CSPI01G04670 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G04670
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionSmall nuclear ribonucleoprotein family protein
LocationChr1 : 2917152 .. 2919403 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAACCAAATGGACACCTATGTTAGTGTATGTAAAAGTGTGTATATTTTTTTGATTACAAGAGGTAGAGATTGTTGAGATGCGTTTTTGATTTAGATCCTATTGTTACTCCTCCACGCTCTCTCCATCTCTCTCTCTTTCATCCACGAGAAGCCAAGAATCACAATCGGCTCCCAAGTTCCCCTCTGCTCCGCCGTCCCTGTATGACTCTACTTACTCCCTTTTAATTACCTTACCAAAATGTTTTCCTTTTTCTACTTACTCCATTTCCTTCGATCCTTCACGATTTCCTGCTCATTCTAAACTGATCCTTTCTTTTTCACCCCCCATCCCATTATTGCCTTTCTTTTAGGCCTCACCATGATTTTCTTTTATGTTTTATTACAAATCCAACCTGAATCAGACCACCCTCTTATTGGGCCAATGGTTCAAGGCTATTTTCATATATTAACTTGGACATTTAGGTGTTTTAAGTTTTAGTCGATGCTTTCCATGATACAATACTGTGCTACTCAACTCAATTTACACATGATTCTCAATTATGAAAACAATGGATTAATCTCTGGCACTTCGATGCTGGGTATATGGTTATTAGTTATTAGTTATTATGATTTGTTGTTTTTTGTGTTTCATACTGCATGACCTGCAGGCTTCTTGATGTATTCTTCTAAAACAAGGTCTACTGAAGGTGAAATTTTATTGGATTGATTCAAAACTAGATTGTTGAATCCCATATGTTTGCTATTGAATGTGGATTCTAATTCCTTACCCATAATTGCTTTGAAACCTGCTTCCATATTCACTTTAGTTTTACCTATTTCCTTTAGTGCAAAGGAAATTGTGCTTTCTTTGGCTTTACCATGTCTTTATCGAAACACTCATGCCTAAAAGAGGCACAACTTGCATTAATTAGCCATGTCAAGAGCTTTAGTTCAATTGAGTAGTTCTCTTCTCTTTATTCCTCCACCTTCCCCCTCTCTCTGTACCTTCCACTGGGCCTCCTTCAATACATCCCTGTTGATCATTGTGAGGGACATTCTTTTGCTGCTGTTTTCTTTTAATATAACAACTGTGAGATGGGAATCCAACCTCCGACCTCTAGGATAGAGAAGGTTATGTCAATTGCAATGGAGCTGAGCACACTTTGGCATCTCTGGCAAAGTTGTCATCATTTCCATCCATTATCTATTGCTTGAATTTGCACTTATATATGGTAGTTCCTCATATGGGGATTGTTCTTTTGGTGAACACAGTTCTATGCGTAATTGGGATGCAGCTCTTAAGATCGATGTTTTTTATTATGGAATGTGCAATTAGGACTTGATCTTTCCTTCCATTTGTTTTTCATTCGTTGCTGTTGCTGATGTTATAGAGGCTGCTCCCTTTTTCTTTGAGTGGATTCTCTGTCTCTTGTGTTGAGCATTCATTACTTTTACGGCTTTGATCTTTTTCCTTTGGACAAAATCTTCAATCCAGTTTTTTCCTGCAATTTCAACCCCCTTTTTTCACTCAGATTACGACTTTAGTTGCAATTCTGATAATATTATTGGTTTTGTTCATCAACTACAACTATCTTTCCACATATAGGGATCAGTTGAAGTAACCATAGATGGAACAAGAATCAGGAGGATCCATGGTTCAGGATGGGAGCAATGTTGAGTCTAACCCAGAGAGTTTAGATCACATAGGAAAGGTGAGAAAGCTGCTGTTTCGTCGAATGCTCATAGGTATTAAAGATGGAAGGTTTTTCTTGGGAAACTTTTACTGCATTGACAAGCAAGGAAATATCATCCTTCAAGATGCAGTAGAGTATCGTAGCACTCGGCGGAGCTCACCTTCTCCAATGGAACAACGGTGCCTTGGTCTTATTCTTATACCCAACTCTTGCCGTGTATCCTGTCATGTGGATAGTACCATTGATGAACAATTGGCATTGCTATCAGTTTAGCAAATATAAGATGAAGCCTGAGATTAAGAAGGGATGAAAAAAATGTGCACGCTTCTTTGATGAATTTGACTGTTTATATTGTTACAGAAAAATTCTAAAACATCTTGATGTTTTTAGTGGAAATATGGGATTAGGAAATACGATTTGTTTCTCTTATGGGTAAGATATTGTCGCTTTCTTTATTAAGTTGAAGAGTGGATGCAAAGTAGGAGGAACCTTTGAAAAGATTGTGGAAGAAACCCGGAGGCTTGATAAAGTTATTGTTTTTTAGGGAAAATTATCCCAAGTTTGGAATAACATGTG

mRNA sequence

ATGGAACAAGAATCAGGAGGATCCATGGTTCAGGATGGGAGCAATGTTGAGTCTAACCCAGAGAGTTTAGATCACATAGGAAAGGTGAGAAAGCTGCTGTTTCGTCGAATGCTCATAGGTATTAAAGATGGAAGGTTTTTCTTGGGAAACTTTTACTGCATTGACAAGCAAGGAAATATCATCCTTCAAGATGCAGTAGAGTATCGTAGCACTCGGCGGAGCTCACCTTCTCCAATGGAACAACGGTGCCTTGGTCTTATTCTTATACCCAACTCTTGCCGTGTATCCTGTCATGTGGATAGTACCATTGATGAACAATTGGCATTGCTATCAGTTTAG

Coding sequence (CDS)

ATGGAACAAGAATCAGGAGGATCCATGGTTCAGGATGGGAGCAATGTTGAGTCTAACCCAGAGAGTTTAGATCACATAGGAAAGGTGAGAAAGCTGCTGTTTCGTCGAATGCTCATAGGTATTAAAGATGGAAGGTTTTTCTTGGGAAACTTTTACTGCATTGACAAGCAAGGAAATATCATCCTTCAAGATGCAGTAGAGTATCGTAGCACTCGGCGGAGCTCACCTTCTCCAATGGAACAACGGTGCCTTGGTCTTATTCTTATACCCAACTCTTGCCGTGTATCCTGTCATGTGGATAGTACCATTGATGAACAATTGGCATTGCTATCAGTTTAG
Homology
[Close]
BLAST of CSPI01G04670 vs. Swiss-Prot
Match: RSMB_DICDI (Small nuclear ribonucleoprotein-associated protein B OS=Dictyostelium discoideum GN=snrpb PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 1 

Query: 28  KVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNIILQDAVEYRSTRRSSPSPMEQ-RCLGL 87
           K+ + +  RM + I+DGR  +G F   DK  N+++ DA E+R  R+      E+ R LG+
Sbjct: 9   KMLQYINYRMRVTIQDGRVIVGRFLAFDKHMNVVICDAEEFRRIRQKGKEDREEKRTLGM 68

Query: 88  ILIPNSCRVSCHVDSTIDEQLAL 110
           ILI     VS  V++   E+  L
Sbjct: 69  ILIRGETVVSMSVEAPPPEEAKL 91

[Close]
BLAST of CSPI01G04670 vs. TrEMBL
Match: A0A0A0LSZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025880 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 5.7e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI
Sbjct: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV
Sbjct: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 112

[Close]
BLAST of CSPI01G04670 vs. TrEMBL
Match: A0A061GCV7_THECC (Small nuclear ribonucleoprotein family protein isoform 2 OS=Theobroma cacao GN=TCM_029454 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-40
Identity = 83/112 (74.11%), Postives = 96/112 (85.71%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQE G S++Q GS+ + N  S D + +VRKLLFRRML+GIKDGRFFLG F+CIDKQGNI
Sbjct: 29  MEQEVGESLIQLGSSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNI 88

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQD++EYRSTR SSPSPMEQRCLGLILIP SCR SCHVD +I+EQL+LL V
Sbjct: 89  ILQDSIEYRSTRHSSPSPMEQRCLGLILIPFSCRTSCHVDCSINEQLSLLKV 140

[Close]
BLAST of CSPI01G04670 vs. TrEMBL
Match: A0A061GKU0_THECC (Small nuclear ribonucleoprotein family protein isoform 1 OS=Theobroma cacao GN=TCM_029454 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.3e-40
Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQE G S++Q GS+ + N  S D + +VRKLLFRRML+GIKDGRFFLG F+CIDKQGNI
Sbjct: 1   MEQEVGESLIQLGSSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALL 111
           ILQD++EYRSTR SSPSPMEQRCLGLILIP SCR SCHVD +I+EQL+LL
Sbjct: 61  ILQDSIEYRSTRHSSPSPMEQRCLGLILIPFSCRTSCHVDCSINEQLSLL 110

[Close]
BLAST of CSPI01G04670 vs. TrEMBL
Match: A0A0D2RE93_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G045800 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.2e-40
Identity = 80/112 (71.43%), Postives = 97/112 (86.61%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQE G S++Q G++  SN  S D + +VRKLLFRRML+GIKDGRFFLG F+C+DKQGNI
Sbjct: 1   MEQEVGESLIQLGNSDGSNSSSSDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCLDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQD +EYRSTRRSSPSPMEQRCLGL+LIP+SC+ SCHVD +++EQL+LL V
Sbjct: 61  ILQDTIEYRSTRRSSPSPMEQRCLGLVLIPSSCQNSCHVDCSVEEQLSLLKV 112

[Close]
BLAST of CSPI01G04670 vs. TrEMBL
Match: A0A0D2ULJ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G045800 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.4e-39
Identity = 79/110 (71.82%), Postives = 96/110 (87.27%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQE G S++Q G++  SN  S D + +VRKLLFRRML+GIKDGRFFLG F+C+DKQGNI
Sbjct: 1   MEQEVGESLIQLGNSDGSNSSSSDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCLDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALL 111
           ILQD +EYRSTRRSSPSPMEQRCLGL+LIP+SC+ SCHVD +++EQL+LL
Sbjct: 61  ILQDTIEYRSTRRSSPSPMEQRCLGLVLIPSSCQNSCHVDCSVEEQLSLL 110

[Close]
BLAST of CSPI01G04670 vs. TAIR10
Match: AT4G18372.1 (AT4G18372.1 Small nuclear ribonucleoprotein family protein)

HSP 1 Score: 154.1 bits (388), Expect = 5.3e-38
Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQ +  S     S  E +    D I ++RKLLFR+ML+GIKDGRFFLGNF+CIDKQGNI
Sbjct: 1   MEQAAERSSTIVASTSEGS--DFDPISRLRKLLFRQMLVGIKDGRFFLGNFHCIDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQD VEYRS RRSSPSP EQRCLG+ILIP+SCR SCHVD +IDEQL+L+ +
Sbjct: 61  ILQDTVEYRSIRRSSPSPTEQRCLGMILIPSSCRTSCHVDCSIDEQLSLIQL 110

[Close]
BLAST of CSPI01G04670 vs. NCBI nr
Match: gi|778656582|ref|XP_011649337.1| (PREDICTED: uncharacterized protein LOC101206200 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 8.1e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI
Sbjct: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV
Sbjct: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 112

[Close]
BLAST of CSPI01G04670 vs. NCBI nr
Match: gi|659068447|ref|XP_008444468.1| (PREDICTED: uncharacterized protein LOC103487784 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 4.9e-54
Identity = 109/112 (97.32%), Postives = 109/112 (97.32%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQESGGSMVQDGSN ESN ESLD IGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI
Sbjct: 1   MEQESGGSMVQDGSNFESNSESLDCIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV
Sbjct: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 112

[Close]
BLAST of CSPI01G04670 vs. NCBI nr
Match: gi|590622413|ref|XP_007025043.1| (Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 172.9 bits (437), Expect = 3.1e-40
Identity = 83/112 (74.11%), Postives = 96/112 (85.71%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQE G S++Q GS+ + N  S D + +VRKLLFRRML+GIKDGRFFLG F+CIDKQGNI
Sbjct: 29  MEQEVGESLIQLGSSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNI 88

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQD++EYRSTR SSPSPMEQRCLGLILIP SCR SCHVD +I+EQL+LL V
Sbjct: 89  ILQDSIEYRSTRHSSPSPMEQRCLGLILIPFSCRTSCHVDCSINEQLSLLKV 140

[Close]
BLAST of CSPI01G04670 vs. NCBI nr
Match: gi|590622409|ref|XP_007025042.1| (Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 171.4 bits (433), Expect = 9.0e-40
Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQE G S++Q GS+ + N  S D + +VRKLLFRRML+GIKDGRFFLG F+CIDKQGNI
Sbjct: 1   MEQEVGESLIQLGSSDDPNSSSTDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCIDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALL 111
           ILQD++EYRSTR SSPSPMEQRCLGLILIP SCR SCHVD +I+EQL+LL
Sbjct: 61  ILQDSIEYRSTRHSSPSPMEQRCLGLILIPFSCRTSCHVDCSINEQLSLL 110

[Close]
BLAST of CSPI01G04670 vs. NCBI nr
Match: gi|763801914|gb|KJB68852.1| (hypothetical protein B456_011G045800 [Gossypium raimondii])

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-39
Identity = 80/112 (71.43%), Postives = 97/112 (86.61%), Query Frame = 1 

Query: 1   MEQESGGSMVQDGSNVESNPESLDHIGKVRKLLFRRMLIGIKDGRFFLGNFYCIDKQGNI 60
           MEQE G S++Q G++  SN  S D + +VRKLLFRRML+GIKDGRFFLG F+C+DKQGNI
Sbjct: 1   MEQEVGESLIQLGNSDGSNSSSSDPVTRVRKLLFRRMLVGIKDGRFFLGTFHCLDKQGNI 60

Query: 61  ILQDAVEYRSTRRSSPSPMEQRCLGLILIPNSCRVSCHVDSTIDEQLALLSV 113
           ILQD +EYRSTRRSSPSPMEQRCLGL+LIP+SC+ SCHVD +++EQL+LL V
Sbjct: 61  ILQDTIEYRSTRRSSPSPMEQRCLGLVLIPSSCQNSCHVDCSVEEQLSLLKV 112

The following BLAST results are available for this feature:
BLAST of CSPI01G04670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RSMB_DICDI1.7e-0634.94Small nuclear ribonucleoprotein-associated protein B OS=Dictyostelium discoideum... [more]
BLAST of CSPI01G04670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSZ5_CUCSA5.7e-57100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025880 PE=4 SV=1[more]
A0A061GCV7_THECC2.2e-4074.11Small nuclear ribonucleoprotein family protein isoform 2 OS=Theobroma cacao GN=T... [more]
A0A061GKU0_THECC6.3e-4074.55Small nuclear ribonucleoprotein family protein isoform 1 OS=Theobroma cacao GN=T... [more]
A0A0D2RE93_GOSRA8.2e-4071.43Uncharacterized protein OS=Gossypium raimondii GN=B456_011G045800 PE=4 SV=1[more]
A0A0D2ULJ4_GOSRA2.4e-3971.82Uncharacterized protein OS=Gossypium raimondii GN=B456_011G045800 PE=4 SV=1[more]
BLAST of CSPI01G04670 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18372.15.3e-3867.86 Small nuclear ribonucleoprotein family protein[more]
BLAST of CSPI01G04670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778656582|ref|XP_011649337.1|8.1e-57100.00PREDICTED: uncharacterized protein LOC101206200 [Cucumis sativus][more]
gi|659068447|ref|XP_008444468.1|4.9e-5497.32PREDICTED: uncharacterized protein LOC103487784 [Cucumis melo][more]
gi|590622413|ref|XP_007025043.1|3.1e-4074.11Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma cacao][more]
gi|590622409|ref|XP_007025042.1|9.0e-4074.55Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma cacao][more]
gi|763801914|gb|KJB68852.1|1.2e-3971.43hypothetical protein B456_011G045800 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001163LSM_dom_euk/arc
IPR010920LSM_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0031417 NatC complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G04670.1CSPI01G04670.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001163LSM domain, eukaryotic/archaea-typePFAMPF01423LSMcoord: 30..89
score: 1.
IPR010920LSM domainunknownSSF50182Sm-like ribonucleoproteinscoord: 25..101
score: 1.56
NoneNo IPR availableGENE3DG3DSA:2.30.30.100coord: 25..101
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G04670Cla019570Watermelon (97103) v1cpiwmB031
CSPI01G04670Csa1G025880Cucumber (Chinese Long) v2cpicuB000
CSPI01G04670MELO3C002751Melon (DHL92) v3.5.1cpimeB035
CSPI01G04670ClCG03G006700Watermelon (Charleston Gray)cpiwcgB056
CSPI01G04670Lsi02G009030Bottle gourd (USVL1VR-Ls)cpilsiB029
CSPI01G04670CsaV3_1G004630Cucumber (Chinese Long) v3cpicucB001
CSPI01G04670Cla97C03G057970Watermelon (97103) v2cpiwmbB052
CSPI01G04670Bhi08G001673Wax gourdcpiwgoB065
CSPI01G04670Cucsa.111840Cucumber (Gy14) v1cgycpiB137
CSPI01G04670CsGy1G004550Cucumber (Gy14) v2cgybcpiB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G04670Watermelon (Charleston Gray)cpiwcgB084
CSPI01G04670Watermelon (97103) v1cpiwmB100