MELO3C035276.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C035276.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	RING-H2 finger protein ATL64-like
Location	chr12 : 1717594 .. 1718064 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCACCAATTCTTTTACCATTCCTCTTGCCATTGCCACCATCGCCAGTGCCGCCGTTACACTCACCGATCGTACTTCCTCGCTCCATCGAGGATTTGCTGATGCTCTCCATGTTACTTCTCCTTGTACTTATTTTAGTCATTACCATTTTATGTGGCAAACGATCTGCCAAATCTGACGAGGAAGAGTCGTTGTCGAAGAATATAGACATTCAAGCACCAATTTTTCATTACAGCGTAGATGGAGACATCGAACAAGAATGTGCAATTTGTCTTTGCGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATAAAGACGTGTGGTCACGTATTTCATAAAGACTGCATTGATCGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATTGCAGTGAAAATGCCATGGCTTCTTCTTCATCATTTCCGACCCTCTTGAACTGA

mRNA sequence

ATGTCATCACCAATTCTTTTACCATTCCTCTTGCCATTGCCACCATCGCCAGTGCCGCCGTTACACTCACCGATCGTACTTCCTCGCTCCATCGAGGATTTGCTGATGCTCTCCATGTTACTTCTCCTTGTACTTATTTTAGTCATTACCATTTTATGTGGCAAACGATCTGCCAAATCTGACGAGGAAGAGTCGTTGTCGAAGAATATAGACATTCAAGCACCAATTTTTCATTACAGCGTAGATGGAGACATCGAACAAGAATGTGCAATTTGTCTTTGCGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATAAAGACGTGTGGTCACGTATTTCATAAAGACTGCATTGATCGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATTGCAGTGAAAATGCCATGGCTTCTTCTTCATCATTTCCGACCCTCTTGAACTGA

Coding sequence (CDS)

ATGTCATCACCAATTCTTTTACCATTCCTCTTGCCATTGCCACCATCGCCAGTGCCGCCGTTACACTCACCGATCGTACTTCCTCGCTCCATCGAGGATTTGCTGATGCTCTCCATGTTACTTCTCCTTGTACTTATTTTAGTCATTACCATTTTATGTGGCAAACGATCTGCCAAATCTGACGAGGAAGAGTCGTTGTCGAAGAATATAGACATTCAAGCACCAATTTTTCATTACAGCGTAGATGGAGACATCGAACAAGAATGTGCAATTTGTCTTTGCGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATAAAGACGTGTGGTCACGTATTTCATAAAGACTGCATTGATCGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATTGCAGTGAAAATGCCATGGCTTCTTCTTCATCATTTCCGACCCTCTTGAACTGA

Protein sequence

MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMLSMLLLLVLILVITILCGKRSAKSDEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN

Homology

[Close]

BLAST of MELO3C035276.2 vs. NCBI nr
Match: XP_008457566.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 9.7e-73
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60
           MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS
Sbjct: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60

Query: 61  DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW 120
           DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW
Sbjct: 61  DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW 120

Query: 121 FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 157
           FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN
Sbjct: 121 FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 156

[Close]

BLAST of MELO3C035276.2 vs. NCBI nr
Match: XP_008457567.1 (PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 140/156 (89.74%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60
           MSSPILLPFLLPLPPSP+PPLHSPIVLPRSIEDLLM  XXXXXXXXXXXXX CGKRSAKS
Sbjct: 1   MSSPILLPFLLPLPPSPLPPLHSPIVLPRSIEDLLMLSXXXXXXXXXXXXXLCGKRSAKS 60

Query: 61  DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW 120
           DE+E LSKN++IQAPIFHY +DGD EQECAICLCEIEEGEKCRK+KTCGH FHKDCIDRW
Sbjct: 61  DEKE-LSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRW 120

Query: 121 FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 157
           FTVELHCPLCRTS CVVVD SEN MASSSSFPTLLN
Sbjct: 121 FTVELHCPLCRTSGCVVVDRSENVMASSSSFPTLLN 155

[Close]

BLAST of MELO3C035276.2 vs. NCBI nr
Match: XP_008457568.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 7.0e-47
Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 54  GKRSAKSDEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFH 113
           G+RSAKSDEEE LSKN+DIQA +FHY VDGD EQECAICLCEIEEGEKCRK+K CGHVFH
Sbjct: 16  GRRSAKSDEEE-LSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 75

Query: 114 KDCIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 157
           KDCIDRWFTVELHCPLCRTSVCVVVD SENAMASSSSFPTLLN
Sbjct: 76  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]

BLAST of MELO3C035276.2 vs. NCBI nr
Match: KGN44779.1 (hypothetical protein Csa_7G387140 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 7.8e-46
Identity = 105/155 (67.74%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60
           MSSP +LP L+PL PSP+P LHS I+LP  I DLL                 C KRSAKS
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  DEEESLSKNIDIQAPIFHYS-VDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDR 120
           D EE L +N+DI+APIFHY+ V+GD EQECAICLCEIEEGEKCRK+KTCGHVFHKDCIDR
Sbjct: 61  DGEE-LPENLDIEAPIFHYNGVEGD-EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 120

Query: 121 WFTVELHCPLCRTSVC-VVVDCSENAMASSSSFPT 154
           WF V+ HCP+CRTSVC VVVD   NAMASSSS PT
Sbjct: 121 WFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPT 153

[Close]

BLAST of MELO3C035276.2 vs. NCBI nr
Match: XP_011659858.1 (PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 4.7e-43
Identity = 105/144 (72.92%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 11  LPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKSDEEESLSKNI 70
           +PL PSP+PPLHSPI+LP     LL    XXXXXXXXX    C KRSAKSD EE LS+N+
Sbjct: 1   MPLSPSPLPPLHSPILLPGFFMVLLTISMXXXXXXXXXIAILCTKRSAKSDREE-LSENL 60

Query: 71  DIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLC 130
           DI+APIFHY+     EQECAICLCEIEEGEKCRK+KTCGHVFHKDCIDRWF V  HCP+C
Sbjct: 61  DIEAPIFHYNEVEGGEQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDRWFKVNGHCPIC 120

Query: 131 RTSVCVVV-DCSENAMASSSSFPT 154
           RTSVCVVV D   NAMASSSS PT
Sbjct: 121 RTSVCVVVIDRGGNAMASSSSLPT 143

[Close]

BLAST of MELO3C035276.2 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12
Identity = 32/62 (51.61%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 75  PIFHYSVDGDIE--QECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCRT 134
           PIF YSV       +EC++CL E EE ++ R +  CGHVFH DCID WF     CPLCR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]

BLAST of MELO3C035276.2 vs. TAIR10
Match: AT4G30400.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 75  PIFHY-SVDG--DIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCR 134
           P+FHY S+ G  +   +CA+CLCE E  +K R +  C H FH DCID W      CPLCR
Sbjct: 117 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176

[Close]

BLAST of MELO3C035276.2 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-12
Identity = 39/101 (38.61%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 60  SDEEESLSKNIDIQAPIFHYS----VDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKD 119
           S  +++L + +  + PIF YS            C++CL E EE ++ R +  CGH FH D
Sbjct: 75  SPRDQALDQAVLDKIPIFVYSSKXXXXXXXXXXCSVCLSEFEEEDEGRLLPKCGHSFHVD 134

Query: 120 CIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSS---FPT 154
           CID WF     CPLCR  V       E   +SSSS   FPT
Sbjct: 135 CIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]

BLAST of MELO3C035276.2 vs. TAIR10
Match: AT3G20395.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-12
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 62  EEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWF 121
           E++ LSK+     P+F+   +   +  C+ICL + EEGE  RK+  CGH FH +CID W 
Sbjct: 144 EKKGLSKSSIQNIPMFYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWL 203

Query: 122 TVELHCPLCR 132
             +  CP+CR
Sbjct: 204 LRQETCPICR 213

[Close]

BLAST of MELO3C035276.2 vs. TAIR10
Match: AT2G27940.1 (RING/U-box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-12
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 65  SLSKNIDIQA----PIFHYS-VDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDR 124
           S  + +D QA    P++ Y+       ++C ICL + EEGE  + I  CGHVFH DC+D 
Sbjct: 111 SFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDT 170

Query: 125 WFTVELHCPLCRTS 134
           W +  + CPLCR++
Sbjct: 171 WLSSYVTCPLCRSN 184

[Close]

BLAST of MELO3C035276.2 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11
Identity = 32/62 (51.61%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 75  PIFHYSVDGDIE--QECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCRT 134
           PIF YSV       +EC++CL E EE ++ R +  CGHVFH DCID WF     CPLCR 
Sbjct: 97  PIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRA 156

[Close]

BLAST of MELO3C035276.2 vs. Swiss-Prot
Match: sp|Q940Q4|ATL13_ARATH (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 5.5e-11
Identity = 30/63 (47.62%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 75  PIFHY-SVDG--DIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCR 134
           P+FHY S+ G  +   +CA+CLCE E  +K R +  C H FH DCID W      CPLCR
Sbjct: 117 PVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176

[Close]

BLAST of MELO3C035276.2 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.2e-11
Identity = 39/101 (38.61%), Postives = 51/101 (50.50%), Query Frame = 0


Query: 60  SDEEESLSKNIDIQAPIFHYS----VDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKD 119
           S  +++L + +  + PIF YS            C++CL E EE ++ R +  CGH FH D
Sbjct: 75  SPRDQALDQAVLDKIPIFVYSSKXXXXXXXXXXCSVCLSEFEEEDEGRLLPKCGHSFHVD 134

Query: 120 CIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSS---FPT 154
           CID WF     CPLCR  V       E   +SSSS   FPT
Sbjct: 135 CIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPT 175

[Close]

BLAST of MELO3C035276.2 vs. Swiss-Prot
Match: sp|Q9SJJ7|ATL57_ARATH (RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 65  SLSKNIDIQA----PIFHYS-VDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDR 124
           S  + +D QA    P++ Y+       ++C ICL + EEGE  + I  CGHVFH DC+D 
Sbjct: 111 SFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDT 170

Query: 125 WFTVELHCPLCRTS 134
           W +  + CPLCR++
Sbjct: 171 WLSSYVTCPLCRSN 184

[Close]

BLAST of MELO3C035276.2 vs. Swiss-Prot
Match: sp|P93823|ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10
Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 87  QECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDCSENAMA 146
           QEC++CL E +E EK R I  C HVFH DCID W     +CPLCRTSV      + + ++
Sbjct: 132 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLIS 191

Query: 147 SSSS 151
           + SS
Sbjct: 192 APSS 195

[Close]

BLAST of MELO3C035276.2 vs. TrEMBL
Match: tr|A0A1S3C6H2|A0A1S3C6H2_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497232 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.4e-73
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60
           MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS
Sbjct: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60

Query: 61  DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW 120
           DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW
Sbjct: 61  DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW 120

Query: 121 FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 157
           FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN
Sbjct: 121 FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 156

[Close]

BLAST of MELO3C035276.2 vs. TrEMBL
Match: tr|A0A1S3C741|A0A1S3C741_CUCME (RING-H2 finger protein ATL63-like OS=Cucumis melo OX=3656 GN=LOC103497233 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-64
Identity = 140/156 (89.74%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60
           MSSPILLPFLLPLPPSP+PPLHSPIVLPRSIEDLLM  XXXXXXXXXXXXX CGKRSAKS
Sbjct: 1   MSSPILLPFLLPLPPSPLPPLHSPIVLPRSIEDLLMLSXXXXXXXXXXXXXLCGKRSAKS 60

Query: 61  DEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRW 120
           DE+E LSKN++IQAPIFHY +DGD EQECAICLCEIEEGEKCRK+KTCGH FHKDCIDRW
Sbjct: 61  DEKE-LSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAFHKDCIDRW 120

Query: 121 FTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 157
           FTVELHCPLCRTS CVVVD SEN MASSSSFPTLLN
Sbjct: 121 FTVELHCPLCRTSGCVVVDRSENVMASSSSFPTLLN 155

[Close]

BLAST of MELO3C035276.2 vs. TrEMBL
Match: tr|A0A1S3C5E4|A0A1S3C5E4_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497234 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.6e-47
Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 54  GKRSAKSDEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFH 113
           G+RSAKSDEEE LSKN+DIQA +FHY VDGD EQECAICLCEIEEGEKCRK+K CGHVFH
Sbjct: 16  GRRSAKSDEEE-LSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 75

Query: 114 KDCIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 157
           KDCIDRWFTVELHCPLCRTSVCVVVD SENAMASSSSFPTLLN
Sbjct: 76  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]

BLAST of MELO3C035276.2 vs. TrEMBL
Match: tr|A0A0A0K790|A0A0A0K790_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.1e-46
Identity = 105/155 (67.74%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 1   MSSPILLPFLLPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKS 60
           MSSP +LP L+PL PSP+P LHS I+LP  I DLL                 C KRSAKS
Sbjct: 1   MSSPNILPSLMPLSPSPIPSLHSLILLPGFIMDLLTVPMLLLIVLFSFILILCRKRSAKS 60

Query: 61  DEEESLSKNIDIQAPIFHYS-VDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDR 120
           D EE L +N+DI+APIFHY+ V+GD EQECAICLCEIEEGEKCRK+KTCGHVFHKDCIDR
Sbjct: 61  DGEE-LPENLDIEAPIFHYNGVEGD-EQECAICLCEIEEGEKCRKMKTCGHVFHKDCIDR 120

Query: 121 WFTVELHCPLCRTSVC-VVVDCSENAMASSSSFPT 154
           WF V+ HCP+CRTSVC VVVD   NAMASSSS PT
Sbjct: 121 WFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPT 153

[Close]

BLAST of MELO3C035276.2 vs. TrEMBL
Match: tr|A0A0A0LY10|A0A0A0LY10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.2e-40
Identity = 90/141 (63.83%), Postives = 102/141 (72.34%), Query Frame = 0


Query: 11  LPLPPSPVPPLHSPIVLPRSIEDLLMXXXXXXXXXXXXXXXXCGKRSAKSDEEESLSKNI 70
           + L PSP+P LHS I+LPR IEDLLM                C KRSAKSD EE   +N+
Sbjct: 1   MSLSPSPLPSLHSLILLPRYIEDLLMASMFLSIVLLLFISILCRKRSAKSDVEE-FPENV 60

Query: 71  DIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFHKDCIDRWFTVELHCPLC 130
           DI+APIFHY  D   EQ+CAICLCEIEEGEKCRK+KTCGHVFHKDCI RWF V+ HCP+C
Sbjct: 61  DIEAPIFHYGGDEGGEQDCAICLCEIEEGEKCRKMKTCGHVFHKDCIGRWFKVDGHCPIC 120

Query: 131 RTSVC-VVVDCSENAMASSSS 151
           RTSVC VVVD   NA+ SS+S
Sbjct: 121 RTSVCVVVVDRGGNAITSSTS 140

The following BLAST results are available for this feature:

BLAST of MELO3C035276.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457566.1	9.7e-73	100.00	PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo]	[more]
XP_008457567.1	2.2e-64	89.74	PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo]	[more]
XP_008457568.1	7.0e-47	90.29	PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo]	[more]
KGN44779.1	7.8e-46	67.74	hypothetical protein Csa_7G387140 [Cucumis sativus]	[more]
XP_011659858.1	4.7e-43	72.92	PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]	[more]

BLAST of MELO3C035276.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62690.1	1.4e-12	51.61	AtL5	[more]
AT4G30400.1	3.1e-12	47.62	RING/U-box superfamily protein	[more]
AT2G47560.1	4.0e-12	38.61	RING/U-box superfamily protein	[more]
AT3G20395.1	5.2e-12	41.43	RING/U-box superfamily protein	[more]
AT2G27940.1	6.8e-12	40.54	RING/U-box superfamily protein	[more]

BLAST of MELO3C035276.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZJ6\|ATL5_ARATH	2.5e-11	51.61	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
sp\|Q940Q4\|ATL13_ARATH	5.5e-11	47.62	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
sp\|O22255\|ATL64_ARATH	7.2e-11	38.61	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
sp\|Q9SJJ7\|ATL57_ARATH	1.2e-10	40.54	RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1	[more]
sp\|P93823\|ATL1_ARATH	2.1e-10	48.44	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]

BLAST of MELO3C035276.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6H2\|A0A1S3C6H2_CUCME	6.4e-73	100.00	RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497232 PE=4 S...	[more]
tr\|A0A1S3C741\|A0A1S3C741_CUCME	1.4e-64	89.74	RING-H2 finger protein ATL63-like OS=Cucumis melo OX=3656 GN=LOC103497233 PE=4 S...	[more]
tr\|A0A1S3C5E4\|A0A1S3C5E4_CUCME	4.6e-47	90.29	RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497234 PE=4 S...	[more]
tr\|A0A0A0K790\|A0A0A0K790_CUCSA	5.1e-46	67.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1	[more]
tr\|A0A0A0LY10\|A0A0A0LY10_CUCSA	4.2e-40	63.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G514470 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035276.2.1	MELO3C035276.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 89..130 e-value: 7.0E-5 score: 32.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 87..131 e-value: 1.5E-12 score: 47.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 89..131 score: 12.711
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 68..137 e-value: 1.4E-17 score: 64.6
None	No IPR available	PANTHER	PTHR14155:SF283	SUBFAMILY NOT NAMED	coord: 47..138
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 47..138
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 88..138

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C035276.2	Cucsa.117910	Cucumber (Gy14) v1	cgymedB172
MELO3C035276.2	CmaCh01G006030	Cucurbita maxima (Rimu)	cmamedB451
MELO3C035276.2	CmoCh01G006270	Cucurbita moschata (Rifu)	cmomedB439
MELO3C035276.2	Cp4.1LG02g13390	Cucurbita pepo (Zucchini)	cpemedB581
MELO3C035276.2	Cla008241	Watermelon (97103) v1	medwmB143
MELO3C035276.2	ClCG03G001500	Watermelon (Charleston Gray)	medwcgB141
MELO3C035276.2	Cla97C03G052440	Watermelon (97103) v2	medwmbB142
MELO3C035276.2	Bhi08G000521	Wax gourd	medwgoB164
MELO3C035276.2	Carg20658	Silver-seed gourd	carmedB0392
MELO3C035276.2	Carg12371	Silver-seed gourd	carmedB0451
MELO3C035276.2	Carg12559	Silver-seed gourd	carmedB0981

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C035276.2	Cucumber (Gy14) v2	cgybmedB021
MELO3C035276.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C035276.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C035276.2	Cucurbita pepo (Zucchini)	cpemedB561
MELO3C035276.2	Cucumber (Chinese Long) v2	cumedB023
MELO3C035276.2	Wild cucumber (PI 183967)	cpimedB024
MELO3C035276.2	Bottle gourd (USVL1VR-Ls)	lsimedB183
MELO3C035276.2	Cucumber (Chinese Long) v3	cucmedB028
MELO3C035276.2	Cucumber (Chinese Long) v3	cucmedB023