Bhi10G000673 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G000673
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	biogenesis of lysosome-related organelles complex 1 subunit 1
Location	chr10 : 17540318 .. 17543422 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAACAAAGCAACCTGGGCGTGAAATGTGAATACAGAATATTTCGCGGGCCGAACATGAATTCTTCGTCGGGGCCGTCACGGCCGGACCTCCCCGTAGCGCCTAATCGCGGCAAGTTTCAATCGGAGACGGAGGGATTGACTGCTGAGGTTGGTGGATTGGAAGCTTCATTACTTCAGATGGTCAATGATCACCATTACGCTTCTCTCAAGCTCAGGGAAAACTCCGGTTAGTTTCTCTCTTTCTCTGTAATTCCTTAACTCTCTCCTACGCCTCCATAGCCTTTAGATGCGGATTACTTTGAAATTTCGTAAAATTAAATCCTAACTCGTCGTTCTGAATCATCGCGATAGAGAAGGCGAAGAAAGATGCGATACAGAAGGCGGTTCGCGTTTCGGATCTTTTATTCGATGCCGTGAATGGTGGAGTTCAGGATTCTTTCGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCTCGATTTACGAAGCAGACCGATCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCTGTTAAGGTTCGCTCTCATTTCGAAAGCAACTATTGTGTTAAAATTTTGTGGAAACCCTACATTTTAGCTGTATGTATGTTTCACTGTTGTTAATCAAAGCCTGCTTAATCTATTTATTGACTGAAGAGTTTAGCATTGTTATTGAAGTCAAAATATTCAGTCTTCCCAAAGTTTTACAACTTTTTAAGTCAATTCAAGGATTTTGAGATGGTTTTCGACCTTGAAGGATTACGTTGGTGCGCTGTCCATAATGATTATGATACTACTTGGTAACCACATTTGATTTTGAGTATAAAAGTTTTTTTCCTTTCTTTTTTTTCCCCCCTAATACTGGTCTAGATGTTGCGCCATGGCTTCCATACTGGCCATCTGTGTCCTATGAAGAGTTTGTGGGCTACTAGACATTGAGTTCTGTTTAAAGTTGGTGTATTGTTAGAGTTGTTTTGTTAGTTATATTCTTAGTTTTGGTTAGACCGTTTCTGTTAGATTCATAACAGTGGTTAGTTATTGAAACGCGGTCGCCAAGCAGCATCTACAAAACCAGTCCCCTGTACCCTTTGTATCAATAGAAATATGAATAAGTGCAGTTCCTGAAACTTAGGTTAGGGCTATTTGGCATCTGTTTTTGGCTAGTCTGCTTCTGCTTCTTAAGCTATTATTCATTTTTTAAATTATGAGTTGGGTATAACAGAAGGCTTAGAGTCCGAGGCAATGAATTCAAGTCATGGTGGCCACTTATCTTGAGTTTAATACCCTACAAGTTTCGTTGGCAACCAAATGTAGTAAAGTTAGCAGTCGTCCTATGAGAATAGTCGAGGTGAATGGAAGCAGTCGAAGCACTTTCATGGATATCAAAAAGAAAAAAGAAAAAAAAAGTTTATTTGATCTTGCAATCCATCCAGCACAACTTTTGGAAACAATTTTGAATACGGAAGAAAAAGGCTATTTATAAAAACAGCTCCCCAGCTATCATTTAGGTTTAGAGGATTTTGTTTTGTGGTTTGATGGTTTGTTTTCAATAACTTGTGCATCACATTGTTGATAGGAGGAAGCAATCAGCTTGGAAAAAATAGTTTTCAAACTTGTACATGTTATGAACATACTTAAGTATTACAAGAGAAAAAGGCCAGCTTACATGTACCTTGAATAATCTCACGGGACAACTTGCCTGACCCTACAACATTTGGATGTCAAAGAAACTCGTGAGAAATCATACTTGACACCAAGTATTATAAAAGAAAAAGATCAGCTTACGCGCACCTCAACTAATCTTACGGGACAACTTGCCTAACCCTACAACATTTGGGCATCAAGGAAACTCATAGGAAATTAATTCCTAGGTATGTGGCCCTATAGATTGAACCCTAGACCTCTTAGCCATCCATTACGACTATGTCTCCATTTTACCACTAGGCCAACCCATGACGTTGTCTTATCCTTTGAGGGTGAAATGTTTATGTATTGTGCACAGGAAGAGAAATAATAAAAAATAGGAATAATCTCTTATTGTTTTGTTGAATGCATATAAAAAATCTCAATTTTGTCACAGGATATTAGAAAGTTTTAGTAGTGCACATTGTCAGCCTTTCGAAAGCAATGAGCAACTTTGTATTTTGGATCCACATGAACCTAAGACCATGTGGATTAGTTTTAATACTTGAATCACTTACTAAGTTGAAGATTTGAACTAAAAGATTCCAGGTGAAAAGGATGGCATGATTATCAATAGTTTTAATGCTTGAATCACTTAATAAGTTTTAGTTGTGCATATCGGTACTTGACTTTAGCCTTTGTAAAACAATGAGCAACGTTGTATTTTGGATCCACATCTTTAATTAATGCTTGAATCACTTAATAAGTTTCCTAGTTGAAGATTTGAACTAAAAGAAACCGGGTGAAGAGGATGGCATGATTATCATAATCTTGAACATGCAAGATAGTAAAAGATGCCTGATTTTCTTTCCTTCATGGTTTCTTCATATTTTGGTTTGGGTTTCTTTCAGGTCTTTCTCATTTGGATTTATTGTTCATACTAATTTGATATGTTTATTTTGTAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTTGATTGTAAAAGCATCACTACGGCCATCCATAACATTTACCAAGACTGAAATGCTTGTATTAAAGAGTCAACCAGAGTGTATTCAGTAGAGTCGAGAAAAACATAGATCCTCCTCATCCCCTGCTTTAAACTGAATCTGTGTCCCCATATGTGGCTTGCTAAATTCTTGTGGTATAAGGTTATGAAGGGTGCAGCATGCCCAGATGGAAACACTTATAGAAACTAAGAACACCTCAGTCACCTGACATGTCTGCTACCTCACTAACTGTATAAAATAATTTGTCGACTCTACTTTTTAAGTTCACTGATTTATTCCTCATTAGCACGGTGAATGTTACCGTTTTGTTCATTTATTGCTCATGTAAACTGCAGTTTTCTTTGTACAACTATTGGCAGCTGCCATGTAATAATAATTTCTACATTCTTTCAATTGTTGGTCCCTATTATACTCTCT

mRNA sequence

AGTAACAAAGCAACCTGGGCGTGAAATGTGAATACAGAATATTTCGCGGGCCGAACATGAATTCTTCGTCGGGGCCGTCACGGCCGGACCTCCCCGTAGCGCCTAATCGCGGCAAGTTTCAATCGGAGACGGAGGGATTGACTGCTGAGGTTGGTGGATTGGAAGCTTCATTACTTCAGATGGTCAATGATCACCATTACGCTTCTCTCAAGCTCAGGGAAAACTCCGAGAAGGCGAAGAAAGATGCGATACAGAAGGCGGTTCGCGTTTCGGATCTTTTATTCGATGCCGTGAATGGTGGAGTTCAGGATTCTTTCGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCTCGATTTACGAAGCAGACCGATCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCTGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTTGATTGTAAAAGCATCACTACGGCCATCCATAACATTTACCAAGACTGAAATGCTTGTATTAAAGAGTCAACCAGAGTGTATTCAGTAGAGTCGAGAAAAACATAGATCCTCCTCATCCCCTGCTTTAAACTGAATCTGTGTCCCCATATGTGGCTTGCTAAATTCTTGTGGTATAAGGTTATGAAGGGTGCAGCATGCCCAGATGGAAACACTTATAGAAACTAAGAACACCTCAGTCACCTGACATGTCTGCTACCTCACTAACTGTATAAAATAATTTGTCGACTCTACTTTTTAAGTTCACTGATTTATTCCTCATTAGCACGGTGAATGTTACCGTTTTGTTCATTTATTGCTCATGTAAACTGCAGTTTTCTTTGTACAACTATTGGCAGCTGCCATGTAATAATAATTTCTACATTCTTTCAATTGTTGGTCCCTATTATACTCTCT

Coding sequence (CDS)

ATGAATTCTTCGTCGGGGCCGTCACGGCCGGACCTCCCCGTAGCGCCTAATCGCGGCAAGTTTCAATCGGAGACGGAGGGATTGACTGCTGAGGTTGGTGGATTGGAAGCTTCATTACTTCAGATGGTCAATGATCACCATTACGCTTCTCTCAAGCTCAGGGAAAACTCCGAGAAGGCGAAGAAAGATGCGATACAGAAGGCGGTTCGCGTTTCGGATCTTTTATTCGATGCCGTGAATGGTGGAGTTCAGGATTCTTTCGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGACTACGATTGCTCGATTTACGAAGCAGACCGATCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCTGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTTGATTGTAAAAGCATCACTACGGCCATCCATAACATTTACCAAGACTGA

Protein sequence

MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

Homology

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BLAST of Bhi10G000673 vs. TAIR10
Match: AT2G30330.1 (GCN5L1 family protein)

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-41
Identity = 86/155 (55.48%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           MN+    S     + P   K +SE E  T     LE+SLLQ+++D+  +SL+LRE +E++
Sbjct: 1   MNTPMSLSAARGRMLPFLEKEKSEEESET-----LESSLLQLIDDNRRSSLQLREKTERS 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           +K+AI+ A R +DLL  AVNGGV++ FVN+K IE EIR LA T+A+F KQTDQWLA THA
Sbjct: 61  RKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           +N+AVKEIGDFENW+KT++FDCK IT AI NI++D
Sbjct: 121 VNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHED 150

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BLAST of Bhi10G000673 vs. Swiss-Prot
Match: sp|O22929|BL1S1_ARATH (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis thaliana OX=3702 GN=BLOS1 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.4e-40
Identity = 86/155 (55.48%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           MN+    S     + P   K +SE E  T     LE+SLLQ+++D+  +SL+LRE +E++
Sbjct: 1   MNTPMSLSAARGRMLPFLEKEKSEEESET-----LESSLLQLIDDNRRSSLQLREKTERS 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           +K+AI+ A R +DLL  AVNGGV++ FVN+K IE EIR LA T+A+F KQTDQWLA THA
Sbjct: 61  RKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           +N+AVKEIGDFENW+KT++FDCK IT AI NI++D
Sbjct: 121 VNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHED 150

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BLAST of Bhi10G000673 vs. Swiss-Prot
Match: sp|Q0VFD8|BL1S1_XENTR (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropicalis OX=8364 GN=bloc1s1 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-19
Identity = 44/116 (37.93%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIR 98
           L +++ +H     + +E  EK +KDAI  A  +++ L D +N GV  ++VNQ+ ++ E++
Sbjct: 2   LSRLLKEHQGKQTERKEAQEKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVK 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ 155
            L T  A+F KQT QW++     N A+KEIGD ENW ++I+ D + I TA+  +Y+
Sbjct: 62  TLQTQAAQFAKQTTQWISLVENFNQALKEIGDVENWARSIEKDMRIIATALEYVYK 117

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BLAST of Bhi10G000673 vs. Swiss-Prot
Match: sp|Q54VX7|BL1S1_DICDI (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium discoideum OX=44689 GN=bloc1s1 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-18
Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIR 98
           L ++V DH     KL+E +E  KK+AI     V++ L D+VN GV   F NQK +E E R
Sbjct: 2   LSKLVKDHQTHQNKLKEENEVLKKEAIASMGVVTNGLIDSVNTGVACIFANQKKLETEAR 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIY 154
            L    A+F+KQT+QW+      N ++KEIGD ENW K I+ D  +I+  I  +Y
Sbjct: 62  LLQANTAKFSKQTNQWIHLIENFNNSLKEIGDVENWSKKIESDMHNISDIIEFLY 116

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BLAST of Bhi10G000673 vs. Swiss-Prot
Match: sp|Q2NKW0|BL1S1_BOVIN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9913 GN=BLOC1S1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 40/116 (34.48%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIR 98
           L +++ +H     + +E  EK +++AI  A  +++ L D +N GV  +++NQ+ ++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ 155
            L    A+F KQT QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

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BLAST of Bhi10G000673 vs. Swiss-Prot
Match: sp|P78537|BL1S1_HUMAN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX=9606 GN=BLOC1S1 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 40/116 (34.48%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIR 98
           L +++ +H     + +E  EK +++AI  A  +++ L D +N GV  +++NQ+ ++ E++
Sbjct: 30  LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQ 155
            L    A+F KQT QW+      N A+KEIGD ENW ++I+ D ++I TA+  +Y+
Sbjct: 90  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145

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BLAST of Bhi10G000673 vs. TrEMBL
Match: tr|A0A1S3CKJ9|A0A1S3CKJ9_CUCME (biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501869 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-71
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           M SS G SRPDLPV PNRGKFQS+TE L+A+VGGLE SLLQMV+DH YASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLL D VNGGVQ+SFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of Bhi10G000673 vs. TrEMBL
Match: tr|A0A0A0KEG1|A0A0A0KEG1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216920 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53
Identity = 115/126 (91.27%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           M SSSG SRPDLPV PNR KFQSETE LTA+VGGLEASLLQMV DH YASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRAL TTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

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BLAST of Bhi10G000673 vs. TrEMBL
Match: tr|A0A067LMV0|A0A067LMV0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17336 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.0e-50
Identity = 101/145 (69.66%), Postives = 122/145 (84.14%), Query Frame = 0


Query: 10  PDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAV 69
           P LP+A  R     + +   AE GGLEASLLQ++ DHH  SL+LR+ +EKAKKDAI+ AV
Sbjct: 4   PQLPLARTRVVSPQDVDKSQAEPGGLEASLLQLMQDHHNTSLRLRDRTEKAKKDAIRNAV 63

Query: 70  RVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIG 129
           RVSDLL DAVNGGVQ+SF+N+K IELEIRALA TI+RF +QTDQWLAATHA+NTA+KEIG
Sbjct: 64  RVSDLLMDAVNGGVQESFINEKRIELEIRALAVTISRFMRQTDQWLAATHAINTAIKEIG 123

Query: 130 DFENWIKTIDFDCKSITTAIHNIYQ 155
           DFENW+KT++FDCKSI+TAI NI+Q
Sbjct: 124 DFENWMKTMEFDCKSISTAIRNIHQ 148

[Close]

BLAST of Bhi10G000673 vs. TrEMBL
Match: tr|A0A2C9U372|A0A2C9U372_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G140300 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 102/145 (70.34%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 10  PDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKAV 69
           P LP+A  RG    ET+    E GGLEASLLQ+V DHH  SL+LRE +EKAKKDAI+KAV
Sbjct: 24  PQLPLARTRGVSPWETDKSQPEPGGLEASLLQLVQDHHNKSLRLRELTEKAKKDAIRKAV 83

Query: 70  RVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIG 129
           RVSDLL DAVNGGVQ+SF+N+K IE EIRALA TI+RF +QTDQWL ATHA+NTA+KEIG
Sbjct: 84  RVSDLLMDAVNGGVQESFINEKRIEHEIRALAATISRFMRQTDQWLTATHAINTAIKEIG 143

Query: 130 DFENWIKTIDFDCKSITTAIHNIYQ 155
           DFENW+K ++FDCKSI  AI NI+Q
Sbjct: 144 DFENWMKIMEFDCKSINAAIRNIHQ 168

[Close]

BLAST of Bhi10G000673 vs. TrEMBL
Match: tr|A0A2I4FAC7|A0A2I4FAC7_9ROSI (biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X2 OS=Juglans regia OX=51240 GN=LOC108996988 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.9e-49
Identity = 101/146 (69.18%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 10  PDLPVAPNRGKF-QSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKAKKDAIQKA 69
           P LP+A  R  +  S +E   A+ GGLEASLLQ ++ HH ASL LRE++E+AKKDAI+ A
Sbjct: 4   PQLPLARTRVPYSSSSSETPNADPGGLEASLLQFIHHHHEASLGLREHTERAKKDAIRNA 63

Query: 70  VRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEI 129
            RVSDLL DAVNGGVQ++FVNQK IELEIRALA TIARF KQTD WL ATHA+NTA+KEI
Sbjct: 64  ARVSDLLVDAVNGGVQEAFVNQKRIELEIRALAATIARFMKQTDHWLTATHAINTAIKEI 123

Query: 130 GDFENWIKTIDFDCKSITTAIHNIYQ 155
           GDFENW+KT++FDCKS++ AIHNI+Q
Sbjct: 124 GDFENWMKTMEFDCKSVSAAIHNIHQ 149

[Close]

BLAST of Bhi10G000673 vs. NCBI nr
Match: XP_011657181.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 2.2e-72
Identity = 144/155 (92.90%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           M SSSG SRPDLPV PNR KFQSETE LTA+VGGLEASLLQMV DH YASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRAL TTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of Bhi10G000673 vs. NCBI nr
Match: XP_008463815.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo])

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71
Identity = 141/155 (90.97%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           M SS G SRPDLPV PNRGKFQS+TE L+A+VGGLE SLLQMV+DH YASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLL D VNGGVQ+SFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of Bhi10G000673 vs. NCBI nr
Match: XP_022948128.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 2.5e-68
Identity = 137/155 (88.39%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           MNS SG SR  LP   NRGKFQSE E L+A+VGGLEASL QMVNDH YASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of Bhi10G000673 vs. NCBI nr
Match: XP_023534753.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 1.2e-67
Identity = 136/155 (87.74%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           MNS SG SR  LP   NRGKFQSE E L+A+VGGLE SL QMVNDH YASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEDSLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLL DAVNGGVQ+SFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

[Close]

BLAST of Bhi10G000673 vs. NCBI nr
Match: XP_023007259.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 2.1e-67
Identity = 136/155 (87.74%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETEGLTAEVGGLEASLLQMVNDHHYASLKLRENSEKA 60
           MNS SG SR   P A NRGKFQSE E L+A+VGGLEASL QMVNDH YASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHHPAARNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLFDAVNGGVQDSFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKA+RVSDLL DAVNGGVQ SFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKALRVSDLLVDAVNGGVQGSFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

The following BLAST results are available for this feature:

BLAST of Bhi10G000673 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30330.1	4.1e-41	55.48	GCN5L1 family protein	[more]

BLAST of Bhi10G000673 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22929\|BL1S1_ARATH	7.4e-40	55.48	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis tha...	[more]
sp\|Q0VFD8\|BL1S1_XENTR	4.2e-19	37.93	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropica...	[more]
sp\|Q54VX7\|BL1S1_DICDI	4.6e-18	42.61	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium d...	[more]
sp\|Q2NKW0\|BL1S1_BOVIN	1.8e-17	34.48	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9...	[more]
sp\|P78537\|BL1S1_HUMAN	1.8e-17	34.48	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX...	[more]

BLAST of Bhi10G000673 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CKJ9\|A0A1S3CKJ9_CUCME	1.2e-71	90.97	biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX...	[more]
tr\|A0A0A0KEG1\|A0A0A0KEG1_CUCSA	1.1e-53	91.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216920 PE=4 SV=1	[more]
tr\|A0A067LMV0\|A0A067LMV0_JATCU	2.0e-50	69.66	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17336 PE=4 SV=1	[more]
tr\|A0A2C9U372\|A0A2C9U372_MANES	1.3e-49	70.34	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G140300 PE=4 SV=...	[more]
tr\|A0A2I4FAC7\|A0A2I4FAC7_9ROSI	4.9e-49	69.18	biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X2 OS=Jugl...	[more]

BLAST of Bhi10G000673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657181.1	2.2e-72	92.90	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumi...	[more]
XP_008463815.1	1.8e-71	90.97	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumi...	[more]
XP_022948128.1	2.5e-68	88.39	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschat...	[more]
XP_023534753.1	1.2e-67	87.74	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo su...	[more]
XP_023007259.1	2.1e-67	87.74	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0031083	BLOC-1 complex

Vocabulary: **INTERPRO**
Term	Definition
IPR009395	BLOC1S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016197	endosomal transport
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0045324	late endosome to vacuole transport
biological_process	GO:0048364	root development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0031083	BLOC-1 complex
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000673	Bhi10M000673	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PFAM	PF06320	GCN5L1	coord: 42..154 e-value: 6.4E-42 score: 142.2
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PANTHER	PTHR13073	GCN5-RELATED	coord: 39..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR13073:SF0	BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 1	coord: 39..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi10G000673	Csa6G216920	Cucumber (Chinese Long) v2	cuwgoB611
Bhi10G000673	MELO3C025682	Melon (DHL92) v3.5.1	mewgoB133
Bhi10G000673	ClCG02G019170	Watermelon (Charleston Gray)	wcgwgoB298
Bhi10G000673	CSPI06G15100	Wild cucumber (PI 183967)	cpiwgoB616
Bhi10G000673	CmaCh02G007080	Cucurbita maxima (Rimu)	cmawgoB0756
Bhi10G000673	CmaCh20G003150	Cucurbita maxima (Rimu)	cmawgoB0692
Bhi10G000673	CmoCh02G007090	Cucurbita moschata (Rifu)	cmowgoB0746
Bhi10G000673	Cp4.1LG05g09980	Cucurbita pepo (Zucchini)	cpewgoB0943
Bhi10G000673	CsGy6G015250	Cucumber (Gy14) v2	cgybwgoB574
Bhi10G000673	MELO3C025682.2	Melon (DHL92) v3.6.1	medwgoB129
Bhi10G000673	Carg11764	Silver-seed gourd	carwgoB1246
Bhi10G000673	CsaV3_6G019000	Cucumber (Chinese Long) v3	cucwgoB622
Bhi10G000673	Cla013406	Watermelon (97103) v1	wgowmB396
Bhi10G000673	Cla97C02G045110	Watermelon (97103) v2	wgowmbB368

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G000673	Cucurbita maxima (Rimu)	cmawgoB0580
Bhi10G000673	Cucumber (Gy14) v2	cgybwgoB469
Bhi10G000673	Cucurbita pepo (Zucchini)	cpewgoB0079
Bhi10G000673	Cucurbita moschata (Rifu)	cmowgoB0575
Bhi10G000673	Cucurbita moschata (Rifu)	cmowgoB0686
Bhi10G000673	Cucurbita moschata (Rifu)	cmowgoB0780
Bhi10G000673	Cucurbita pepo (Zucchini)	cpewgoB0353
Bhi10G000673	Bottle gourd (USVL1VR-Ls)	lsiwgoB068
Bhi10G000673	Melon (DHL92) v3.6.1	medwgoB115
Bhi10G000673	Watermelon (97103) v2	wgowmbB384
Bhi10G000673	Watermelon (97103) v1	wgowmB369
Bhi10G000673	Silver-seed gourd	carwgoB0419