CSPI01G25660 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G25660
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMads box protein, putative
LocationChr1 : 21082546 .. 21083378 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGCAAATGACTCTGCAAGAAAGGCAACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCCCAACCCGAGCTTTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTAAGTGTAGTAGTAGTGCATGCTCTTGAAACGTTTATAAAAAAACATATTAATAAGGTGATCATATTGCCATATTATATGTATATAATTAAACGTGTAGCTTCTTAAAGAAAATAATAGAGAGGTATGAATGTTTTAAACAGGTGAACCAGGAGACATTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACCGCTGCAAAGGGACTACATGGTCTTAACATGCTTGATTTGAACGACCTCGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAATTAAACCATCTTCTTCACAACCTCAAGCTCAAGTTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCCACCGACGCAGCCACAAACTGCGGCATGGCTGATGGAGCTTGTGAGCCCTCAAGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAACAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

mRNA sequence

ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGCAAATGACTCTGCAAGAAAGGCAACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCCCAACCCGAGCTTTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTGAACCAGGAGACATTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACCGCTGCAAAGGGACTACATGGTCTTAACATGCTTGATTTGAACGACCTCGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAATTAAACCATCTTCTTCACAACCTCAAGCTCAAGTTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCCACCGACGCAGCCACAAACTGCGGCATGGCTGATGGAGCTTGTGAGCCCTCAAGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAACAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

Coding sequence (CDS)

ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGCAAATGACTCTGCAAGAAAGGCAACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCCCAACCCGAGCTTTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTGAACCAGGAGACATTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACCGCTGCAAAGGGACTACATGGTCTTAACATGCTTGATTTGAACGACCTCGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAATTAAACCATCTTCTTCACAACCTCAAGCTCAAGTTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCCACCGACGCAGCCACAAACTGCGGCATGGCTGATGGAGCTTGTGAGCCCTCAAGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAACAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG
Homology
[Close]
BLAST of CSPI01G25660 vs. Swiss-Prot
Match: AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.8e-50
Identity = 112/194 (57.73%), Postives = 142/194 (73.20%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKAT+KKRK+GLMKKV ELSTLCGI ACAII+SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-----IKPSSSQPQAQVQAQAQA 180
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+     I  SSS   A  +     
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIPM 180

Query: 181 QAQAPPTQPQTAAW 190
                 T P T  +
Sbjct: 181 PNLVATTAPTTTIY 194

[Close]
BLAST of CSPI01G25660 vs. Swiss-Prot
Match: PHE1_ARATH (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana GN=PHE1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-32
Identity = 77/161 (47.83%), Postives = 111/161 (68.94%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK T+ KRK+G++KK +EL TLCG++ACA+I SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSS 164
               +  L+  DL DL   +++ L  +  R++ LK    SS
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESS 162

[Close]
BLAST of CSPI01G25660 vs. Swiss-Prot
Match: PHE2_ARATH (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana GN=PHE2 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.7e-32
Identity = 79/174 (45.40%), Postives = 118/174 (67.82%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK T+ KRK+G+ KK++EL TLCG+EACA+++SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSL-KIKPSSSQPQAQVQAQAQA 176
               ++ L+  DL DL   ID+ L  +T RI+ L +   SSS     + A A A
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAA 175

[Close]
BLAST of CSPI01G25660 vs. Swiss-Prot
Match: AGL36_ARATH (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana GN=AGL36 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 1 

Query: 4   KKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIG 63
           KKVKL+ IAN+ +RK ++ KRK G+ KK+ ELSTLCG++ACA+I+SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   ++KKM++QET+L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK 158
               +  +  DL DL   I+  L  +  RI+S+K
Sbjct: 122 KMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIK 155

[Close]
BLAST of CSPI01G25660 vs. Swiss-Prot
Match: AGL90_ARATH (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana GN=AGL90 PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-29
Identity = 69/154 (44.81%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 4   KKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIG 63
           KKVKL+ IAN+ +RK ++ KRK G+ KK+ ELSTLCG++ACA+I+SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   +++KM++QET L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK 158
               +  +  DL DL   ++  L  +  RI+S+K
Sbjct: 122 KMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIK 155

[Close]
BLAST of CSPI01G25660 vs. TrEMBL
Match: A0A0A0LVS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560740 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 5.2e-118
Identity = 225/229 (98.25%), Postives = 225/229 (98.25%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQAQAP 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQV    QAQAQAP
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQV----QAQAQAP 180

Query: 181 PTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 230
           PTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 PTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]
BLAST of CSPI01G25660 vs. TrEMBL
Match: D7UAA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00300 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.2e-79
Identity = 165/241 (68.46%), Postives = 192/241 (79.67%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRK+GLMKKVSELSTLCGI+ACAI++SPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYITNDSARKATFKKRKKGLMKKVSELSTLCGIDACAILYSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVL+ FKKMPEMEQSKKMVNQE+FLRQRIAK NEQLKK RKDNREKEIT++M+QS
Sbjct: 61  PLGVQRVLAHFKKMPEMEQSKKMVNQESFLRQRIAKGNEQLKKQRKDNREKEITQVMYQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQA------- 180
           LT  KGL  LN++DLNDLGW+IDQNLKDI  RI+SL  K + SQ  A   A A       
Sbjct: 121 LT-GKGLQNLNIVDLNDLGWMIDQNLKDIHKRIESLN-KEAQSQAAAAAAAAAGQLIKTG 180

Query: 181 -QAQAQAPPTQP----QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFF 230
            +AQ + P        Q   W ++LV+P +QMGF GDDM+LPFGD   N++NA+W N FF
Sbjct: 181 GKAQEEKPAFDSMDAIQRQQWFVDLVNPNEQMGFAGDDMMLPFGD---NNHNALWPNGFF 236

[Close]
BLAST of CSPI01G25660 vs. TrEMBL
Match: B9S273_RICCO (Mads box protein, putative OS=Ricinus communis GN=RCOM_1708810 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.6e-74
Identity = 158/255 (61.96%), Postives = 194/255 (76.08%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+ND+ARKAT+KKRK+GLMKKVSELSTLCG++ACAII+SPYD+QPE+WPS
Sbjct: 1   MTRKKVKLAYISNDTARKATFKKRKKGLMKKVSELSTLCGVDACAIIYSPYDAQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            I VQRVLSQFK MPEMEQSKKMVNQE+FLRQRI KANEQLKK RKDNREKE+T++MFQS
Sbjct: 61  AIEVQRVLSQFKNMPEMEQSKKMVNQESFLRQRIGKANEQLKKQRKDNREKEVTQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK---------IKPSSSQPQAQV-- 180
           LT  K L+ LNM+DLNDLGW+I+Q LKDI  +++++            P  S P  Q+  
Sbjct: 121 LT-GKTLNNLNMMDLNDLGWIINQYLKDIYKKVETVSKEINRQVTAAPPPPSPPPQQLPP 180

Query: 181 -QAQAQAQAQAPPTQP--------------QTAAWLMELVSPQDQMGFVGDDMLLPFGDQ 230
               AQA A+  P+Q               Q   W+M+L++P + MGF+GD+M+LPFGD 
Sbjct: 181 PSGPAQAIAEVAPSQQAAERQAFEVNMEAMQRQQWIMDLINPHENMGFIGDEMMLPFGD- 240

[Close]
BLAST of CSPI01G25660 vs. TrEMBL
Match: V4SWL0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013728mg PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.8e-73
Identity = 154/242 (63.64%), Postives = 190/242 (78.51%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDSARKAT+KKRK+GL+KKVSELSTLCGI+ACAIIFSPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELSTLCGIDACAIIFSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVLSQFKKMPEMEQSKKMVNQ++FLRQRIAKANEQLKK RKDNREKEIT++MFQS
Sbjct: 61  PLGVQRVLSQFKKMPEMEQSKKMVNQDSFLRQRIAKANEQLKKQRKDNREKEITQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-------------IKPSSSQPQA 180
           LT  K L  LNM+DLNDLGWLI+QNLK+I  R+++L              +K +    Q 
Sbjct: 121 LT-GKALLNLNMMDLNDLGWLIEQNLKEICKRMETLSKGTSTHNSSNYGVVKNNGEASQQ 180

Query: 181 QVQAQAQAQAQAPPTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAF 230
           QV  ++    Q      Q   WL++L++PQ+ MGF G++++ PFG+ ++   + +WSN F
Sbjct: 181 QVD-KSSGFDQMSMEAMQKQQWLLDLMNPQEHMGFGGEEIMYPFGESSH---STLWSNPF 237

[Close]
BLAST of CSPI01G25660 vs. TrEMBL
Match: V4S796_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006519mg PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-72
Identity = 153/242 (63.22%), Postives = 189/242 (78.10%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDSARKAT+KKRK+GL+KKVSELSTLCGI+ACAIIFSPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELSTLCGIDACAIIFSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVLSQFKKMPEMEQSKKMVNQ++FLRQRIAKANEQLKK RKDNREKEIT++MFQS
Sbjct: 61  PLGVQRVLSQFKKMPEMEQSKKMVNQDSFLRQRIAKANEQLKKQRKDNREKEITQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-------------IKPSSSQPQA 180
           LT  K L  LNM+DLNDLGWLI+QNLK+I  R+++L              +K +    Q 
Sbjct: 121 LT-GKALLNLNMMDLNDLGWLIEQNLKEICKRMETLNNGASTHNSSNYGLVKNNGEASQQ 180

Query: 181 QVQAQAQAQAQAPPTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAF 230
           QV  ++    Q      Q   WL++L++ Q+ MGF G++++ PFG+ ++   + +WSN F
Sbjct: 181 QVD-KSSGFDQMSMEAMQKQQWLLDLMNLQEHMGFGGEEIMYPFGESSH---STLWSNPF 237

[Close]
BLAST of CSPI01G25660 vs. TAIR10
Match: AT5G48670.1 (AT5G48670.1 AGAMOUS-like 80)

HSP 1 Score: 198.4 bits (503), Expect = 4.9e-51
Identity = 112/194 (57.73%), Postives = 142/194 (73.20%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKAT+KKRK+GLMKKV ELSTLCGI ACAII+SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-----IKPSSSQPQAQVQAQAQA 180
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+     I  SSS   A  +     
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIPM 180

Query: 181 QAQAPPTQPQTAAW 190
                 T P T  +
Sbjct: 181 PNLVATTAPTTTIY 194

[Close]
BLAST of CSPI01G25660 vs. TAIR10
Match: AT5G26630.1 (AT5G26630.1 MADS-box transcription factor family protein)

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38
Identity = 81/165 (49.09%), Postives = 118/165 (71.52%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTR+KVK+ +I N++ARK+T+KKRK+GL+KK  EL  LCG+   A++ SPY+  PE+WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
                +V+SQ+K M  M+++KKMVNQETFL+QRI KA E  KK+RK+N+E E+  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK--IKPSSS 164
           L+    +  +   +L D G++I+Q LKD+  RI+ LK   +PSS+
Sbjct: 121 LSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRNNEPSSA 165

[Close]
BLAST of CSPI01G25660 vs. TAIR10
Match: AT1G65330.1 (AT1G65330.1 MADS-box transcription factor family protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 77/161 (47.83%), Postives = 111/161 (68.94%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK T+ KRK+G++KK +EL TLCG++ACA+I SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSS 164
               +  L+  DL DL   +++ L  +  R++ LK    SS
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESS 162

[Close]
BLAST of CSPI01G25660 vs. TAIR10
Match: AT1G65300.1 (AT1G65300.1 AGAMOUS-like 38)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-33
Identity = 79/174 (45.40%), Postives = 118/174 (67.82%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK T+ KRK+G+ KK++EL TLCG+EACA+++SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSL-KIKPSSSQPQAQVQAQAQA 176
               ++ L+  DL DL   ID+ L  +T RI+ L +   SSS     + A A A
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAA 175

[Close]
BLAST of CSPI01G25660 vs. TAIR10
Match: AT3G05860.1 (AT3G05860.1 MADS-box transcription factor family protein)

HSP 1 Score: 138.3 bits (347), Expect = 6.1e-33
Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKK+ L+YI N+S RKAT+ KRK+GL+KK+ ELS LCGIEACA+I+SP++S PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  E   K   DN E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LTAAKGLHGLNMLDLN--DLGWLIDQNLKDI 150
           L + KG   LN+ D N  DL   IDQ LK++
Sbjct: 121 LLSGKG-EKLNLTDRNREDLCKYIDQYLKEL 149

[Close]
BLAST of CSPI01G25660 vs. NCBI nr
Match: gi|449435956|ref|XP_004135760.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 7.5e-118
Identity = 225/229 (98.25%), Postives = 225/229 (98.25%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQAQAP 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQV    QAQAQAP
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQV----QAQAQAP 180

Query: 181 PTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 230
           PTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 PTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]
BLAST of CSPI01G25660 vs. NCBI nr
Match: gi|659099266|ref|XP_008450513.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo])

HSP 1 Score: 412.9 bits (1060), Expect = 3.6e-112
Identity = 218/229 (95.20%), Postives = 218/229 (95.20%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQAQAP 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK KPS  QPQAQ QAQA      P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-KPSLPQPQAQAQAQA-----PP 180

Query: 181 PTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 230
            TQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 TTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]
BLAST of CSPI01G25660 vs. NCBI nr
Match: gi|225450435|ref|XP_002279507.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Vitis vinifera])

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78
Identity = 165/241 (68.46%), Postives = 192/241 (79.67%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRK+GLMKKVSELSTLCGI+ACAI++SPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYITNDSARKATFKKRKKGLMKKVSELSTLCGIDACAILYSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVL+ FKKMPEMEQSKKMVNQE+FLRQRIAK NEQLKK RKDNREKEIT++M+QS
Sbjct: 61  PLGVQRVLAHFKKMPEMEQSKKMVNQESFLRQRIAKGNEQLKKQRKDNREKEITQVMYQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQA------- 180
           LT  KGL  LN++DLNDLGW+IDQNLKDI  RI+SL  K + SQ  A   A A       
Sbjct: 121 LT-GKGLQNLNIVDLNDLGWMIDQNLKDIHKRIESLN-KEAQSQAAAAAAAAAGQLIKTG 180

Query: 181 -QAQAQAPPTQP----QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFF 230
            +AQ + P        Q   W ++LV+P +QMGF GDDM+LPFGD   N++NA+W N FF
Sbjct: 181 GKAQEEKPAFDSMDAIQRQQWFVDLVNPNEQMGFAGDDMMLPFGD---NNHNALWPNGFF 236

[Close]
BLAST of CSPI01G25660 vs. NCBI nr
Match: gi|1009116500|ref|XP_015874807.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Ziziphus jujuba])

HSP 1 Score: 295.8 bits (756), Expect = 6.4e-77
Identity = 164/248 (66.13%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDSARKAT+KKRK+GL+KKV ELSTLC ++ACAII+SPYD+QPEL+PS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLVKKVGELSTLCDVDACAIIYSPYDTQPELFPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVLS+FKKMPEMEQSKKMVNQE+FLRQRIAKANEQLKK RKDNREKE+TR+MFQS
Sbjct: 61  PLGVQRVLSKFKKMPEMEQSKKMVNQESFLRQRIAKANEQLKKQRKDNREKEMTRVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQ-------- 180
           LT  KGL GLNM+DLNDLGWLIDQNLKDI  RI+S K + SS +                
Sbjct: 121 LT-GKGLQGLNMMDLNDLGWLIDQNLKDINKRIESHKAEASSQKHDVAAPGMSSAADGMA 180

Query: 181 ------AQAQAQAPPTQ-----PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNA 230
                 +QA A+ P  +      Q   W M+L++PQ+ +GF GD+M+LPFGD  +NH NA
Sbjct: 181 RSGENGSQAMAEKPAFEVNVETMQRQQWFMDLMNPQEGLGFGGDEMILPFGD--HNH-NA 240

[Close]
BLAST of CSPI01G25660 vs. NCBI nr
Match: gi|255558128|ref|XP_002520092.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Ricinus communis])

HSP 1 Score: 286.2 bits (731), Expect = 5.1e-74
Identity = 158/255 (61.96%), Postives = 194/255 (76.08%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+ND+ARKAT+KKRK+GLMKKVSELSTLCG++ACAII+SPYD+QPE+WPS
Sbjct: 1   MTRKKVKLAYISNDTARKATFKKRKKGLMKKVSELSTLCGVDACAIIYSPYDAQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            I VQRVLSQFK MPEMEQSKKMVNQE+FLRQRI KANEQLKK RKDNREKE+T++MFQS
Sbjct: 61  AIEVQRVLSQFKNMPEMEQSKKMVNQESFLRQRIGKANEQLKKQRKDNREKEVTQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK---------IKPSSSQPQAQV-- 180
           LT  K L+ LNM+DLNDLGW+I+Q LKDI  +++++            P  S P  Q+  
Sbjct: 121 LT-GKTLNNLNMMDLNDLGWIINQYLKDIYKKVETVSKEINRQVTAAPPPPSPPPQQLPP 180

Query: 181 -QAQAQAQAQAPPTQP--------------QTAAWLMELVSPQDQMGFVGDDMLLPFGDQ 230
               AQA A+  P+Q               Q   W+M+L++P + MGF+GD+M+LPFGD 
Sbjct: 181 PSGPAQAIAEVAPSQQAAERQAFEVNMEAMQRQQWIMDLINPHENMGFIGDEMMLPFGD- 240

The following BLAST results are available for this feature:
BLAST of CSPI01G25660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGL80_ARATH8.8e-5057.73Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1[more]
PHE1_ARATH2.2e-3247.83MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana GN=PHE1 PE=1 SV=1[more]
PHE2_ARATH3.7e-3245.40MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana GN=PHE2 PE=1 SV=1[more]
AGL36_ARATH2.0e-3046.10Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana GN=AGL36 PE=1 SV=1[more]
AGL90_ARATH1.3e-2944.81Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana GN=AGL90 PE=1 SV=2[more]
BLAST of CSPI01G25660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVS3_CUCSA5.2e-11898.25Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560740 PE=4 SV=1[more]
D7UAA8_VITVI8.2e-7968.46Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00300 PE=4 SV=... [more]
B9S273_RICCO3.6e-7461.96Mads box protein, putative OS=Ricinus communis GN=RCOM_1708810 PE=4 SV=1[more]
V4SWL0_9ROSI1.8e-7363.64Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013728mg PE=4 SV=1[more]
V4S796_9ROSI2.6e-7263.22Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006519mg PE=4 SV=1[more]
BLAST of CSPI01G25660 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48670.14.9e-5157.73 AGAMOUS-like 80[more]
AT5G26630.12.2e-3849.09 MADS-box transcription factor family protein[more]
AT1G65330.11.2e-3347.83 MADS-box transcription factor family protein[more]
AT1G65300.12.1e-3345.40 AGAMOUS-like 38[more]
AT3G05860.16.1e-3351.66 MADS-box transcription factor family protein[more]
BLAST of CSPI01G25660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435956|ref|XP_004135760.1|7.5e-11898.25PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus][more]
gi|659099266|ref|XP_008450513.1|3.6e-11295.20PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo][more]
gi|225450435|ref|XP_002279507.1|1.2e-7868.46PREDICTED: agamous-like MADS-box protein AGL80 [Vitis vinifera][more]
gi|1009116500|ref|XP_015874807.1|6.4e-7766.13PREDICTED: agamous-like MADS-box protein AGL80 [Ziziphus jujuba][more]
gi|255558128|ref|XP_002520092.1|5.1e-7461.96PREDICTED: agamous-like MADS-box protein AGL80 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000987 core promoter proximal region sequence-specific DNA binding
molecular_function GO:0000982 transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G25660.1CSPI01G25660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 23..38
score: 3.6E-10coord: 38..59
score: 3.6E-10coord: 3..23
score: 3.6
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 11..51
score: 7.3
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 4.6
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..49
score: 17
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 2..95
score: 4.45
NoneNo IPR availableunknownCoilCoilcoord: 87..114
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..222
score: 1.4E
NoneNo IPR availablePANTHERPTHR11945:SF183AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATEDcoord: 2..222
score: 1.4E