CSPI03G04370 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G04370
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RNA polymerase II elongation factor ELL3 isoform 1
Location	Chr3 : 3561983 .. 3563330 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAAAACTCAACAAAATTCCAATTCCAAACTCAAAATCATCGAAGTTCAAATCTCCAATGGCCGAAACCAAAGATTCCACTGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCAAAACCTCATGATCTCTGTAATTCAACACCACCCATTGCGACAAATTTCTGAAAGCTCCGGCCATTTATTACTCTTAAAGCTTTGGCAAAGAGATGAGCATCTCTTCGGTCTCAGAATCGGACGTCGAGAGACAAAAATGGAGTCATTAAAGCAACAAATCTTTCAACTATGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTCCGGCAGTGTTGATAGGGGCGACGTCTGGGGTGTTCGTGATCGTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAAGGAGAAGACTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTCTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATGATTTTTGTTACTTCCAAGTTCATTCTTTGCGGCTTTTAATTGCCATTCGTCAGGTAAAACCTCCTTATAATGTGATTCTTTTTTCGGTAAATTACAATAAACAACACGAAAGTATGGTAGGAGTTGCCAATTTCTACAAATATTATATGTTCGAAGTTTTAACATCAATTGAGTCAACTTTTATCATTGAAAGTTCCAAGGGGTGTAAGTTGTTACAATTTGCTCTTATTTTTTTTAGGTTTGTTGGTGGCAGCTTAGTTGAATAATTCTTCTTGGATTTTTTTCTCACTATGACAAATGTCAAAATGGGTTGATATTTTGGTTTCTAACAATTTGGGTTTTGATGTAAATAAAGCAGCAGGTGCTTGAAGAATTAAATATGCAATGGAGGATGAAGCAAGATGGGTCCGACATAAAAAATATCATTAGAGGGAAGCAAGGGAGGCTCCATTTTTGTAGAATCTTTACAAATTATGAAGAGAAGGATAGTGAGGAAAGTGTTGGCTTTTGAAGTGAACTAAAAATCAGTGTTAATTAAGGCAACACTGCTTGTGTGACAACTTTTTGTTTTGGCTTTCTAAGCCTAATTAATGACTTGTCAATTTTGAAATTGGCCATATGTAACTTTTTGGCTATTTATTATTTATTATTGATATATACATCCAATTCATTAT

mRNA sequence

ATGGCCGAAACCAAAGATTCCACTGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCAAAACCTCATGATCTCTGTAATTCAACACCACCCATTGCGACAAATTTCTGAAAGCTCCGGCCATTTATTACTCTTAAAGCTTTGGCAAAGAGATGAGCATCTCTTCGGTCTCAGAATCGGACGTCGAGAGACAAAAATGGAGTCATTAAAGCAACAAATCTTTCAACTATGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTCCGGCAGTGTTGATAGGGGCGACGTCTGGGGTGTTCGTGATCGTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAAGGAGAAGACTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTCTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATGATTTTTGTTACTTCCAAGTTCATTCTTTGCGGCTTTTAA

Coding sequence (CDS)

ATGGCCGAAACCAAAGATTCCACTGCTGCCCACATAGTTGAAATCCCAGTAGAACAAGAAAACCACACTCAAAACCTCATGATCTCTGTAATTCAACACCACCCATTGCGACAAATTTCTGAAAGCTCCGGCCATTTATTACTCTTAAAGCTTTGGCAAAGAGATGAGCATCTCTTCGGTCTCAGAATCGGACGTCGAGAGACAAAAATGGAGTCATTAAAGCAACAAATCTTTCAACTATGTTGCTTCTTCTTCCTCTTCCATGCCCTCTCTCTCACTCTCTTGTACACTTCCTCTGATCCCATTGTGTGTAAGAAATGGTGGGTTCCGGCAGTGTTGATAGGGGCGACGTCTGGGGTGTTCGTGATCGTGGTGCAGCTGAAATTGTGGATGTATTGGAAAGCAAGAGGGCAGTTACAGAAGGAGAAGACTGAAAACAGAGCACTTACAAGATGTGTTCAAGAACTTAGAATGAAAGGATCTTGCTTTAATTTGTCTAAAGAACCACAAATTGGGAATAGAATGAAGAGTTCTAGTGTGGAGATTAAATGGGGGCCTCTCACTTGGTTTTCAAGGAATTTCATTACCATTTCTCTTCTTGGCTTTTCTGCCATGATTTTTGTTACTTCCAAGTTCATTCTTTGCGGCTTTTAA

Homology

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BLAST of CSPI03G04370 vs. TrEMBL
Match: A0A0A0L2U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G061020 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 2.9e-118
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
           MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60

Query: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGV 120
           LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGV
Sbjct: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120

Query: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
           FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180

Query: 181 EIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           EIKWGPLTWFSRNFITISLLGFSA+IFVTSKFILCGF
Sbjct: 181 EIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217

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BLAST of CSPI03G04370 vs. TrEMBL
Match: M5WCP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011160mg PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.1e-69
Identity = 137/225 (60.89%), Postives = 176/225 (78.22%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNL-----MISVIQHHPLRQISESSGHLLLLKLWQRD 60
           MAE KD   AH+VEIPV++E H Q L     +IS IQHHPL +ISES GHLLLLKLW+R+
Sbjct: 1   MAEMKD---AHVVEIPVDEE-HQQKLSSAMTIISAIQHHPLMEISESPGHLLLLKLWRRE 60

Query: 61  EHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS---DPIVCKKWWVPAV 120
           E LFG RI R+E++M+S++++IFQLCCFF +FH   +T+L+TSS   +  +CKKWW+P++
Sbjct: 61  EDLFGRRIARKESRMDSIRREIFQLCCFFLIFHGFFMTILFTSSVNSEEHICKKWWIPSI 120

Query: 121 LIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIG 180
           L  +TS VFV +VQ+ L  YWK   QLQ+EKT+NRALTRC+QELRMKG+ F+LSKEPQ G
Sbjct: 121 LSVSTSFVFVFLVQVNLCRYWKVWNQLQREKTDNRALTRCIQELRMKGASFDLSKEPQSG 180

Query: 181 NRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
            RMKSSSVEIKW P+TW S+  ITI L+ F+ ++F  SKF+LCGF
Sbjct: 181 KRMKSSSVEIKWKPVTWCSQYLITICLVCFAGLVFPVSKFMLCGF 221

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BLAST of CSPI03G04370 vs. TrEMBL
Match: V4UTR0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009431mg PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66
Identity = 137/224 (61.16%), Postives = 169/224 (75.45%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMI-----SVIQHHPLRQISESSGHLLLLKLWQRD 60
           MAE KD   AH+VEIPV++E H Q ++      + IQHHPL +IS+S GHLLLLKLWQR+
Sbjct: 1   MAEMKD---AHVVEIPVDEE-HQQKVLCCMNTTTAIQHHPLMEISQSPGHLLLLKLWQRE 60

Query: 61  EHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPI----VCKKWWVPA 120
           E LFG RI  +E++M+S K++IFQLCCFF +FH   LTLL+TSS        C+KWW+P+
Sbjct: 61  EDLFGRRISLKESRMDSSKREIFQLCCFFLVFHGFFLTLLFTSSVSPKYEHTCRKWWIPS 120

Query: 121 VLIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQI 180
           +L  +TS VFV +VQ KL+ YWK   QLQ+EK +NRALTRC+QELRMKG+ F+LSKEP  
Sbjct: 121 ILSLSTSLVFVFLVQFKLYRYWKVCRQLQREKNDNRALTRCIQELRMKGASFDLSKEPLS 180

Query: 181 GNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILC 216
           G RMKSSSVEIKW PLTW S+N ITI LL FS ++F  SKFILC
Sbjct: 181 GKRMKSSSVEIKWKPLTWCSQNVITICLLCFSGLVFPASKFILC 220

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BLAST of CSPI03G04370 vs. TrEMBL
Match: A0A067KJC6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09541 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.3e-65
Identity = 132/228 (57.89%), Postives = 172/228 (75.44%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLM-----ISVIQHHPLRQISESSGHLLLLKLWQRD 60
           MAE KD   AHIVEIPV++E H Q ++     ++ IQ+HPL +IS S GHLLLLKLWQR+
Sbjct: 1   MAELKD---AHIVEIPVDEE-HQQKMLYAMNTVTAIQNHPLAEISHSPGHLLLLKLWQRE 60

Query: 61  EHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS------DPIVCKKWWV 120
           E LF  +I  +ET+M+S+K++IFQLC FF +FH + LT+L++SS      D   CK WW+
Sbjct: 61  EDLFSRKIAAKETRMDSIKREIFQLCSFFLVFHGIFLTILFSSSSDNSSKDHHTCKNWWI 120

Query: 121 PAVLIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEP 180
           P+++  +TS VF+ +VQ+K++ YWK   QLQ+EK +NRALTRC+QELRMKGS F+LSKEP
Sbjct: 121 PSLVSLSTSLVFIFLVQIKVYRYWKVWRQLQREKNDNRALTRCIQELRMKGSSFDLSKEP 180

Query: 181 QIGNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           Q G RMKSSSVEIKW P+TWFS+  ITI L+ FS ++F  SK ILCGF
Sbjct: 181 QSGKRMKSSSVEIKWKPITWFSQYLITICLVCFSGLVFPASKLILCGF 224

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BLAST of CSPI03G04370 vs. TrEMBL
Match: B9T3X2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169980 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-65
Identity = 131/222 (59.01%), Postives = 170/222 (76.58%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNL--MISVIQHHPLRQISESSGHLLLLKLWQRDEHL 60
           MAE KD   AHIVEIPV +E+  + L  M + +Q+HPL +IS S GHLLLLKLWQR+E L
Sbjct: 1   MAEMKD---AHIVEIPVNEEHQEKQLCVMTAALQNHPLTEISSSPGHLLLLKLWQREEDL 60

Query: 61  FGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS----DPIVCKKWWVPAVLI 120
           F  +IG +ET+M+S+K++IFQLC FF +FH + LT+L+TSS    +   CKKWW+P+++ 
Sbjct: 61  FNRKIGVKETRMDSIKREIFQLCSFFLIFHGIFLTILFTSSSDNKEEHTCKKWWIPSLVS 120

Query: 121 GATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNR 180
            +TS VFV + Q+KL+ YWK   QLQ+E+ +NRALTRC+QELRMKGS F+LSKEPQ G R
Sbjct: 121 ISTSLVFVSLAQVKLFRYWKVWKQLQRERNDNRALTRCIQELRMKGSSFDLSKEPQCGKR 180

Query: 181 MKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCG 217
           MKSSSVEIKW P+TW S+  +TI L+ FS ++F  SKFILCG
Sbjct: 181 MKSSSVEIKWKPITWCSQYLVTICLVCFSGLLFPASKFILCG 219

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BLAST of CSPI03G04370 vs. TAIR10
Match: AT5G56120.1 (AT5G56120.1 unknown protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 127/239 (53.14%), Postives = 163/239 (68.20%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNL-------------MISVIQHHPLRQISESSGHLL 60
           MA TKDS   H+VEIPV++E+  +               ++ VIQ HPL +ISES GHLL
Sbjct: 1   MAGTKDS---HVVEIPVDEEHKERQQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLL 60

Query: 61  LLKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS-------- 120
           LLKLWQR+E LF  R+  +E+++ES+K++IFQLCCFF +FH    TL+Y+SS        
Sbjct: 61  LLKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSDDADVV 120

Query: 121 -DPIVCKKWWVPAVLIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRM 180
               VCKKWW+P+ +  ATS V V +VQ KL+++WK    + +E+ +NR LTRCV ELRM
Sbjct: 121 KSNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERNDNRTLTRCVLELRM 180

Query: 181 KGSCFNLSKEPQIGNRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           KGS F+LSKEP  G RMKSSSVEIKW P+TWFS+  ITI LL  + + F  SKFILCGF
Sbjct: 181 KGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAGLFFPVSKFILCGF 236

[Close]

BLAST of CSPI03G04370 vs. TAIR10
Match: AT3G12870.1 (AT3G12870.1 unknown protein)

HSP 1 Score: 110.9 bits (276), Expect = 9.8e-25
Identity = 66/190 (34.74%), Postives = 110/190 (57.89%), Query Frame = 1


Query: 34  HPLRQISESSGHLLLLKLWQRDEHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLT 93
           HPL QI+++  H LLLK W ++E L   R+  +E++++S++++I QL  FFFLFH++SL 
Sbjct: 18  HPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIFFFLFHSISLL 77

Query: 94  LLY-------TSSDPIVCKKWWVPAVLIGATSGVFVIVVQLKLWMYWKARGQLQKEKTEN 153
           LL+       +S+    CK+ W+P++    +S   +  V+ K  +       L++EK + 
Sbjct: 78  LLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKSEVESHLEKLLEREKEDA 137

Query: 154 RALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSVEIKWGPL-TWFSRNFITISLLGFSAM 213
           + L +CV+EL+ KG  F+L KE     R KS  VE K  P+  W +R+F+T+     S +
Sbjct: 138 KLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESK--PVKKWSARDFVTLFFFSVSCL 197

Query: 214 IFVTSKFILC 216
           +    + ILC
Sbjct: 198 VLAMIRLILC 205

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BLAST of CSPI03G04370 vs. NCBI nr
Match: gi|449463707|ref|XP_004149573.1| (PREDICTED: uncharacterized protein LOC101219596 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 4.2e-118
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
           MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60

Query: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGV 120
           LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGV
Sbjct: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120

Query: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
           FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180

Query: 181 EIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           EIKWGPLTWFSRNFITISLLGFSA+IFVTSKFILCGF
Sbjct: 181 EIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCGF 217

[Close]

BLAST of CSPI03G04370 vs. NCBI nr
Match: gi|659096388|ref|XP_008449068.1| (PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo])

HSP 1 Score: 421.4 bits (1082), Expect = 9.6e-115
Identity = 207/217 (95.39%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
           MA+TKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1   MAQTKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60

Query: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVLIGATSGV 120
           LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAV+IGATSGV
Sbjct: 61  LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120

Query: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
           FVIVVQLKLWMYWKARGQLQ+EK+ENRALTRC QELRMKGSCFNLSKEPQIGNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMKSSSV 180

Query: 181 EIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
           EIKWGPLTWFSRNFI ISLLGFSA++F  SKFILCGF
Sbjct: 181 EIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCGF 217

[Close]

BLAST of CSPI03G04370 vs. NCBI nr
Match: gi|470117481|ref|XP_004294886.1| (PREDICTED: uncharacterized protein LOC101294445 [Fragaria vesca subsp. vesca])

HSP 1 Score: 272.3 bits (695), Expect = 7.2e-70
Identity = 137/224 (61.16%), Postives = 174/224 (77.68%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNL-----MISVIQHHPLRQISESSGHLLLLKLWQRD 60
           MAE KD    H+VEIPV++E H Q L     +IS IQHHPL +ISES GHLLLLKLW+R+
Sbjct: 1   MAEMKDCQH-HVVEIPVDEE-HQQKLSSAMTIISAIQHHPLTEISESPGHLLLLKLWRRE 60

Query: 61  EHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS---DPIVCKKWWVPAV 120
           E LFG RI RRET+M+ ++++IFQLCCFF +FHA  LT+L+TSS   +   C+KWW+P++
Sbjct: 61  EDLFGRRIARRETRMDLIRREIFQLCCFFLIFHAFFLTILFTSSVSSEEGTCQKWWIPSI 120

Query: 121 LIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIG 180
           L  +TS VFV++VQ+ LW YWK  GQLQ+EK+ENR L RC+QELRMKG+ F+LSKEPQ G
Sbjct: 121 LSVSTSVVFVVLVQVNLWRYWKVWGQLQREKSENRTLVRCIQELRMKGASFDLSKEPQSG 180

Query: 181 NRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCG 217
            RMKSSSVEIKW P+TW S+N ITI L+ F+ ++F  SK +LCG
Sbjct: 181 KRMKSSSVEIKWKPITWCSQNLITICLVCFAGLVFPASKLMLCG 222

[Close]

BLAST of CSPI03G04370 vs. NCBI nr
Match: gi|595829352|ref|XP_007205859.1| (hypothetical protein PRUPE_ppa011160mg [Prunus persica])

HSP 1 Score: 271.2 bits (692), Expect = 1.6e-69
Identity = 137/225 (60.89%), Postives = 176/225 (78.22%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNL-----MISVIQHHPLRQISESSGHLLLLKLWQRD 60
           MAE KD   AH+VEIPV++E H Q L     +IS IQHHPL +ISES GHLLLLKLW+R+
Sbjct: 1   MAEMKD---AHVVEIPVDEE-HQQKLSSAMTIISAIQHHPLMEISESPGHLLLLKLWRRE 60

Query: 61  EHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS---DPIVCKKWWVPAV 120
           E LFG RI R+E++M+S++++IFQLCCFF +FH   +T+L+TSS   +  +CKKWW+P++
Sbjct: 61  EDLFGRRIARKESRMDSIRREIFQLCCFFLIFHGFFMTILFTSSVNSEEHICKKWWIPSI 120

Query: 121 LIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIG 180
           L  +TS VFV +VQ+ L  YWK   QLQ+EKT+NRALTRC+QELRMKG+ F+LSKEPQ G
Sbjct: 121 LSVSTSFVFVFLVQVNLCRYWKVWNQLQREKTDNRALTRCIQELRMKGASFDLSKEPQSG 180

Query: 181 NRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
            RMKSSSVEIKW P+TW S+  ITI L+ F+ ++F  SKF+LCGF
Sbjct: 181 KRMKSSSVEIKWKPVTWCSQYLITICLVCFAGLVFPVSKFMLCGF 221

[Close]

BLAST of CSPI03G04370 vs. NCBI nr
Match: gi|645216018|ref|XP_008219118.1| (PREDICTED: uncharacterized protein LOC103319361 [Prunus mume])

HSP 1 Score: 266.5 bits (680), Expect = 4.0e-68
Identity = 136/225 (60.44%), Postives = 174/225 (77.33%), Query Frame = 1


Query: 1   MAETKDSTAAHIVEIPVEQENHTQNL-----MISVIQHHPLRQISESSGHLLLLKLWQRD 60
           MAE KDS   H+VEIPV++E H Q L     +IS IQHHPL +ISES GHLLLLKLW+R+
Sbjct: 1   MAEMKDS---HVVEIPVDEE-HQQKLSSAMTIISAIQHHPLMEISESPGHLLLLKLWRRE 60

Query: 61  EHLFGLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSS---DPIVCKKWWVPAV 120
           E LFG  I R+E++M+S+ ++IFQLCCFF +FH   +T+L+TSS   +  +CKKWW+P++
Sbjct: 61  EDLFGRLIARKESRMDSIWREIFQLCCFFLIFHGFFMTILFTSSVNSEEHICKKWWIPSI 120

Query: 121 LIGATSGVFVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIG 180
           L  +TS VFV +VQ+ L  YWK   QLQ+EKT+NRALTRC+QELRMKG+ F+LSKEPQ G
Sbjct: 121 LSVSTSFVFVFLVQVNLCRYWKVWNQLQREKTDNRALTRCIQELRMKGASFDLSKEPQSG 180

Query: 181 NRMKSSSVEIKWGPLTWFSRNFITISLLGFSAMIFVTSKFILCGF 218
            RMKSSSVEIKW P+TW S+  ITI L+ F+ ++F  SKF+LCGF
Sbjct: 181 KRMKSSSVEIKWKPVTWCSQYLITICLVCFAGLVFPVSKFMLCGF 221

The following BLAST results are available for this feature:

BLAST of CSPI03G04370 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G04370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2U7_CUCSA	2.9e-118	99.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G061020 PE=4 SV=1	[more]
M5WCP6_PRUPE	1.1e-69	60.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011160mg PE=4 SV=1	[more]
V4UTR0_9ROSI	1.5e-66	61.16	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009431mg PE=4 SV=1	[more]
A0A067KJC6_JATCU	1.3e-65	57.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09541 PE=4 SV=1	[more]
B9T3X2_RICCO	1.7e-65	59.01	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169980 PE=4 SV=1	[more]

BLAST of CSPI03G04370 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56120.1	1.6e-62	53.14	unknown protein	[more]
AT3G12870.1	9.8e-25	34.74	unknown protein	[more]

BLAST of CSPI03G04370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463707\|ref\|XP_004149573.1\|	4.2e-118	99.08	PREDICTED: uncharacterized protein LOC101219596 [Cucumis sativus]	[more]
gi\|659096388\|ref\|XP_008449068.1\|	9.6e-115	95.39	PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo]	[more]
gi\|470117481\|ref\|XP_004294886.1\|	7.2e-70	61.16	PREDICTED: uncharacterized protein LOC101294445 [Fragaria vesca subsp. vesca]	[more]
gi\|595829352\|ref\|XP_007205859.1\|	1.6e-69	60.89	hypothetical protein PRUPE_ppa011160mg [Prunus persica]	[more]
gi\|645216018\|ref\|XP_008219118.1\|	4.0e-68	60.44	PREDICTED: uncharacterized protein LOC103319361 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G04370.1	CSPI03G04370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 139..159 scor
None	No IPR available	PANTHER	PTHR33287	FAMILY NOT NAMED	coord: 18..216 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G04370	Cla004488	Watermelon (97103) v1	cpiwmB201
CSPI03G04370	Csa3G061020	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G04370	MELO3C014130	Melon (DHL92) v3.5.1	cpimeB240
CSPI03G04370	ClCG10G004550	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G04370	Lsi05G005190	Bottle gourd (USVL1VR-Ls)	cpilsiB197
CSPI03G04370	MELO3C014130.2	Melon (DHL92) v3.6.1	cpimedB225
CSPI03G04370	CsaV3_3G004370	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G04370	Cla97C10G188990	Watermelon (97103) v2	cpiwmbB184
CSPI03G04370	Bhi11G000387	Wax gourd	cpiwgoB218
CSPI03G04370	Cucsa.042280	Cucumber (Gy14) v1	cgycpiB015
CSPI03G04370	CmaCh16G009470	Cucurbita maxima (Rimu)	cmacpiB333
CSPI03G04370	CmoCh16G009850	Cucurbita moschata (Rifu)	cmocpiB324
CSPI03G04370	Cp4.1LG08g08600	Cucurbita pepo (Zucchini)	cpecpiB852
CSPI03G04370	Cp4.1LG14g07650	Cucurbita pepo (Zucchini)	cpecpiB216
CSPI03G04370	CsGy3G004410	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G04370	Carg22344	Silver-seed gourd	carcpiB0620
CSPI03G04370	Carg23555	Silver-seed gourd	carcpiB0008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G04370	Wax gourd	cpiwgoB324
CSPI03G04370	Wild cucumber (PI 183967)	cpicpiB141
CSPI03G04370	Cucurbita maxima (Rimu)	cmacpiB837
CSPI03G04370	Cucurbita maxima (Rimu)	cmacpiB838
CSPI03G04370	Cucurbita moschata (Rifu)	cmocpiB542
CSPI03G04370	Cucurbita moschata (Rifu)	cmocpiB823
CSPI03G04370	Cucurbita pepo (Zucchini)	cpecpiB277
CSPI03G04370	Cucurbita pepo (Zucchini)	cpecpiB870
CSPI03G04370	Bottle gourd (USVL1VR-Ls)	cpilsiB159