CSPI03G22050 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGCCAAAAATAGTGAAGAAACTTTGCCAGCAAAGGATTGAGTTCCAGCACAATCAACTTAACAGTCTGTCTATCCAGCACAGCAAAAGCATAAAAAATAAGGAATCTTTACAAAGAGAGAATGCAAAATCACATGGGTTTGCTTGGATTCCCAAAGCTTACAGTTCAAACATAAACAGTATTAAATCCCCAATTCCTCCATTTCCATTCTTCTCATTCATAATCTTCAAATTTCTTCTTCTTCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGTTAGTTCTCTGTTCTTGGTTTTCTACTTTTTCTGTTTGTTTCTCGAGAAATTTTGTGGGAAAAAGATACAAAATCCAGAAAATGGGTTTCAAATTTAATTGGAAATAGGGATTGGGGAATTTGGATGGGATCCTTGTTTGAAAAAGAAACAAAATTTACCACTTTTCTCCCTCTAGAAGCTGCTATTTCTTTTTTTTTTTTTTTCTGTTGATTTCTTGAGAAATTTGCTGGGGGGAATGGGAGAGGAATATGAGAATGGCTTTGAAATTAAAACTCTCATCTTCATATCTACAAAGTTGAATCTCCTTAAATAATAAAATGGCCTCTGCTATTTTGAAGAAAAGAGTTCATTTCAAAGGCAAATTTGAGTTGCTGGAATTAGATGGGAACAGCAGAACTAACCTGAAAAAGAAGAACTTTTGTTGGTCTTTCACAGCCAACCACTAAGATTGGAATACAAAATCAACATTTTTCATCTTTCTGTCTTACCATTTTAGAACTTCTATTTTATTTCTTTAAAGAAAGGTTGCTCCGGTAGAACCCCAAAAATAACAATTGGGATTTGATATGTTGCAGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGAAAAAACAGAAGAACAATTACTATGAATTTCATTATTTTCAAGTCTGTGAGAGATGAAAGGAAAGAGGGTGTGGGGTTGTGTTATTCTATATATTTGCCATTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTGAAGCTTGGCAAAGGTTTCATTTGTAGAAAGTGATCTGTTGTATTTTGTATTATAATTTATTTATATATTTTTCATTCTTTT ATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGA ATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGA
BLAST of CSPI03G22050 vs. Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 5.2e-09 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 1
BLAST of CSPI03G22050 vs. Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 6.7e-09 Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 1
BLAST of CSPI03G22050 vs. Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.6e-08 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1
BLAST of CSPI03G22050 vs. TrEMBL
Match: A0A0A0L7T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G355060 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.5e-26 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1
BLAST of CSPI03G22050 vs. TrEMBL
Match: A0A061G4Z7_THECC (Arabinogalactan protein 22 OS=Theobroma cacao GN=TCM_016399 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 4.3e-10 Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of CSPI03G22050 vs. TrEMBL
Match: A0A0D2U9F1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G252400 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 7.3e-10 Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of CSPI03G22050 vs. TrEMBL
Match: B9RIM3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1580600 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.6e-09 Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 1
BLAST of CSPI03G22050 vs. TrEMBL
Match: A9PBL3_POPTR (Arabinogalactan-protein OS=Populus trichocarpa GN=POPTR_0014s09050g PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.7e-09 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 1
BLAST of CSPI03G22050 vs. TAIR10
Match: AT5G24105.1 (AT5G24105.1 arabinogalactan protein 41) HSP 1 Score: 67.4 bits (163), Expect = 4.1e-12 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 1
BLAST of CSPI03G22050 vs. TAIR10
Match: AT5G53250.1 (AT5G53250.1 arabinogalactan protein 22) HSP 1 Score: 61.2 bits (147), Expect = 2.9e-10 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 1
BLAST of CSPI03G22050 vs. TAIR10
Match: AT2G46330.1 (AT2G46330.1 arabinogalactan protein 16) HSP 1 Score: 60.8 bits (146), Expect = 3.8e-10 Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 1
BLAST of CSPI03G22050 vs. TAIR10
Match: AT3G61640.1 (AT3G61640.1 arabinogalactan protein 20) HSP 1 Score: 58.9 bits (141), Expect = 1.4e-09 Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 1
BLAST of CSPI03G22050 vs. NCBI nr
Match: gi|700202730|gb|KGN57863.1| (hypothetical protein Csa_3G355060 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 7.9e-26 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1
BLAST of CSPI03G22050 vs. NCBI nr
Match: gi|659130864|ref|XP_008465391.1| (PREDICTED: arabinogalactan peptide 22 [Cucumis melo]) HSP 1 Score: 104.8 bits (260), Expect = 6.5e-20 Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1
BLAST of CSPI03G22050 vs. NCBI nr
Match: gi|645258212|ref|XP_008234783.1| (PREDICTED: arabinogalactan peptide 20-like [Prunus mume]) HSP 1 Score: 75.9 bits (185), Expect = 3.2e-11 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 1
BLAST of CSPI03G22050 vs. NCBI nr
Match: gi|694321811|ref|XP_009352058.1| (PREDICTED: arabinogalactan peptide 20-like [Pyrus x bretschneideri]) HSP 1 Score: 72.4 bits (176), Expect = 3.6e-10 Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of CSPI03G22050 vs. NCBI nr
Match: gi|590678914|ref|XP_007040434.1| (Arabinogalactan protein 22 [Theobroma cacao]) HSP 1 Score: 71.6 bits (174), Expect = 6.1e-10 Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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