Carg04071 (gene) Silver-seed gourd

Overview
NameCarg04071
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHistone deacetylase complex subunit SAP30/SAP30-like
LocationCucurbita_argyrosperma_scaffold_011 : 1697962 .. 1701185 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCGTGTTTTTTCTCAGCGAAAAAAATCCCAAAAAATTTCCCACTGATCTCTCAAATTCCCACTGTTCTGTTCCCCATTGCATGGCCTTTCTTCTACGTCGATTCTTCCATCTTCATATGTGAATTTCTTCTCTGTTTTTCCCCTTTTTGAGAATCTCCATTTCAGTTTCAGAGATTTGGAAATGATTGAAGCTGTGCAGAGTTCCATCAATGGCGCTTTCTCGCAGTTTCAGAGCTGTGGGGATAGCAGCGAGGAGGAGCTTTCGGTTCTTCCTCGCCATACTAAGGTTGTCGTTACCGGTAATAATCGGACCAAATCGGTTCTCGTCGGACTTCATGGCGTCGTCAAGAAAGCCGTCGGTCTTGGCGGCTGGCATTGGCTGGTATGGATTCTATTAGAAACATTGAATTTCATTGGATTCTCATTGAATTTCTAGATTCTGTGGTTTTCTAGGGTTAATTTCATGTTTTCTTATCAATGTCTGGTCAATTTCTTGCATTTTTCAGTTCAATTTTGTGTATCAGATCTTGATTTGTTGATTTTATTTGGGGTTTAGATCGTGTCTCATTGAATTCTAGATTCGAATTCTCCAATTTCTATCTTCTTCTCTTTAGTTGCATGTTTATTTAATCATTGGATCTCGTAATTGTGATAGTTTTTTCATGATTGCTTTGCTTATTAACTTTTGTTTATGCTGATTTAATTTGTTAGATGGAATCATGAGGGGTTTTGATTGTTAGGACTGTAAGTTATGATAATTTTTCATGAATGTGGGTTTGAATTGAGGGGAAATGCAGGTTTTAACAAATGGTATAGAGGTGAAACTACAGCGGAATGCACTTAGTGTGATCGAGGCTCCAACGGGCAATGAAGAAGATGATGAACTCGAATTCGAGAACTCGACATGGAATGGATTGGATATGGGTGAGTTTTGCATCTGCTGATGGTTCAATGTCTTTGCTCAATCATTCTTCCTTTGCTATTTTTGTTGGCTGTCTTAGAATTGAGTTTATCCTATAATTGTTGATTGTTTGTGTCTTGTGTCTGGCTGTTTTTGGATTGATGTCTTGTTTCTTTCTCTTATTAACTTGTTAGGAGTTAATGATTTGATCATTTGAAGTGAGGATCATTTTTCGTCCCCACCCACCAAATCCCTTTTTGTTGTTGTGGTTTTTATTTCGGTTGGAGAGAAGAATGAAACATTCTTTATAAGGGTCTGGAAACCTCTCTCTAGTAGACACATTGTAAAAACCGTCTGGTTGACGGCGATACAGGCCAAAGCCAACAACATCTACTAGTGGTAGGTTTGGGGGGTTACAAATAGTATCAGAGTTAGACACTAGGCAGTGTGCTTGCGAGGAGGCTGGGCACCCAAGGGGGTGGATTGTGAGATCTCACATCAGTTAGAGAGAACGAAACATGCCTTATAAGGGTGTGGAAACCTCTCTCTAGTAGACGTGTTTTAAAAACTGTGAGGCTGACGATATTTGCTAGCGATGGGTTTAGGAGGTTACAAATGATATCAAAGCTAGACACCGTGCGGTGTGCCAGCAGAGATGCTGGGCGCCCAAGTGGGGTGGATTGTGAGATCCCACATTGGTTAGAGACTGGGACGAAACATTTCTTATAAGGGTGGTCAAAGCAAACAATATCTGCTAGCGGTGGGTTTGCCATGTTTTAGTTTCGAGTCTACCATGATTAAAGCATAAGAACTTTAACCTTTACAAGTATCTTCAGTCCAATTCTTGAAAAGGGTTTCGAAAACGAAAATAAGTTGTAAATTCTTCTCCGACCAGAAGTTGTGGCATTAGGTTGCTATTGATGACAACATAGGATCCTTTGTGAGCTCACTTTATATTTTGTCTTGAATTGTTGTTCTCTTCATGTTCTTTATCCTTTTCTGACCCTTTATCACTCATTCACGATAATGCTCTCAACTATTCATTATTCTCAGCATCTGATGACGCCCAAAAATCCCACAAATCAAGGCATAAATTTCACAAATCATGTGGGTCATCTCACAAGACTATAAGCAGATCGCTTTCCTGCGACTCACAGTCGAAGAGCTCGGTTTCTGCACCGCAACGATCCATGGTATATTCCTTCAATGGTTTGTACGTCAAAACATGTTTAGCCTCGTAGTTTGAATCAATTCCCTGATGTGTTATCTCTTCCTATGTAGAGGGTTGACCTTAGTAAACTAGAGATGACTGCATTGTGGAGATACTGGCGACACTTCAATCTCGTAAGTTTTGAAGGTCGATTCGGTTCAATAGTCGTTACTACGAAATCTCTTTCTTTCCTTAGCGATCGATGGGTTTGTGCAGGTTGATGCCTTTCCCAACCCGTCGAAAGAGCAATTAGTAGATCTAGTTCAAAGGCATTTCATGTCACTGGTACTCGACCACGCCTTACTTCCTAAAACCACTATCAAACGATCCTATTTTCACATGGATCGAAACCGTTTTTCCTTCTATCTATTGACGATTTCTTTCTTTTTCGGTTGCGAAGCAACTGGATGAGTTGCAGGTTATAATGGGTTTTGTGAAGGCTGCAAAGAGACTGAAAACAGTGTGCAAATGAGAGGAGAGGAACTGGGGAATCCATTGAGTTGATTCTCATGCTAACAGATAATTCAGGTGAATGAGAAGTGTTTAGGTTCTCTCTGTAACATATGGATCGATCGATCGGAAATGGGTTTTGTGGGTCGAGATCGGAACGGGTTAGTATGATTCTGTTGTAGTTAATAGAGTAATATCTTGTTTTAGTGACGATGTTACTTGCAGTGTAGATATGTGTAAACTGCAAATATTAGAGACCAAAAAACATGTTTCTAAGCTTTTGTTTAATGTAATGCTGACTGACTTTAGGGGTGTTTTGATTGCCCAAAAAATGTACAAATTTTGCTGTTCCATATCCTAATGTTATGAGTTTTATCTACATTGTTTCTTCTGTTCATTATGCCTCTTTGCTAATCGTCGCCCGGAGATGAAGCATTCCGGCGAATCTCCCTTGCGTCGGACTCTCTGGTTCAAGTGTAAAAACCGTAGCTCCTTCCATACCTGGTTCTTCGAGGAAGAACCTTCGTAGAATCTGGAACGACTAACGTTCTTTTGGAACTTGGACGAATTGGAACCTTTGTTCGAGACTTGAAACTTATGGGGCGGTGGCAAACGAAAGTTCATTGGGGATGATGGTGAGCAAATGGGTTTGTGAATAGAGA

mRNA sequence

GCCGTGTTTTTTCTCAGCGAAAAAAATCCCAAAAAATTTCCCACTGATCTCTCAAATTCCCACTGTTCTGTTCCCCATTGCATGGCCTTTCTTCTACGTCGATTCTTCCATCTTCATATGTGAATTTCTTCTCTGTTTTTCCCCTTTTTGAGAATCTCCATTTCAGTTTCAGAGATTTGGAAATGATTGAAGCTGTGCAGAGTTCCATCAATGGCGCTTTCTCGCAGTTTCAGAGCTGTGGGGATAGCAGCGAGGAGGAGCTTTCGGTTCTTCCTCGCCATACTAAGGTTGTCGTTACCGGTAATAATCGGACCAAATCGGTTCTCGTCGGACTTCATGGCGTCGTCAAGAAAGCCGTCGGTCTTGGCGGCTGGCATTGGCTGGTTTTAACAAATGGTATAGAGGTGAAACTACAGCGGAATGCACTTAGTGTGATCGAGGCTCCAACGGGCAATGAAGAAGATGATGAACTCGAATTCGAGAACTCGACATGGAATGGATTGGATATGGCATCTGATGACGCCCAAAAATCCCACAAATCAAGGCATAAATTTCACAAATCATGTGGGTCATCTCACAAGACTATAAGCAGATCGCTTTCCTGCGACTCACAGTCGAAGAGCTCGGTTTCTGCACCGCAACGATCCATGAGGGTTGACCTTAGTAAACTAGAGATGACTGCATTGTGGAGATACTGGCGACACTTCAATCTCGTTGATGCCTTTCCCAACCCGTCGAAAGAGCAATTAGTAGATCTAGTTCAAAGGCATTTCATGTCACTGCAACTGGATGAGTTGCAGGTTATAATGGGTTTTGTGAAGGCTGCAAAGAGACTGAAAACAGTGTGCAAATGAGAGGAGAGGAACTGGGGAATCCATTGAGTTGATTCTCATGCTAACAGATAATTCAGGTGAATGAGAAGTGTTTAGGTTCTCTCTGTAACATATGGATCGATCGATCGGAAATGGGTTTTGTGGGTCGAGATCGGAACGGGTTAGTATGATTCTGTTGTAGTTAATAGAGTAATATCTTGTTTTAGTGACGATGTTACTTGCAGTGTAGATATGTGTAAACTGCAAATATTAGAGACCAAAAAACATGTTTCTAAGCTTTTGTTTAATGTAATGCTGACTGACTTTAGGGGTGTTTTGATTGCCCAAAAAATGTACAAATTTTGCTGTTCCATATCCTAATGTTATGAGTTTTATCTACATTGTTTCTTCTGTTCATTATGCCTCTTTGCTAATCGTCGCCCGGAGATGAAGCATTCCGGCGAATCTCCCTTGCGTCGGACTCTCTGGTTCAAGTGTAAAAACCGTAGCTCCTTCCATACCTGGTTCTTCGAGGAAGAACCTTCGTAGAATCTGGAACGACTAACGTTCTTTTGGAACTTGGACGAATTGGAACCTTTGTTCGAGACTTGAAACTTATGGGGCGGTGGCAAACGAAAGTTCATTGGGGATGATGGTGAGCAAATGGGTTTGTGAATAGAGA

Coding sequence (CDS)

ATGATTGAAGCTGTGCAGAGTTCCATCAATGGCGCTTTCTCGCAGTTTCAGAGCTGTGGGGATAGCAGCGAGGAGGAGCTTTCGGTTCTTCCTCGCCATACTAAGGTTGTCGTTACCGGTAATAATCGGACCAAATCGGTTCTCGTCGGACTTCATGGCGTCGTCAAGAAAGCCGTCGGTCTTGGCGGCTGGCATTGGCTGGTTTTAACAAATGGTATAGAGGTGAAACTACAGCGGAATGCACTTAGTGTGATCGAGGCTCCAACGGGCAATGAAGAAGATGATGAACTCGAATTCGAGAACTCGACATGGAATGGATTGGATATGGCATCTGATGACGCCCAAAAATCCCACAAATCAAGGCATAAATTTCACAAATCATGTGGGTCATCTCACAAGACTATAAGCAGATCGCTTTCCTGCGACTCACAGTCGAAGAGCTCGGTTTCTGCACCGCAACGATCCATGAGGGTTGACCTTAGTAAACTAGAGATGACTGCATTGTGGAGATACTGGCGACACTTCAATCTCGTTGATGCCTTTCCCAACCCGTCGAAAGAGCAATTAGTAGATCTAGTTCAAAGGCATTTCATGTCACTGCAACTGGATGAGTTGCAGGTTATAATGGGTTTTGTGAAGGCTGCAAAGAGACTGAAAACAGTGTGCAAATGA

Protein sequence

MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKSRHKFHKSCGSSHKTISRSLSCDSQSKSSVSAPQRSMRVDLSKLEMTALWRYWRHFNLVDAFPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK
Homology
[Close]
BLAST of Carg04071 vs. NCBI nr
Match: XP_022951480.1 (uncharacterized protein LOC111454286 [Cucurbita moschata])

HSP 1 Score: 376.7 bits (966), Expect = 5.4e-101
Identity = 194/223 (87.00%), Postives = 194/223 (87.00%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG
Sbjct: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
           R                             APQRSMRVDLSKLEMTALWRYWRHFNLVDA
Sbjct: 121 RHKFHKSCGSSNKTISRSLSCDSQSKSSVSAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
           FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of Carg04071 vs. NCBI nr
Match: XP_023536801.1 (uncharacterized protein LOC111798076 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.7 bits (966), Expect = 5.4e-101
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG
Sbjct: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
           RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA
Sbjct: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
           FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of Carg04071 vs. NCBI nr
Match: XP_023002140.1 (uncharacterized protein LOC111496089 [Cucurbita maxima])

HSP 1 Score: 374.8 bits (961), Expect = 2.1e-100
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAVQ SINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG
Sbjct: 1   MIEAVQRSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
           RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA
Sbjct: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
           FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of Carg04071 vs. NCBI nr
Match: XP_008444685.1 (PREDICTED: uncharacterized protein LOC103487947 isoform X2 [Cucumis melo] >XP_011649605.1 PREDICTED: uncharacterized protein LOC101220556 isoform X2 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 205/223 (91.93%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAV+SSING FS  QSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFEN  WN +DMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
           RXXXXXXXXXXXXXXXXXXXXXXXXXXX  APQ S  VDLSKLEM ALWRYWRHFNLVDA
Sbjct: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAPQGS-TVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVDLVQRHFMS QLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 222

[Close]
BLAST of Carg04071 vs. NCBI nr
Match: XP_004152712.1 (PREDICTED: uncharacterized protein LOC101220556 isoform X1 [Cucumis sativus] >XP_008444684.1 PREDICTED: uncharacterized protein LOC103487947 isoform X1 [Cucumis melo] >KGN62574.1 hypothetical protein Csa_2G361400 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 4.8e-89
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAV+SSING FS  QSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFEN  WN +DMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Q S +VDLSKLEM ALWRYWRHFNLVDA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVDLVQRHFMS QLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of Carg04071 vs. TAIR10
Match: AT1G19330.3 (unknown protein)

HSP 1 Score: 278.9 bits (712), Expect = 2.8e-75
Identity = 155/233 (66.52%), Postives = 171/233 (73.39%), Query Frame = 0 

Query: 1   MIEAVQSS--INGAFSQFQS-CGD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVK 60
           M+EAV SS  +NG F Q QS  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVK
Sbjct: 1   MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60

Query: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDM-----AS 120
           KAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDD+L+FEN+  NG DM     AS
Sbjct: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPAS 120

Query: 121 DDAQKSHKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSM-RVDLSKLEMTALWR 180
           +D  K HKS+                              P  +M +VDLSKLEM AL  
Sbjct: 121 EDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLN 180

Query: 181 YWRHFNLVDAFPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
           YWRHFNLVDA PNPSKEQL+D+VQRHFMS Q+DELQVI+GFV+AAKR+K  CK
Sbjct: 181 YWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMKKACK 233

[Close]
BLAST of Carg04071 vs. TAIR10
Match: AT1G75060.1 (unknown protein)

HSP 1 Score: 265.8 bits (678), Expect = 2.4e-71
Identity = 141/217 (64.98%), Postives = 163/217 (75.12%), Query Frame = 0 

Query: 11  GAFSQFQSC-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVGLGGWHWLV 70
           G FSQ QSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVGLGGWHWLV
Sbjct: 17  GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 76

Query: 71  LTNGIEVKLQRNALSVIEAPTGNEEDDELEFENST-WN-GLDMASDDAQKSHKSRXXXXX 130
           LTNGIEVKLQRNALSV+E PTGNEED++LE ++ST WN   DM ++D  K HKS+     
Sbjct: 77  LTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHR 136

Query: 131 XXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDAFPNPSK 190
                                    P+ +M+VDL+KL+M AL RYWRHFNLVDA PNP+K
Sbjct: 137 SSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 196

Query: 191 EQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
           EQL+D++QRHFMS Q+DELQVI+GFV+AA  +K  C+
Sbjct: 197 EQLIDIIQRHFMSQQMDELQVIVGFVQAATGMKKACQ 233

[Close]
BLAST of Carg04071 vs. TrEMBL
Match: tr|A0A1S3BAY6|A0A1S3BAY6_CUCME (uncharacterized protein LOC103487947 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487947 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 8.3e-90
Identity = 205/223 (91.93%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAV+SSING FS  QSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFEN  WN +DMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
           RXXXXXXXXXXXXXXXXXXXXXXXXXXX  APQ S  VDLSKLEM ALWRYWRHFNLVDA
Sbjct: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAPQGS-TVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVDLVQRHFMS QLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 222

[Close]
BLAST of Carg04071 vs. TrEMBL
Match: tr|A0A1S3BAV7|A0A1S3BAV7_CUCME (uncharacterized protein LOC103487947 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487947 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 3.1e-89
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAV+SSING FS  QSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFEN  WN +DMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Q S +VDLSKLEM ALWRYWRHFNLVDA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVDLVQRHFMS QLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of Carg04071 vs. TrEMBL
Match: tr|A0A0A0LNK2|A0A0A0LNK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361400 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 3.1e-89
Identity = 204/223 (91.48%), Postives = 208/223 (93.27%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           MIEAV+SSING FS  QSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFEN  WN +DMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Q S +VDLSKLEM ALWRYWRHFNLVDA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVDLVQRHFMS QLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of Carg04071 vs. TrEMBL
Match: tr|V7ATC3|V7ATC3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G056200g PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 9.2e-89
Identity = 193/223 (86.55%), Postives = 203/223 (91.03%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           M+EA++SS+NG FS  QSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVG
Sbjct: 1   MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFEN  WNG DMASDD QKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
           R XXXXXXXXXXXXXXXXXXXXXXX      P  S +VDLSKLEMTALWRYWRHFNLVDA
Sbjct: 121 RHXXXXXXXXXXXXXXXXXXXXXXXKGSVSMPHGSTKVDLSKLEMTALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVD+VQRHFMS Q+DELQVI+GFV+AAKRLKTVCK
Sbjct: 181 VPNPSKEQLVDIVQRHFMSQQIDELQVIVGFVQAAKRLKTVCK 223

[Close]
BLAST of Carg04071 vs. TrEMBL
Match: tr|A0A0L9V8Z5|A0A0L9V8Z5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g022400 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.2e-88
Identity = 193/223 (86.55%), Postives = 203/223 (91.03%), Query Frame = 0 

Query: 1   MIEAVQSSINGAFSQFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVG 60
           M+EA++SS+NGAFS  QSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGL GVVKKAVG
Sbjct: 1   MLEAMESSVNGAFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDELEFENSTWNGLDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDD+LEFEN  WNG DMASDD QKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKS 120

Query: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPQRSMRVDLSKLEMTALWRYWRHFNLVDA 180
           R XXXXXXXXXXXXXXXXXXXXXXX      P  S +VDLSKLEM ALWRYWRHFNLVDA
Sbjct: 121 RHXXXXXXXXXXXXXXXXXXXXXXXKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 FPNPSKEQLVDLVQRHFMSLQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVD+VQRHFMS Q+DELQVI+GFV+AAKRLKTVCK
Sbjct: 181 VPNPSKEQLVDIVQRHFMSQQIDELQVIVGFVQAAKRLKTVCK 223

The following BLAST results are available for this feature:
BLAST of Carg04071 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951480.15.4e-10187.00uncharacterized protein LOC111454286 [Cucurbita moschata][more]
XP_023536801.15.4e-101100.00uncharacterized protein LOC111798076 [Cucurbita pepo subsp. pepo][more]
XP_023002140.12.1e-10099.55uncharacterized protein LOC111496089 [Cucurbita maxima][more]
XP_008444685.11.3e-8991.93PREDICTED: uncharacterized protein LOC103487947 isoform X2 [Cucumis melo] >XP_01... [more]
XP_004152712.14.8e-8991.48PREDICTED: uncharacterized protein LOC101220556 isoform X1 [Cucumis sativus] >XP... [more]
BLAST of Carg04071 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19330.32.8e-7566.52unknown protein[more]
AT1G75060.12.4e-7164.98unknown protein[more]
BLAST of Carg04071 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg04071 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BAY6|A0A1S3BAY6_CUCME8.3e-9091.93uncharacterized protein LOC103487947 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3BAV7|A0A1S3BAV7_CUCME3.1e-8991.48uncharacterized protein LOC103487947 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LNK2|A0A0A0LNK2_CUCSA3.1e-8991.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361400 PE=4 SV=1[more]
tr|V7ATC3|V7ATC3_PHAVU9.2e-8986.55Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G056200g PE=4 ... [more]
tr|A0A0L9V8Z5|A0A0L9V8Z5_PHAAN1.2e-8886.55Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g022400 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR024145His_deAcase_SAP30/SAP30L
IPR025718SAP30_Sin3-bd
IPR038291SAP30_C_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04071-RACarg04071-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038291SAP30, C-terminal domain superfamilyGENE3DG3DSA:1.10.720.110coord: 138..223
e-value: 1.0E-16
score: 62.5
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domainPFAMPF13867SAP30_Sin3_bdgcoord: 163..216
e-value: 2.4E-20
score: 72.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..131
NoneNo IPR availablePANTHERPTHR13286:SF8SUBFAMILY NOT NAMEDcoord: 20..221
IPR024145Histone deacetylase complex subunit SAP30/SAP30-likePANTHERPTHR13286SAP30coord: 20..221

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg04071Cla022515Watermelon (97103) v1carwmB0978
Carg04071Cla020742Watermelon (97103) v1carwmB0981
Carg04071Csa3G855270Cucumber (Chinese Long) v2carcuB0992
Carg04071Csa2G361400Cucumber (Chinese Long) v2carcuB0989
Carg04071MELO3C010922Melon (DHL92) v3.5.1carmeB0953
Carg04071ClCG08G015330Watermelon (Charleston Gray)carwcgB0958
Carg04071ClCG05G019190Watermelon (Charleston Gray)carwcgB0954
Carg04071CSPI02G19770Wild cucumber (PI 183967)carcpiB1012
Carg04071CSPI03G42470Wild cucumber (PI 183967)carcpiB1015
Carg04071Cucsa.232370Cucumber (Gy14) v1carcgyB1094
Carg04071Cucsa.342130Cucumber (Gy14) v1carcgyB1098
Carg04071CmaCh01G018890Cucurbita maxima (Rimu)carcmaB1352
Carg04071CmaCh05G002240Cucurbita maxima (Rimu)carcmaB1357
Carg04071CmaCh09G001730Cucurbita maxima (Rimu)carcmaB1345
Carg04071CmaCh12G004920Cucurbita maxima (Rimu)carcmaB1349
Carg04071CmoCh01G019520Cucurbita moschata (Rifu)carcmoB1314
Carg04071CmoCh12G004390Cucurbita moschata (Rifu)carcmoB1310
Carg04071CmoCh09G001700Cucurbita moschata (Rifu)carcmoB1307
Carg04071CmoCh05G002310Cucurbita moschata (Rifu)carcmoB1319
Carg04071Lsi04G016400Bottle gourd (USVL1VR-Ls)carlsiB894
Carg04071Lsi08G014170Bottle gourd (USVL1VR-Ls)carlsiB898
Carg04071Cp4.1LG06g01220Cucurbita pepo (Zucchini)carcpeB1365
Carg04071Cp4.1LG02g07350Cucurbita pepo (Zucchini)carcpeB1362
Carg04071Cp4.1LG11g01950Cucurbita pepo (Zucchini)carcpeB1352
Carg04071Cp4.1LG07g04290Cucurbita pepo (Zucchini)carcpeB1368
Carg04071CsGy2G019580Cucumber (Gy14) v2carcgybB0962
Carg04071CsGy3G039990Cucumber (Gy14) v2carcgybB0966
Carg04071MELO3C010922.2Melon (DHL92) v3.6.1carmedB0959
Carg04071CsaV3_3G044890Cucumber (Chinese Long) v3carcucB1020
Carg04071CsaV3_2G028460Cucumber (Chinese Long) v3carcucB1017
Carg04071Cla97C05G100710Watermelon (97103) v2carwmbB1029
Carg04071Cla97C08G158910Watermelon (97103) v2carwmbB1034
Carg04071Bhi04G000247Wax gourdcarwgoB1143
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg04071Carg08739Silver-seed gourdcarcarB126
Carg04071Carg11817Silver-seed gourdcarcarB227
Carg04071Carg17128Silver-seed gourdcarcarB647
The following block(s) are covering this gene:

None