Cla97C02G045110 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G045110
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	biogenesis of lysosome-related organelles complex 1 subunit 1
Location	Cla97Chr02 : 33223289 .. 33226212 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGGTTAGTTGCAAGTTCCTCGCTCTCTTTCTCTGTTCTTCTGTAATTCCTAACTCTCTCTTATGCCTCCATAGCCTTTAGATGCTGATTGTTTTCAAATTTCGTAAAATTATATCCTAACTTGTCCTTCTGAATCATTGCGATAGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGTTTGCTCTCACTTCGAAAGCAACTACTGAGTTAAAATTTCATGGAAACCCAACATTTTAGTTGTATATCTGAATATGTAAATTCGGCACTGTTGCTTATCAAAGCCTGCTTAATCTTATTACTGACTGAAGGGTTTAGCATTGTTATTGAAGTCCACAAATTCAGTCTTCCAAAAGTTGAGATGGTATTTGAGCTTGAAGGATTACATTGGGGTCCTTTCGATAATGGTTATGATACTGCCTCGTAACCACATTTGATTTTGGGTCTGATTTTTTTCCCCCTCTAACAGCGGTCTAAATGTTGCGCCATGGCTTCCATACTGGCCATATGTGTCCTATGAAGAGTTTGTGGGCTATTAGACATTGATTTGTTGTGTTTATAGTTGGTGTATTGTTAGAACTGTTTTGTTGTTTATATTCTTAGTTTTGATTAAAAGCTTTGTCTGTTAGATTCATAGCAGTGGTTGGTTATTGAAATTCAGTGGCCAAGCAGTATCTACAGTAACAAAACCACCCACTGTACTCATTGTATCAATAAAAATATGAATAGAACTATTGAAATGCACTAGTTTTTTATCTATGAGTGTCAGGACCAGCTTACGCACCTCGACTAATCTCACGGGTTCTCACTAGACAACCTGCCTGACCCTACAACATTTGGGTAGCAAGGAAACTCGTAAGATATTAAATCCTAGATAGGTGGCCACCATAGATTGAACCCATGACCTCTTAGCATTTATTAGGACTATGTCTCCTTTTTTAGCACTAGGCCAATCCATGATGGTTTATAGAAAAGTGGTTCTTGAAACTTAGATTAGGGCTATCTTGAATCTGTGTTTTGTTTGTCTGCTTCTTAAGACAACTTAAGCTATTATTCATTTTAAAATTATGAGTTGGGTATAACAAAGGGCTTAGAGAGAATGAATTCAAGCCCAAGATTGCCAATGATCTAGGATTTAATACCTTATGAGTTCTGTTTGCAACCAAATGTAGTAAAGTCAGATGGTTGTTTCATGAGAATAGTTTAAGTGCACAGAACTTAGTCGGGGACACTAATGGATGTCAAAAAGAAAAAAGAAAAAGGTTTCTTTGGCCTTGCAAAATTGCAATCCATACAGCACAACTTTTTGTAAACAGTTTTGAACAAGGAGAAAAAGGCTATTTTAAAAAACAGCTCCCCAGCCATCATTTAGGTTTAGAATATTTTGTTTTGTGGTTTGATGGTTTGCTTTCAGTGACTTGTGCTTGTGCATACATTGTGTTGATAGAAGGAGGAAGCTATCGACTTGGAGAAAATACTTCTCAAACTCGTACATATTATGAACATACAGCTATCATTAAATACTTTTTAAGGGTTTGGCCTCGAGATATTCGGGAGGCGATTGAGGAGTTCCTTCTCCATTTGCCCTTCAAGGAGAAAGGCCGGTTTTTATGGAGAGCTAGGGTGTGCTATTTTGCAGGCTTGTTTTTTGTGGCCCTTGTATGTTTTCATTTTTTCTCAATGAAAGTAGTTGTTTCAATAAAAAGAAAATGAACACACTAAAGACTGCAAAAGTCGAAAATAAAACTGAAGTTCAACTTCCATCTTTGTGATCACTAAATAAACATTTCTATTCATGGAGTCTTTGATGTTGTCTCATCCTTCGAGGGTGAAATGAATATGTACAGTACACTGGGAAAGATATAATCCCTCTCTCTTTCCTTTTTTTTTTTTTTTAAAGAAAAAGATGATAGAAATAATCTCTTAGAGGGCACGAGCGAAGAGTGGAGTTGTAAAGTATAGTTGTTAAGTTTGGAAAGTTGTTTTGTTGTCATGCCTATAACGTAAAAAGTTAACAAGTCATGAATGTTCTGCCCACAATGAGTTTAAGAATTTCTTGGGGCAAACAAGGAGTCTTCCCCAACTCCTACTCCTTGGGCCAAACATGCCCTTATTGTTTTGTTGGATACATATAAAGAATCTCAATTTTGTCACAAGATTTTAGACAGTTTTAATCGTGCTTATGCACATTGTTACTTGACCTTAGCCTTTGTAAAACAATGAGCAACTTTGCATTTTGGATCCACATGAACCTAAGTCTGTGTGATGAGTTATAATGCTTGAATCACTCAATAAGTTTCTTAGTTGAAGATTTGAACTAGAAGAAACCAGGTGAAAAGGATGGCATGATTATCATCATCTTGAAAAAGCAAGATAGGAAAGGTTGCCTGATCTTCTTTCCTTCATGGTTTCGTCATATTTTCCTGGGACTCTTTCAGAACTTTTTCATTCTGATATGTTATTCATACTAATTTGATGTGTTTATTTCGTAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCAAAACATTTATCAAGACTGA

mRNA sequence

ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCAAAACATTTATCAAGACTGA

Coding sequence (CDS)

ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGACTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTTTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAGACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCAAAACATTTATCAAGACTGA

Protein sequence

MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD

Homology

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BLAST of Cla97C02G045110 vs. NCBI nr
Match: XP_008463815.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 4.8e-72
Identity = 144/155 (92.90%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKA 60
           M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

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BLAST of Cla97C02G045110 vs. NCBI nr
Match: XP_011657181.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 4.8e-72
Identity = 144/155 (92.90%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKA 60
           M SSSG SRPDLPV PNR KFQSETERL++DVGGLE SLLQMV DH YASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL TTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

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BLAST of Cla97C02G045110 vs. NCBI nr
Match: XP_022948128.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 8.5e-69
Identity = 139/155 (89.68%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKA 60
           MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

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BLAST of Cla97C02G045110 vs. NCBI nr
Match: XP_023534753.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 139/155 (89.68%), Postives = 141/155 (90.97%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKA 60
           MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHLPAPRNRGKFQSEAERLSADVGGLEDSLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

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BLAST of Cla97C02G045110 vs. NCBI nr
Match: XP_023007259.1 (biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 2.1e-67
Identity = 137/155 (88.39%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKA 60
           MNS SG SR   P A NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKA
Sbjct: 1   MNSPSGQSRQHHPAARNRGKFQSEAERLSADVGGLEASLFQMVNDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKA+RVSDLLVDAVNGGVQ SFVNQKLIELEIRAL+TTI RF KQTDQWLAATHA
Sbjct: 61  KKDAIQKALRVSDLLVDAVNGGVQGSFVNQKLIELEIRALSTTITRFMKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

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BLAST of Cla97C02G045110 vs. TrEMBL
Match: tr|A0A1S3CKJ9|A0A1S3CKJ9_CUCME (biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501869 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.2e-72
Identity = 144/155 (92.90%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKA 60
           M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKA
Sbjct: 1   MKSSLGQSRPDLPVPPNRGKFQSDTERLSADVGGLEVSLLQMVSDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVD VNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDTVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQD 156
           LNTAVKEIGDFENWIKTIDFDCKSITTAI NIYQD
Sbjct: 121 LNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD 155

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BLAST of Cla97C02G045110 vs. TrEMBL
Match: tr|A0A0A0KEG1|A0A0A0KEG1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216920 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-54
Identity = 116/126 (92.06%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKA 60
           M SSSG SRPDLPV PNR KFQSETERL++DVGGLE SLLQMV DH YASLKLRENSEKA
Sbjct: 1   MRSSSGQSRPDLPVGPNRVKFQSETERLTADVGGLEASLLQMVTDHQYASLKLRENSEKA 60

Query: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHA 120
           KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRAL TTIARFTKQTDQWLAATHA
Sbjct: 61  KKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIRALGTTIARFTKQTDQWLAATHA 120

Query: 121 LNTAVK 127
           LNTAVK
Sbjct: 121 LNTAVK 126

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BLAST of Cla97C02G045110 vs. TrEMBL
Match: tr|A0A067LMV0|A0A067LMV0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17336 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.5e-50
Identity = 99/145 (68.28%), Postives = 124/145 (85.52%), Query Frame = 0


Query: 10  PDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAV 69
           P LP+A  R     + ++  ++ GGLE SLLQ++ DHH  SL+LR+ +EKAKKDAI+ AV
Sbjct: 4   PQLPLARTRVVSPQDVDKSQAEPGGLEASLLQLMQDHHNTSLRLRDRTEKAKKDAIRNAV 63

Query: 70  RVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIG 129
           RVSDLL+DAVNGGVQESF+N+K IELEIRALA TI+RF +QTDQWLAATHA+NTA+KEIG
Sbjct: 64  RVSDLLMDAVNGGVQESFINEKRIELEIRALAVTISRFMRQTDQWLAATHAINTAIKEIG 123

Query: 130 DFENWIKTIDFDCKSITTAIQNIYQ 155
           DFENW+KT++FDCKSI+TAI+NI+Q
Sbjct: 124 DFENWMKTMEFDCKSISTAIRNIHQ 148

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BLAST of Cla97C02G045110 vs. TrEMBL
Match: tr|A0A2C9U372|A0A2C9U372_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G140300 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-49
Identity = 101/145 (69.66%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 10  PDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAV 69
           P LP+A  RG    ET++   + GGLE SLLQ+V DHH  SL+LRE +EKAKKDAI+KAV
Sbjct: 24  PQLPLARTRGVSPWETDKSQPEPGGLEASLLQLVQDHHNKSLRLRELTEKAKKDAIRKAV 83

Query: 70  RVSDLLVDAVNGGVQESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIG 129
           RVSDLL+DAVNGGVQESF+N+K IE EIRALA TI+RF +QTDQWL ATHA+NTA+KEIG
Sbjct: 84  RVSDLLMDAVNGGVQESFINEKRIEHEIRALAATISRFMRQTDQWLTATHAINTAIKEIG 143

Query: 130 DFENWIKTIDFDCKSITTAIQNIYQ 155
           DFENW+K ++FDCKSI  AI+NI+Q
Sbjct: 144 DFENWMKIMEFDCKSINAAIRNIHQ 168

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BLAST of Cla97C02G045110 vs. TrEMBL
Match: tr|A0A2N9G5H5|A0A2N9G5H5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25799 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 96/124 (77.42%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 31  DVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQ 90
           D GGLE SLL ++NDHH+ASLKLR+ +E+AKKDAI+ A RVSDLLVDAVNGGVQESF+N+
Sbjct: 28  DPGGLEASLLHIINDHHHASLKLRDQAERAKKDAIRNAARVSDLLVDAVNGGVQESFINE 87

Query: 91  KLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQ 150
           K IELEIRALA TIARF KQTDQWL ATHA+N+A+KEIGDFENW+KT++FDCKSI+ AIQ
Sbjct: 88  KRIELEIRALAVTIARFMKQTDQWLTATHAINSAIKEIGDFENWMKTMEFDCKSISAAIQ 147

Query: 151 NIYQ 155
           NI+Q
Sbjct: 148 NIHQ 151

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BLAST of Cla97C02G045110 vs. Swiss-Prot
Match: sp|O22929|BL1S1_ARATH (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis thaliana OX=3702 GN=BLOS1 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.0e-41
Identity = 81/132 (61.36%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 24  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGV 83
           E E+   +   LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV
Sbjct: 19  EKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGV 78

Query: 84  QESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCK 143
           +E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK
Sbjct: 79  EECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCK 138

Query: 144 SITTAIQNIYQD 156
            IT AI+NI++D
Sbjct: 139 KITAAIRNIHED 150

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BLAST of Cla97C02G045110 vs. Swiss-Prot
Match: sp|Q0VFD8|BL1S1_XENTR (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropicalis OX=8364 GN=bloc1s1 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.5e-20
Identity = 45/116 (38.79%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +H     + +E  EK +KDAI  A  +++ LVD +N GV +++VNQ+ ++ E++
Sbjct: 2   LSRLLKEHQGKQTERKEAQEKRRKDAIAAATTLTEALVDHLNVGVAQAYVNQRKLDHEVK 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQ 155
            L T  A+F KQT QW++     N A+KEIGD ENW ++I+ D + I TA++ +Y+
Sbjct: 62  TLQTQAAQFAKQTTQWISLVENFNQALKEIGDVENWARSIEKDMRIIATALEYVYK 117

[Close]

BLAST of Cla97C02G045110 vs. Swiss-Prot
Match: sp|Q2NKW0|BL1S1_BOVIN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9913 GN=BLOC1S1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 41/116 (35.34%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +H     + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++
Sbjct: 2   LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQ 155
            L    A+F KQT QW+      N A+KEIGD ENW ++I+ D ++I TA++ +Y+
Sbjct: 62  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 117

[Close]

BLAST of Cla97C02G045110 vs. Swiss-Prot
Match: sp|Q54VX7|BL1S1_DICDI (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium discoideum OX=44689 GN=bloc1s1 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L ++V DH     KL+E +E  KK+AI     V++ L+D+VN GV   F NQK +E E R
Sbjct: 2   LSKLVKDHQTHQNKLKEENEVLKKEAIASMGVVTNGLIDSVNTGVACIFANQKKLETEAR 61

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIY 154
            L    A+F+KQT+QW+      N ++KEIGD ENW K I+ D  +I+  I+ +Y
Sbjct: 62  LLQANTAKFSKQTNQWIHLIENFNNSLKEIGDVENWSKKIESDMHNISDIIEFLY 116

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BLAST of Cla97C02G045110 vs. Swiss-Prot
Match: sp|P78537|BL1S1_HUMAN (Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX=9606 GN=BLOC1S1 PE=1 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-18
Identity = 41/116 (35.34%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 39  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGVQESFVNQKLIELEIR 98
           L +++ +H     + +E  EK +++AI  A  +++ LVD +N GV ++++NQ+ ++ E++
Sbjct: 30  LSRLLKEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVK 89

Query: 99  ALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIQNIYQ 155
            L    A+F KQT QW+      N A+KEIGD ENW ++I+ D ++I TA++ +Y+
Sbjct: 90  TLQVQAAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATALEYVYK 145

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BLAST of Cla97C02G045110 vs. TAIR10
Match: AT2G30330.1 (GCN5L1 family protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.7e-42
Identity = 81/132 (61.36%), Postives = 108/132 (81.82%), Query Frame = 0


Query: 24  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLLVDAVNGGV 83
           E E+   +   LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DLLV AVNGGV
Sbjct: 19  EKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGV 78

Query: 84  QESFVNQKLIELEIRALATTIARFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFDCK 143
           +E FVN+K IE EIR LA T+A+F KQTDQWLA THA+N+AVKEIGDFENW+KT++FDCK
Sbjct: 79  EECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCK 138

Query: 144 SITTAIQNIYQD 156
            IT AI+NI++D
Sbjct: 139 KITAAIRNIHED 150

The following BLAST results are available for this feature:

BLAST of Cla97C02G045110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463815.1	4.8e-72	92.90	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumi...	[more]
XP_011657181.1	4.8e-72	92.90	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumi...	[more]
XP_022948128.1	8.5e-69	89.68	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschat...	[more]
XP_023534753.1	1.1e-68	89.68	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo su...	[more]
XP_023007259.1	2.1e-67	88.39	biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita maxima]	[more]

BLAST of Cla97C02G045110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CKJ9\|A0A1S3CKJ9_CUCME	3.2e-72	92.90	biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Cucumis melo OX...	[more]
tr\|A0A0A0KEG1\|A0A0A0KEG1_CUCSA	3.0e-54	92.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216920 PE=4 SV=1	[more]
tr\|A0A067LMV0\|A0A067LMV0_JATCU	4.5e-50	68.28	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17336 PE=4 SV=1	[more]
tr\|A0A2C9U372\|A0A2C9U372_MANES	1.3e-49	69.66	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G140300 PE=4 SV=...	[more]
tr\|A0A2N9G5H5\|A0A2N9G5H5_FAGSY	1.1e-48	77.42	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25799 PE=4 SV=1	[more]

BLAST of Cla97C02G045110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22929\|BL1S1_ARATH	3.0e-41	61.36	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Arabidopsis tha...	[more]
sp\|Q0VFD8\|BL1S1_XENTR	6.5e-20	38.79	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Xenopus tropica...	[more]
sp\|Q2NKW0\|BL1S1_BOVIN	2.7e-18	35.34	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Bos taurus OX=9...	[more]
sp\|Q54VX7\|BL1S1_DICDI	2.7e-18	42.61	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Dictyostelium d...	[more]
sp\|P78537\|BL1S1_HUMAN	2.7e-18	35.34	Biogenesis of lysosome-related organelles complex 1 subunit 1 OS=Homo sapiens OX...	[more]

BLAST of Cla97C02G045110 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30330.1	1.7e-42	61.36	GCN5L1 family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0031083	BLOC-1 complex

Vocabulary: **INTERPRO**
Term	Definition
IPR009395	BLOC1S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016197	endosomal transport
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0045324	late endosome to vacuole transport
biological_process	GO:0048364	root development
biological_process	GO:0008150	biological_process
cellular_component	GO:0031083	BLOC-1 complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G045110.1	Cla97C02G045110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PFAM	PF06320	GCN5L1	coord: 42..154 e-value: 9.3E-43 score: 144.9
IPR009395	Biogenesis of lysosome-related organelles complex 1 subunit 1	PANTHER	PTHR13073	GCN5-RELATED	coord: 39..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR13073:SF0	BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 1	coord: 39..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G045110	Csa6G216920	Cucumber (Chinese Long) v2	cuwmbB436
Cla97C02G045110	CSPI06G15100	Wild cucumber (PI 183967)	cpiwmbB460
Cla97C02G045110	CmaCh02G007080	Cucurbita maxima (Rimu)	cmawmbB614
Cla97C02G045110	CmaCh20G003150	Cucurbita maxima (Rimu)	cmawmbB568
Cla97C02G045110	CmoCh02G007090	Cucurbita moschata (Rifu)	cmowmbB588
Cla97C02G045110	CsGy6G015250	Cucumber (Gy14) v2	cgybwmbB424
Cla97C02G045110	MELO3C025682.2	Melon (DHL92) v3.6.1	medwmbB086
Cla97C02G045110	Carg11764	Silver-seed gourd	carwmbB1114
Cla97C02G045110	CsaV3_6G019000	Cucumber (Chinese Long) v3	cucwmbB463
Cla97C02G045110	Bhi10G000673	Wax gourd	wgowmbB368

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G045110	Watermelon (97103) v2	wmbwmbB107
Cla97C02G045110	Silver-seed gourd	carwmbB0346
Cla97C02G045110	Silver-seed gourd	carwmbB0544
Cla97C02G045110	Cucurbita maxima (Rimu)	cmawmbB461
Cla97C02G045110	Cucurbita moschata (Rifu)	cmowmbB651
Cla97C02G045110	Cucurbita moschata (Rifu)	cmowmbB443
Cla97C02G045110	Cucurbita moschata (Rifu)	cmowmbB545
Cla97C02G045110	Bottle gourd (USVL1VR-Ls)	lsiwmbB052
Cla97C02G045110	Melon (DHL92) v3.6.1	medwmbB102
Cla97C02G045110	Melon (DHL92) v3.5.1	mewmbB099
Cla97C02G045110	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G045110	Watermelon (97103) v1	wmwmbB316