CSPI02G08450 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G08450
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCysteine and histidine-rich domain-containing protein RAR1
LocationChr2 : 7957010 .. 7965271 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAAAAGGGTTAGTTTTACAAAACAAAACCTATGCAAAACGAAGAGTGATATTAGGGAGAGAAAAAGAAAATAGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAGACGAGGCCCTACCCAGTACCCACCATCTTCTTCCTTGTCTCTGCGGCACCTCCCCAGTCTTGCCTTCCTTTTCTACAACCCGCACTCTTTGCGTTTTGCTTCAGCCGAACAGCAGCCTCCCATTGCAGGACCTTTTCATCTGCCCACCTGTTCACGTCTCCGGTGGAGTCAAGCGAATCCGGCGAACAACTGCGGTACAGTGACGTCCAATATCGCGACCTGTGTCCTTCACGACCAGTGACCTTTTTGTGACGGGCGACCCTCAATTCTTGGCTTTCCAGAAGCTTTCGTCCTTTTCGGTGAGTTTTGGCGCTTGCCTACTTTAGTTCGGCGTTAGATTTACTTACCCTCTTCTTAAAGGCTCTATGCAGGTTTAAGCGTCAGTGGGTAGACCACTCTAACCTTCTTTTCTAACTAGGTTATGGTCCTTTAGATTTGTCACGATTTGTAAATTAACTCCCAAAGCTCTTATTTGTAAATTCTAAGTAGTTTCAGAAATATTAGCAAGTTTGCATTGGTTTGTTTTCGATAGTAAAGATCTATTGAACTCTTTTGGACACTTTATAAGTGCTGTAAAATTAGTTGACAATTTGGTTGTAATTTGGACTTGATTCCAAGTATTCGTATTGATGACTTTTTGAGAGTTCGAATAAGGTTTTTAACCTTTGAACCATGCTTTTCTTTGTCTTGTTTCTGTTTTTATAATTGCTTTTTCTTTTAAAAAAAAATAATTTCAGGAGACTTTCGATTAATTTAGAAGCGTTTTGGTGAGTGCAATTTTGCTGATTGGGTCTAATATTTTAAAAGCCCTCTTGGGCGTTCGCCTAGGCGCTAGGCACAAGTCTGACACCTTGACTTCTCTTACATAATAAGGCATGCATTAGGCACACGTCCTTGTGAATCCCTAAGTCCCAGAGTCCTGGGCATTGGGAATTTTTCATTTCTTTTTAAAAATTGTTATAATTTGGGGTTTTCCTTTATTAACTAAAAAATAAAATTTAATAAGCCTAATGTGGTACTTTTATATGTTGTGCATCTCAGTCTCACCACTTTTTTTCACCTTGCGCTTGAGTCTCAAGTGACTATTGCGCTTTAAAAAATATTGGTTAGATTTCCTGGCCAGTATGATGTTTGATTTATTCCTATTATGGCTTATTTTTTCTTGAAATTCTGATGTGCTATATGGTTGAACTCACTTAGATGGTTGTCGTGTTGATTCTATAATGTTTAACATGATGAGGTGCTATTATGTGGTTTTGTGAATATAAGCATATTTGTTTTGTTGTGTTGAGAGCACGATATCGTTTTATGTGATTTTTGACATAAAACATGTTATGAAGTGGCATCAAAACTTTGTAGATTCAATTTTAGTCATCGAATTCTCGTCTTCTCATCTTTTTTGAAATTTAATTGGGAAGCTATGGAGCATCAGATTGTTCGGGTTCCCTGCCAGAGAATTGGCTGCAATGCCTTGTTCACTGAGGACGACAATCCCGAAGGTTCCTGTCAATACCATGATTCGGTTTGTTAAATACACTCACATACTCTTTCTCCTATCAACTTCAATAAACTTAGAATTATGGATTGTTGTTCAGTTTGAAATTTATTAACTATCCCAGCTTGGAATTAAGTTCATAATGGAAATCAATGAAGATGGATTAGTTTATTCTCTCTTTAAAAGAAAAAAGTTTGATTACAAGTGTTAAGAAGCTCTCGTGTTGCTTTTGGGAATTTAGTGTTCAAGGCTGGTTTAACATACTTTACTGAAAGATGCTTGCTATCATTAACATTTTTTCATTTAATATTCAGAAAATGTTTTGGACTAGAAAGTTTCCAAATGGTATAGTTAGACTTTATTGAAAGACGGCTGGTGGGGGGCACTGAAGTTCTTCAGTTTTTGTATTTCATTGTTTCCATTTTATCAAGGGCCAAATGAACAAATATTCCTTAAGTGTCCATTCTAGTATAACACATTGGGATGTAACATTGTACTTTTATACTCTCAATAAGTTGAAAATTGTATCACAAGTATACACCTGTTTTTCCTTCACCATTTCCTACTCTCTTGTTTGGCTCCTCTCAACTTGTATTTGGGCAGCCCTTAAACTCTCTGGGTTTTGACTCACACCAAAGGTTGGGTTCGTTATAAATTGCAGTTACAAAGCCATAAGACCTCTCACAATTATGAGCCTGGCTTGGCCTGTGAAGTTAATGCTATGTAGACCTCAACAGTTCCTCAACTAGTTGTTACTGTCAAACCCCAATCTGTCTCAAAATGAAGCCAATAAATGTTGGGTCCATGACAAATTTATGCTCCCAAGCCATTAAAGTTTTTTGGTCATATTCCTTCTTGATAGAGTTGATTTCTAAGTTTAGGCTCTGCAAGTGCTAATAGTTTCTTAACTAATGGACAAACCTCGATCTCTCTCAACTTTAAAGCCATTGGCTATGAAGCATGGGCACTCTTAAAATGGGCAAGTGTTGGTGTTAGACACATGTCGAATGCTGACATGCTCTGACACACCTCGGACACGTGCTTGATACACTAGTTGGCATGTCTGTTATTTTATTTTTAAATTTTTAATGTACGACACGACAGGACGCGACAGGACATGCCTTGACATGGCTAGACATGACAAGCGACACCTCAAGATGCAACAAGCTGCAGTTTTTTAGGAAAAAAATAAAAACATTAAACTTTGTATCCAGTTGAGCGACGGTGAAAGGAGGGGAGCATGGCCACGTTGGTGAGGCGTGGTTGGCGTCAACAACATTGATTTGACTAAGCGATGGCAAAGGGAGGAATCGATGTCGTTGAGAAGAATCAAGGAGGAACTTTGGAAAGGGGGAAAACAAAATGAGGGAGGAGAGATGAGAGGGCTTCGTGGATGTCAAAGAAAATAATAGAGGGAACAGGTTAGGGCTTTTACTCTTAATTGGGCTTTTGGGCTTTTTGACATCCCTTCCGCATTGGATTTTTTAAAAATGGGTTTTGACTTTTCTCTTTTAAATGCACTTTCCTCTTTTATTATTTATTACTTGAAAAAAATATTATTTTAACAATTAATAAAAAAACTAACGCATTTTATGTTTAAATCTTTTGATGTTATACGCATATATATGTACACACATATATGTGTGTGTGTCTGTATTTAGAAAAAACGTGTCCTAATGTGTTCCTCTCCAAAGGGGCAGGTTGTTGGAGAAGTTGAGAGTCCCACATTGAAAAAACCAAGGGGACTCATACTCCATATAAGGTAGATGGGCTACTCCTCACATAGCCAATTGATTTTGAGATGGAACCCCATACTATCAAGTTTAACACAGGTTAACTCTTATGCAATAGTCTTTCTTGTTATTTATTTTCCCTTGCTCAAGCTCCGGTTGGTGTTATAAATAGATTAGAAAAGATGATTAGGAATTTTGTTTGGACATGAGGATCTACTAATTCAGTCTCCCACCTTGTCAAATGGGATTGTACTTCTCGCCCGATCTGTTATGGTGGCCTTGGGATTGGCTCGCTTAGGCAAAAGAACATTGCTCTTCTCACTAAATTGCTTTGGAGGTTTAGTGAGGAACAAAGCCTCTTTATGGAGGCGCTTAATTGTGGCCATCTATAACTTAGAGGGGAGTGGGTGGTCTACTAAAGATCTGAACAAGGGAAGGTATTATAGGTTATTGGCTGGTATTTCGAAGCACAAGGAGACCTTTAAATTCTTGGCTTGTTTGCTGGAAAAAGGAACCAAAATTAGATTTTGGAAGCCAATCGATGTGGTGTGGAACCACTCGCAGGAAAATTTCCCAACTTGTTCTCCTTGTCATTGAACAAGGATGCTTTTGTGGCTGATTGTTGGTGTATTGTTACTCACTTGTGGAACTTGGGCCTTAGAAGAAATGTGCTCGATAAAGAGCTTGACAATGTGGCCTCAATTCTGGAAATTCTTCATTCTTGGCCCCCCTCAGATGGTGGTGATAGTCTTAAATGAAATCCCGCTGCATTGCTATTCCTTTGATTCGTCACATATGGAAGACTAAAATCCCAAAAAATGTGAAATTCTTTTTATGGTCGCTCGCCCATAGAAGTCTTAACACACACGAGAAACTCCAAAAAGAATTCATGCACAAAATGCTCAGCCCCTCGATGTGCTGCCTTTGTTTCAAAGAAGAGGAGACCCCGGACCACTTATTTTTGCATTGTCTCTTTACTAGGAAAGCTTGGAACACTTTGTTTAGAATTTTTTATTTGGAGTTTTGTCTTCCTGGTAAGGTTGATAGTTGGTTGATTGAAGGGCTCAACGTTAGAGGTTATAGCCTGAAAGGAAACATCTTATGGAGATGTGCTATCTGGTCCCTTTTGTGGTGCATTTGGAAAGAAAGGAATGGTAGAATTTTTTAAGATAGCTATAATTCTTTTGATTCTTTTTGGATTGTGTTGCAACACATAGCTTCTTGGTGGAGTACGAATTACACTAAACACTTTTGTAATTATAGCCTTACTATGGTTTTCAACAATTGGAAGGCCATCATTTTTTAGTTTTTTGGGGAGGGCCCTCTTGTCCCTTGCCCTTAGGTTGCTCTCTTTTGTTATATGAATATACATGTTTCTTATCCAAAAAAACAAAAAAAATAACGTGTCCTCGACGTGTCGTGCTCTACAGCTTCAAAATTGGTGCGTTTCATATCTCGTGTCATGTGCCCGTGCTCATGCTTCTTAGACCATTGGTGGTTTCCAAGATGAATTTTGACTATGTTGGGATAAAAGTCACTGGAGGTGCAAACCTGACTTGGCCAAGTCAATCATTGGTGGCCCCTTTACTTCATGAACTTCTACAATTGCCTAATGTCAACTGTGACAAAGATTGAAATATTCATGGATATATCGATATATCCATCAATGTATCCTTAAGTCGGAAGGTTCTACATCGATATTTAGGATTAATTGATATCTCCGATATCTTTTATAAATACACAAAACTCAAAAAAGATTCATCTATTTAATTCCAATATGAATATGAATGCTAATAACAAGATGCATTATGTAGTTTGAAAGCAAAGACAACTTAATTAGTGATTCATATAACTTTATTACTTTTTTTATTATGAGAAATATTTGTTGATAATGATATCGATGTATCCATCTGTAATCCTATGATGACTGCACATTGAGAAAGAATGATTAATTTCCTTATTACTCAATGCTGTGAGATTTCAGCTACAACCTCCAGGGATCCAAAAGTTGGTCAACCATATTGCATACATTTTCCATTTGAGGTTTCTGAAATTGAGCAATCGTAGGCTTTGGGGTGGGCAATTAACTCTGTTGCTCTCCTGTTGCAAATTGTGCTTGAAATACCCTTTTCTTCCTACCAAGCTCATGTTGGTAGTACTTGATGTTGTGTATATGATTGTACTCTTAGTTCAACTAAAAACAAGGGTTTCCCTTGTAATTAGTCTTATGATTATTAACGGTTGGAGGGCTCTTCTTGTTTAGCTGGGAGGGGTTCCCTCTACCCTGCTCTTAGGCTGTTCTTTTGGCTCTACTGGTTAATATTTAACCTTTGTTGCTTATAAAAAAATAATAAAGAACAATTATTTAGTAATAACATGTTTCTTTCCTCAACAAGTTATGTTGTCTTGTTCCTTTGCTGCGTAATGTGTACTTTACTAATTGTCTTTTTCCCTTTACTTGCCATGCGGCCACGGGCTTGGTTGAAATTTGTGGTCTCCATTGTTCCCAGGGAGTAAGTTCACATCGACCTATTGGCTCTCAAGAATATCTTAGTTTGTTTTCATACAAGGATTATGTTTTTCTTTAAATATATATTTGAGAGAAGGTAAGTTGAAATATCTTTTGCAGCCTATATTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGACTTCAGCTTATTTTTAGAGATTCCAGGGTCAGATCTTTTTCATTCTTTTATTTTTAGTTGGAATGCTACACTGTTTCCATGCATAATTGATATGAACTGATGTTTGTTGATTCCATTCCGACACTTTCCTAGAATATACATATTACTTTTGTACAAATAGTAGTTTTTTTCAGGGCAATTCTAAATATGAACCAAGTCTTGGTATCCAGACACTCAAGACTATTTACTCTTATGTTTTAGATGCATCAATTTTGCTACAGATCGTATAATCATTTTTGTACTCAATTTCCGGCTTTGGGTCCTGTCATACCCTGATGTGCAACAGATTCACGTACTTCTTCATTACCCATCATATTCTGAAAGATGGGTGGGTGTGACTTTTTTGTGCTGTCACTTTGCTCCTTGATAATGTTTTTGCCTAAGAATTATTTGATCCTACTACATTTGGCTTCTAAGAAAACTAGTAGGATATTAAATTCTTGGGTAACTTAAACTTGTTCCATCAAAACTATTTGCATTGGCTCGTGTTGACTGTTAAGCCACACACAATGGTTTAATGACATGAATTATTCCCTGTTTGTATGGTTTTTCATTTGGACTCTGGAAGGTTTGTGTTGTTTTCATAATGCTTTTTTGTGACAAGTATGACATGTTCTTCCGCATAGAATACATTCTTGTTTTTCTGATTTTCATTTCTGTAAATCTATCTACAATTTATACAAGTGAGAATACCTTTCATGTTTAAGACTTAGATGGATGGTATTAAAAGCTAAGGTTGGTCTTCGAAAGCCTTTTAAGTTGAATCAAAGTTGTAGTTTTTGTTGACTTTTTTCAATAAAGATGCAAGACCGGAAAACATACAACAGAAAAGCCAGTTTTGACCAAGCCAACCACTGGTGTTAAGAAGCCAAGTCCTCCTTCTTCCATGACAAATACATTAGGGAAAGAGTTATGTGCTAGGTGTCAGCAAGGTTTCTTCTGTTCAGACCATGGTAAGCGCATCTTTTTACTTTTTTTCAATTTGTATCTTGGAGTACCATACCTGGATTTTATGCTATATCTGCAGATGAGTTTGGTATCCTTATTTGGCAATTCTCCTGAATGTTAATATTGCAATTTAATCCAAGTTTGAATCTTAGGTACACAAATTAAAGGCAATAACAAATCTATTAATGAAACCTCAACTATACCTGGTGCAAGCAATACCGATACTCAGGCCCCTCAAAAAAAAAAAAAAATTGGTATGAATGAACCTCAGATCTGCAAGAATAAGGGTTGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCAGTTACCACCCCGGACCTCCTGTTTTTCATGATCGGATGAGAGGGGTGAGATCATTTATTTACTAAACTTAAAATACACCTTTTTTTGTCGTCATGGCATTTGATTATAGATTATCAACTACTGATATTGATACTTTTTATGTTTGATTTAAAGTGGCAATGCTGCAACATTCACGTTAAGGAATTTGACGAGTTCATGGACATTGCTCCCTGCTCTCGTGGTTGGCACAATGCCGGTCCAGCATAACTAAACAACATAGCCATATAAGGTATTTAGGTTCTTGTATTTTAGAAGGATGTGCTAACCCTTTGGAATTCTGTTTCAGTTAATTTTTTCTTATTCGATGAAATCCCTCAATCTAGACAAATTTATATATTGCATATTTCTCCACTCCATCTTCCTTCCAGAATTGATTGAACTACCAGAAGCTTTGCAAAGACAATCTATTTACTTCCGAGATAAATATCATAATAGTTTATATGGTACAGGGTTTACCATGAACTTTTA

mRNA sequence

ATGGAGCATCAGATTGTTCGGGTTCCCTGCCAGAGAATTGGCTGCAATGCCTTGTTCACTGAGGACGACAATCCCGAAGGTTCCTGTCAATACCATGATTCGCCTATATTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGACTTCAGCTTATTTTTAGAGATTCCAGGATGCAAGACCGGAAAACATACAACAGAAAAGCCAGTTTTGACCAAGCCAACCACTGGTGTTAAGAAGCCAAGTCCTCCTTCTTCCATGACAAATACATTAGGGAAAGAGTTATGTGCTAGGTGTCAGCAAGGTTTCTTCTGTTCAGACCATGGTACACAAATTAAAGGCAATAACAAATCTATTAATGAAACCTCAACTATACCTGGTGCAAGCAATACCGATACTCAGGCCCCTCAAAAAAAAAAAAAAATTGGTATGAATGAACCTCAGATCTGCAAGAATAAGGGTTGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCAGTTACCACCCCGGACCTCCTGTTTTTCATGATCGGATGAGAGGGTGGCAATGCTGCAACATTCACGTTAAGGAATTTGACGAGTTCATGGACATTGCTCCCTGCTCTCGTGGTTGGCACAATGCCGGTCCAGCATAA

Coding sequence (CDS)

ATGGAGCATCAGATTGTTCGGGTTCCCTGCCAGAGAATTGGCTGCAATGCCTTGTTCACTGAGGACGACAATCCCGAAGGTTCCTGTCAATACCATGATTCGCCTATATTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGACTTCAGCTTATTTTTAGAGATTCCAGGATGCAAGACCGGAAAACATACAACAGAAAAGCCAGTTTTGACCAAGCCAACCACTGGTGTTAAGAAGCCAAGTCCTCCTTCTTCCATGACAAATACATTAGGGAAAGAGTTATGTGCTAGGTGTCAGCAAGGTTTCTTCTGTTCAGACCATGGTACACAAATTAAAGGCAATAACAAATCTATTAATGAAACCTCAACTATACCTGGTGCAAGCAATACCGATACTCAGGCCCCTCAAAAAAAAAAAAAAATTGGTATGAATGAACCTCAGATCTGCAAGAATAAGGGTTGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCAGTTACCACCCCGGACCTCCTGTTTTTCATGATCGGATGAGAGGGTGGCAATGCTGCAACATTCACGTTAAGGAATTTGACGAGTTCATGGACATTGCTCCCTGCTCTCGTGGTTGGCACAATGCCGGTCCAGCATAA
Homology
[Close]
BLAST of CSPI02G08450 vs. Swiss-Prot
Match: RAR1_ARATH (Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thaliana GN=RAR1 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-81
Identity = 135/217 (62.21%), Postives = 168/217 (77.42%), Query Frame = 1 

Query: 7   RVPCQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKT 66
           ++ CQRIGCNA+FT+DDNP+GSCQ+H S P FHDGMKEWSCCK+RSHDFSLFLEIPGCKT
Sbjct: 9   KLQCQRIGCNAMFTDDDNPQGSCQFHASGPFFHDGMKEWSCCKQRSHDFSLFLEIPGCKT 68

Query: 67  GKHTTEKPVLTKPTTGVKKPSPPSSM-TNTLGKELCARCQQGFFCSDHGTQIKGNNKSIN 126
           GKHTTEKPVL K        +P SS   N   K+ C+RC+QGFFCSDHG+Q K   + I 
Sbjct: 69  GKHTTEKPVLAKSVPKHPVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPK---EQIK 128

Query: 127 ETSTIPGASNTDT----QAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPP 186
           +T   PG +  +       P +K  I +N+PQ+CKNKGCG+TF E +NH+TACS+HPGP 
Sbjct: 129 QTLNTPGQAEEEKIEPLAPPVQKAVIDINQPQVCKNKGCGQTFKERDNHETACSHHPGPA 188

Query: 187 VFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGP 218
           VFHDR+RGW+CC++HVKEFDEFM+I PC++GWH++ P
Sbjct: 189 VFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWHSSSP 222

[Close]
BLAST of CSPI02G08450 vs. Swiss-Prot
Match: RAR1_ORYSJ (Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp. japonica GN=RAR1 PE=1 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 2.9e-79
Identity = 129/211 (61.14%), Postives = 161/211 (76.30%), Query Frame = 1 

Query: 10  CQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKH 69
           CQRIGC+A FT+D+NP+GSCQYH S P+FHDGMK+WSCCK++SHDFSLFL IPGCKTGKH
Sbjct: 26  CQRIGCDATFTDDNNPDGSCQYHPSGPMFHDGMKQWSCCKQKSHDFSLFLAIPGCKTGKH 85

Query: 70  TTEKPVLTKPTTGVKKPSPPSSMTNTLGKELCARCQQGFFCSDHGTQIKGN-NKSINETS 129
           TTEKP+     T   K  P  +   ++G + C+RC+QGFFCSDHG+Q K     + ++T+
Sbjct: 86  TTEKPITKAVPTKPSKAVPVQTSKQSVGADTCSRCRQGFFCSDHGSQPKAQIPTATSDTN 145

Query: 130 TIPGASNTDTQAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPPVFHDRMR 189
            +P         P  KKKI +NEP++CKNKGCGKT+ E +NHD AC YHPGP VF DR+R
Sbjct: 146 MVPVEK---PAVPPPKKKIDLNEPRVCKNKGCGKTYKEKDNHDEACDYHPGPAVFRDRIR 205

Query: 190 GWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 219
           GW+CC+IHVKEFDEFM+I PC++GWHNA  A
Sbjct: 206 GWKCCDIHVKEFDEFMEIPPCTKGWHNADAA 233

[Close]
BLAST of CSPI02G08450 vs. Swiss-Prot
Match: CHRD1_MOUSE (Cysteine and histidine-rich domain-containing protein 1 OS=Mus musculus GN=Chordc1 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-29
Identity = 72/233 (30.90%), Postives = 106/233 (45.49%), Query Frame = 1 

Query: 10  CQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKH 69
           C   GC   F  + N + +C YH   P+FHD +K WSCCK+R+ DFS FL I GC  G+H
Sbjct: 5   CYNRGCGQRFDPEANSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRH 64

Query: 70  TTEKPV----------------------------LTKPTTGVKKPSPPSSMTNTLGKELC 129
            +EKP                               KP   +K+PSP   MTN L  ++ 
Sbjct: 65  NSEKPPEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTN-LELKIS 124

Query: 130 ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG 189
           A  +Q                ++++     G+     +    + KIG +    CKN GC 
Sbjct: 125 ASLKQ----------------ALDKLKLSSGSEEDKKEEDSDEIKIGTS----CKNGGCS 184

Query: 190 KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWH 214
           KT+  +++ +  C YH G P+FH+ M+ W CC     +F+ F+    C+RG H
Sbjct: 185 KTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKH 216

[Close]
BLAST of CSPI02G08450 vs. Swiss-Prot
Match: CHRD1_HUMAN (Cysteine and histidine-rich domain-containing protein 1 OS=Homo sapiens GN=CHORDC1 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-29
Identity = 72/233 (30.90%), Postives = 105/233 (45.06%), Query Frame = 1 

Query: 10  CQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKH 69
           C   GC   F  + N + +C YH   P+FHD +K WSCCK+R+ DFS FL I GC  G+H
Sbjct: 5   CYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRH 64

Query: 70  TTEKPV----------------------------LTKPTTGVKKPSPPSSMTNTLGKELC 129
            +EKP                               KP   +K+PSP   MTN L  ++ 
Sbjct: 65  NSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKPVEAIKRPSPDEPMTN-LELKIS 124

Query: 130 ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG 189
           A  +Q                ++++     G      +    + KIG +    CKN GC 
Sbjct: 125 ASLKQ----------------ALDKLKLSSGNEENKKEEDNDEIKIGTS----CKNGGCS 184

Query: 190 KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWH 214
           KT+  +E+ +  C YH G P+FH+ M+ W CC     +F+ F+    C++G H
Sbjct: 185 KTYQGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKH 216

[Close]
BLAST of CSPI02G08450 vs. Swiss-Prot
Match: CHRD1_RAT (Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus GN=Chordc1 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.2e-29
Identity = 72/233 (30.90%), Postives = 105/233 (45.06%), Query Frame = 1 

Query: 10  CQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKH 69
           C   GC   F  + N + +C YH   P+FHD +K WSCCK+R+ DFS FL I GC  G+H
Sbjct: 5   CYNRGCGQRFDPEANADDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRH 64

Query: 70  TTEKPV----------------------------LTKPTTGVKKPSPPSSMTNTLGKELC 129
            +EKP                               KP   +K+PSP   MTN L  ++ 
Sbjct: 65  NSEKPPEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTN-LELKIS 124

Query: 130 ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG 189
           A  +Q                ++++     G      +    + KIG +    CKN GC 
Sbjct: 125 ASLKQ----------------ALDKLKLSSGNEEDKKEEDSDEIKIGTS----CKNGGCS 184

Query: 190 KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWH 214
           KT+  +++ +  C YH G P+FH+ M+ W CC     +F+ F+    C+RG H
Sbjct: 185 KTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTRGKH 216

[Close]
BLAST of CSPI02G08450 vs. TrEMBL
Match: A0A0A0LKX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G110230 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.2e-106
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 

Query: 41  MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELC 100
           MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELC
Sbjct: 1   MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELC 60

Query: 101 ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG 160
           ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG
Sbjct: 61  ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG 120

Query: 161 KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 219
           KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA
Sbjct: 121 KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 178

[Close]
BLAST of CSPI02G08450 vs. TrEMBL
Match: V4U6X4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005807mg PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.0e-91
Identity = 154/216 (71.30%), Postives = 174/216 (80.56%), Query Frame = 1 

Query: 7   RVPCQRIGCNALFTEDDNPEGSCQYHDSPIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTG 66
           R+ CQRIGCNA FTEDDNPEGSC +HDSPIFHDGMKEWSCCK+RSHDFSLFLEIPGCKTG
Sbjct: 11  RLRCQRIGCNATFTEDDNPEGSCTFHDSPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 70

Query: 67  KHTTEKPVLTKPTTGVKKPSPPSSMTNTLG-----KELCARCQQGFFCSDHGTQIKGNNK 126
           KHTTEKPVLTKP    K P+P  + + TLG     KELC+RC+QGFFCSDHG+Q K   +
Sbjct: 71  KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAK---E 130

Query: 127 SINETSTIPGASNTDTQAP--QKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGP 186
             N    +P  SN   + P    KKKIG+NEPQICKNKGCGKTF E +NH+TACSYHPGP
Sbjct: 131 QTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETACSYHPGP 190

Query: 187 PVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNA 216
            VFHDRMRGW+CC+IHVKEFDEFM I PC++GWH+A
Sbjct: 191 AVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 223

[Close]
BLAST of CSPI02G08450 vs. TrEMBL
Match: A0A067FQA4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027086mg PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 9.8e-90
Identity = 154/217 (70.97%), Postives = 174/217 (80.18%), Query Frame = 1 

Query: 7   RVPCQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKT 66
           R+ CQRIGCNA FTEDDNPEGSC +HDS PIFHDGMKEWSCCK+RSHDFSLFLEIPGCKT
Sbjct: 11  RLRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKT 70

Query: 67  GKHTTEKPVLTKPTTGVKKPSPPSSMTNTLG-----KELCARCQQGFFCSDHGTQIKGNN 126
           GKHTTEKPVLTKP    K P+P  + + TLG     KELC+RC+QGFFCSDHG+Q K   
Sbjct: 71  GKHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAK--- 130

Query: 127 KSINETSTIPGASNTDTQAPQK--KKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPG 186
           +  N    +P  SN   + P    KKKIG+NEPQICKNKGCGKTF E +NH+TACSYHPG
Sbjct: 131 EQTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETACSYHPG 190

Query: 187 PPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNA 216
           P VFHDRMRGW+CC+IHVKEFDEFM I PC++GWH+A
Sbjct: 191 PAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 224

[Close]
BLAST of CSPI02G08450 vs. TrEMBL
Match: V4S837_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005807mg PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 9.8e-90
Identity = 154/217 (70.97%), Postives = 174/217 (80.18%), Query Frame = 1 

Query: 7   RVPCQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKT 66
           R+ CQRIGCNA FTEDDNPEGSC +HDS PIFHDGMKEWSCCK+RSHDFSLFLEIPGCKT
Sbjct: 11  RLRCQRIGCNATFTEDDNPEGSCTFHDSGPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKT 70

Query: 67  GKHTTEKPVLTKPTTGVKKPSPPSSMTNTLG-----KELCARCQQGFFCSDHGTQIKGNN 126
           GKHTTEKPVLTKP    K P+P  + + TLG     KELC+RC+QGFFCSDHG+Q K   
Sbjct: 71  GKHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAK--- 130

Query: 127 KSINETSTIPGASNTDTQAPQK--KKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPG 186
           +  N    +P  SN   + P    KKKIG+NEPQICKNKGCGKTF E +NH+TACSYHPG
Sbjct: 131 EQTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETACSYHPG 190

Query: 187 PPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNA 216
           P VFHDRMRGW+CC+IHVKEFDEFM I PC++GWH+A
Sbjct: 191 PAVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 224

[Close]
BLAST of CSPI02G08450 vs. TrEMBL
Match: Q8LL14_TOBAC (Rar1 OS=Nicotiana tabacum GN=Rar1 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.0e-87
Identity = 152/219 (69.41%), Postives = 173/219 (79.00%), Query Frame = 1 

Query: 7   RVPCQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKT 66
           R+ CQRIGCNA FTEDDNPE SC YH+S P+FHDGMK+WSCCKK SHDFSLFLEIPGCK 
Sbjct: 3   RLRCQRIGCNATFTEDDNPENSCTYHESGPLFHDGMKKWSCCKKSSHDFSLFLEIPGCKI 62

Query: 67  GKHTTEKPVLTKPTTGVKKPSP-PSSMTNTLGKELCARCQQGFFCSDHGTQIKGN-NKSI 126
           GKHTTEKPV+  P     +  P P+S TN   KE C RC+QGFFCSDHG+Q +    K+ 
Sbjct: 63  GKHTTEKPVIANPAANRNRAIPAPTSTTNVSPKEACPRCRQGFFCSDHGSQPREVIPKAS 122

Query: 127 NETSTIPGASNTDTQ----APQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGP 186
           N  +++P  SNTD Q    AP KKK + +NEPQICKNKGCGKTFTE ENHDTACSYHPGP
Sbjct: 123 NTVTSVPSESNTDIQQCHPAPVKKK-VDINEPQICKNKGCGKTFTEKENHDTACSYHPGP 182

Query: 187 PVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 219
            +FHDRMRGW+CC+IHVKEFDEFM I+PC+ GWHNA PA
Sbjct: 183 AIFHDRMRGWKCCDIHVKEFDEFMSISPCTTGWHNASPA 220

[Close]
BLAST of CSPI02G08450 vs. TAIR10
Match: AT5G51700.1 (AT5G51700.1 protein binding;zinc ion binding)

HSP 1 Score: 304.3 bits (778), Expect = 6.1e-83
Identity = 135/217 (62.21%), Postives = 168/217 (77.42%), Query Frame = 1 

Query: 7   RVPCQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKT 66
           ++ CQRIGCNA+FT+DDNP+GSCQ+H S P FHDGMKEWSCCK+RSHDFSLFLEIPGCKT
Sbjct: 9   KLQCQRIGCNAMFTDDDNPQGSCQFHASGPFFHDGMKEWSCCKQRSHDFSLFLEIPGCKT 68

Query: 67  GKHTTEKPVLTKPTTGVKKPSPPSSM-TNTLGKELCARCQQGFFCSDHGTQIKGNNKSIN 126
           GKHTTEKPVL K        +P SS   N   K+ C+RC+QGFFCSDHG+Q K   + I 
Sbjct: 69  GKHTTEKPVLAKSVPKHPVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPK---EQIK 128

Query: 127 ETSTIPGASNTDT----QAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPP 186
           +T   PG +  +       P +K  I +N+PQ+CKNKGCG+TF E +NH+TACS+HPGP 
Sbjct: 129 QTLNTPGQAEEEKIEPLAPPVQKAVIDINQPQVCKNKGCGQTFKERDNHETACSHHPGPA 188

Query: 187 VFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGP 218
           VFHDR+RGW+CC++HVKEFDEFM+I PC++GWH++ P
Sbjct: 189 VFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWHSSSP 222

[Close]
BLAST of CSPI02G08450 vs. NCBI nr
Match: gi|778668194|ref|XP_011649053.1| (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 1.2e-133
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MEHQIVRVPCQRIGCNALFTEDDNPEGSCQYHDSPIFHDGMKEWSCCKKRSHDFSLFLEI 60
           MEHQIVRVPCQRIGCNALFTEDDNPEGSCQYHDSPIFHDGMKEWSCCKKRSHDFSLFLEI
Sbjct: 1   MEHQIVRVPCQRIGCNALFTEDDNPEGSCQYHDSPIFHDGMKEWSCCKKRSHDFSLFLEI 60

Query: 61  PGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELCARCQQGFFCSDHGTQIKGNN 120
           PGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELCARCQQGFFCSDHGTQIKGNN
Sbjct: 61  PGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELCARCQQGFFCSDHGTQIKGNN 120

Query: 121 KSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPP 180
           KSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPP
Sbjct: 121 KSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPP 180

Query: 181 VFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 219
           VFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA
Sbjct: 181 VFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 218

[Close]
BLAST of CSPI02G08450 vs. NCBI nr
Match: gi|449442307|ref|XP_004138923.1| (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 3.0e-132
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 1 

Query: 1   MEHQIVRVPCQRIGCNALFTEDDNPEGSCQYHDS-PIFHDGMKEWSCCKKRSHDFSLFLE 60
           MEHQIVRVPCQRIGCNALFTEDDNPEGSCQYHDS PIFHDGMKEWSCCKKRSHDFSLFLE
Sbjct: 1   MEHQIVRVPCQRIGCNALFTEDDNPEGSCQYHDSGPIFHDGMKEWSCCKKRSHDFSLFLE 60

Query: 61  IPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELCARCQQGFFCSDHGTQIKGN 120
           IPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELCARCQQGFFCSDHGTQIKGN
Sbjct: 61  IPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELCARCQQGFFCSDHGTQIKGN 120

Query: 121 NKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGP 180
           NKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGP
Sbjct: 121 NKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGP 180

Query: 181 PVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 219
           PVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA
Sbjct: 181 PVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 219

[Close]
BLAST of CSPI02G08450 vs. NCBI nr
Match: gi|778668197|ref|XP_011649054.1| (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X3 [Cucumis sativus])

HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 

Query: 41  MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELC 100
           MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELC
Sbjct: 1   MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPSPPSSMTNTLGKELC 60

Query: 101 ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG 160
           ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG
Sbjct: 61  ARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAPQKKKKIGMNEPQICKNKGCG 120

Query: 161 KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 219
           KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA
Sbjct: 121 KTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 178

[Close]
BLAST of CSPI02G08450 vs. NCBI nr
Match: gi|659082603|ref|XP_008441929.1| (PREDICTED: LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1, partial [Cucumis melo])

HSP 1 Score: 373.6 bits (958), Expect = 2.3e-100
Identity = 174/194 (89.69%), Postives = 180/194 (92.78%), Query Frame = 1 

Query: 29  CQYHDS--PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPS 88
           C  H S  PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTT VKK S
Sbjct: 39  CGLHCSQGPIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTAVKKLS 98

Query: 89  PP-SSMTNTLGKELCARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQAP-QKKK 148
           PP SSMTNTLGKE CARCQQGFFCSDHGTQIKG NKSINETSTIPGASNTDTQ P Q+KK
Sbjct: 99  PPLSSMTNTLGKESCARCQQGFFCSDHGTQIKGTNKSINETSTIPGASNTDTQXPLQQKK 158

Query: 149 KIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMD 208
           +IG+NEPQICKNKGCGKTFTEMENH+TACSYHPGPPVFHDR+RGWQCCNIHVKEFDEFM+
Sbjct: 159 RIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFME 218

Query: 209 IAPCSRGWHNAGPA 219
           I PCSRGWHNA PA
Sbjct: 219 IPPCSRGWHNADPA 232

[Close]
BLAST of CSPI02G08450 vs. NCBI nr
Match: gi|567858172|ref|XP_006421769.1| (hypothetical protein CICLE_v10005807mg [Citrus clementina])

HSP 1 Score: 342.4 bits (877), Expect = 5.7e-91
Identity = 154/216 (71.30%), Postives = 174/216 (80.56%), Query Frame = 1 

Query: 7   RVPCQRIGCNALFTEDDNPEGSCQYHDSPIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTG 66
           R+ CQRIGCNA FTEDDNPEGSC +HDSPIFHDGMKEWSCCK+RSHDFSLFLEIPGCKTG
Sbjct: 11  RLRCQRIGCNATFTEDDNPEGSCTFHDSPIFHDGMKEWSCCKRRSHDFSLFLEIPGCKTG 70

Query: 67  KHTTEKPVLTKPTTGVKKPSPPSSMTNTLG-----KELCARCQQGFFCSDHGTQIKGNNK 126
           KHTTEKPVLTKP    K P+P  + + TLG     KELC+RC+QGFFCSDHG+Q K   +
Sbjct: 71  KHTTEKPVLTKPVATSKTPAPAPAPSTTLGSSTPSKELCSRCRQGFFCSDHGSQAK---E 130

Query: 127 SINETSTIPGASNTDTQAP--QKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGP 186
             N    +P  SN   + P    KKKIG+NEPQICKNKGCGKTF E +NH+TACSYHPGP
Sbjct: 131 QTNYAPAVPAGSNVAAEVPPVPVKKKIGINEPQICKNKGCGKTFKEKDNHETACSYHPGP 190

Query: 187 PVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNA 216
            VFHDRMRGW+CC+IHVKEFDEFM I PC++GWH+A
Sbjct: 191 AVFHDRMRGWKCCDIHVKEFDEFMGIPPCTKGWHDA 223

The following BLAST results are available for this feature:
BLAST of CSPI02G08450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAR1_ARATH1.1e-8162.21Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thalia... [more]
RAR1_ORYSJ2.9e-7961.14Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp... [more]
CHRD1_MOUSE2.8e-2930.90Cysteine and histidine-rich domain-containing protein 1 OS=Mus musculus GN=Chord... [more]
CHRD1_HUMAN3.6e-2930.90Cysteine and histidine-rich domain-containing protein 1 OS=Homo sapiens GN=CHORD... [more]
CHRD1_RAT6.2e-2930.90Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus GN=... [more]
BLAST of CSPI02G08450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKX0_CUCSA1.2e-106100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G110230 PE=4 SV=1[more]
V4U6X4_9ROSI4.0e-9171.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005807mg PE=4 SV=1[more]
A0A067FQA4_CITSI9.8e-9070.97Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027086mg PE=4 SV=1[more]
V4S837_9ROSI9.8e-9070.97Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005807mg PE=4 SV=1[more]
Q8LL14_TOBAC2.0e-8769.41Rar1 OS=Nicotiana tabacum GN=Rar1 PE=2 SV=1[more]
BLAST of CSPI02G08450 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51700.16.1e-8362.21 protein binding;zinc ion binding[more]
BLAST of CSPI02G08450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778668194|ref|XP_011649053.1|1.2e-133100.00PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X2... [more]
gi|449442307|ref|XP_004138923.1|3.0e-13299.54PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1... [more]
gi|778668197|ref|XP_011649054.1|1.7e-106100.00PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X3... [more]
gi|659082603|ref|XP_008441929.1|2.3e-10089.69PREDICTED: LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing pr... [more]
gi|567858172|ref|XP_006421769.1|5.7e-9171.30hypothetical protein CICLE_v10005807mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007051CHORD_dom
IPR007051CHORD_dom
IPR007051CHORD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0042742 defense response to bacterium
biological_process GO:0044699 single-organism process
biological_process GO:0098542 defense response to other organism
cellular_component GO:0005575 cellular_component
cellular_component GO:0044424 intracellular part
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G08450.4CSPI02G08450.4mRNA
CSPI02G08450.3CSPI02G08450.3mRNA
CSPI02G08450.2CSPI02G08450.2mRNA
CSPI02G08450.1CSPI02G08450.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G08450Cla001633Watermelon (97103) v1cpiwmB168
CSPI02G08450Csa2G110230Cucumber (Chinese Long) v2cpicuB065
CSPI02G08450MELO3C008527Melon (DHL92) v3.5.1cpimeB142
CSPI02G08450Lsi11G009890Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G08450MELO3C008527.2Melon (DHL92) v3.6.1cpimedB135
CSPI02G08450CsaV3_2G010830Cucumber (Chinese Long) v3cpicucB080
CSPI02G08450Cucsa.265730Cucumber (Gy14) v1cgycpiB403
CSPI02G08450CsGy2G008760Cucumber (Gy14) v2cgybcpiB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G08450Wax gourdcpiwgoB140
CSPI02G08450Cucurbita maxima (Rimu)cmacpiB802
CSPI02G08450Cucurbita moschata (Rifu)cmocpiB784
CSPI02G08450Cucurbita pepo (Zucchini)cpecpiB103