CSPI02G19770 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G19770
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionHistone deacetylase complex subunit SAP30
LocationChr2 : 17790866 .. 17793839 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATTATCGATACCTCTCTCTTACGTGTCATCTTCTTATTTGTCCGTCACCGGTCGTCGGGATTCATAGCAACACCACCACCCACTCAAACAATATCTGTCTTTTTCCTCCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTCTCTGCTTTCACTCCTAAACCGTAATCTCTCTCTGTTTTTTTTTTCTTCCTCTCCCCTCCTTGCTTTCCCCATTGCATGCCCTTTTATCTACGTATTATTTCCCATTTCTTATTTTCCATTTCCTTTTCTGAATCTTCTTTGTTCCCTCGTTTTATCTGAATAACCCCATTTCATTTGGAAATGATTGAAGCTGTGGAGAGTTCTATCAATGGCGGGTTCTCCCATTTGCAGAGCTGTGGGGATAGTAGTGAGGAAGAGCTTTCCGTGCTTCCTCGCCATACAAAGGTCGTTGTTACTGGAAACAATCGTACCAAATCCGTCCTTGTTGGACTTCAAGGCGTTGTTAAGAAAGCCGTTGGGCTTGGCGGGTGGCATTGGCTGGTGATTTCTCTTTTTTTGTTTTTTGTTTTTTTTTTTTTACTCGAGTTGGGTTTTTTTAGAAATGGGGTTTTTAACAGACATTGAATTTCTTTGGATTCTCAGTCTGGGTTATAATGTGAGGATTCATTTCATGTTTTCTTATCAATGTCTGTTCAATTTCCCTTTTTTTTTTAGTTCAATTTTGTATATTAGATCTTAGATCGCGTATCAGCCAATTCTGGATTTGAGTATTTTTGCTTTACTCGTTGTTATTAACTCAGAATACAGGGTTTTCTTTACTGTAATTTGGATTTAATAGAGAACTGGTTTTTTGGGATGGCATCTTCAATTTCTATCTATATTATTCTCTATTGCATGTTCGTTTAATCATTGGATCTCATGATTATATCAGTTTTCCCAAATCTACAATGAATTTGATACCCATTTTCTTAATACCTCGGCCGTTTTCTGGGCAGGATTGTTTTATTTTCTTTGCTCTTGTTTGGCCTAATTCAACGTATTAGATGAAATTATGATGGGTTTTTTTATCACTTGAATTGGAGTTGAAATTTTCCCTTTTTTTTTCTGCTTCATTTAAGTTGTGATTTCGGTGTGTTATTGGATGCTCATTTCTTTCTCGATTATTAGGAATTAGGTTTTTTGGTTTTGATTCATTTTTCCTGGATGTGACTTGGAATGGGGATTACTTGCAGGTTCTAACAAATGGTATAGAGGTGAAACTACAGCGGAATGCGCTTAGTGTGATCGAGGCTCCGACGGGTAATGAGGAAGACGATGATCTCGAATTTGAGAACTTGCAATGGAATAGAATTGATATGGGTGGGTCTCGCAGCTAATGATCCAATTCAATGTCTCAGCTCAATCATTCTTCTTTTTCTAATTTTATTAGCTGTCTTAGAATAGATTTGAGTTTATCCCATAACTGTTGTCTATCTTTGTCTGGTTGGCTTTGGATTCATGTCCTGTTTTTTCTCTTGATAACTTGTTGCAAGTAAAATCGTATAGTTCTGCCTCTTTTTCTGAACCACAGCCGTATATTTATGCTTTTTTGAACCAAATATCGGCAGAAACAAGTTTTAGGTCTGGTATCTACAGTGATTTCTAGTGCGGAAGAACCCTAACCCTCACAAATATCTTCACTGCAATTCTTGAAAATGAAAATAAGTTGCAAGTTCTTTGAAAATTAGCAGTGGTGGAGCAGCAGTAGGGATAACTTAATAATCTTGGTCGAGTGTTTGTTGGTTCTAGATAGTGTTGACCGCAGCATAGGATCCTTTGTGAATTCACTTTTTACTTTTCCTCTTCTTGAATTGTTCTTCTCCACATTTTCTTTTATCTTTTTTCTGACCCCTGTCACTCATTCATGATAACATTTTCAACTGTTCTTGATTCTCAGCATCTGATGACGCCCAAAAATCCCACAAATCAAGGCATAAGTTACACAAATCATCTGGATCATCTCACAAGACAATGAGTAGATCTCTTTCCTGTGACTCACAGTCAAAGAGCTCGGTTTCTGCACCTCAAGGATCCACGGTATATTCGTTTAATGTTGTGTATTGCAAAATGTGTATAATTGCCTTGCAATTTAAACTAATTCCCCCTTGTATTGTCGCCTCCCATGTAGAAGGTTGACCTTAGTAAATTGGAGATGGCTGCACTGTGGAGATATTGGCGACACTTTAATCTGGTAAGTTTCGAATGCCGATGCCTTGTTTGTTATGAAGTTTCTTTCGTTACCTAAAAATCAATGGACTTTACCTGGAAATCCGTGGATTTGTGCAGGTAGATGCCATTCCAAACCCGTCAAAAGAGCAATTGGTAGACCTAGTTCAGAGGCATTTCATGTCACAGGTAGTTGGAGTTTTCCCCCTTCTTACATAGAAAACTGTTCTTCCATGTTGCATAGAATAATTGTTTTGACTTATTGTAAGATCATTTCTTTCTTTTCTGGTTGTGTAGCAACTGGATGAGTTGCAGGTCATAATGGGTTTTGTGAAGGCTGCAAAGAGGCTGAAGACAGTGTGCAAATGAGAAGAGTAGAGAAACTGGCGAATCCATTAAGTTGATTCCCATGCTAACAGATAATTCAGCTGAATCAAAAAGAAAAAAAATGTTTCAATTCTATCTGTAACATATGTATCGATCGATCGCAAATGGTTTTTGTCTTTCTGGTCGGGATTAGAAGGGGGGTGTCAGCACGATCCTATCGTAGTAGTTAATAGAGTAATATCTTGTTTTAGTGACGATGTTACTTGTAAGTTGTGATGTAGATATGTGTAAACTGCAAATATTAGAGACCTATGAGAGAGAAATGCCCCAAATGACTTGCTTTTCTAAGGCTTTGTTTAATGTAATGCTGACTAACTTTTGGGGTTTCCATTGCCCAAAAATGTACATATTTTGTTGTTTGCTGTTTCCAAATCCC

mRNA sequence

ATGATTGAAGCTGTGGAGAGTTCTATCAATGGCGGGTTCTCCCATTTGCAGAGCTGTGGGGATAGTAGTGAGGAAGAGCTTTCCGTGCTTCCTCGCCATACAAAGGTCGTTGTTACTGGAAACAATCGTACCAAATCCGTCCTTGTTGGACTTCAAGGCGTTGTTAAGAAAGCCGTTGGGCTTGGCGGGTGGCATTGGCTGGTTCTAACAAATGGTATAGAGGTGAAACTACAGCGGAATGCGCTTAGTGTGATCGAGGCTCCGACGGGTAATGAGGAAGACGATGATCTCGAATTTGAGAACTTGCAATGGAATAGAATTGATATGGCATCTGATGACGCCCAAAAATCCCACAAATCAAGGCATAAGTTACACAAATCATCTGGATCATCTCACAAGACAATGAGTAGATCTCTTTCCTGTGACTCACAGTCAAAGAGCTCGGTTTCTGCACCTCAAGGATCCACGAAGGTTGACCTTAGTAAATTGGAGATGGCTGCACTGTGGAGATATTGGCGACACTTTAATCTGGTAGATGCCATTCCAAACCCGTCAAAAGAGCAATTGGTAGACCTAGTTCAGAGGCATTTCATGTCACAGCAACTGGATGAGTTGCAGGTCATAATGGGTTTTGTGAAGGCTGCAAAGAGGCTGAAGACAGTGTGCAAATGA

Coding sequence (CDS)

ATGATTGAAGCTGTGGAGAGTTCTATCAATGGCGGGTTCTCCCATTTGCAGAGCTGTGGGGATAGTAGTGAGGAAGAGCTTTCCGTGCTTCCTCGCCATACAAAGGTCGTTGTTACTGGAAACAATCGTACCAAATCCGTCCTTGTTGGACTTCAAGGCGTTGTTAAGAAAGCCGTTGGGCTTGGCGGGTGGCATTGGCTGGTTCTAACAAATGGTATAGAGGTGAAACTACAGCGGAATGCGCTTAGTGTGATCGAGGCTCCGACGGGTAATGAGGAAGACGATGATCTCGAATTTGAGAACTTGCAATGGAATAGAATTGATATGGCATCTGATGACGCCCAAAAATCCCACAAATCAAGGCATAAGTTACACAAATCATCTGGATCATCTCACAAGACAATGAGTAGATCTCTTTCCTGTGACTCACAGTCAAAGAGCTCGGTTTCTGCACCTCAAGGATCCACGAAGGTTGACCTTAGTAAATTGGAGATGGCTGCACTGTGGAGATATTGGCGACACTTTAATCTGGTAGATGCCATTCCAAACCCGTCAAAAGAGCAATTGGTAGACCTAGTTCAGAGGCATTTCATGTCACAGCAACTGGATGAGTTGCAGGTCATAATGGGTTTTGTGAAGGCTGCAAAGAGGCTGAAGACAGTGTGCAAATGA
Homology
[Close]
BLAST of CSPI02G19770 vs. TrEMBL
Match: A0A0A0LNK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361400 PE=4 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 4.6e-119
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA
Sbjct: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of CSPI02G19770 vs. TrEMBL
Match: A0A151RBL7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_038783 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 7.4e-109
Identity = 201/223 (90.13%), Postives = 213/223 (95.52%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           M+EA+ESS+NGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFEN+QWN  DMASDD QKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RH++H++ GSSHKTMSRS S DSQSK SVS P GST VDLSKLEMAALWRYWRHFNLVDA
Sbjct: 121 RHRMHRALGSSHKTMSRSFSGDSQSKGSVSMPHGSTMVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           +PNPSKEQLVD+VQRHFMSQQ+DELQVIMGFV+AAKRLKTVCK
Sbjct: 181 VPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRLKTVCK 223

[Close]
BLAST of CSPI02G19770 vs. TrEMBL
Match: E0CQ00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g11970 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.2e-108
Identity = 200/223 (89.69%), Postives = 214/223 (95.96%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           M+EAVESS+NGGFS LQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFSQLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFEN+QWN  DMASDD QKSH+S
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHRS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RH+ HKSSGSSHKTMSRSLSCDSQSK S+S P+GSTKVDLSKLEMAALWRY RHFNLVD 
Sbjct: 121 RHRTHKSSGSSHKTMSRSLSCDSQSKGSISTPRGSTKVDLSKLEMAALWRYLRHFNLVDG 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           IPNPSKEQL+D+VQRHF++QQ+DELQVI+GFV+AAKRLKTVCK
Sbjct: 181 IPNPSKEQLIDVVQRHFVTQQMDELQVIVGFVQAAKRLKTVCK 223

[Close]
BLAST of CSPI02G19770 vs. TrEMBL
Match: A0A061FCF3_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_033988 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 2.8e-108
Identity = 201/224 (89.73%), Postives = 215/224 (95.98%), Query Frame = 1 

Query: 1   MIEAVESSINGG-FSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV 60
           M+EA+ESS+NGG FS LQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV
Sbjct: 1   MLEAMESSVNGGGFSQLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAV 60

Query: 61  GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHK 120
           GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFEN+QWN  D+ASDD QKSH+
Sbjct: 61  GLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDLASDDTQKSHR 120

Query: 121 SRHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVD 180
           SRH+ HKS+GSSHKTMSRSLSCDS SK SVS P+GSTKVDLSKLEMAALWRYWRHFNLVD
Sbjct: 121 SRHRTHKSTGSSHKTMSRSLSCDSHSKGSVSTPRGSTKVDLSKLEMAALWRYWRHFNLVD 180

Query: 181 AIPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           AIPNPSKEQL+D+VQRHFMSQQ+DELQVI+GFV+AAKRLKTVCK
Sbjct: 181 AIPNPSKEQLIDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVCK 224

[Close]
BLAST of CSPI02G19770 vs. TrEMBL
Match: V7ATC3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G056200g PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.7e-108
Identity = 199/223 (89.24%), Postives = 212/223 (95.07%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           M+EA+ESS+NGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFEN+QWN  DMASDD QKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RH++H++ GSSHKTMSRS S DS SK SVS P GSTKVDLSKLEM ALWRYWRHFNLVDA
Sbjct: 121 RHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMTALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           +PNPSKEQLVD+VQRHFMSQQ+DELQVI+GFV+AAKRLKTVCK
Sbjct: 181 VPNPSKEQLVDIVQRHFMSQQIDELQVIVGFVQAAKRLKTVCK 223

[Close]
BLAST of CSPI02G19770 vs. TAIR10
Match: AT1G19330.3 (AT1G19330.3 unknown protein)

HSP 1 Score: 322.0 bits (824), Expect = 2.9e-88
Identity = 179/233 (76.82%), Postives = 197/233 (84.55%), Query Frame = 1 

Query: 1   MIEAVESS--INGGFSHLQSC-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60
           M+EAV+SS  +NGGF  +QS  GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK
Sbjct: 1   MLEAVDSSGVVNGGFPQIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVK 60

Query: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDM-----AS 120
           KAVGLGGWHWLVLTNGIEVKLQRNALSV+E PTGNEEDDDL+FEN Q N  DM     AS
Sbjct: 61  KAVGLGGWHWLVLTNGIEVKLQRNALSVLEPPTGNEEDDDLDFENTQRNGSDMIVSFPAS 120

Query: 121 DDAQKSHKSRHKLHKSSGSSHKTMSRSLSCDSQSKSS-VSAPQGSTKVDLSKLEMAALWR 180
           +D  K HKS+ +  +SS SSHKTMSRSLS DSQSKSS  + P+   KVDLSKLEM AL  
Sbjct: 121 EDTLKPHKSKLRGQRSSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLN 180

Query: 181 YWRHFNLVDAIPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           YWRHFNLVDAIPNPSKEQL+D+VQRHFMSQQ+DELQVI+GFV+AAKR+K  CK
Sbjct: 181 YWRHFNLVDAIPNPSKEQLIDIVQRHFMSQQMDELQVIVGFVQAAKRMKKACK 233

[Close]
BLAST of CSPI02G19770 vs. TAIR10
Match: AT1G75060.1 (AT1G75060.1 unknown protein)

HSP 1 Score: 297.4 bits (760), Expect = 7.6e-81
Identity = 158/217 (72.81%), Postives = 183/217 (84.33%), Query Frame = 1 

Query: 11  GGFSHLQSC-GD-SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 70
           GGFS LQSC GD SSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV
Sbjct: 17  GGFSQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLV 76

Query: 71  LTNGIEVKLQRNALSVIEAPTGNEEDDDLEFEN-LQWNR-IDMASDDAQKSHKSRHKLHK 130
           LTNGIEVKLQRNALSV+E PTGNEED+DLE ++  QWN   DM ++D  K HKS+ + H+
Sbjct: 77  LTNGIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHR 136

Query: 131 SSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDAIPNPSK 190
           SS  S K + R +SCDS SK S   P+ + KVDL+KL+MAAL RYWRHFNLVDA+PNP+K
Sbjct: 137 SSRLSQKALYREVSCDSHSKISSITPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 196

Query: 191 EQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           EQL+D++QRHFMSQQ+DELQVI+GFV+AA  +K  C+
Sbjct: 197 EQLIDIIQRHFMSQQMDELQVIVGFVQAATGMKKACQ 233

[Close]
BLAST of CSPI02G19770 vs. NCBI nr
Match: gi|449470011|ref|XP_004152712.1| (PREDICTED: uncharacterized protein LOC101220556 isoform X1 [Cucumis sativus])

HSP 1 Score: 435.3 bits (1118), Expect = 6.6e-119
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA
Sbjct: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 223

[Close]
BLAST of CSPI02G19770 vs. NCBI nr
Match: gi|659087881|ref|XP_008444685.1| (PREDICTED: uncharacterized protein LOC103487947 isoform X2 [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 6.2e-117
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGST VDLSKLEMAALWRYWRHFNLVDA
Sbjct: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGST-VDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK
Sbjct: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 222

[Close]
BLAST of CSPI02G19770 vs. NCBI nr
Match: gi|1009134717|ref|XP_015884599.1| (PREDICTED: uncharacterized protein LOC107420216 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 402.9 bits (1034), Expect = 3.6e-109
Identity = 200/223 (89.69%), Postives = 215/223 (96.41%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           M+EAVESS+NGGF+ LQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAVESSVNGGFAQLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEE+DDL+FEN+QWN  DMASDD QKSH+S
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEEDDLDFENMQWNGSDMASDDTQKSHRS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RH++HKSSGSSHKTM RSLSCDSQSK S+S P+GSTKVDLSKLEMAALWRYWRHFNLVDA
Sbjct: 121 RHRVHKSSGSSHKTMCRSLSCDSQSKGSISTPRGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
            PNPSKEQLVD+VQRHFMSQQ+DELQVI+GFV+AAKRLKTVCK
Sbjct: 181 FPNPSKEQLVDVVQRHFMSQQIDELQVIVGFVQAAKRLKTVCK 223

[Close]
BLAST of CSPI02G19770 vs. NCBI nr
Match: gi|1012328253|gb|KYP39907.1| (hypothetical protein KK1_038783 [Cajanus cajan])

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-108
Identity = 201/223 (90.13%), Postives = 213/223 (95.52%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           M+EA+ESS+NGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFEN+QWN  DMASDD QKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RH++H++ GSSHKTMSRS S DSQSK SVS P GST VDLSKLEMAALWRYWRHFNLVDA
Sbjct: 121 RHRMHRALGSSHKTMSRSFSGDSQSKGSVSMPHGSTMVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           +PNPSKEQLVD+VQRHFMSQQ+DELQVIMGFV+AAKRLKTVCK
Sbjct: 181 VPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRLKTVCK 223

[Close]
BLAST of CSPI02G19770 vs. NCBI nr
Match: gi|950981255|ref|XP_014502255.1| (PREDICTED: uncharacterized protein LOC106762728 isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 400.6 bits (1028), Expect = 1.8e-108
Identity = 200/223 (89.69%), Postives = 213/223 (95.52%), Query Frame = 1 

Query: 1   MIEAVESSINGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60
           M+EA+ESS+NGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG
Sbjct: 1   MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVG 60

Query: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENLQWNRIDMASDDAQKSHKS 120
           LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFEN+QWN  DMASDD QKSHKS
Sbjct: 61  LGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKS 120

Query: 121 RHKLHKSSGSSHKTMSRSLSCDSQSKSSVSAPQGSTKVDLSKLEMAALWRYWRHFNLVDA 180
           RH++H++ GSSHKTMSRS S DS SK SVS P GSTKVDLSKLEMAALWRYWRHFNLVDA
Sbjct: 121 RHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDA 180

Query: 181 IPNPSKEQLVDLVQRHFMSQQLDELQVIMGFVKAAKRLKTVCK 224
           +PNPSKEQLVD+VQRHFMSQQ+DELQVI+GFV+AAKRLKTVCK
Sbjct: 181 VPNPSKEQLVDIVQRHFMSQQIDELQVIVGFVQAAKRLKTVCK 223

The following BLAST results are available for this feature:
BLAST of CSPI02G19770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G19770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNK2_CUCSA4.6e-119100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361400 PE=4 SV=1[more]
A0A151RBL7_CAJCA7.4e-10990.13Uncharacterized protein OS=Cajanus cajan GN=KK1_038783 PE=4 SV=1[more]
E0CQ00_VITVI2.2e-10889.69Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g11970 PE=4 SV=... [more]
A0A061FCF3_THECC2.8e-10889.73Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_033988 PE=4 SV=1[more]
V7ATC3_PHAVU3.7e-10889.24Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G056200g PE=4 SV=1[more]
BLAST of CSPI02G19770 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19330.32.9e-8876.82 unknown protein[more]
AT1G75060.17.6e-8172.81 unknown protein[more]
BLAST of CSPI02G19770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470011|ref|XP_004152712.1|6.6e-119100.00PREDICTED: uncharacterized protein LOC101220556 isoform X1 [Cucumis sativus][more]
gi|659087881|ref|XP_008444685.1|6.2e-11799.55PREDICTED: uncharacterized protein LOC103487947 isoform X2 [Cucumis melo][more]
gi|1009134717|ref|XP_015884599.1|3.6e-10989.69PREDICTED: uncharacterized protein LOC107420216 isoform X2 [Ziziphus jujuba][more]
gi|1012328253|gb|KYP39907.1|1.1e-10890.13hypothetical protein KK1_038783 [Cajanus cajan][more]
gi|950981255|ref|XP_014502255.1|1.8e-10889.69PREDICTED: uncharacterized protein LOC106762728 isoform X1 [Vigna radiata var. r... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024145His_deAcase_SAP30/SAP30L
IPR025718SAP30_Sin3-bd
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19770.1CSPI02G19770.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024145Histone deacetylase complex subunit SAP30/SAP30-likePANTHERPTHR13286SAP30coord: 11..223
score: 4.4E
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domainPFAMPF13867SAP30_Sin3_bdgcoord: 163..216
score: 2.8
NoneNo IPR availablePANTHERPTHR13286:SF6HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30Lcoord: 11..223
score: 4.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G19770Cla020742Watermelon (97103) v1cpiwmB129
CSPI02G19770Cla022515Watermelon (97103) v1cpiwmB116
CSPI02G19770Csa2G361400Cucumber (Chinese Long) v2cpicuB065
CSPI02G19770Csa3G855270Cucumber (Chinese Long) v2cpicuB070
CSPI02G19770MELO3C010922Melon (DHL92) v3.5.1cpimeB118
CSPI02G19770ClCG08G015330Watermelon (Charleston Gray)cpiwcgB172
CSPI02G19770ClCG05G019190Watermelon (Charleston Gray)cpiwcgB144
CSPI02G19770Lsi08G014170Bottle gourd (USVL1VR-Ls)cpilsiB141
CSPI02G19770Lsi04G016400Bottle gourd (USVL1VR-Ls)cpilsiB115
CSPI02G19770MELO3C010922.2Melon (DHL92) v3.6.1cpimedB114
CSPI02G19770CsaV3_2G028460Cucumber (Chinese Long) v3cpicucB081
CSPI02G19770CsaV3_3G044890Cucumber (Chinese Long) v3cpicucB089
CSPI02G19770Cla97C08G158910Watermelon (97103) v2cpiwmbB166
CSPI02G19770Cla97C05G100710Watermelon (97103) v2cpiwmbB137
CSPI02G19770Bhi04G000247Wax gourdcpiwgoB159
CSPI02G19770Cucsa.232370Cucumber (Gy14) v1cgycpiB341
CSPI02G19770Cucsa.342130Cucumber (Gy14) v1cgycpiB502
CSPI02G19770CmaCh12G004920Cucurbita maxima (Rimu)cmacpiB175
CSPI02G19770CmaCh01G018890Cucurbita maxima (Rimu)cmacpiB440
CSPI02G19770CmaCh05G002240Cucurbita maxima (Rimu)cmacpiB793
CSPI02G19770CmaCh09G001730Cucurbita maxima (Rimu)cmacpiB011
CSPI02G19770CmoCh05G002310Cucurbita moschata (Rifu)cmocpiB782
CSPI02G19770CmoCh01G019520Cucurbita moschata (Rifu)cmocpiB428
CSPI02G19770CmoCh12G004390Cucurbita moschata (Rifu)cmocpiB160
CSPI02G19770CmoCh09G001700Cucurbita moschata (Rifu)cmocpiB002
CSPI02G19770Cp4.1LG11g01950Cucurbita pepo (Zucchini)cpecpiB092
CSPI02G19770Cp4.1LG02g07350Cucurbita pepo (Zucchini)cpecpiB541
CSPI02G19770Cp4.1LG06g01220Cucurbita pepo (Zucchini)cpecpiB773
CSPI02G19770Cp4.1LG07g04290Cucurbita pepo (Zucchini)cpecpiB820
CSPI02G19770CsGy3G039990Cucumber (Gy14) v2cgybcpiB101
CSPI02G19770Carg04071Silver-seed gourdcarcpiB1012
CSPI02G19770Carg17128Silver-seed gourdcarcpiB0983
CSPI02G19770Carg11817Silver-seed gourdcarcpiB0209
CSPI02G19770Carg08739Silver-seed gourdcarcpiB0115
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI02G19770CSPI03G42470Wild cucumber (PI 183967)cpicpiB058
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G19770Cucumber (Gy14) v2cgybcpiB057
CSPI02G19770Watermelon (Charleston Gray)cpiwcgB136
CSPI02G19770Watermelon (97103) v1cpiwmB153