MELO3C020632 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020632
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRing finger protein, putative
Locationchr12 : 1725350 .. 1725703 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATATGGCAGACGATCTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGTGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGATGTGTGGTCACGTGTTCCATAAAGACTGCATCGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTCTTCTTCATCCTTTCCGACCCTCTTGAACTGA

mRNA sequence

ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATATGGCAGACGATCTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGTGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGATGTGTGGTCACGTGTTCCATAAAGACTGCATCGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTCTTCTTCATCCTTTCCGACCCTCTTGAACTGA

Coding sequence (CDS)

ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATATGGCAGACGATCTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGTGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGATGTGTGGTCACGTGTTCCATAAAGACTGCATCGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTCTTCTTCATCCTTTCCGACCCTCTTGAACTGA

Protein sequence

MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN*
Homology
[Close]
BLAST of MELO3C020632 vs. Swiss-Prot
Match: EL5_ORYSJ (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.1e-11
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 1 

Query: 43  DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCV 98
           + DD  ECA+CL E+E+GE+ R +  CGH FH +C+D W      CPLCR +V V
Sbjct: 127 EDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVV 181

[Close]
BLAST of MELO3C020632 vs. Swiss-Prot
Match: ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.0e-11
Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 1 

Query: 19  SAKSDEEELSKNLDIQASVFHYGV---DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHK 78
           +A  D++ L  ++     +F Y     + D+E+EC ICL   E G+  RK++ CGH FH 
Sbjct: 104 TATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHV 163

Query: 79  DCIDRWFTVELHCPLCRTSVCVVVDRSEN 105
           +CID W +    CPLCR+ V   V   EN
Sbjct: 164 ECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]
BLAST of MELO3C020632 vs. Swiss-Prot
Match: ATL66_ARATH (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 26/53 (49.06%), Postives = 33/53 (62.26%), Query Frame = 1 

Query: 45  DDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCV 98
           ++E+EC ICL   EEGEK + +  C H +H +C+DRW   E  CPLCR S+ V
Sbjct: 102 EEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]
BLAST of MELO3C020632 vs. Swiss-Prot
Match: ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 36/97 (37.11%), Postives = 48/97 (49.48%), Query Frame = 1 

Query: 15  YGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 74
           + +R   + EE+ SKN                 QEC++CL E +E EK R +  C HVFH
Sbjct: 115 FKKRDVVAGEEDQSKN----------------SQECSVCLNEFQEDEKLRIIPNCCHVFH 174

Query: 75  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSS 112
            DCID W     +CPLCRTSV      + + +++ SS
Sbjct: 175 IDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSS 195

[Close]
BLAST of MELO3C020632 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 29/61 (47.54%), Postives = 35/61 (57.38%), Query Frame = 1 

Query: 37  VFHYGVDGDDE--QECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTS 96
           +F Y V   +   +EC++CL E EE ++ R +  CGHVFH DCID WF     CPLCR  
Sbjct: 98  IFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAP 157

[Close]
BLAST of MELO3C020632 vs. TrEMBL
Match: A0A0A0K790_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 7.7e-41
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHY-GVDGDDEQECAICLCEIEE 60
           M+LL VL   I IL  +RSAKSD EEL +NLDI+A +FHY GV+GD EQECAICLCEIEE
Sbjct: 39  MLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGD-EQECAICLCEIEE 98

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFPT 115
           GEKCRKMK CGHVFHKDCIDRWF V+ HCP+CRTSVC VVVD   NAMASSSS PT
Sbjct: 99  GEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPT 153

[Close]
BLAST of MELO3C020632 vs. TrEMBL
Match: A0A0A0LUU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G512470 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.0e-40
Identity = 87/116 (75.00%), Postives = 94/116 (81.03%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHY-GVDGDDEQECAICLCEIEE 60
           M+LL VL L IAIL  +RSAK D EE S NLDI+A +FHY GV+G  EQEC ICLCEIEE
Sbjct: 8   MLLLIVLFLFIAILCTKRSAKYDGEESSDNLDIEAPIFHYSGVEGG-EQECVICLCEIEE 67

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFPT 115
           GEKCRKMK CGHVFHKDCIDRWF V  HCP+CRTSVC VV+DR  NAMASSSS PT
Sbjct: 68  GEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCMVVIDRGGNAMASSSSLPT 122

[Close]
BLAST of MELO3C020632 vs. TrEMBL
Match: A0A0A0LY10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G514470 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.0e-38
Identity = 79/112 (70.54%), Postives = 90/112 (80.36%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M L  VLLL I+IL  +RSAKSD EE  +N+DI+A +FHYG D   EQ+CAICLCEIEEG
Sbjct: 29  MFLSIVLLLFISILCRKRSAKSDVEEFPENVDIEAPIFHYGGDEGGEQDCAICLCEIEEG 88

Query: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSS 112
           EKCRKMK CGHVFHKDCI RWF V+ HCP+CRTSVC VVVDR  NA+ SS+S
Sbjct: 89  EKCRKMKTCGHVFHKDCIGRWFKVDGHCPICRTSVCVVVVDRGGNAITSSTS 140

[Close]
BLAST of MELO3C020632 vs. TrEMBL
Match: A0A0A0LY13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G521990 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-37
Identity = 80/114 (70.18%), Postives = 89/114 (78.07%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M L  VLL  I+I+  +R AKSD EEL KN+D++A VFHY  D   EQE AICLCEIEEG
Sbjct: 4   MFLPIVLLFFISIVCSKRFAKSDVEELPKNVDLEALVFHYNGDEGGEQEYAICLCEIEEG 63

Query: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFP 114
           EKCRKMK CGHVFHKDCIDRWF V+ HCP+CRTSVC VVVD   NAMASS+S P
Sbjct: 64  EKCRKMKTCGHVFHKDCIDRWFKVDDHCPICRTSVCVVVVDHGGNAMASSTSLP 117

[Close]
BLAST of MELO3C020632 vs. TrEMBL
Match: A0A0A0LXE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G515480 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-15
Identity = 39/75 (52.00%), Postives = 50/75 (66.67%), Query Frame = 1 

Query: 31  LDIQASVFHY-----GVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVE 90
           + I+  VF Y     G + DD+ EC ICL + E+G+KC+ MK CGH+FH  CIDRW   E
Sbjct: 72  VQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTE 131

Query: 91  LHCPLCRTSVCVVVD 101
             CPLCR+ VCVVV+
Sbjct: 132 RECPLCRSCVCVVVN 146

[Close]
BLAST of MELO3C020632 vs. TAIR10
Match: AT5G58580.1 (AT5G58580.1 TOXICOS EN LEVADURA 63)

HSP 1 Score: 68.2 bits (165), Expect = 4.0e-12
Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 1 

Query: 19  SAKSDEEELSKNLDIQASVFHYGV---DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHK 78
           +A  D++ L  ++     +F Y     + D+E+EC ICL   E G+  RK++ CGH FH 
Sbjct: 104 TATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHV 163

Query: 79  DCIDRWFTVELHCPLCRTSVCVVVDRSEN 105
           +CID W +    CPLCR+ V   V   EN
Sbjct: 164 ECIDMWLSSHSTCPLCRSPVLAAVSDEEN 192

[Close]
BLAST of MELO3C020632 vs. TAIR10
Match: AT1G04360.1 (AT1G04360.1 RING/U-box superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 6.8e-12
Identity = 36/97 (37.11%), Postives = 48/97 (49.48%), Query Frame = 1 

Query: 15  YGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 74
           + +R   + EE+ SKN                 QEC++CL E +E EK R +  C HVFH
Sbjct: 115 FKKRDVVAGEEDQSKN----------------SQECSVCLNEFQEDEKLRIIPNCCHVFH 174

Query: 75  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSS 112
            DCID W     +CPLCRTSV      + + +++ SS
Sbjct: 175 IDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSS 195

[Close]
BLAST of MELO3C020632 vs. TAIR10
Match: AT3G11110.1 (AT3G11110.1 RING/U-box superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 6.8e-12
Identity = 26/53 (49.06%), Postives = 33/53 (62.26%), Query Frame = 1 

Query: 45  DDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCV 98
           ++E+EC ICL   EEGEK + +  C H +H +C+DRW   E  CPLCR S+ V
Sbjct: 102 EEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]
BLAST of MELO3C020632 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 67.0 bits (162), Expect = 8.8e-12
Identity = 29/61 (47.54%), Postives = 35/61 (57.38%), Query Frame = 1 

Query: 37  VFHYGVDGDDE--QECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTS 96
           +F Y V   +   +EC++CL E EE ++ R +  CGHVFH DCID WF     CPLCR  
Sbjct: 98  IFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAP 157

[Close]
BLAST of MELO3C020632 vs. TAIR10
Match: AT1G53820.1 (AT1G53820.1 RING/U-box superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-11
Identity = 28/58 (48.28%), Postives = 33/58 (56.90%), Query Frame = 1 

Query: 43  DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVD 101
           D  D  ECA+CL ++ +G+K R +  C H FH DCID WF     CPLCR +V  V D
Sbjct: 113 DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVED 170

[Close]
BLAST of MELO3C020632 vs. NCBI nr
Match: gi|659115460|ref|XP_008457568.1| (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-61
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60

Query: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN
Sbjct: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]
BLAST of MELO3C020632 vs. NCBI nr
Match: gi|659115458|ref|XP_008457567.1| (PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 1.8e-54
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M LL VL+LVIAIL G+RSAKSDE+ELSKNL+IQA +FHYG+DGDDEQECAICLCEIEEG
Sbjct: 39  MFLLLVLILVIAILCGKRSAKSDEKELSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEG 98

Query: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           EKCRKMK CGH FHKDCIDRWFTVELHCPLCRTS CVVVDRSEN MASSSSFPTLLN
Sbjct: 99  EKCRKMKTCGHAFHKDCIDRWFTVELHCPLCRTSGCVVVDRSENVMASSSSFPTLLN 155

[Close]
BLAST of MELO3C020632 vs. NCBI nr
Match: gi|659115456|ref|XP_008457566.1| (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-52
Identity = 103/118 (87.29%), Postives = 109/118 (92.37%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEE-LSKNLDIQASVFHYGVDGDDEQECAICLCEIEE 60
           M+LL VL+LVI IL G+RSAKSDEEE LSKN+DIQA +FHY VDGD EQECAICLCEIEE
Sbjct: 39  MLLLLVLILVITILCGKRSAKSDEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEE 98

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           GEKCRK+K CGHVFHKDCIDRWFTVELHCPLCRTSVCVVVD SENAMASSSSFPTLLN
Sbjct: 99  GEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 156

[Close]
BLAST of MELO3C020632 vs. NCBI nr
Match: gi|778730799|ref|XP_011659858.1| (PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 4.5e-42
Identity = 88/115 (76.52%), Postives = 94/115 (81.74%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           M+LL VL L IAIL  +RSAKSD EELS+NLDI+A +FHY      EQECAICLCEIEEG
Sbjct: 29  MLLLIVLFLFIAILCTKRSAKSDREELSENLDIEAPIFHYNEVEGGEQECAICLCEIEEG 88

Query: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVV-DRSENAMASSSSFPT 115
           EKCRKMK CGHVFHKDCIDRWF V  HCP+CRTSVCVVV DR  NAMASSSS PT
Sbjct: 89  EKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCVVVIDRGGNAMASSSSLPT 143

[Close]
BLAST of MELO3C020632 vs. NCBI nr
Match: gi|778730386|ref|XP_011659772.1| (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 1 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHY-GVDGDDEQECAICLCEIEE 60
           M+LL VL   I IL  +RSAKSD EEL +NLDI+A +FHY GV+GD EQECAICLCEIEE
Sbjct: 29  MLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEGD-EQECAICLCEIEE 88

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFPT 115
           GEKCRKMK CGHVFHKDCIDRWF V+ HCP+CRTSVC VVVD   NAMASSSS PT
Sbjct: 89  GEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPT 143

The following BLAST results are available for this feature:
BLAST of MELO3C020632 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EL5_ORYSJ4.1e-1149.09E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica GN=EL5.1 PE=1 SV... [more]
ATL63_ARATH7.0e-1138.20RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1[more]
ATL66_ARATH1.2e-1049.06RING-H2 finger protein ATL66 OS=Arabidopsis thaliana GN=ATL66 PE=2 SV=1[more]
ATL1_ARATH1.2e-1037.11RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=1[more]
ATL5_ARATH1.6e-1047.54RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
BLAST of MELO3C020632 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K790_CUCSA7.7e-4175.86Uncharacterized protein OS=Cucumis sativus GN=Csa_7G387140 PE=4 SV=1[more]
A0A0A0LUU6_CUCSA5.0e-4075.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G512470 PE=4 SV=1[more]
A0A0A0LY10_CUCSA8.0e-3870.54Uncharacterized protein OS=Cucumis sativus GN=Csa_1G514470 PE=4 SV=1[more]
A0A0A0LY13_CUCSA1.8e-3770.18Uncharacterized protein OS=Cucumis sativus GN=Csa_1G521990 PE=4 SV=1[more]
A0A0A0LXE1_CUCSA1.1e-1552.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G515480 PE=4 SV=1[more]
BLAST of MELO3C020632 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58580.14.0e-1238.20 TOXICOS EN LEVADURA 63[more]
AT1G04360.16.8e-1237.11 RING/U-box superfamily protein[more]
AT3G11110.16.8e-1249.06 RING/U-box superfamily protein[more]
AT3G62690.18.8e-1247.54 AtL5[more]
AT1G53820.12.0e-1148.28 RING/U-box superfamily protein[more]
BLAST of MELO3C020632 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115460|ref|XP_008457568.1|1.1e-61100.00PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo][more]
gi|659115458|ref|XP_008457567.1|1.8e-5488.03PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo][more]
gi|659115456|ref|XP_008457566.1|2.2e-5287.29PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo][more]
gi|778730799|ref|XP_011659858.1|4.5e-4276.52PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus][more]
gi|778730386|ref|XP_011659772.1|1.1e-4075.86PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020632T1MELO3C020632T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 48..92
score: 2.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 50..91
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 50..92
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 45..95
score: 9.4
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..117
score: 9.9
NoneNo IPR availablePANTHERPTHR14155:SF147SUBFAMILY NOT NAMEDcoord: 1..117
score: 9.9
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 41..99
score: 5.65

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C020632Cla008241Watermelon (97103) v1mewmB146
MELO3C020632ClCG03G001500Watermelon (Charleston Gray)mewcgB149
MELO3C020632Cla97C03G052440Watermelon (97103) v2mewmbB153
MELO3C020632Bhi08G000521Wax gourdmewgoB161
MELO3C020632Cucsa.117910Cucumber (Gy14) v1cgymeB175
MELO3C020632CmaCh14G001590Cucurbita maxima (Rimu)cmameB216
MELO3C020632CmaCh06G003060Cucurbita maxima (Rimu)cmameB750
MELO3C020632CmaCh01G006030Cucurbita maxima (Rimu)cmameB391
MELO3C020632CmoCh01G006270Cucurbita moschata (Rifu)cmomeB382
MELO3C020632Lsi02G013590Bottle gourd (USVL1VR-Ls)lsimeB174
MELO3C020632Cp4.1LG02g13390Cucurbita pepo (Zucchini)cpemeB490
MELO3C020632Carg20658Silver-seed gourdcarmeB0388
MELO3C020632Carg12371Silver-seed gourdcarmeB0449
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020632Silver-seed gourdcarmeB0309
MELO3C020632Silver-seed gourdcarmeB0971
MELO3C020632Cucumber (Chinese Long) v3cucmeB025
MELO3C020632Cucumber (Chinese Long) v3cucmeB183
MELO3C020632Cucumber (Chinese Long) v3cucmeB462
MELO3C020632Watermelon (97103) v2mewmbB148
MELO3C020632Watermelon (97103) v2mewmbB150
MELO3C020632Wax gourdmewgoB155
MELO3C020632Melon (DHL92) v3.5.1memeB036
MELO3C020632Melon (DHL92) v3.5.1memeB072
MELO3C020632Cucumber (Gy14) v1cgymeB313
MELO3C020632Cucurbita maxima (Rimu)cmameB194
MELO3C020632Cucurbita maxima (Rimu)cmameB509
MELO3C020632Cucurbita maxima (Rimu)cmameB560
MELO3C020632Cucurbita maxima (Rimu)cmameB665
MELO3C020632Cucurbita moschata (Rifu)cmomeB181
MELO3C020632Cucurbita moschata (Rifu)cmomeB550
MELO3C020632Wild cucumber (PI 183967)cpimeB025
MELO3C020632Wild cucumber (PI 183967)cpimeB180
MELO3C020632Wild cucumber (PI 183967)cpimeB450
MELO3C020632Cucumber (Chinese Long) v2cumeB028
MELO3C020632Cucumber (Chinese Long) v2cumeB185
MELO3C020632Cucumber (Chinese Long) v2cumeB457
MELO3C020632Watermelon (Charleston Gray)mewcgB128
MELO3C020632Watermelon (Charleston Gray)mewcgB147
MELO3C020632Watermelon (97103) v1mewmB176
MELO3C020632Cucurbita pepo (Zucchini)cpemeB269
MELO3C020632Cucurbita pepo (Zucchini)cpemeB479
MELO3C020632Cucurbita pepo (Zucchini)cpemeB682
MELO3C020632Bottle gourd (USVL1VR-Ls)lsimeB062
MELO3C020632Cucumber (Gy14) v2cgybmeB023
MELO3C020632Cucumber (Gy14) v2cgybmeB155