CSPI01G14470 (gene) Wild cucumber (PI 183967)

NameCSPI01G14470
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 10132209 .. 10133140 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCAGCCGCCTCTTCCTCTTCCTCTCACTCACAACCCCCTCGTTCTCAGCAACAAATGATCCATAAATTCATCGATGCTTTGCGCCAACAGGTGAATAATATATCATCATCTTCACTCTCTGTTTTTTCAATTTTCTTGAGTTCTGATTGGGTTTCTTTCTAGGGATTTCTTGATGATGATTTCAATAACCGGAGAACTGCCCCTGGGCATCTAGATTCATTGGTAACATTCTGCGTCGAGTCCGAACCTAAGCTCGAAATCATCCAGAAATCTCTGTAATGATTCAAAAACCCTAAAAACCCTAACACGGTTCCTTTTCTTTCTTTTTTTTTTGGTATTTAATGTAATTACTTCGTTCCGTTTTGGTTCTTTCAGGGAAGGTGAGCATTTGGATTTTCGTACTGCGATTAGCACTGCAGAAATGATCCGATCTGCTGCGGCAAGGTAATTTCGGATCAATTCGATTTAAAATTCTTGTTTCTGTTTCTTTTATAAAAGTGGGTTTGAGGATAATTTGAAGGGTTTTGTTTATGATTATGATCTGATCGAACAGAGTCGGTGGATCTCGAGTAGCAAGTGCTTGTATTGCATTACAAGAGCATTTGAATAACAATAACCTTAATGGGTAATCAACTGTGTTAATTAGTTTAACTAATAAGTCTTTAAAACAATTTGATGATGATTATTCTTAAATCTTATTATTATTTTTACTTTTTCTTCGTCAGTTCAAAAGAAGCTTACAAGAAACTCTCCTGGGAATACTATGTCATACGTGATTCTTTCCACCACATGCTTCAAGTAATTTTATTTCCTCATTTTTTTCTTTAATATATATAAATGATTTCTTGAAAATTTTACCAAGATATCAATTATTTCTTGTGTTGGTTTTTGTGATTTAACAGGCTGAGAAGACAGTGGAGGTTTAA

mRNA sequence

ATGTCTGCAGCCGCCTCTTCCTCTTCCTCTCACTCACAACCCCCTCGTTCTCAGCAACAAATGATCCATAAATTCATCGATGCTTTGCGCCAACAGGGATTTCTTGATGATGATTTCAATAACCGGAGAACTGCCCCTGGGCATCTAGATTCATTGGTAACATTCTGCGTCGAGTCCGAACCTAAGCTCGAAATCATCCAGAAATCTCTGGAAGGTGAGCATTTGGATTTTCGTACTGCGATTAGCACTGCAGAAATGATCCGATCTGCTGCGGCAAGAGTCGGTGGATCTCGAGTAGCAAGTGCTTGTATTGCATTACAAGAGCATTTGAATAACAATAACCTTAATGGTTCAAAAGAAGCTTACAAGAAACTCTCCTGGGAATACTATGTCATACGTGATTCTTTCCACCACATGCTTCAAGCTGAGAAGACAGTGGAGGTTTAA

Coding sequence (CDS)

ATGTCTGCAGCCGCCTCTTCCTCTTCCTCTCACTCACAACCCCCTCGTTCTCAGCAACAAATGATCCATAAATTCATCGATGCTTTGCGCCAACAGGGATTTCTTGATGATGATTTCAATAACCGGAGAACTGCCCCTGGGCATCTAGATTCATTGGTAACATTCTGCGTCGAGTCCGAACCTAAGCTCGAAATCATCCAGAAATCTCTGGAAGGTGAGCATTTGGATTTTCGTACTGCGATTAGCACTGCAGAAATGATCCGATCTGCTGCGGCAAGAGTCGGTGGATCTCGAGTAGCAAGTGCTTGTATTGCATTACAAGAGCATTTGAATAACAATAACCTTAATGGTTCAAAAGAAGCTTACAAGAAACTCTCCTGGGAATACTATGTCATACGTGATTCTTTCCACCACATGCTTCAAGCTGAGAAGACAGTGGAGGTTTAA
BLAST of CSPI01G14470 vs. TrEMBL
Match: A0A0A0LVC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153540 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 7.2e-76
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1

Query: 1   MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE 60
           MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE
Sbjct: 1   MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE 120
           PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE
Sbjct: 61  PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLSWEYYVIRDSFHHMLQAEKTVEV 149
           AYKKLSWEYYVIRDSFHHMLQAEKTVEV
Sbjct: 121 AYKKLSWEYYVIRDSFHHMLQAEKTVEV 148

BLAST of CSPI01G14470 vs. TrEMBL
Match: U5GFZ5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s19690g PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-06
Identity = 34/127 (26.77%), Postives = 65/127 (51.18%), Query Frame = 1

Query: 25  FIDALRQQGFLDDDFNNRRTAPGH-----LDSLVTFCVESEPKLEIIQKSLEGEHLDFRT 84
           F+ +L +QG LD  F+     P       +D + TFC ++E  +  + + L    +++  
Sbjct: 13  FVKSLHEQGILDSHFDEILDLPRESPQFVIDLVSTFCSDAENAIAALIRYLNEPDINYSR 72

Query: 85  AISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYVIRDSFHHM 144
            I     IR A++ +GG R+A AC  L+    + + +    A+ K   EY ++++ F+ +
Sbjct: 73  VIDQVHQIRGASSCIGGHRMALACRELRYACEDKDKDRCLAAFGKTKDEYQILKEKFNII 132

Query: 145 LQAEKTV 147
           LQ E+T+
Sbjct: 133 LQMERTM 139

BLAST of CSPI01G14470 vs. TrEMBL
Match: V7BJ51_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G167900g PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-06
Identity = 37/135 (27.41%), Postives = 69/135 (51.11%), Query Frame = 1

Query: 19  QQMIHKFIDALRQQGFLDDDFNNRR-----TAPGHLDSLVT-FCVESEPKLEIIQKSLEG 78
           Q  + +   A+ QQGFLDD F+  +     + P  +  +VT F  +SE  L+ + + LE 
Sbjct: 9   QAKLREHQSAMFQQGFLDDQFSQLQKLQDESTPDFVLEVVTMFFDDSENLLKNMARCLEQ 68

Query: 79  EHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYVI 138
              DF+   + A   + ++A VG +RV S C   +      NL+G     ++L  EY ++
Sbjct: 69  VPADFKQIDAYAHQYKGSSASVGAARVKSVCATFRTFCETKNLDGCMRCLQQLQQEYSLL 128

Query: 139 RDSFHHMLQAEKTVE 148
           ++S  ++ + +K ++
Sbjct: 129 KNSLQYLFRLQKDIK 143

BLAST of CSPI01G14470 vs. TrEMBL
Match: I3SUF5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-06
Identity = 33/135 (24.44%), Postives = 72/135 (53.33%), Query Frame = 1

Query: 19  QQMIHKFIDALRQQGFLDDDFNNRR-----TAPGHLDSLVT-FCVESEPKLEIIQKSLEG 78
           Q+ + +   A+ ++GFLDD F+  +     T+P  +  +VT F  +SE  L  + ++LE 
Sbjct: 8   QRKLREHETAMFREGFLDDQFSQLQKLQDETSPDFVIEVVTMFFDDSENLLNSMARALEQ 67

Query: 79  EHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYVI 138
             +DF+   +     + ++A VG +RV + C+  +      NL G     ++L  EY ++
Sbjct: 68  VPVDFKQIDAHVHQYKGSSASVGAARVKNLCVPFRNFCETQNLEGCVRCLQQLQHEYSLL 127

Query: 139 RDSFHHMLQAEKTVE 148
           +++F ++ + ++ ++
Sbjct: 128 KNNFQYLFRLQQEIK 142

BLAST of CSPI01G14470 vs. TrEMBL
Match: M0TNH1_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-06
Identity = 31/135 (22.96%), Postives = 70/135 (51.85%), Query Frame = 1

Query: 19  QQMIHKFIDALRQQGFLDDDFNNRR-----TAPGHLDSLVT-FCVESEPKLEIIQKSLEG 78
           ++ ++  ++++  +G LD  F   +     ++PG +  ++T FC ++E  L  + K ++ 
Sbjct: 7   REQLNMLVNSMYIEGLLDQQFQQLQMLQDASSPGFVAEVITLFCEDAERILTELTKLVDQ 66

Query: 79  EHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYVI 138
             ++F+   +    ++ +++ VG   V  ACI  ++    NN +G   A   +   YY++
Sbjct: 67  AVVEFQKVDAYVHQLKGSSSSVGAQNVKLACIQFRQFCEENNKDGCLNALNVVKHHYYLL 126

Query: 139 RDSFHHMLQAEKTVE 148
           R+ F  MLQ E+ ++
Sbjct: 127 RNKFDTMLQLEQRIQ 141

BLAST of CSPI01G14470 vs. TAIR10
Match: AT5G39340.1 (AT5G39340.1 histidine-containing phosphotransmitter 3)

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 31/135 (22.96%), Postives = 64/135 (47.41%), Query Frame = 1

Query: 19  QQMIHKFIDALRQQGFLDDDFNNRRT-----APGHLDSLVT-FCVESEPKLEIIQKSLEG 78
           Q+    F  +L  QGFLDD F   +      +P  +  +VT F  + E  +  + ++L+ 
Sbjct: 9   QRRFCDFTISLYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLISNMARALDQ 68

Query: 79  E-HLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYV 138
             ++DF+   S+   ++ +++ VG  RV   C+ L+E  ++ N  G     +++  EY  
Sbjct: 69  TGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEYKT 128

Query: 139 IRDSFHHMLQAEKTV 147
           ++     +   E+ +
Sbjct: 129 LKAKLQDLFNLEQQI 143

BLAST of CSPI01G14470 vs. NCBI nr
Match: gi|700209813|gb|KGN64909.1| (hypothetical protein Csa_1G153540 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 1.0e-75
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1

Query: 1   MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE 60
           MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE
Sbjct: 1   MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE 120
           PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE
Sbjct: 61  PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLSWEYYVIRDSFHHMLQAEKTVEV 149
           AYKKLSWEYYVIRDSFHHMLQAEKTVEV
Sbjct: 121 AYKKLSWEYYVIRDSFHHMLQAEKTVEV 148

BLAST of CSPI01G14470 vs. NCBI nr
Match: gi|659071740|ref|XP_008461693.1| (PREDICTED: histidine-containing phosphotransfer protein 5-like [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.1e-72
Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 1

Query: 1   MSAAASSSSSHSQPPRSQQQMIHKFIDALRQQGFLDDDFNNRRTAPGHLDSLVTFCVESE 60
           MSAAASSSSSH QPPRSQQQMIHKFIDALRQQGFLD+DFNNRRTAPGHLDSLVTFCVESE
Sbjct: 1   MSAAASSSSSHPQPPRSQQQMIHKFIDALRQQGFLDNDFNNRRTAPGHLDSLVTFCVESE 60

Query: 61  PKLEIIQKSLEGEHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKE 120
           PKLEIIQK+LEGEH+DFRTAI+T+EMIRSAA RVGGSRVASACIALQEHLNNNNLNGSKE
Sbjct: 61  PKLEIIQKALEGEHVDFRTAINTSEMIRSAATRVGGSRVASACIALQEHLNNNNLNGSKE 120

Query: 121 AYKKLSWEYYVIRDSFHHMLQAEKTVEV 149
           AYKKLSWEYYVIRDSFHH+LQAEKTVEV
Sbjct: 121 AYKKLSWEYYVIRDSFHHILQAEKTVEV 148

BLAST of CSPI01G14470 vs. NCBI nr
Match: gi|698531048|ref|XP_009762355.1| (PREDICTED: histidine-containing phosphotransfer protein 1-like [Nicotiana sylvestris])

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-07
Identity = 36/134 (26.87%), Postives = 70/134 (52.24%), Query Frame = 1

Query: 19  QQMIHKFIDALRQQGFLDDDFNNRR-----TAPGHLDSLVT-FCVESEPKLEIIQKSLEG 78
           Q+    FI+AL  +GFLDD F   +     ++P  +  +VT F  +SE  +  +  +L+ 
Sbjct: 8   QKQFIDFINALYHEGFLDDQFLQLQKLQDESSPDFVFEVVTLFFEDSEKIINNLAATLQQ 67

Query: 79  EHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYVI 138
           + +DF+   S     + +++ VG  RV +ACIA +      NL G  +  + +  EY+++
Sbjct: 68  QAVDFKQVDSHVHQFKGSSSSVGAQRVTNACIAFRNFCEQKNLEGCVQCLQHMKHEYFLV 127

Query: 139 RDSFHHMLQAEKTV 147
           ++    +L+ E+ +
Sbjct: 128 KNKLETLLRLEQQI 141

BLAST of CSPI01G14470 vs. NCBI nr
Match: gi|697106705|ref|XP_009607172.1| (PREDICTED: histidine-containing phosphotransfer protein 1-like [Nicotiana tomentosiformis])

HSP 1 Score: 62.4 bits (150), Expect = 7.8e-07
Identity = 36/134 (26.87%), Postives = 68/134 (50.75%), Query Frame = 1

Query: 19  QQMIHKFIDALRQQGFLDDDFNNRR-----TAPGHLDSLVT-FCVESEPKLEIIQKSLEG 78
           Q+    FI AL  +GFLDD F   +     + P  +  +VT F  +SE  +  +  +L+ 
Sbjct: 8   QKQFIDFITALYHEGFLDDQFLQLKKLQDESNPDFVFEVVTLFFEDSEKIINNLAATLQQ 67

Query: 79  EHLDFRTAISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYVI 138
           + +DF+   S     + +++ VG  RV +ACIA +      NL G  +  + +  EY+++
Sbjct: 68  QVVDFKQVDSHVHQFKGSSSSVGAQRVTNACIAFRNFCEQKNLEGCVQCLQHVKHEYFLV 127

Query: 139 RDSFHHMLQAEKTV 147
           ++    +L+ E+ +
Sbjct: 128 KNKLETLLRLEQQI 141

BLAST of CSPI01G14470 vs. NCBI nr
Match: gi|566167419|ref|XP_006384636.1| (hypothetical protein POPTR_0004s19690g [Populus trichocarpa])

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06
Identity = 34/127 (26.77%), Postives = 65/127 (51.18%), Query Frame = 1

Query: 25  FIDALRQQGFLDDDFNNRRTAPGH-----LDSLVTFCVESEPKLEIIQKSLEGEHLDFRT 84
           F+ +L +QG LD  F+     P       +D + TFC ++E  +  + + L    +++  
Sbjct: 13  FVKSLHEQGILDSHFDEILDLPRESPQFVIDLVSTFCSDAENAIAALIRYLNEPDINYSR 72

Query: 85  AISTAEMIRSAAARVGGSRVASACIALQEHLNNNNLNGSKEAYKKLSWEYYVIRDSFHHM 144
            I     IR A++ +GG R+A AC  L+    + + +    A+ K   EY ++++ F+ +
Sbjct: 73  VIDQVHQIRGASSCIGGHRMALACRELRYACEDKDKDRCLAAFGKTKDEYQILKEKFNII 132

Query: 145 LQAEKTV 147
           LQ E+T+
Sbjct: 133 LQMERTM 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LVC3_CUCSA7.2e-76100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G153540 PE=4 SV=1[more]
U5GFZ5_POPTR1.2e-0626.77Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s19690g PE=4 SV=1[more]
V7BJ51_PHAVU1.6e-0627.41Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G167900g PE=4 SV=1[more]
I3SUF5_LOTJA3.5e-0624.44Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
M0TNH1_MUSAM3.5e-0622.96Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G39340.13.1e-0622.96 histidine-containing phosphotransmitter 3[more]
Match NameE-valueIdentityDescription
gi|700209813|gb|KGN64909.1|1.0e-75100.00hypothetical protein Csa_1G153540 [Cucumis sativus][more]
gi|659071740|ref|XP_008461693.1|3.1e-7294.59PREDICTED: histidine-containing phosphotransfer protein 5-like [Cucumis melo][more]
gi|698531048|ref|XP_009762355.1|1.6e-0726.87PREDICTED: histidine-containing phosphotransfer protein 1-like [Nicotiana sylves... [more]
gi|697106705|ref|XP_009607172.1|7.8e-0726.87PREDICTED: histidine-containing phosphotransfer protein 1-like [Nicotiana toment... [more]
gi|566167419|ref|XP_006384636.1|1.7e-0626.77hypothetical protein POPTR_0004s19690g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008207Sig_transdc_His_kin_Hpt_dom
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
Vocabulary: Molecular Function
TermDefinition
GO:0004871signal transducer activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0044424 intracellular part
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0004871 signal transducer activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G14470.1CSPI01G14470.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainGENE3DG3DSA:1.20.120.160coord: 52..140
score: 8.
IPR008207Signal transduction histidine kinase, phosphotransfer (Hpt) domainunknownSSF47226Histidine-containing phosphotransfer domain, HPT domaincoord: 49..145
score: 1.62

The following gene(s) are paralogous to this gene:

None