MELO3C008527.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008527.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionCysteine and histidine-rich domain-containing protein RAR1
Locationchr05 : 11888281 .. 11890332 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTACTCTTGTTTTTTAGATTCATCAATTTTTCTATAGATCGTGTAACCATTTTATTACTCCATTTCCGGCTTTGAGTCCTCATCCTCTGATGTGCAACAGATTCACGTACTTGCTTCGTTACCCCTCACATTCTGATGGGTGGGTGTGACTTTTTTGTGCTGTCACTTTGCTCCTTGATAATATATTCGCCTGAAAATTATCTGATCCTACTACATTTGGCTTCTAAAAAAACTAGTAGGATATTAAGTTCTTGGATAACTTAAACTCATTCCATCAAATCCCTTTACTATTTGCTTTGGCCCATGTTGACCGTTAAGCCGCACACAATGGTTTAATGATATGAATTATTGGTCTTCATTCCTTGTTTATATGGTTTTTCATTTGGACTTTGGAAGATATGTGTTGTATTCATACTGCATTTTTGTGACAAGTATGACGTGTTCTTCTGCATAGAATATGTTTTTGTTTCGCTGATCTTTCATTTCTGTAAATCTGTCTACAATTTATACAAGTGAGCATACCTTTCATGTTTAAGACTTAGATGGATGGTATTAAAAGTTAAGGTTGGTCTTCGAAAGCCTTTTAAGTTGAATCAAAGTTGTAGTTTTTGTTCACTTTTTTGAATAAAGATGCAAGACCGGAAAACATACAACTGAAAAGCCAGTTTTGACCAAGCCAACCACTGCTGTTAAGAAGTTAAGTCCTCCTTTGTCTTCCATGACAAATACATTAGGGAAAGAGTCATGTGCTAGGTGTCAGCAAGGTTTCTTCTGTTCAGACCATGGTAAGCGCATCTTTTTACTTTCTTTCAATTTGTATCGGAGTACGGTACCTTGATTTTATGCTATATTTGCTGATGAGTTTGGTATCCTCATCTGGCAACTCTCCTGAATGTTAATATTGTAATTTAATCCAAGTTTGAATCTTAGGTACACAAATTAAAGGCACTAACAAATCTATTAATGAAACCTCAACTATACCCGGTGCAAGCAATACTGATACTCAGGCCCCTCCAACAAAAAAAAAGAGAAAGAATTGGTATTAATGAACCTCAGATCTGCAAGAATAAGGGGTGTGGTAAAACTTTCACAGAGATGGAGAATCATGAAACTGCCTGCAGTTACCACCCCGGACCTCCTGTTTTTCATGATCGGTTGAGAGGGGTGAGATCATATATTTACTAAACTTTAAAAACACCTTTTTTTTTTTTTGTCGTCATGGCGTTCAATTATAGATTTATCAACTACCGATATTGATGCTTTCTATGTTTGATTTAAAGTGGCAATGCTGCAACATTCACGTTAAGGAATTTGACGAGTTCATGGAAATTCCTCCCTGCTCTCGTGGTTGGCACAATGCCGATCCAGCATAACTAAACAACATAGCCATATAAGGTATTGAGGTTCTTGCATTTTAGAAGAATGCACTAACCCTTTGGAATTCTGTTTCAGTTGGTTTTTTCTTTCTTATTCGATGAAATCTCTCAATCTAGACAAATTTATATATTGCATATTTCTCCACTCCATCTTCCTTCCAGAATTGATTGAACTACCAGAAGCTTTGCAAAGATAATCTATTTACTTCCGAGATAAATATCATAATAATTTATATGGTACAGGGTTTACCATGAACTTTTATTGGACTTGTTTTGTAGTACAACCTTGTGTTTCTATGAAGATATTGGAAGGTGGACTGGTTGGTCGTATCTGATTCCGGCATTCATTTCCTTATGGCTTATAAATAGGAGAAACAACTGTGGAGATCTAGTTAACTTCATCAGCATATATACTAAATGAATGAAGCTTCAGTATGGTTATGATAACTTCAATGTTGTATATTTTTTATCCTGCGATATAACATTATTAATCTTTTGAAACTATGTCCTCGACATGTTCTTCCCTATAGATGCTTATCTTGTGGCCGCAATGATTGGCATCCCCCTTATAGTTAAATTCTCCTTACATCTGATGGCAAACTAGAGCCATATTGTTGCCCCCAGCAGTTTGATTGAATGGTATATGTATTCATTTCATCTAATCACACAAAAT

mRNA sequence

AATTTACTCTTGTTTTTTAGATTCATCAATTTTTCTATAGATCGTGTAACCATTTTATTACTCCATTTCCGGCTTTGAGTCCTCATCCTCTGATGTGCAACAGATTCACGTACTTGCTTCGTTACCCCTCACATTCTGATGGGTGGGTGTGACTTTTTTGTGCTGTCACTTTGCTCCTTGATAATATATTCGCCTGAAAATTATCTGATCCTACTACATTTGGCTTCTAAAAAAACTAGTAGGATATTAAGTTCTTGGATAACTTAAACTCATTCCATCAAATCCCTTTACTATTTGCTTTGGCCCATGTTGACCGTTAAGCCGCACACAATGGTTTAATGATATGAATTATTGGTCTTCATTCCTTGTTTATATGGTTTTTCATTTGGACTTTGGAAGATATGTGTTGTATTCATACTGCATTTTTGTGACAAGTATGACGTGTTCTTCTGCATAGAATATGTTTTTGTTTCGCTGATCTTTCATTTCTGTAAATCTGTCTACAATTTATACAAGTGAGCATACCTTTCATGTTTAAGACTTAGATGGATGGTATTAAAAGTTAAGGTTGGTCTTCGAAAGCCTTTTAAGTTGAATCAAAGTTGTAGTTTTTGTTCACTTTTTTGAATAAAGATGCAAGACCGGAAAACATACAACTGAAAAGCCAGTTTTGACCAAGCCAACCACTGCTGTTAAGAAGTTAAGTCCTCCTTTGTCTTCCATGACAAATACATTAGGGAAAGAGTCATGTGCTAGGTGTCAGCAAGGTTTCTTCTGTTCAGACCATGGTAAGCGCATCTTTTTACTTTCTTTCAATTTGTATCGGAGTACGGTACCTTGATTTTATGCTATATTTGCTGATGAGTTTGGTATCCTCATCTGGCAACTCTCCTGAATGTTAATATTGTAATTTAATCCAAGTTTGAATCTTAGGTACACAAATTAAAGGCACTAACAAATCTATTAATGAAACCTCAACTATACCCGGTGCAAGCAATACTGATACTCAGGCCCCTCCAACAAAAAAAAAGAGAAAGAATTGGTATTAATGAACCTCAGATCTGCAAGAATAAGGGGTGTGGTAAAACTTTCACAGAGATGGAGAATCATGAAACTGCCTGCAGTTACCACCCCGGACCTCCTGTTTTTCATGATCGGTTGAGAGGGTGGCAATGCTGCAACATTCACGTTAAGGAATTTGACGAGTTCATGGAAATTCCTCCCTGCTCTCGTGGTTGGCACAATGCCGATCCAGCATAACTAAACAACATAGCCATATAAGTACAACCTTGTGTTTCTATGAAGATATTGGAAGGTGGACTGGTTGGTCGTATCTGATTCCGGCATTCATTTCCTTATGGCTTATAAATAGGAGAAACAACTGTGGAGATCTAGTTAACTTCATCAGCATATATACTAAATGAATGAAGCTTCAGTATGGTTATGATAACTTCAATGTTGTATATTTTTTATCCTGCGATATAACATTATTAATCTTTTGAAACTATGTCCTCGACATGTTCTTCCCTATAGATGCTTATCTTGTGGCCGCAATGATTGGCATCCCCCTTATAGTTAAATTCTCCTTACATCTGATGGCAAACTAGAGCCATATTGTTGCCCCCAGCAGTTTGATTGAATGGTATATGTATTCATTTCATCTAATCACACAAAAT

Coding sequence (CDS)

ATGAAACCTCAACTATACCCGGTGCAAGCAATACTGATACTCAGGCCCCTCCAACAAAAAAAAAGAGAAAGAATTGGTATTAATGAACCTCAGATCTGCAAGAATAAGGGGTGTGGTAAAACTTTCACAGAGATGGAGAATCATGAAACTGCCTGCAGTTACCACCCCGGACCTCCTGTTTTTCATGATCGGTTGAGAGGGTGGCAATGCTGCAACATTCACGTTAAGGAATTTGACGAGTTCATGGAAATTCCTCCCTGCTCTCGTGGTTGGCACAATGCCGATCCAGCATAA

Protein sequence

MKPQLYPVQAILILRPLQQKKRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEIPPCSRGWHNADPA
Homology
[Close]
BLAST of MELO3C008527.2 vs. NCBI nr
Match: XP_008441929.2 (PREDICTED: LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1, partial [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 5.5e-42
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 21  KRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDE 80
           +++RIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDE
Sbjct: 156 QKKRIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDE 215

Query: 81  FMEIPPCSRGWHNADPA 98
           FMEIPPCSRGWHNADPA
Sbjct: 216 FMEIPPCSRGWHNADPA 232

[Close]
BLAST of MELO3C008527.2 vs. NCBI nr
Match: XP_004138923.1 (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucumis sativus] >XP_011649051.1 PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucumis sativus] >XP_011649052.1 PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 4.4e-39
Identity = 68/78 (87.18%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 20  KKRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFD 79
           +K+++IG+NEPQICKNKGCGKTFTEMENH+TACSYHPGPPVFHDR+RGWQCCNIHVKEFD
Sbjct: 142 QKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFD 201

Query: 80  EFMEIPPCSRGWHNADPA 98
           EFM+I PCSRGWHNA PA
Sbjct: 202 EFMDIAPCSRGWHNAGPA 219

[Close]
BLAST of MELO3C008527.2 vs. NCBI nr
Match: XP_011649054.1 (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X3 [Cucumis sativus] >KGN61397.1 hypothetical protein Csa_2G110230 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 4.4e-39
Identity = 68/78 (87.18%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 20  KKRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFD 79
           +K+++IG+NEPQICKNKGCGKTFTEMENH+TACSYHPGPPVFHDR+RGWQCCNIHVKEFD
Sbjct: 101 QKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFD 160

Query: 80  EFMEIPPCSRGWHNADPA 98
           EFM+I PCSRGWHNA PA
Sbjct: 161 EFMDIAPCSRGWHNAGPA 178

[Close]
BLAST of MELO3C008527.2 vs. NCBI nr
Match: XP_011649053.1 (PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 4.4e-39
Identity = 68/78 (87.18%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 20  KKRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFD 79
           +K+++IG+NEPQICKNKGCGKTFTEMENH+TACSYHPGPPVFHDR+RGWQCCNIHVKEFD
Sbjct: 141 QKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFD 200

Query: 80  EFMEIPPCSRGWHNADPA 98
           EFM+I PCSRGWHNA PA
Sbjct: 201 EFMDIAPCSRGWHNAGPA 218

[Close]
BLAST of MELO3C008527.2 vs. NCBI nr
Match: XP_022159695.1 (cysteine and histidine-rich domain-containing protein RAR1 [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 66/73 (90.41%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 25  IGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEI 84
           IGINEPQICKNKGCGKTFTEMENH+TAC++HPGPPVFHDRLRGW+CC+IHVKEFDEFMEI
Sbjct: 151 IGINEPQICKNKGCGKTFTEMENHDTACNFHPGPPVFHDRLRGWKCCDIHVKEFDEFMEI 210

Query: 85  PPCSRGWHNADPA 98
            PC+RGWHNADPA
Sbjct: 211 QPCTRGWHNADPA 223

[Close]
BLAST of MELO3C008527.2 vs. TAIR10
Match: AT5G51700.1 (protein binding;zinc ion binding)

HSP 1 Score: 146.4 bits (368), Expect = 9.4e-36
Identity = 55/72 (76.39%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 25  IGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEI 84
           I IN+PQ+CKNKGCG+TF E +NHETACS+HPGP VFHDRLRGW+CC++HVKEFDEFMEI
Sbjct: 151 IDINQPQVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEI 210

Query: 85  PPCSRGWHNADP 97
           PPC++GWH++ P
Sbjct: 211 PPCTKGWHSSSP 222

[Close]
BLAST of MELO3C008527.2 vs. Swiss-Prot
Match: sp|Q9SE33|RAR1_ARATH (Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thaliana OX=3702 GN=RAR1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-34
Identity = 55/72 (76.39%), Postives = 67/72 (93.06%), Query Frame = 0 

Query: 25  IGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEI 84
           I IN+PQ+CKNKGCG+TF E +NHETACS+HPGP VFHDRLRGW+CC++HVKEFDEFMEI
Sbjct: 151 IDINQPQVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEI 210

Query: 85  PPCSRGWHNADP 97
           PPC++GWH++ P
Sbjct: 211 PPCTKGWHSSSP 222

[Close]
BLAST of MELO3C008527.2 vs. Swiss-Prot
Match: sp|Q6EPW7|RAR1_ORYSJ (Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAR1 PE=1 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-34
Identity = 55/83 (66.27%), Postives = 70/83 (84.34%), Query Frame = 0 

Query: 15  RPLQQKKRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIH 74
           +P     +++I +NEP++CKNKGCGKT+ E +NH+ AC YHPGP VF DR+RGW+CC+IH
Sbjct: 151 KPAVPPPKKKIDLNEPRVCKNKGCGKTYKEKDNHDEACDYHPGPAVFRDRIRGWKCCDIH 210

Query: 75  VKEFDEFMEIPPCSRGWHNADPA 98
           VKEFDEFMEIPPC++GWHNAD A
Sbjct: 211 VKEFDEFMEIPPCTKGWHNADAA 233

[Close]
BLAST of MELO3C008527.2 vs. Swiss-Prot
Match: sp|A9YUB1|CHRD1_PIG (Cysteine and histidine-rich domain-containing protein 1 OS=Sus scrofa OX=9823 GN=CHORDC1 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.7e-16
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 32 ICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEIPPCSRGW 91
          +C N+GCG+ F    N + AC+YHPG PVFHD L+GW CC     +F +F+ I  C++G 
Sbjct: 4  LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGR 63

Query: 92 HNAD 96
          HN++
Sbjct: 64 HNSE 67

[Close]
BLAST of MELO3C008527.2 vs. Swiss-Prot
Match: sp|Q29RL2|CHRD1_BOVIN (Cysteine and histidine-rich domain-containing protein 1 OS=Bos taurus OX=9913 GN=CHORDC1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-16
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 32 ICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEIPPCSRGW 91
          +C N+GCG+ F    N + AC+YHPG PVFHD L+GW CC     +F +F+ I  C++G 
Sbjct: 4  LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63

Query: 92 HNAD 96
          HN++
Sbjct: 64 HNSE 67

[Close]
BLAST of MELO3C008527.2 vs. Swiss-Prot
Match: sp|Q5ZML4|CHRD1_CHICK (Cysteine and histidine-rich domain-containing protein 1 OS=Gallus gallus OX=9031 GN=CHORDC1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-16
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0 

Query: 32 ICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEIPPCSRGW 91
          +C N+GCG+ F    N E +C+YHPG PVFHD L+GW CC     +F +F+ I  C++G 
Sbjct: 4  LCYNRGCGQRFDPETNTEDSCTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGL 63

Query: 92 HNAD 96
          HN++
Sbjct: 64 HNSE 67

[Close]
BLAST of MELO3C008527.2 vs. TrEMBL
Match: tr|A0A1S3B5A5|A0A1S3B5A5_CUCME (LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1 OS=Cucumis melo OX=3656 GN=LOC103485924 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-42
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 21  KRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDE 80
           +++RIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDE
Sbjct: 156 QKKRIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDE 215

Query: 81  FMEIPPCSRGWHNADPA 98
           FMEIPPCSRGWHNADPA
Sbjct: 216 FMEIPPCSRGWHNADPA 232

[Close]
BLAST of MELO3C008527.2 vs. TrEMBL
Match: tr|A0A0A0LKX0|A0A0A0LKX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110230 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-39
Identity = 68/78 (87.18%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 20  KKRERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFD 79
           +K+++IG+NEPQICKNKGCGKTFTEMENH+TACSYHPGPPVFHDR+RGWQCCNIHVKEFD
Sbjct: 101 QKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFD 160

Query: 80  EFMEIPPCSRGWHNADPA 98
           EFM+I PCSRGWHNA PA
Sbjct: 161 EFMDIAPCSRGWHNAGPA 178

[Close]
BLAST of MELO3C008527.2 vs. TrEMBL
Match: tr|A0A2G3BAB3|A0A2G3BAB3_CAPCH (Cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum chinense OX=80379 GN=BC332_28633 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 22  RERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEF 81
           ++++ INEPQICKNKGCGKTF E ENH+TACSYHPGP VFHDR+RGW+CC+IHVKEFDEF
Sbjct: 146 KKKVDINEPQICKNKGCGKTFKEKENHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEF 205

Query: 82  MEIPPCSRGWHNADP 97
           M IPPCS+GWHNADP
Sbjct: 206 MSIPPCSKGWHNADP 220

[Close]
BLAST of MELO3C008527.2 vs. TrEMBL
Match: tr|A0A2G2YGM0|A0A2G2YGM0_CAPAN (Cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum annuum OX=4072 GN=T459_28383 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 22  RERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEF 81
           ++++ INEPQICKNKGCGKTF E ENH+TACSYHPGP VFHDR+RGW+CC+IHVKEFDEF
Sbjct: 146 KKKVDINEPQICKNKGCGKTFKEKENHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEF 205

Query: 82  MEIPPCSRGWHNADP 97
           M IPPCS+GWHNADP
Sbjct: 206 MSIPPCSKGWHNADP 220

[Close]
BLAST of MELO3C008527.2 vs. TrEMBL
Match: tr|A0A1U8ENL8|A0A1U8ENL8_CAPAN (cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum annuum OX=4072 GN=LOC107847903 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35
Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0 

Query: 22  RERIGINEPQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEF 81
           ++++ INEPQICKNKGCGKTF E ENH+TACSYHPGP VFHDR+RGW+CC+IHVKEFDEF
Sbjct: 147 KKKVDINEPQICKNKGCGKTFKEKENHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEF 206

Query: 82  MEIPPCSRGWHNADP 97
           M IPPCS+GWHNADP
Sbjct: 207 MSIPPCSKGWHNADP 221

The following BLAST results are available for this feature:
BLAST of MELO3C008527.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008441929.25.5e-4296.10PREDICTED: LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing pr... [more]
XP_004138923.14.4e-3987.18PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X1... [more]
XP_011649054.14.4e-3987.18PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X3... [more]
XP_011649053.14.4e-3987.18PREDICTED: cysteine and histidine-rich domain-containing protein RAR1 isoform X2... [more]
XP_022159695.11.8e-3790.41cysteine and histidine-rich domain-containing protein RAR1 [Momordica charantia][more]
BLAST of MELO3C008527.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51700.19.4e-3676.39protein binding;zinc ion binding[more]
BLAST of MELO3C008527.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SE33|RAR1_ARATH1.7e-3476.39Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thalia... [more]
sp|Q6EPW7|RAR1_ORYSJ3.8e-3466.27Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp... [more]
sp|A9YUB1|CHRD1_PIG2.7e-1646.88Cysteine and histidine-rich domain-containing protein 1 OS=Sus scrofa OX=9823 GN... [more]
sp|Q29RL2|CHRD1_BOVIN3.6e-1646.88Cysteine and histidine-rich domain-containing protein 1 OS=Bos taurus OX=9913 GN... [more]
sp|Q5ZML4|CHRD1_CHICK3.6e-1646.88Cysteine and histidine-rich domain-containing protein 1 OS=Gallus gallus OX=9031... [more]
BLAST of MELO3C008527.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B5A5|A0A1S3B5A5_CUCME3.7e-4296.10LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1 ... [more]
tr|A0A0A0LKX0|A0A0A0LKX0_CUCSA2.9e-3987.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110230 PE=4 SV=1[more]
tr|A0A2G3BAB3|A0A2G3BAB3_CAPCH1.9e-3581.33Cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum chinense ... [more]
tr|A0A2G2YGM0|A0A2G2YGM0_CAPAN1.9e-3581.33Cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum annuum OX... [more]
tr|A0A1U8ENL8|A0A1U8ENL8_CAPAN1.9e-3581.33cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum annuum OX... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007051CHORD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0044699 single-organism process
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0009817 defense response to fungus, incompatible interaction
biological_process GO:0002376 immune system process
biological_process GO:0045087 innate immune response
biological_process GO:0009626 plant-type hypersensitive response
biological_process GO:0050821 protein stabilization
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0042742 defense response to bacterium
biological_process GO:0008150 biological_process
biological_process GO:0098542 defense response to other organism
biological_process GO:0009814 defense response, incompatible interaction
cellular_component GO:0005575 cellular_component
cellular_component GO:0044424 intracellular part
molecular_function GO:0051879 Hsp90 protein binding
molecular_function GO:0005488 binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008527.2.1MELO3C008527.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007051CHORD domainPFAMPF04968CHORDcoord: 32..92
e-value: 7.4E-26
score: 90.5
IPR007051CHORD domainPROSITEPS51401CHORDcoord: 33..92
score: 31.023
NoneNo IPR availablePANTHERPTHR12621CYSTEINE AND HISTIDINE-RICH DOMAIN CHORD -CONTAINING PROTEINcoord: 22..90
NoneNo IPR availablePANTHERPTHR12621:SF8INTEGRIN BETA-1-BINDING PROTEIN 2coord: 22..90

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008527.2Csa2G110230Cucumber (Chinese Long) v2cumedB135
MELO3C008527.2CSPI02G08450Wild cucumber (PI 183967)cpimedB135
MELO3C008527.2Lsi11G009890Bottle gourd (USVL1VR-Ls)lsimedB125
MELO3C008527.2CsGy2G008760Cucumber (Gy14) v2cgybmedB122
MELO3C008527.2CsaV3_2G010830Cucumber (Chinese Long) v3cucmedB137
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008527.2Cucumber (Gy14) v1cgymedB443
MELO3C008527.2Cucurbita maxima (Rimu)cmamedB830
MELO3C008527.2Cucurbita moschata (Rifu)cmomedB823
MELO3C008527.2Cucurbita pepo (Zucchini)cpemedB125
MELO3C008527.2Wax gourdmedwgoB458