CsGy6G015250 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G015250
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	biogenesis of lysosome-related organelles complex 1 subunit 1
Location	Chr6 : 13818274 .. 13818950 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGTTGATGAACAAATTTGGAATAAAAAGGTAATTTTGCATTAAGAAAGATTTTTGTTATATTTTTTGGACAGATCAACCAACAAATTGAAATAAGAAGATGGGCGTGAAATGTTAATACAGAATATTTCGCGGGGCGAACATGAGATCTTCGTCGGGGCAATCGCGGCCGGACCTCCCGGTAGGGCCTAATCGCGTCAAGTTTCAATCGGAGACGGAGAGATTGACCGCCGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATGGTCACTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAACTCCGGTTAGTTGCTCTCTTTCTCTACTTCCTTAAACTCTCTCTCTTACGTCTCCATACCCTTTACATTCGGATTTTTTTCCAAATTTCTTAAAATTAAATCCTAACTCCTCCTTCTGAATCATTGCAATAGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTACGCGTATCGGATCTTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGGGACTACGATTGCAAGATTTACGAAGCAAACCGATCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCTGTTAAGGTTCGTTCTCATTTGGAGAGCAACTACTGA

mRNA sequence

AGTGTTGATGAACAAATTTGGAATAAAAAGGTAATTTTGCATTAAGAAAGATTTTTGTTATATTTTTTGGACAGATCAACCAACAAATTGAAATAAGAAGATGGGCGTGAAATGTTAATACAGAATATTTCGCGGGGCGAACATGAGATCTTCGTCGGGGCAATCGCGGCCGGACCTCCCGGTAGGGCCTAATCGCGTCAAGTTTCAATCGGAGACGGAGAGATTGACCGCCGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATGGTCACTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTACGCGTATCGGATCTTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGGGACTACGATTGCAAGATTTACGAAGCAAACCGATCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCTGTTAAGGTTCGTTCTCATTTGGAGAGCAACTACTGA

Coding sequence (CDS)

ATGAGATCTTCGTCGGGGCAATCGCGGCCGGACCTCCCGGTAGGGCCTAATCGCGTCAAGTTTCAATCGGAGACGGAGAGATTGACCGCCGATGTAGGTGGATTGGAAGCTTCATTGCTTCAGATGGTCACTGATCATCAGTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAGGCGAAGAAAGATGCTATACAGAAGGCGGTACGCGTATCGGATCTTTTAGTTGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGGGACTACGATTGCAAGATTTACGAAGCAAACCGATCAATGGCTCGCCGCCACTCACGCTTTGAACACTGCTGTTAAGGTTCGTTCTCATTTGGAGAGCAACTACTGA

Protein sequence

MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHALNTAVKVRSHLESNY

Homology

[Close]

BLAST of CsGy6G015250 vs. NCBI nr
Match: KGN47224.1 (hypothetical protein Csa_6G216920 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.7e-60
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60
           MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

[Close]

BLAST of CsGy6G015250 vs. NCBI nr
Match: XP_011657181.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 3.7e-60
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60
           MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

[Close]

BLAST of CsGy6G015250 vs. NCBI nr
Match: XP_008463815.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60
           M+SS GQSRPDLPV PNR KFQS+TERL+ADVGGLE SLLQMV+DHQYASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL TTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

[Close]

BLAST of CsGy6G015250 vs. NCBI nr
Match: XP_022948128.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata])

HSP 1 Score: 206.8 bits (525), Expect = 4.5e-50
Identity = 111/126 (88.10%), Postives = 112/126 (88.89%), Query Frame = 0


Query: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60
           M S SGQSR  LP   NR KFQSE ERL+ADVGGLEASL QMV DHQYASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

[Close]

BLAST of CsGy6G015250 vs. NCBI nr
Match: XP_023534753.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-49
Identity = 110/126 (87.30%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60
           M S SGQSR  LP   NR KFQSE ERL+ADVGGLE SL QMV DHQYASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEDSLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

[Close]

BLAST of CsGy6G015250 vs. TAIR10
Match: AT2G30330.1 (GCN5L1 family protein)

HSP 1 Score: 117.1 bits (292), Expect = 8.5e-27
Identity = 59/103 (57.28%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 24  ETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGV 83
           E E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV
Sbjct: 19  EKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGV 78

Query: 84  QESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHALNTAVK 127
           +E FVN+K IE EIR L  T+A+F KQTDQWLA THA+N+AVK
Sbjct: 79  EECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVK 121

[Close]

BLAST of CsGy6G015250 vs. Swiss-Prot
Match: sp|O22929|BL1S1_ARATH (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis thaliana OX=3702 GN=BLOS1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-25
Identity = 59/103 (57.28%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 24  ETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGV 83
           E E+   +   LE+SLLQ++ D++ +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV
Sbjct: 19  EKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGV 78

Query: 84  QESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHALNTAVK 127
           +E FVN+K IE EIR L  T+A+F KQTDQWLA THA+N+AVK
Sbjct: 79  EECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVK 121

[Close]

BLAST of CsGy6G015250 vs. Swiss-Prot
Match: sp|Q0VFD8|BL1S1_XENTR (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropicalis OX=8364 GN=bloc1s1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.3e-11
Identity = 34/95 (35.79%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 39  LLQMVTDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +HQ    + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++
Sbjct: 2   LSRLLKEHQGKQTERKEAQEKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVK 61

Query: 99  ALGTTIARFTKQTDQWLAATHALNTAVKVRSHLES 134
            L T  A+F KQT QW++     N A+K    +E+
Sbjct: 62  TLQTQAAQFAKQTTQWISLVENFNQALKEIGDVEN 96

[Close]

BLAST of CsGy6G015250 vs. Swiss-Prot
Match: sp|Q54VX7|BL1S1_DICDI (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium discoideum OX=44689 GN=bloc1s1 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-10
Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 39  LLQMVTDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L ++V DHQ    KL+E +E  KK+AI     V++ L+D+VN GV   F NQK +E E R
Sbjct: 2   LSKLVKDHQTHQNKLKEENEVLKKEAIASMGVVTNGLIDSVNTGVACIFANQKKLETEAR 61

Query: 99  ALGTTIARFTKQTDQWLAATHALNTAVKVRSHLES 134
            L    A+F+KQT+QW+      N ++K    +E+
Sbjct: 62  LLQANTAKFSKQTNQWIHLIENFNNSLKEIGDVEN 96

[Close]

BLAST of CsGy6G015250 vs. Swiss-Prot
Match: sp|Q2NKW0|BL1S1_BOVIN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9913 GN=BLOC1S1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 30/95 (31.58%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 39  LLQMVTDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 99  ALGTTIARFTKQTDQWLAATHALNTAVKVRSHLES 134
            L    A+F KQT QW+      N A+K    +E+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVEN 96

[Close]

BLAST of CsGy6G015250 vs. Swiss-Prot
Match: sp|P78537|BL1S1_HUMAN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX=9606 GN=BLOC1S1 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 30/95 (31.58%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 39  LLQMVTDHQYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +HQ    + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++
Sbjct: 30  LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89

Query: 99  ALGTTIARFTKQTDQWLAATHALNTAVKVRSHLES 134
            L    A+F KQT QW+      N A+K    +E+
Sbjct: 90  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVEN 124

[Close]

BLAST of CsGy6G015250 vs. TrEMBL
Match: tr|A0A0A0KEG1|A0A0A0KEG1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216920 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.4e-60
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60
           MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

[Close]

BLAST of CsGy6G015250 vs. TrEMBL
Match: tr|A0A1S3CKJ9|A0A1S3CKJ9_CUCME (biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501869 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-54
Identity = 116/126 (92.06%), Postives = 120/126 (95.24%), Query Frame = 0


Query: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60
           M+SS GQSRPDLPV PNR KFQS+TERL+ADVGGLE SLLQMV+DHQYASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRAL TTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

[Close]

BLAST of CsGy6G015250 vs. TrEMBL
Match: tr|A0A067LMV0|A0A067LMV0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17336 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-34
Identity = 77/117 (65.81%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 10  PDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKAKKDAIQKAV 69
           P LP+   RV    + ++  A+ GGLEASLLQ++ DH   SL+LR+ +EKAKKDAI+ AV
Sbjct: 4   PQLPLARTRVVSPQDVDKSQAEPGGLEASLLQLMQDHHNTSLRLRDRTEKAKKDAIRNAV 63

Query: 70  RVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHALNTAVK 127
           RVSDLL+DAVNGGVQESF+N+K IELEIRAL  TI+RF +QTDQWLAATHA+NTA+K
Sbjct: 64  RVSDLLMDAVNGGVQESFINEKRIELEIRALAVTISRFMRQTDQWLAATHAINTAIK 120

[Close]

BLAST of CsGy6G015250 vs. TrEMBL
Match: tr|A0A2I4FAC7|A0A2I4FAC7_9ROSI (biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X2 OS=Juglans regia OX=51240 GN=LOC108996988 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 81/118 (68.64%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 10  PDLPVGPNRVKF-QSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKAKKDAIQKA 69
           P LP+   RV +  S +E   AD GGLEASLLQ +  H  ASL LRE++E+AKKDAI+ A
Sbjct: 4   PQLPLARTRVPYSSSSSETPNADPGGLEASLLQFIHHHHEASLGLREHTERAKKDAIRNA 63

Query: 70  VRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHALNTAVK 127
            RVSDLLVDAVNGGVQE+FVNQK IELEIRAL  TIARF KQTD WL ATHA+NTA+K
Sbjct: 64  ARVSDLLVDAVNGGVQEAFVNQKRIELEIRALAATIARFMKQTDHWLTATHAINTAIK 121

[Close]

BLAST of CsGy6G015250 vs. TrEMBL
Match: tr|A0A2C9U372|A0A2C9U372_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G140300 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.3e-33
Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 10  PDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKAKKDAIQKAV 69
           P LP+   R     ET++   + GGLEASLLQ+V DH   SL+LRE +EKAKKDAI+KAV
Sbjct: 24  PQLPLARTRGVSPWETDKSQPEPGGLEASLLQLVQDHHNKSLRLRELTEKAKKDAIRKAV 83

Query: 70  RVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHALNTAVK 127
           RVSDLL+DAVNGGVQESF+N+K IE EIRAL  TI+RF +QTDQWL ATHA+NTA+K
Sbjct: 84  RVSDLLMDAVNGGVQESFINEKRIEHEIRALAATISRFMRQTDQWLTATHAINTAIK 140

The following BLAST results are available for this feature:

BLAST of CsGy6G015250 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47224.1	3.7e-60	100.00	hypothetical protein Csa_6G216920 [Cucumis sativus]	[more]
XP_011657181.1	3.7e-60	100.00	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumi...	[more]
XP_008463815.1	1.8e-54	92.06	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumi...	[more]
XP_022948128.1	4.5e-50	88.10	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschat...	[more]
XP_023534753.1	2.2e-49	87.30	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo su...	[more]

BLAST of CsGy6G015250 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30330.1	8.5e-27	57.28	GCN5L1 family protein	[more]

BLAST of CsGy6G015250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22929\|BL1S1_ARATH	1.5e-25	57.28	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis tha...	[more]
sp\|Q0VFD8\|BL1S1_XENTR	6.3e-11	35.79	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropica...	[more]
sp\|Q54VX7\|BL1S1_DICDI	1.8e-10	40.00	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium d...	[more]
sp\|Q2NKW0\|BL1S1_BOVIN	1.3e-08	31.58	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9...	[more]
sp\|P78537\|BL1S1_HUMAN	1.3e-08	31.58	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX...	[more]

BLAST of CsGy6G015250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KEG1\|A0A0A0KEG1_CUCSA	2.4e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216920 PE=4 SV=1	[more]
tr\|A0A1S3CKJ9\|A0A1S3CKJ9_CUCME	1.2e-54	92.06	biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX...	[more]
tr\|A0A067LMV0\|A0A067LMV0_JATCU	1.8e-34	65.81	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17336 PE=4 SV=1	[more]
tr\|A0A2I4FAC7\|A0A2I4FAC7_9ROSI	1.5e-33	68.64	biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X2 OS=Jugl...	[more]
tr\|A0A2C9U372\|A0A2C9U372_MANES	3.3e-33	66.67	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G140300 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0031083	BLOC-1 complex

Vocabulary: **INTERPRO**
Term	Definition
IPR009395	BLOC1S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016197	endosomal transport
cellular_component	GO:0031083	BLOC-1 complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G015250.1	CsGy6G015250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PFAM	PF06320	GCN5L1	coord: 42..126 e-value: 6.7E-26 score: 90.6
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PANTHER	PTHR13073	GCN5-RELATED	coord: 39..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G015250	Cla013406	Watermelon (97103) v1	cgybwmB492
CsGy6G015250	Csa6G216920	Cucumber (Chinese Long) v2	cgybcuB287
CsGy6G015250	MELO3C025682	Melon (DHL92) v3.5.1	cgybmeB390
CsGy6G015250	ClCG02G019170	Watermelon (Charleston Gray)	cgybwcgB417
CsGy6G015250	CSPI06G15100	Wild cucumber (PI 183967)	cgybcpiB293
CsGy6G015250	CmaCh20G003150	Cucurbita maxima (Rimu)	cgybcmaB805
CsGy6G015250	MELO3C025682.2	Melon (DHL92) v3.6.1	cgybmedB392
CsGy6G015250	CsaV3_6G019000	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G015250	Cla97C02G045110	Watermelon (97103) v2	cgybwmbB424
CsGy6G015250	Bhi10G000673	Wax gourd	cgybwgoB574

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G015250	Cucurbita moschata (Rifu)	cgybcmoB785
CsGy6G015250	Cucurbita pepo (Zucchini)	cgybcpeB764
CsGy6G015250	Bottle gourd (USVL1VR-Ls)	cgyblsiB375