Cucsa.050930 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.050930
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMads box protein, putative
Locationscaffold00557 : 132419 .. 133245 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGCAAATGACTCTGCAAGAAAGGCAACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCCCAACCCGAGCTTTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTAAGTGTAGTAGTAGTGCATGCTCTTGAAACGTTTATAAAAAAACATATTAATAAGGTGATCATATTGCCATATTATATGTATATAATTAAACGTGTAGCTTCTTAAAGAAAATAATAGAGAGGTATGAATGTTTTAAACAGGTGAACCAGGAGACATTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACCGCTGCAAAGGGACTACATGGTCTTAACATGCTTGATTTGAACGACCTCGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAATTAAACCATCTTCTTCACAACCTCAAGCTCAAGTTCAGGCTCAGGCTCAGGCTCAGGCTCTACCGACGCAGCCACAAACTGCGGCATGGCTGATGGAGCTTGTGAGCCCTCAAGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAACAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

mRNA sequence

ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGCAAATGACTCTGCAAGAAAGGCAACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCCCAACCCGAGCTTTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTGAACCAGGAGACATTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACCGCTGCAAAGGGACTACATGGTCTTAACATGCTTGATTTGAACGACCTCGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAATTAAACCATCTTCTTCACAACCTCAAGCTCAAGTTCAGGCTCAGGCTCAGGCTCAGGCTCTACCGACGCAGCCACAAACTGCGGCATGGCTGATGGAGCTTGTGAGCCCTCAAGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAACAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

Coding sequence (CDS)

ATGACAAGGAAGAAAGTGAAACTTGCTTACATTGCAAATGACTCTGCAAGAAAGGCAACATACAAGAAGAGGAAGAGAGGGCTTATGAAAAAGGTTAGTGAATTAAGCACTCTTTGTGGGATTGAGGCATGTGCAATCATCTTTAGTCCCTATGATTCCCAACCCGAGCTTTGGCCTTCCCCTATTGGCGTCCAGCGCGTTCTTTCCCAGTTCAAGAAGATGCCCGAGATGGAGCAAAGTAAGAAGATGGTGAACCAGGAGACATTTTTGCGACAAAGGATTGCAAAGGCGAACGAGCAATTGAAGAAAATGAGAAAGGACAACCGGGAGAAAGAGATCACACGGTTGATGTTTCAGAGCCTCACCGCTGCAAAGGGACTACATGGTCTTAACATGCTTGATTTGAACGACCTCGGTTGGCTCATTGATCAAAATCTTAAAGATATTACTATACGCATTGACTCTCTTAAAATTAAACCATCTTCTTCACAACCTCAAGCTCAAGTTCAGGCTCAGGCTCAGGCTCAGGCTCTACCGACGCAGCCACAAACTGCGGCATGGCTGATGGAGCTTGTGAGCCCTCAAGATCAAATGGGGTTTGTTGGGGATGATATGCTTTTGCCTTTTGGGGATCAAACTTATAACCATAACAATGCAATGTGGTCTAATGCCTTTTTCCCTTAG

Protein sequence

MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQALPTQPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP*
Homology
[Close]
BLAST of Cucsa.050930 vs. Swiss-Prot
Match: AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.9e-55
Identity = 107/179 (59.78%), Postives = 138/179 (77.09%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKAT+KKRK+GLMKKV ELSTLCGI ACAII+SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQALP 180
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+   +     + V   A    +P
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIP 179

[Close]
BLAST of Cucsa.050930 vs. Swiss-Prot
Match: PHE2_ARATH (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana GN=PHE2 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.2e-36
Identity = 79/174 (45.40%), Postives = 118/174 (67.82%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK T+ KRK+G+ KK++EL TLCG+EACA+++SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSL-KIKPSSSQPQAQVQAQAQA 176
               ++ L+  DL DL   ID+ L  +T RI+ L +   SSS     + A A A
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAA 175

[Close]
BLAST of Cucsa.050930 vs. Swiss-Prot
Match: PHE1_ARATH (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana GN=PHE1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.1e-35
Identity = 77/161 (47.83%), Postives = 111/161 (68.94%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK T+ KRK+G++KK +EL TLCG++ACA+I SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSS 164
               +  L+  DL DL   +++ L  +  R++ LK    SS
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESS 162

[Close]
BLAST of Cucsa.050930 vs. Swiss-Prot
Match: AGL36_ARATH (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana GN=AGL36 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-33
Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 1 

Query: 4   KKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIG 63
           KKVKL+ IAN+ +RK ++ KRK G+ KK+ ELSTLCG++ACA+I+SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   ++KKM++QET+L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK 158
               +  +  DL DL   I+  L  +  RI+S+K
Sbjct: 122 KMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIK 155

[Close]
BLAST of Cucsa.050930 vs. Swiss-Prot
Match: AGL90_ARATH (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana GN=AGL90 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-32
Identity = 69/154 (44.81%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 4   KKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPIG 63
           KKVKL+ IAN+ +RK ++ KRK G+ KK+ ELSTLCG++ACA+I+SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTA 123
            ++V S+F +MP   +++KM++QET L +RI KA EQLK +  +NRE ++ R MF  +  
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK 158
               +  +  DL DL   ++  L  +  RI+S+K
Sbjct: 122 KMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIK 155

[Close]
BLAST of Cucsa.050930 vs. TrEMBL
Match: A0A0A0LVS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560740 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.0e-121
Identity = 224/227 (98.68%), Postives = 224/227 (98.68%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQALPT 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQA   PT
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAP--PT 180

Query: 181 QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 228
           QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]
BLAST of Cucsa.050930 vs. TrEMBL
Match: D7UAA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00300 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.4e-83
Identity = 162/240 (67.50%), Postives = 189/240 (78.75%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRK+GLMKKVSELSTLCGI+ACAI++SPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYITNDSARKATFKKRKKGLMKKVSELSTLCGIDACAILYSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVL+ FKKMPEMEQSKKMVNQE+FLRQRIAK NEQLKK RKDNREKEIT++M+QS
Sbjct: 61  PLGVQRVLAHFKKMPEMEQSKKMVNQESFLRQRIAKGNEQLKKQRKDNREKEITQVMYQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQ-----A 180
           LT  KGL  LN++DLNDLGW+IDQNLKDI  RI+SL  +  S    A   A  Q      
Sbjct: 121 LT-GKGLQNLNIVDLNDLGWMIDQNLKDIHKRIESLNKEAQSQAAAAAAAAAGQLIKTGG 180

Query: 181 QALPTQP--------QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 228
           +A   +P        Q   W ++LV+P +QMGF GDDM+LPFGD   N++NA+W N FFP
Sbjct: 181 KAQEEKPAFDSMDAIQRQQWFVDLVNPNEQMGFAGDDMMLPFGD---NNHNALWPNGFFP 236

[Close]
BLAST of Cucsa.050930 vs. TrEMBL
Match: B9S273_RICCO (Mads box protein, putative OS=Ricinus communis GN=RCOM_1708810 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.1e-79
Identity = 158/255 (61.96%), Postives = 194/255 (76.08%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+ND+ARKAT+KKRK+GLMKKVSELSTLCG++ACAII+SPYD+QPE+WPS
Sbjct: 1   MTRKKVKLAYISNDTARKATFKKRKKGLMKKVSELSTLCGVDACAIIYSPYDAQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            I VQRVLSQFK MPEMEQSKKMVNQE+FLRQRI KANEQLKK RKDNREKE+T++MFQS
Sbjct: 61  AIEVQRVLSQFKNMPEMEQSKKMVNQESFLRQRIGKANEQLKKQRKDNREKEVTQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK---------IKPSSSQPQAQV-- 180
           LT  K L+ LNM+DLNDLGW+I+Q LKDI  +++++            P  S P  Q+  
Sbjct: 121 LT-GKTLNNLNMMDLNDLGWIINQYLKDIYKKVETVSKEINRQVTAAPPPPSPPPQQLPP 180

Query: 181 ---QAQAQAQALPTQP--------------QTAAWLMELVSPQDQMGFVGDDMLLPFGDQ 228
               AQA A+  P+Q               Q   W+M+L++P + MGF+GD+M+LPFGD 
Sbjct: 181 PSGPAQAIAEVAPSQQAAERQAFEVNMEAMQRQQWIMDLINPHENMGFIGDEMMLPFGD- 240

[Close]
BLAST of Cucsa.050930 vs. TrEMBL
Match: V4SWL0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013728mg PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.8e-78
Identity = 153/241 (63.49%), Postives = 190/241 (78.84%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDSARKAT+KKRK+GL+KKVSELSTLCGI+ACAIIFSPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELSTLCGIDACAIIFSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVLSQFKKMPEMEQSKKMVNQ++FLRQRIAKANEQLKK RKDNREKEIT++MFQS
Sbjct: 61  PLGVQRVLSQFKKMPEMEQSKKMVNQDSFLRQRIAKANEQLKKQRKDNREKEITQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-------------IKPSSSQPQA 180
           LT  K L  LNM+DLNDLGWLI+QNLK+I  R+++L              +K +    Q 
Sbjct: 121 LT-GKALLNLNMMDLNDLGWLIEQNLKEICKRMETLSKGTSTHNSSNYGVVKNNGEASQQ 180

Query: 181 QVQAQAQAQALPTQP-QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFF 228
           QV   +    +  +  Q   WL++L++PQ+ MGF G++++ PFG+ ++   + +WSN F+
Sbjct: 181 QVDKSSGFDQMSMEAMQKQQWLLDLMNPQEHMGFGGEEIMYPFGESSH---STLWSNPFY 237

[Close]
BLAST of Cucsa.050930 vs. TrEMBL
Match: V4S796_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006519mg PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.6e-77
Identity = 152/241 (63.07%), Postives = 189/241 (78.42%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDSARKAT+KKRK+GL+KKVSELSTLCGI+ACAIIFSPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLLKKVSELSTLCGIDACAIIFSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVLSQFKKMPEMEQSKKMVNQ++FLRQRIAKANEQLKK RKDNREKEIT++MFQS
Sbjct: 61  PLGVQRVLSQFKKMPEMEQSKKMVNQDSFLRQRIAKANEQLKKQRKDNREKEITQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-------------IKPSSSQPQA 180
           LT  K L  LNM+DLNDLGWLI+QNLK+I  R+++L              +K +    Q 
Sbjct: 121 LT-GKALLNLNMMDLNDLGWLIEQNLKEICKRMETLNNGASTHNSSNYGLVKNNGEASQQ 180

Query: 181 QVQAQAQAQALPTQP-QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFF 228
           QV   +    +  +  Q   WL++L++ Q+ MGF G++++ PFG+ ++   + +WSN F+
Sbjct: 181 QVDKSSGFDQMSMEAMQKQQWLLDLMNLQEHMGFGGEEIMYPFGESSH---STLWSNPFY 237

[Close]
BLAST of Cucsa.050930 vs. TAIR10
Match: AT5G48670.1 (AT5G48670.1 AGAMOUS-like 80)

HSP 1 Score: 215.3 bits (547), Expect = 3.9e-56
Identity = 107/179 (59.78%), Postives = 138/179 (77.09%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKAT+KKRK+GLMKKV ELSTLCGI ACAII+SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQALP 180
           L     +  LN++DLNDLG++I+Q LKD+  RI+ L+   +     + V   A    +P
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIP 179

[Close]
BLAST of Cucsa.050930 vs. TAIR10
Match: AT5G26630.1 (AT5G26630.1 MADS-box transcription factor family protein)

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-42
Identity = 82/179 (45.81%), Postives = 119/179 (66.48%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTR+KVK+ +I N++ARK+T+KKRK+GL+KK  EL  LCG+   A++ SPY+  PE+WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
                +V+SQ+K M  M+++KKMVNQETFL+QRI KA E  KK+RK+N+E E+  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQALP 180
           L+    +  +   +L D G++I+Q LKD+  RI+ LK     S     V A   +  +P
Sbjct: 121 LSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRNNEPSSALVPVAAPTTSSVMP 179

[Close]
BLAST of Cucsa.050930 vs. TAIR10
Match: AT1G65300.1 (AT1G65300.1 AGAMOUS-like 38)

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-37
Identity = 79/174 (45.40%), Postives = 118/174 (67.82%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           ++K+KL+ I N  +RK T+ KRK+G+ KK++EL TLCG+EACA+++SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSL-KIKPSSSQPQAQVQAQAQA 176
               ++ L+  DL DL   ID+ L  +T RI+ L +   SSS     + A A A
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAA 175

[Close]
BLAST of Cucsa.050930 vs. TAIR10
Match: AT1G65330.1 (AT1G65330.1 MADS-box transcription factor family protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 77/161 (47.83%), Postives = 111/161 (68.94%), Query Frame = 1 

Query: 3   RKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPSPI 62
           R K+KL++I NDS RK T+ KRK+G++KK +EL TLCG++ACA+I SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 AAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSS 164
               +  L+  DL DL   +++ L  +  R++ LK    SS
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEILKENGESS 162

[Close]
BLAST of Cucsa.050930 vs. TAIR10
Match: AT3G05860.1 (AT3G05860.1 MADS-box transcription factor family protein)

HSP 1 Score: 147.5 bits (371), Expect = 9.9e-36
Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKK+ L+YI N+S RKAT+ KRK+GL+KK+ ELS LCGIEACA+I+SP++S PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  E   K   DN E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LTAAKGLHGLNMLDLN--DLGWLIDQNLKDI 150
           L + KG   LN+ D N  DL   IDQ LK++
Sbjct: 121 LLSGKG-EKLNLTDRNREDLCKYIDQYLKEL 149

[Close]
BLAST of Cucsa.050930 vs. NCBI nr
Match: gi|449435956|ref|XP_004135760.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-121
Identity = 224/227 (98.68%), Postives = 224/227 (98.68%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQALPT 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQA   PT
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAP--PT 180

Query: 181 QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 228
           QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 225

[Close]
BLAST of Cucsa.050930 vs. NCBI nr
Match: gi|659099266|ref|XP_008450513.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 9.1e-116
Identity = 217/227 (95.59%), Postives = 217/227 (95.59%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAQALPT 180
           LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK KPS  QPQAQ QAQA      T
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK-KPSLPQPQAQAQAQAPP---TT 180

Query: 181 QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 228
           QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP
Sbjct: 181 QPQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 223

[Close]
BLAST of Cucsa.050930 vs. NCBI nr
Match: gi|225450435|ref|XP_002279507.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Vitis vinifera])

HSP 1 Score: 315.5 bits (807), Expect = 7.8e-83
Identity = 162/240 (67.50%), Postives = 189/240 (78.75%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKAT+KKRK+GLMKKVSELSTLCGI+ACAI++SPYDSQPE+WPS
Sbjct: 1   MTRKKVKLAYITNDSARKATFKKRKKGLMKKVSELSTLCGIDACAILYSPYDSQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVL+ FKKMPEMEQSKKMVNQE+FLRQRIAK NEQLKK RKDNREKEIT++M+QS
Sbjct: 61  PLGVQRVLAHFKKMPEMEQSKKMVNQESFLRQRIAKGNEQLKKQRKDNREKEITQVMYQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQ-----A 180
           LT  KGL  LN++DLNDLGW+IDQNLKDI  RI+SL  +  S    A   A  Q      
Sbjct: 121 LT-GKGLQNLNIVDLNDLGWMIDQNLKDIHKRIESLNKEAQSQAAAAAAAAAGQLIKTGG 180

Query: 181 QALPTQP--------QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNAMWSNAFFP 228
           +A   +P        Q   W ++LV+P +QMGF GDDM+LPFGD   N++NA+W N FFP
Sbjct: 181 KAQEEKPAFDSMDAIQRQQWFVDLVNPNEQMGFAGDDMMLPFGD---NNHNALWPNGFFP 236

[Close]
BLAST of Cucsa.050930 vs. NCBI nr
Match: gi|1009116500|ref|XP_015874807.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Ziziphus jujuba])

HSP 1 Score: 312.4 bits (799), Expect = 6.6e-82
Identity = 164/248 (66.13%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDSARKAT+KKRK+GL+KKV ELSTLC ++ACAII+SPYD+QPEL+PS
Sbjct: 1   MTRKKVKLAYISNDSARKATFKKRKKGLVKKVGELSTLCDVDACAIIYSPYDTQPELFPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
           P+GVQRVLS+FKKMPEMEQSKKMVNQE+FLRQRIAKANEQLKK RKDNREKE+TR+MFQS
Sbjct: 61  PLGVQRVLSKFKKMPEMEQSKKMVNQESFLRQRIAKANEQLKKQRKDNREKEMTRVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQA----- 180
           LT  KGL GLNM+DLNDLGWLIDQNLKDI  RI+S K + SS +        + A     
Sbjct: 121 LT-GKGLQGLNMMDLNDLGWLIDQNLKDINKRIESHKAEASSQKHDVAAPGMSSAADGMA 180

Query: 181 -------QALPTQP---------QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTYNHNNA 228
                  QA+  +P         Q   W M+L++PQ+ +GF GD+M+LPFGD  +NH NA
Sbjct: 181 RSGENGSQAMAEKPAFEVNVETMQRQQWFMDLMNPQEGLGFGGDEMILPFGD--HNH-NA 240

[Close]
BLAST of Cucsa.050930 vs. NCBI nr
Match: gi|255558128|ref|XP_002520092.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Ricinus communis])

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78
Identity = 158/255 (61.96%), Postives = 194/255 (76.08%), Query Frame = 1 

Query: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60
           MTRKKVKLAYI+ND+ARKAT+KKRK+GLMKKVSELSTLCG++ACAII+SPYD+QPE+WPS
Sbjct: 1   MTRKKVKLAYISNDTARKATFKKRKKGLMKKVSELSTLCGVDACAIIYSPYDAQPEVWPS 60

Query: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            I VQRVLSQFK MPEMEQSKKMVNQE+FLRQRI KANEQLKK RKDNREKE+T++MFQS
Sbjct: 61  AIEVQRVLSQFKNMPEMEQSKKMVNQESFLRQRIGKANEQLKKQRKDNREKEVTQVMFQS 120

Query: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLK---------IKPSSSQPQAQV-- 180
           LT  K L+ LNM+DLNDLGW+I+Q LKDI  +++++            P  S P  Q+  
Sbjct: 121 LT-GKTLNNLNMMDLNDLGWIINQYLKDIYKKVETVSKEINRQVTAAPPPPSPPPQQLPP 180

Query: 181 ---QAQAQAQALPTQP--------------QTAAWLMELVSPQDQMGFVGDDMLLPFGDQ 228
               AQA A+  P+Q               Q   W+M+L++P + MGF+GD+M+LPFGD 
Sbjct: 181 PSGPAQAIAEVAPSQQAAERQAFEVNMEAMQRQQWIMDLINPHENMGFIGDEMMLPFGD- 240

The following BLAST results are available for this feature:
BLAST of Cucsa.050930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGL80_ARATH6.9e-5559.78Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1[more]
PHE2_ARATH3.2e-3645.40MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana GN=PHE2 PE=1 SV=1[more]
PHE1_ARATH2.1e-3547.83MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana GN=PHE1 PE=1 SV=1[more]
AGL36_ARATH3.3e-3346.10Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana GN=AGL36 PE=1 SV=1[more]
AGL90_ARATH2.2e-3244.81Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana GN=AGL90 PE=1 SV=2[more]
BLAST of Cucsa.050930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVS3_CUCSA1.0e-12198.68Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560740 PE=4 SV=1[more]
D7UAA8_VITVI5.4e-8367.50Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00300 PE=4 SV=... [more]
B9S273_RICCO8.1e-7961.96Mads box protein, putative OS=Ricinus communis GN=RCOM_1708810 PE=4 SV=1[more]
V4SWL0_9ROSI1.8e-7863.49Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013728mg PE=4 SV=1[more]
V4S796_9ROSI2.6e-7763.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006519mg PE=4 SV=1[more]
BLAST of Cucsa.050930 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48670.13.9e-5659.78 AGAMOUS-like 80[more]
AT5G26630.12.4e-4245.81 MADS-box transcription factor family protein[more]
AT1G65300.11.8e-3745.40 AGAMOUS-like 38[more]
AT1G65330.11.2e-3647.83 MADS-box transcription factor family protein[more]
AT3G05860.19.9e-3651.66 MADS-box transcription factor family protein[more]
BLAST of Cucsa.050930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435956|ref|XP_004135760.1|1.5e-12198.68PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis sativus][more]
gi|659099266|ref|XP_008450513.1|9.1e-11695.59PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo][more]
gi|225450435|ref|XP_002279507.1|7.8e-8367.50PREDICTED: agamous-like MADS-box protein AGL80 [Vitis vinifera][more]
gi|1009116500|ref|XP_015874807.1|6.6e-8266.13PREDICTED: agamous-like MADS-box protein AGL80 [Ziziphus jujuba][more]
gi|255558128|ref|XP_002520092.1|1.2e-7861.96PREDICTED: agamous-like MADS-box protein AGL80 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.050930.1Cucsa.050930.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 3.5E-10coord: 23..38
score: 3.5E-10coord: 3..23
score: 3.5
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 11..51
score: 7.2
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 4.6
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..49
score: 17
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 2..95
score: 4.32
NoneNo IPR availableunknownCoilCoilcoord: 87..114
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..220
score: 5.5E
NoneNo IPR availablePANTHERPTHR11945:SF183AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATEDcoord: 2..220
score: 5.5E