Bhi08G000521 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000521
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	RING finger family protein
Location	chr8 : 20000425 .. 20000916 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCTCCAATTTTTTCACAGTCCCTTTCGCAGTTGCCGCCGCTGCTACTGCCGCCGCGGCGGTCACTGTATGTACTTCCTCAATATGGTGAGGATTTGGCTACAGTCTTCATGTTTCTCCTCTTCATACTATTTTTCTTCCTTGCCAGTTTTTGTAGCAAAAGAGCCGCCAGAGCGTTGCCGGAGAATTTGGAGATTCAAGCATCGACTTTCAGTTACGATAAAGAAGAAGACGACGACGAAAAAGAATGTGTGATTTGCCTTTATAAAATTGAAGAAGGAGATAAGTGTAGAAGGATGAATACATGCGGTCACGTGTTTCATAAAGACTGCATTGACCAGTGGTTTACAGTGGAGCGCCACTGTCCACTTTGCCGGACCTCCGTTTGTGTGGTTGTTGATCGCCATGAAAATACCACGCCTTCTTCTTCTTCATCTTCTCCAATCCCTTTTGAACCGATTAATCTCGACGAATTTCTTAGGACATAA

mRNA sequence

ATGTCGTCTCCAATTTTTTCACAGTCCCTTTCGCAGTTGCCGCCGCTGCTACTGCCGCCGCGGCGGTCACTGTATGTACTTCCTCAATATGGTGAGGATTTGGCTACAGTCTTCATGTTTCTCCTCTTCATACTATTTTTCTTCCTTGCCAGTTTTTGTAGCAAAAGAGCCGCCAGAGCGTTGCCGGAGAATTTGGAGATTCAAGCATCGACTTTCAGTTACGATAAAGAAGAAGACGACGACGAAAAAGAATGTGTGATTTGCCTTTATAAAATTGAAGAAGGAGATAAGTGTAGAAGGATGAATACATGCGGTCACGTGTTTCATAAAGACTGCATTGACCAGTGGTTTACAGTGGAGCGCCACTGTCCACTTTGCCGGACCTCCGTTTGTGTGGTTGTTGATCGCCATGAAAATACCACGCCTTCTTCTTCTTCATCTTCTCCAATCCCTTTTGAACCGATTAATCTCGACGAATTTCTTAGGACATAA

Coding sequence (CDS)

ATGTCGTCTCCAATTTTTTCACAGTCCCTTTCGCAGTTGCCGCCGCTGCTACTGCCGCCGCGGCGGTCACTGTATGTACTTCCTCAATATGGTGAGGATTTGGCTACAGTCTTCATGTTTCTCCTCTTCATACTATTTTTCTTCCTTGCCAGTTTTTGTAGCAAAAGAGCCGCCAGAGCGTTGCCGGAGAATTTGGAGATTCAAGCATCGACTTTCAGTTACGATAAAGAAGAAGACGACGACGAAAAAGAATGTGTGATTTGCCTTTATAAAATTGAAGAAGGAGATAAGTGTAGAAGGATGAATACATGCGGTCACGTGTTTCATAAAGACTGCATTGACCAGTGGTTTACAGTGGAGCGCCACTGTCCACTTTGCCGGACCTCCGTTTGTGTGGTTGTTGATCGCCATGAAAATACCACGCCTTCTTCTTCTTCATCTTCTCCAATCCCTTTTGAACCGATTAATCTCGACGAATTTCTTAGGACATAA

Protein sequence

MSSPIFSQSLSQLPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARALPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRTSVCVVVDRHENTTPSSSSSSPIPFEPINLDEFLRT

Homology

[Close]

BLAST of Bhi08G000521 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 38/80 (47.50%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 85  CVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRTSVCVVVDRHENTTPSS 144
           C +CL + EE D+ R +  CGH FH DCID WF     CPLCR  V       E  T SS
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIE--TGSS 167

Query: 145 SSSSPIPF-------EPINL 158
           SSSSP+ F       EPI+L
Sbjct: 168 SSSSPLTFPTEGCEREPIDL 185

[Close]

BLAST of Bhi08G000521 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10
Identity = 30/74 (40.54%), Postives = 39/74 (52.70%), Query Frame = 0


Query: 57  AARALPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 116
           A+R L  N+      F++  E   D  EC +CL + EE +  R +  C H FH DCID W
Sbjct: 91  ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150

Query: 117 FTVERHCPLCRTSV 131
           F     CPLCR+ V
Sbjct: 151 FHSHSTCPLCRSLV 164

[Close]

BLAST of Bhi08G000521 vs. Swiss-Prot
Match: sp|Q9P7E1|YOF7_SCHPO (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-10
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 82  EKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERH-CPLCRTSVCVVVDRHENT 141
           ++ C++CL   E  D+CRR+  C H FH++CIDQW T  ++ CPLCRT         +  
Sbjct: 522 DERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT---------KGV 581

Query: 142 TPSSSSSSPIP 152
             +S+ SSP P
Sbjct: 582 ASASTPSSPKP 583

[Close]

BLAST of Bhi08G000521 vs. Swiss-Prot
Match: sp|P93823|ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.3e-10
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 57  AARALPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 116
           A RA+P     +    + ++++  + +EC +CL + +E +K R +  C HVFH DCID W
Sbjct: 106 AIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIW 165

Query: 117 FTVERHCPLCRTSV 131
                +CPLCRTSV
Sbjct: 166 LQGNANCPLCRTSV 179

[Close]

BLAST of Bhi08G000521 vs. Swiss-Prot
Match: sp|P0C035|ATL60_ARATH (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 31/69 (44.93%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 81  DEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRTSVCVVVDRHENT 140
           D  EC +CL  + +GDK R +  C H FH DCID WF     CPLCR +V  V    E+T
Sbjct: 116 DGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSV----EDT 175

Query: 141 TPSSSSSSP 150
           T   S   P
Sbjct: 176 THGGSEGLP 180

[Close]

BLAST of Bhi08G000521 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 7.1e-12
Identity = 38/80 (47.50%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 85  CVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRTSVCVVVDRHENTTPSS 144
           C +CL + EE D+ R +  CGH FH DCID WF     CPLCR  V       E  T SS
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIE--TGSS 167

Query: 145 SSSSPIPF-------EPINL 158
           SSSSP+ F       EPI+L
Sbjct: 168 SSSSPLTFPTEGCEREPIDL 185

[Close]

BLAST of Bhi08G000521 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 30/74 (40.54%), Postives = 39/74 (52.70%), Query Frame = 0


Query: 57  AARALPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 116
           A+R L  N+      F++  E   D  EC +CL + EE +  R +  C H FH DCID W
Sbjct: 91  ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150

Query: 117 FTVERHCPLCRTSV 131
           F     CPLCR+ V
Sbjct: 151 FHSHSTCPLCRSLV 164

[Close]

BLAST of Bhi08G000521 vs. TAIR10
Match: AT1G04360.1 (RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 4.6e-11
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 57  AARALPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 116
           A RA+P     +    + ++++  + +EC +CL + +E +K R +  C HVFH DCID W
Sbjct: 106 AIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIW 165

Query: 117 FTVERHCPLCRTSV 131
                +CPLCRTSV
Sbjct: 166 LQGNANCPLCRTSV 179

[Close]

BLAST of Bhi08G000521 vs. TAIR10
Match: AT1G53820.1 (RING/U-box superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 7.9e-11
Identity = 31/69 (44.93%), Postives = 37/69 (53.62%), Query Frame = 0


Query: 81  DEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRTSVCVVVDRHENT 140
           D  EC +CL  + +GDK R +  C H FH DCID WF     CPLCR +V  V    E+T
Sbjct: 116 DGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSV----EDT 175

Query: 141 TPSSSSSSP 150
           T   S   P
Sbjct: 176 THGGSEGLP 180

[Close]

BLAST of Bhi08G000521 vs. TAIR10
Match: AT3G14320.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 84  ECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRTSVCVVVDR 137
           ECV+CL ++ +GDK R + +C H FH +CID W      CP+CR  VC+   R
Sbjct: 87  ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSR 139

[Close]

BLAST of Bhi08G000521 vs. TrEMBL
Match: tr|A0A0A0K790|A0A0A0K790_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.5e-37
Identity = 87/156 (55.77%), Postives = 106/156 (67.95%), Query Frame = 0


Query: 1   MSSPIFSQSLSQLPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARA 60
           MSSP    SL  L P  +P   SL +LP +  DL TV M LL +LF F+   C KR+A++
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  ----LPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 120
               LPENL+I+A  F Y+  E  DE+EC ICL +IEEG+KCR+M TCGHVFHKDCID+W
Sbjct: 61  DGEELPENLDIEAPIFHYNGVE-GDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRW 120

Query: 121 FTVERHCPLCRTSVCVVVDRHENTTPSSSSSSPIPF 153
           F V+ HCP+CRTSVCVVV  H     +SSSS P PF
Sbjct: 121 FKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPF 155

[Close]

BLAST of Bhi08G000521 vs. TrEMBL
Match: tr|A0A1S3C741|A0A1S3C741_CUCME (RING-H2 finger protein ATL63-like OS=Cucumis melo OX=3656 GN=LOC103497233 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.2e-33
Identity = 83/150 (55.33%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 1   MSSPIFSQSLSQLPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARA 60
           MSSPI    L  LPP  LPP  S  VLP+  EDL  +               C KR+A++
Sbjct: 1   MSSPILLPFLLPLPPSPLPPLHSPIVLPRSIEDLLMLSXXXXXXXXXXXXXLCGKRSAKS 60

Query: 61  ----LPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 120
               L +NL IQA  F Y   + DDE+EC ICL +IEEG+KCR+M TCGH FHKDCID+W
Sbjct: 61  DEKELSKNLNIQAPIFHYG-IDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRW 120

Query: 121 FTVERHCPLCRTSVCVVVDRHENTTPSSSS 147
           FTVE HCPLCRTS CVVVDR EN   SSSS
Sbjct: 121 FTVELHCPLCRTSGCVVVDRSENVMASSSS 149

[Close]

BLAST of Bhi08G000521 vs. TrEMBL
Match: tr|A0A1S3C6H2|A0A1S3C6H2_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497232 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-31
Identity = 80/151 (52.98%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 1   MSSPIFSQSLSQLPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAAR- 60
           MSSPI    L  LPP  +PP  S  VLP+  EDL                  C KR+A+ 
Sbjct: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60

Query: 61  ----ALPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQ 120
               +L +N++IQA  F Y   + D E+EC ICL +IEEG+KCR++ TCGHVFHKDCID+
Sbjct: 61  DEEESLSKNIDIQAPIFHY-SVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDR 120

Query: 121 WFTVERHCPLCRTSVCVVVDRHENTTPSSSS 147
           WFTVE HCPLCRTSVCVVVD  EN   SSSS
Sbjct: 121 WFTVELHCPLCRTSVCVVVDCSENAMASSSS 150

[Close]

BLAST of Bhi08G000521 vs. TrEMBL
Match: tr|A0A0A0LY10|A0A0A0LY10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.3e-31
Identity = 73/144 (50.69%), Postives = 96/144 (66.67%), Query Frame = 0


Query: 13  LPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARA----LPENLEIQ 72
           L P  LP   SL +LP+Y EDL    MFL  +L  F++  C KR+A++     PEN++I+
Sbjct: 3   LSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVDIE 62

Query: 73  ASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRT 132
           A  F Y  +E   E++C ICL +IEEG+KCR+M TCGHVFHKDCI +WF V+ HCP+CRT
Sbjct: 63  APIFHYGGDE-GGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICRT 122

Query: 133 SVCVVVDRHENTTPSSSSSSPIPF 153
           SVCVVV        +SS+S  IP+
Sbjct: 123 SVCVVVVDRGGNAITSSTSLLIPY 145

[Close]

BLAST of Bhi08G000521 vs. TrEMBL
Match: tr|A0A1S3C5E4|A0A1S3C5E4_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497234 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.1e-30
Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 39  MFLLFILFFFLASFCSKRAARA----LPENLEIQASTFSYDKEEDDDEKECVICLYKIEE 98
           M LLF+L   +A    +R+A++    L +NL+IQAS F Y   + DDE+EC ICL +IEE
Sbjct: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYG-VDGDDEQECAICLCEIEE 60

Query: 99  GDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRTSVCVVVDRHENTTPSSSS 147
           G+KCR+M  CGHVFHKDCID+WFTVE HCPLCRTSVCVVVDR EN   SSSS
Sbjct: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSS 111

[Close]

BLAST of Bhi08G000521 vs. NCBI nr
Match: KGN44779.1 (hypothetical protein Csa_7G387140 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 5.3e-37
Identity = 87/156 (55.77%), Postives = 106/156 (67.95%), Query Frame = 0


Query: 1   MSSPIFSQSLSQLPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARA 60
           MSSP    SL  L P  +P   SL +LP +  DL TV M LL +LF F+   C KR+A++
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  ----LPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 120
               LPENL+I+A  F Y+  E  DE+EC ICL +IEEG+KCR+M TCGHVFHKDCID+W
Sbjct: 61  DGEELPENLDIEAPIFHYNGVE-GDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRW 120

Query: 121 FTVERHCPLCRTSVCVVVDRHENTTPSSSSSSPIPF 153
           F V+ HCP+CRTSVCVVV  H     +SSSS P PF
Sbjct: 121 FKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPTPF 155

[Close]

BLAST of Bhi08G000521 vs. NCBI nr
Match: XP_011659772.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 8.4e-35
Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 0


Query: 13  LPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARA----LPENLEIQ 72
           L P  +P   SL +LP +  DL TV M LL +LF F+   C KR+A++    LPENL+I+
Sbjct: 3   LSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKSDGEELPENLDIE 62

Query: 73  ASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRT 132
           A  F Y+  E  DE+EC ICL +IEEG+KCR+M TCGHVFHKDCID+WF V+ HCP+CRT
Sbjct: 63  APIFHYNGVE-GDEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRT 122

Query: 133 SVCVVVDRHENTTPSSSSSSPIPF 153
           SVCVVV  H     +SSSS P PF
Sbjct: 123 SVCVVVVDHGGNAMASSSSLPTPF 145

[Close]

BLAST of Bhi08G000521 vs. NCBI nr
Match: XP_008457567.1 (PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 7.9e-33
Identity = 83/150 (55.33%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 1   MSSPIFSQSLSQLPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARA 60
           MSSPI    L  LPP  LPP  S  VLP+  EDL  +               C KR+A++
Sbjct: 1   MSSPILLPFLLPLPPSPLPPLHSPIVLPRSIEDLLMLSXXXXXXXXXXXXXLCGKRSAKS 60

Query: 61  ----LPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQW 120
               L +NL IQA  F Y   + DDE+EC ICL +IEEG+KCR+M TCGH FHKDCID+W
Sbjct: 61  DEKELSKNLNIQAPIFHYG-IDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRW 120

Query: 121 FTVERHCPLCRTSVCVVVDRHENTTPSSSS 147
           FTVE HCPLCRTS CVVVDR EN   SSSS
Sbjct: 121 FTVELHCPLCRTSGCVVVDRSENVMASSSS 149

[Close]

BLAST of Bhi08G000521 vs. NCBI nr
Match: XP_008457566.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 2.5e-31
Identity = 80/151 (52.98%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 1   MSSPIFSQSLSQLPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAAR- 60
           MSSPI    L  LPP  +PP  S  VLP+  EDL                  C KR+A+ 
Sbjct: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60

Query: 61  ----ALPENLEIQASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQ 120
               +L +N++IQA  F Y   + D E+EC ICL +IEEG+KCR++ TCGHVFHKDCID+
Sbjct: 61  DEEESLSKNIDIQAPIFHY-SVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDR 120

Query: 121 WFTVERHCPLCRTSVCVVVDRHENTTPSSSS 147
           WFTVE HCPLCRTSVCVVVD  EN   SSSS
Sbjct: 121 WFTVELHCPLCRTSVCVVVDCSENAMASSSS 150

[Close]

BLAST of Bhi08G000521 vs. NCBI nr
Match: XP_011648513.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus] >KGN65717.1 hypothetical protein Csa_1G514470 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 1.3e-30
Identity = 73/144 (50.69%), Postives = 96/144 (66.67%), Query Frame = 0


Query: 13  LPPLLLPPRRSLYVLPQYGEDLATVFMFLLFILFFFLASFCSKRAARA----LPENLEIQ 72
           L P  LP   SL +LP+Y EDL    MFL  +L  F++  C KR+A++     PEN++I+
Sbjct: 3   LSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEEFPENVDIE 62

Query: 73  ASTFSYDKEEDDDEKECVICLYKIEEGDKCRRMNTCGHVFHKDCIDQWFTVERHCPLCRT 132
           A  F Y  +E   E++C ICL +IEEG+KCR+M TCGHVFHKDCI +WF V+ HCP+CRT
Sbjct: 63  APIFHYGGDE-GGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPICRT 122

Query: 133 SVCVVVDRHENTTPSSSSSSPIPF 153
           SVCVVV        +SS+S  IP+
Sbjct: 123 SVCVVVVDRGGNAITSSTSLLIPY 145

The following BLAST results are available for this feature:

BLAST of Bhi08G000521 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22255\|ATL64_ARATH	1.3e-10	47.50	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
sp\|Q8L9T5\|ATL2_ARATH	2.9e-10	40.54	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
sp\|Q9P7E1\|YOF7_SCHPO	3.7e-10	40.85	Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe (strai...	[more]
sp\|P93823\|ATL1_ARATH	8.3e-10	39.19	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
sp\|P0C035\|ATL60_ARATH	1.4e-09	44.93	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]

BLAST of Bhi08G000521 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47560.1	7.1e-12	47.50	RING/U-box superfamily protein	[more]
AT3G16720.1	1.6e-11	40.54	TOXICOS EN LEVADURA 2	[more]
AT1G04360.1	4.6e-11	39.19	RING/U-box superfamily protein	[more]
AT1G53820.1	7.9e-11	44.93	RING/U-box superfamily protein	[more]
AT3G14320.1	1.0e-10	45.28	Zinc finger, C3HC4 type (RING finger) family protein	[more]

BLAST of Bhi08G000521 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K790\|A0A0A0K790_CUCSA	3.5e-37	55.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1	[more]
tr\|A0A1S3C741\|A0A1S3C741_CUCME	5.2e-33	55.33	RING-H2 finger protein ATL63-like OS=Cucumis melo OX=3656 GN=LOC103497233 PE=4 S...	[more]
tr\|A0A1S3C6H2\|A0A1S3C6H2_CUCME	1.7e-31	52.98	RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497232 PE=4 S...	[more]
tr\|A0A0A0LY10\|A0A0A0LY10_CUCSA	8.3e-31	50.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=4 SV=1	[more]
tr\|A0A1S3C5E4\|A0A1S3C5E4_CUCME	4.1e-30	62.50	RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497234 PE=4 S...	[more]

BLAST of Bhi08G000521 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44779.1	5.3e-37	55.77	hypothetical protein Csa_7G387140 [Cucumis sativus]	[more]
XP_011659772.1	8.4e-35	56.25	PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus]	[more]
XP_008457567.1	7.9e-33	55.33	PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo]	[more]
XP_008457566.1	2.5e-31	52.98	PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo]	[more]
XP_011648513.1	1.3e-30	50.69	PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus] >KGN65717.1 hypot...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000521	Bhi08M000521	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 85..126 e-value: 3.6E-6 score: 36.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 83..127 e-value: 6.4E-14 score: 51.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 85..127 score: 12.784
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 63..135 e-value: 6.0E-20 score: 72.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..163
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 34..147
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 72..135

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000521	MELO3C020632	Melon (DHL92) v3.5.1	mewgoB161
Bhi08G000521	ClCG03G001500	Watermelon (Charleston Gray)	wcgwgoB340
Bhi08G000521	CSPI01G23070	Wild cucumber (PI 183967)	cpiwgoB048
Bhi08G000521	Cucsa.117910	Cucumber (Gy14) v1	cgywgoB204
Bhi08G000521	CmaCh01G006030	Cucurbita maxima (Rimu)	cmawgoB0593
Bhi08G000521	CmoCh01G006270	Cucurbita moschata (Rifu)	cmowgoB0590
Bhi08G000521	Cp4.1LG02g13380	Cucurbita pepo (Zucchini)	cpewgoB0697
Bhi08G000521	MELO3C035276.2	Melon (DHL92) v3.6.1	medwgoB164
Bhi08G000521	Cla008241	Watermelon (97103) v1	wgowmB471
Bhi08G000521	Cla97C03G052440	Watermelon (97103) v2	wgowmbB470

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000521	Wax gourd	wgowgoB103
Bhi08G000521	Cucumber (Gy14) v2	cgybwgoB045
Bhi08G000521	Cucumber (Gy14) v2	cgybwgoB605
Bhi08G000521	Cucurbita maxima (Rimu)	cmawgoB0252
Bhi08G000521	Cucurbita maxima (Rimu)	cmawgoB0703
Bhi08G000521	Cucurbita maxima (Rimu)	cmawgoB0769
Bhi08G000521	Cucurbita moschata (Rifu)	cmowgoB0245
Bhi08G000521	Cucurbita moschata (Rifu)	cmowgoB0761
Bhi08G000521	Cucurbita pepo (Zucchini)	cpewgoB0372
Bhi08G000521	Cucurbita pepo (Zucchini)	cpewgoB0650
Bhi08G000521	Cucurbita pepo (Zucchini)	cpewgoB0968
Bhi08G000521	Wild cucumber (PI 183967)	cpiwgoB641
Bhi08G000521	Cucumber (Chinese Long) v3	cucwgoB050
Bhi08G000521	Cucumber (Chinese Long) v3	cucwgoB655
Bhi08G000521	Cucumber (Chinese Long) v2	cuwgoB048
Bhi08G000521	Cucumber (Chinese Long) v2	cuwgoB635
Bhi08G000521	Bottle gourd (USVL1VR-Ls)	lsiwgoB094
Bhi08G000521	Bottle gourd (USVL1VR-Ls)	lsiwgoB239
Bhi08G000521	Melon (DHL92) v3.6.1	medwgoB147
Bhi08G000521	Melon (DHL92) v3.5.1	mewgoB144
Bhi08G000521	Watermelon (Charleston Gray)	wcgwgoB315
Bhi08G000521	Watermelon (97103) v2	wgowmbB467
Bhi08G000521	Watermelon (97103) v1	wgowmB520
Bhi08G000521	Silver-seed gourd	carwgoB0393
Bhi08G000521	Silver-seed gourd	carwgoB0426
Bhi08G000521	Silver-seed gourd	carwgoB0468
Bhi08G000521	Silver-seed gourd	carwgoB0535