAATGCTTTTTTTATGTTATTAGTTTGTCGGATACAACATTAAATTTGTTTAAATCTCAAATGTGGAGTATGTTGATTC

Coding sequence (CDS)

ATGCTTGAAGCTGTGGAGAGCTCCGTCAATGGCGCCTTCTCCCACCTCCACAGTAGTGGTGACAGTAGTGAGGAGGAGCTTTCTGTTCTCCCTCGTCATACCAAAGTCGTTGTCACCGGAAACAATCGTACCAAATCGGTGCTCGTTGGACTTCAAGGCGTCGTTAAGAAGGCAGTTGGTTTGGGTGGATGGCATTGGCTGGTTCTCACGAATGGCATTGAAGTTAAGCTACAGAGAAACGCCCTCAGTGTAATTGAAGCACCAACCGGCAATGAGGATGATGATGATCTCGAATTTGAGAACTTACACTGGAATGGATCCGATATGGCATCTGATGACACTCTAAAGTCCCATAGACCGAGACAAAGGGCACACAAATTGTCGGGATCATCCCTCAAAACAATCAGCCGATCGTTCTCATATGAATCACAGTCGAAGGGATCTATTTCCACCCCCCGTGGGTCCATGAAAGTCGACCTCGGTAAACTTGAGATGTCTGCCTTGTGGAGATATTGGCGACACTTCAATCTTGTGGATGCTTTTCCTAACCCATCAAAAGAGCAGTTGGTGGATGTTGTTCAAAGGCATTTCATGTCCCAGCAACTAGACGAGTTACAGGTGATTGTTGGGTTTGTCCACGCTGCAAAGAGACTCAAGACTGTCTGCAAATGA

Protein sequence

MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRPRQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDAFPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK

Homology

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BLAST of MELO3C003880.2 vs. NCBI nr
Match: XP_008466608.1 (PREDICTED: uncharacterized protein LOC103503976 [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 3.1e-120
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

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BLAST of MELO3C003880.2 vs. NCBI nr
Match: XP_004147794.1 (PREDICTED: uncharacterized protein LOC101206163 [Cucumis sativus] >KGN59933.1 hypothetical protein Csa_3G855270 [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 221/224 (98.66%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLK-TVCK 224
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLK TVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 224

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BLAST of MELO3C003880.2 vs. NCBI nr
Match: XP_022144972.1 (uncharacterized protein LOC111013658 isoform X2 [Momordica charantia])

HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-111
Identity = 212/223 (95.07%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FS L SSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSQLQSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTG+EDDDDLEFENL WNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGHEDDDDLEFENLQWNGSDMASDDTLKSHRP 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R R HK SGSS KTISRSFSYESQSKGSISTPRGSM VDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RHRTHKSSGSSHKTISRSFSYESQSKGSISTPRGSM-VDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVD+VQRHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDLVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 222

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BLAST of MELO3C003880.2 vs. NCBI nr
Match: XP_022939982.1 (uncharacterized protein LOC111445752 isoform X2 [Cucurbita moschata] >XP_023523277.1 uncharacterized protein LOC111787523 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.6 bits (1054), Expect = 3.4e-111
Identity = 213/223 (95.52%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FS L SSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSQLQSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENL WNGSDMASDDTLKSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLQWNGSDMASDDTLKSHRL 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R R HK SGSS KTISRSFSYESQSKGSISTPRGSM VDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RYRTHKSSGSSHKTISRSFSYESQSKGSISTPRGSM-VDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 222

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BLAST of MELO3C003880.2 vs. NCBI nr
Match: XP_022982127.1 (uncharacterized protein LOC111481057 isoform X1 [Cucurbita maxima])

HSP 1 Score: 409.8 bits (1052), Expect = 5.8e-111
Identity = 212/223 (95.07%), Postives = 213/223 (95.52%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FS L SSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSQLQSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFEN+ WNGSDMASDDTLKSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENMQWNGSDMASDDTLKSHRL 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R R HK SGSS KTISRSFSYESQSKGSISTPRGSM VDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RYRTHKSSGSSHKTISRSFSYESQSKGSISTPRGSM-VDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 222

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BLAST of MELO3C003880.2 vs. TAIR10
Match: AT1G19330.3 (unknown protein)

HSP 1 Score: 315.1 bits (806), Expect = 3.5e-86
Identity = 175/233 (75.11%), Postives = 191/233 (81.97%), Query Frame = 0


Query: 1   MLEAVESS--VNGAFSHLHS-SGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60
           MLEAV+SS  VNG F  + S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK
Sbjct: 1   MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60

Query: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDM-----AS 120
           KAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNE+DDDL+FEN   NGSDM     AS
Sbjct: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPAS 120

Query: 121 DDTLKSHRPRQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSM-KVDLGKLEMSALWR 180
           +DTLK H+ + R  + S SS KT+SRS S +SQSK S  TP  +M KVDL KLEM AL  
Sbjct: 121 EDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLN 180

Query: 181 YWRHFNLVDAFPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           YWRHFNLVDA PNPSKEQL+D+VQRHFMSQQ+DELQVIVGFV AAKR+K  CK
Sbjct: 181 YWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMKKACK 233

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BLAST of MELO3C003880.2 vs. TAIR10
Match: AT1G75060.1 (unknown protein)

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-78
Identity = 155/217 (71.43%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 11  GAFSHLHSS-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 70
           G FS L S  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV
Sbjct: 17  GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 76

Query: 71  LTNGIEVKLQRNALSVIEAPTGNEDDDDLEFE-NLHWN-GSDMASDDTLKSHRPRQRAHK 130
           LTNGIEVKLQRNALSV+E PTGNE+D+DLE + +  WN  SDM ++DTLK H+ ++R H+
Sbjct: 77  LTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHR 136

Query: 131 LSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDAFPNPSK 190
            S  S K + R  S +S SK S  TPR +MKVDL KL+M+AL RYWRHFNLVDA PNP+K
Sbjct: 137 SSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 196

Query: 191 EQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           EQL+D++QRHFMSQQ+DELQVIVGFV AA  +K  C+
Sbjct: 197 EQLIDIIQRHFMSQQMDELQVIVGFVQAATGMKKACQ 233

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BLAST of MELO3C003880.2 vs. TrEMBL
Match: tr|A0A1S3CRQ8|A0A1S3CRQ8_CUCME (uncharacterized protein LOC103503976 OS=Cucumis melo OX=3656 GN=LOC103503976 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 2.0e-120
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 223

[Close]

BLAST of MELO3C003880.2 vs. TrEMBL
Match: tr|A0A0A0LDS8|A0A0A0LDS8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855270 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 7.2e-118
Identity = 221/224 (98.66%), Postives = 221/224 (98.66%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA
Sbjct: 121 RQRTHKSSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLK-TVCK 224
           FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLK TVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTTVCK 224

[Close]

BLAST of MELO3C003880.2 vs. TrEMBL
Match: tr|A0A2R6R3J2|A0A2R6R3J2_ACTCH (Histone deacetylase complex subunit like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc11816 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.8e-106
Identity = 199/223 (89.24%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEAVESSVNG FS L S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSQLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+D+DLEFEN+HWNGSD+ASDDT KSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDNDLEFENVHWNGSDLASDDTQKSHRS 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R R HK SGSS KT+SRS S++SQSKGSISTPRGS K+DL KLEM+ALWRYWRHFNLVDA
Sbjct: 121 RHRIHKSSGSSHKTMSRSLSWDSQSKGSISTPRGSTKIDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
            PNPSKEQLVDVVQRHFMSQQLDELQVIVGFV AAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVQAAKRLKTVCK 223

[Close]

BLAST of MELO3C003880.2 vs. TrEMBL
Match: tr|M5XGR5|M5XGR5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G383300 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 5.3e-105
Identity = 195/223 (87.44%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEA+ESSV+G FSHL S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVHGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDL+FEN+ WNGSDMASDDT KSHR 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLDFENVQWNGSDMASDDTQKSHRS 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           RQR HK SGSS KT+ R+FS +SQSKGSISTPRGS K+DLGKLEM+ALWRYWRHFNLVDA
Sbjct: 121 RQRVHKSSGSSHKTMCRTFSCDSQSKGSISTPRGSTKIDLGKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
            PNPSKE+L+DVVQRHFMSQ +DELQVIVGFV AAKRLKTVCK
Sbjct: 181 IPNPSKEELIDVVQRHFMSQPIDELQVIVGFVQAAKRLKTVCK 223

[Close]

BLAST of MELO3C003880.2 vs. TrEMBL
Match: tr|A0A151RBL7|A0A151RBL7_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_038783 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 6.5e-103
Identity = 193/223 (86.55%), Postives = 204/223 (91.48%), Query Frame = 0


Query: 1   MLEAVESSVNGAFSHLHSSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MLEA+ESSVNG FSHL S GDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEDDDDLEFENLHWNGSDMASDDTLKSHRP 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNE+DDDLEFEN+ WNGSDMASDDT KSH+ 
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKS 120

Query: 121 RQRAHKLSGSSLKTISRSFSYESQSKGSISTPRGSMKVDLGKLEMSALWRYWRHFNLVDA 180
           R R H+  GSS KT+SRSFS +SQSKGS+S P GS  VDL KLEM+ALWRYWRHFNLVDA
Sbjct: 121 RHRMHRALGSSHKTMSRSFSGDSQSKGSVSMPHGSTMVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVHAAKRLKTVCK 224
            PNPSKEQLVDVVQRHFMSQQ+DELQVI+GFV AAKRLKTVCK
Sbjct: 181 VPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRLKTVCK 223

The following BLAST results are available for this feature:

BLAST of MELO3C003880.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466608.1	3.1e-120	100.00	PREDICTED: uncharacterized protein LOC103503976 [Cucumis melo]	[more]
XP_004147794.1	1.1e-117	98.66	PREDICTED: uncharacterized protein LOC101206163 [Cucumis sativus] >KGN59933.1 hy...	[more]
XP_022144972.1	1.5e-111	95.07	uncharacterized protein LOC111013658 isoform X2 [Momordica charantia]	[more]
XP_022939982.1	3.4e-111	95.52	uncharacterized protein LOC111445752 isoform X2 [Cucurbita moschata] >XP_0235232...	[more]
XP_022982127.1	5.8e-111	95.07	uncharacterized protein LOC111481057 isoform X1 [Cucurbita maxima]	[more]

BLAST of MELO3C003880.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19330.3	3.5e-86	75.11	unknown protein	[more]
AT1G75060.1	1.2e-78	71.43	unknown protein	[more]

BLAST of MELO3C003880.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C003880.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRQ8\|A0A1S3CRQ8_CUCME	2.0e-120	100.00	uncharacterized protein LOC103503976 OS=Cucumis melo OX=3656 GN=LOC103503976 PE=...	[more]
tr\|A0A0A0LDS8\|A0A0A0LDS8_CUCSA	7.2e-118	98.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855270 PE=4 SV=1	[more]
tr\|A0A2R6R3J2\|A0A2R6R3J2_ACTCH	4.8e-106	89.24	Histone deacetylase complex subunit like OS=Actinidia chinensis var. chinensis O...	[more]
tr\|M5XGR5\|M5XGR5_PRUPE	5.3e-105	87.44	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G383300 PE=4 SV=1	[more]
tr\|A0A151RBL7\|A0A151RBL7_CAJCA	6.5e-103	86.55	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_038783 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR024145	His_deAcase_SAP30/SAP30L
IPR025718	SAP30_Sin3-bd
IPR038291	SAP30_C_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016575	histone deacetylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0000118	histone deacetylase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004407	histone deacetylase activity
molecular_function	GO:0003712	transcription cofactor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003880.2.1	MELO3C003880.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038291	SAP30, C-terminal domain superfamily	GENE3D	G3DSA:1.10.720.110		coord: 139..223 e-value: 1.8E-16 score: 61.7
IPR025718	Histone deacetylase complex subunit SAP30, Sin3 binding domain	PFAM	PF13867	SAP30_Sin3_bdg	coord: 163..216 e-value: 8.0E-22 score: 77.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR13286:SF8	SUBFAMILY NOT NAMED	coord: 20..221
IPR024145	Histone deacetylase complex subunit SAP30/SAP30-like	PANTHER	PTHR13286	SAP30	coord: 20..221

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C003880.2	Csa3G855270	Cucumber (Chinese Long) v2	cumedB208
MELO3C003880.2	CSPI03G42470	Wild cucumber (PI 183967)	cpimedB209
MELO3C003880.2	Cucsa.342130	Cucumber (Gy14) v1	cgymedB560
MELO3C003880.2	CmaCh09G001730	Cucurbita maxima (Rimu)	cmamedB031
MELO3C003880.2	CmaCh01G018890	Cucurbita maxima (Rimu)	cmamedB487
MELO3C003880.2	CmoCh01G019520	Cucurbita moschata (Rifu)	cmomedB474
MELO3C003880.2	CmoCh09G001700	Cucurbita moschata (Rifu)	cmomedB020
MELO3C003880.2	Lsi04G016400	Bottle gourd (USVL1VR-Ls)	lsimedB325
MELO3C003880.2	Cp4.1LG06g01220	Cucurbita pepo (Zucchini)	cpemedB859
MELO3C003880.2	Cp4.1LG02g07350	Cucurbita pepo (Zucchini)	cpemedB614
MELO3C003880.2	CsGy3G039990	Cucumber (Gy14) v2	cgybmedB186
MELO3C003880.2	Cla020742	Watermelon (97103) v1	medwmB364
MELO3C003880.2	ClCG05G019190	Watermelon (Charleston Gray)	medwcgB325
MELO3C003880.2	Cla97C05G100710	Watermelon (97103) v2	medwmbB319
MELO3C003880.2	Bhi11G002156	Wax gourd	medwgoB386
MELO3C003880.2	Carg17128	Silver-seed gourd	carmedB0934
MELO3C003880.2	Carg08739	Silver-seed gourd	carmedB0108
MELO3C003880.2	CsaV3_3G044890	Cucumber (Chinese Long) v3	cucmedB212

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None