Bhi07G000388 (gene) Wax gourd

Overview
NameBhi07G000388
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRNA-dependent RNA polymerase
Locationchr7 : 19008450 .. 19014545 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATAACGGTACCATAGAAGTAAAACTTAGCCACCAAGTTTTCTCTGTCATTTGCCCATAGAACAAGCGTCGCTTTGTCTTCGAATCCATAGTTCATCCCTCTTCTCTTGCAGTTGACTCTTCACACTCTCTCTGATATTATTCCTCTGATTTTTCACTGTTTTAAGGTCTTTTGCTCTTCTGAGTCATGTGGAACCTTCAAAATTCGCAAGTTTTCATTTGGGTTTATCGATTTATGCCTCTTGGAGGAGGTTTTTCATGTTTTTTTGAACCTGGGGTTGTATGTATTTCTGGAAACTTTTCTGTTTTCTTTTCTGCTCTTTTGATCTTTTTTAGTTGAGGTTTGATCTCTGTGAGTACTGAAGTTGGAAACTCCAACATTTTTTTTTTCTTTTTCTGGTGGTGTGCGTCTCTCCCTCCATTTTCATAACAAACTTTTCTTTGTTTTTCTTCGTTGGGTTTCTGTTGATTGAGTGTTTGTTGGCTAATATGGGGTTACTCCCCTTGTCTTCACTTCATTTAACTTTAGTATCTGCATCTGAATTGTCGCTGATTCTAATGCTAGACTGTTCGTGTTTGTTTCTTTTTGTAGGGCAAAATATACCTTTGGAAGTTTCTATAGTCATATTTTGTTCTTTCCCATTGTTTGGGAATGCTCCCTGCACACTAGAGCCATAATTCAAGTATAAGAGCATAGAAGTGAGGTTTTTTCTAATTTGTAGCTTCACTTGGTAAAGCAGGAAAAGACTGACAAAGTTCTTTGGAATCTTATGGGGAAAACAGTTCATATTAGTGGTTTTCCTTCAAATGTAACAGCAGATGCCGTTAAGAGTTTTCTGGAGGGTCGTACAGGTGTAGGAACTGTCTATGCTATTAAGGTTAGAGCACCTAAGAGAGGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGGGGAAAACAGTTCATATTAGTGGTTTTCCTTCAAATGTAACAGCAGATGCCGTTAAGAGTTTTCTGGAGGGTCGTACAGGTGTAGGAACTGTCTATGCTATTAAGGTTAGAGCACCTAAGAGAGGGGGAGCTAGAGTATATGCTATTGTTCAATTCACTAGTGCTACCCAAGCTGAGTTGATCATATCCTTAGCTAATCAAAGCCTATGGTACGGATCGTCTTATCTTAAGGCTCGAGCAGCCGAGGTTGATATTGTACCAAAGCCTAGGACATACATGTATACCTTGGAAGACTTGCCATTGTGCTTTGGGTGTCAGGTCTCAAGTGAAAAGTTTCGTGTTTTGTGGGAAGGAGATATTGATTTGGTGACTTTTGGAATTGGAATGCGAAAAATGAACTTCCATCTGAAACATAATTCTGTAAAGTATAGGCTTGAGCTTTCATACGAGAACATTTGGCAGATACAACTCCACCATCCACAACATCGATCTATGAAGTATCTTATCATCCAGGTTCTGTGATCAAATGTCTATCTAAAGTTGTCTCATTTTATTTTGAAAAGAATTATTATCCTCTCTAATAAAGTTGAAAAAATTTTCTATCCTTGTTAAAGCATTGTTTCAACTATTGCATTAGCATTGGTAATTTGAAATTAGAGTGTTATAGCCTTGTTGAAAAATGTTGCTTTCCTCTCTTAAAGTTGCCTGAATAAGAGTACTTTCTCTTTGAAAGTCGTAATGGTAGTTATGAACACCATAAGAAAGAGTGTTGAAAAAACTAGCGACGATTTCTTTAGCCACATCTTGCTTAATGTTGATACTAACAACACTGTTTTTTTATGATTGACATTGAACTTTAGGTCCTTTTTTTAATTTTTTTTTTTTAATTTTGACTGTTAGTGTTGTGGATTCTGTTCTGACTGATACTAAAAAGACAACAGTAACACCTAGTAATGATTTTTGGTTTGCATATATCTTTTTCATGATTATTGCCATCTTTTTAGATGTTAATGTTTAACTTTAAACATTTAGATGCTCCAACTTGTATGCTAAAATAACATTGTTGATTTATGTCCTTGGATTTTGAGTTCTCTTGTCTACTCATGAAATAATGTGGTTAGTTTGGATGGATAACGCCTGCTTGTGGATTTTGGTACATATGAAAACTAGATTATTTGTTCATAATGAAAGTTTTTGGTTCATTGCATGATATTGAGCCCTGCTATTGATTAAATAGTAGATCTGTTACTCACATGTCAAGCTTAATAGTCTGATTATAAATGTTATGTTTCTTTTATCAGTTATATGGAGCTCCTCGGATATATAAAAACGTTGCACCTTGTAGTGTACAAATCTTTGATGACCCACTTTTTAACTTTTTTATGGAAGTACCTGATGATCAATGGATTAGAACTGCTGATTTTACTCCATCATGCTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATCGCTGTCAACTTCCAAATTTTAGACAAAATTTTGCTTATTATGAAGAATTTGAAAATGAGTTCCAGTTGGTGGATGGAGATGCTAGTTTTTCTTTCTGTAGAGATCTTGCTCCTATTGTTGATTCTCGTCCTCATGTTCTGCCATATGAGATTATGTTTAAAATAAATGCATTGGTTCAACATGGTTGCATTCCATGGCCATTGATTGATACTAGTTTCTACCGGTTGGTTGATCCACGTAGAATAAGAATTGAATTTGTAGAACATGCCTTGGAAAAACTGTTCCATTTAAAGGAATGCAGCTATGAGCCATCAAGCTTTATTACTGAGCAGTACAGAAAGTATTCAAGACATCCTCCAAATTCTCCTGCTATATCCTTGGATGCCGGATTGGTATATGTCCGTCGAGTTCAAATAACACCTTGTAAGGTGTACTTTTGTGGTCCTGAAGTTAATGTCTCGAATCGAGTGTTGCGCCATTTTCCTCAAGATACTGATAATTTTCTTCGTGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCCACAGATTTATTGCCACGGATGTCTCCTACAAGCGAGGATAGTAAAACTGATATCTACAAAAGAATTCTCTCTGTTCTTAGAAATGGCATAGTCATTGGTGATAAAACCTTTCAGTTTCTTGCATTCTCATCAAGCCAATTAAGAGATAATTCTTTGTGGATGTTTGCTTCTAGACCGGGCCTTGATGCAGCTGATATTAGAGCATGGATGGGCGATTTTCGACATATCAAGAATCCAGCAAAGTATGCTGCTAGATTGGGCCAGTCATTCGGCTCATCGACGGAGACACTTTCGGTTGCTAGAGATGAAAGGGAAATTATTCCTGACATAGAGCTTCAACATGGAGAAGTCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAATGATTTCGCCAAAAAGGTCGCTGCAAAATGTGGTTTCCAAGGATCCACCCCATCTGCTTTTCAGATTCGTTATGGTGGATACAAGGGTGTTGTTGCTGTTGATCCGCACTCGTCTATAAAATTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACAAAACTTGACGTCTTAGGATATAGCAAATACCAGCCATGCTTCCTTAATCGTCAGCTGATTACTCTTTTGTCTACTTTAGGAGTTAGAGATGAAATTTTTGAGAACAAACAACGTGAAGCTGTAGAGCAATTGGATGCCATATTAACAGATCCATTGAAGGCTCGGGAAGCCTTAGAGTTGATGGCTCCTGGAGAGAATACTAATATTCTCAAGGAAATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCGTATCTATCAATGATGTTACAGACTTTCCGGGCATCAAAGTTGCTAGAATTACGTACCAAATCAAGAATCTTTATCCCGAATGGGAGAGCGATGATGGGATGTCTTGATGAGACTAGGACCTTGGAATATGGGCAGGTATTTGTGCAAATCTCCAGTGCTAGACGTCGAAATTTATCTGATTCCTTTGCATTTAATATGAGTGGCCCGGAACACCGTTTAGTTATTGAAGGAAATGTTACAGTTGCAAAAAATCCTTGCCTGCACCCTGGTGATGTTCGTGTATTAAAGGCTGTAAATATACCTTGGTTGTACCATTTGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCGAGGTTAGTACATTTACCAATGCTAGTTTTTTCTTGATTGGAAAATAAGTTGTGTTTTCAATTTTAAATGCAAGAAAGCCCCTTCAATATTCATTTTCAGAATATTGACATGTCAACATATATTTTCTAGAATATGTGTTGTGACAAATTGCTTGCATAATTTTGTTTTGAAGATTTTCCTCTAAAATAAATGTAACCAACCAGATGCTGAACTTGTTAATTTAGGCCTCATCCGAATGAATGCTCGGGTAGTGATTTAGATGGTGATATTTACTTTGTCTGTTGGGATACCGAATTGATCCCGCCTCGACAAATTCCGCCAATGGATTATACTCCTGCACCCCCTATTCAGTTAGATCGCGATGTCACAACTGAGGTATCTGCACACAAGCAATGACAAGTTTTGATCTTGATAACTCAAATCATGTTTTCTTTTTGAAACATATCACTTTTCCAGCGTTTTATCTCCGCCAATGAACTCCAATGTTTGTTTTATAAAAGACATTCACTTTGAACATTGCTTCTCATTAGAAGAGAAACCATTCATGCCTGTGTGTGTTTTTAGTCCTAATTTGAAACTATTGTTCTTTACAACAGGATATCCAAGAATATTTCGTTAACTACATGGTTAATGACAGTCTTGGAATCATTGCCAATGCACATACTGCCTTTGCAGATAAAGAGCCCTTTAAAGCAAGAGGTAGTCCTTGTGTGGAGCTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATTATACCTCCTCATTTATATGTCAAAGAGTTTCCTGACTTTATGGAGAAGCCTGACAAGCCCTCCTACGAATCAAAGAATGTGATTGGAAAGCTTTTCCGGGCTGTGAAAGACATTGCACCAACTTTGAGCTATATTAGGTCATTTACTCGAGATGTAGCAATGCAGTGTTACGACTCAGATATGGAAGTCGAAGGCTTTGAAGATTATGTTGGAGATGCATTCTATCATAAAAGCAATTATGATTACAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCGGAGGCCGAGATACTTAGTGGGAGTATTATGAGAATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCAATCAACTTGGCTGTAAGGTCTCTAAGAAAGGAGGCTAGGACATGGTTCAATGCAAGAGAAGGCGGATCGAATTCAGATTCAGATGATTTATTTGCCAAAGCTTCAGCTTGGTACCATGTCACATATCATCACTCATATTGGGGCTGTTATAATGAGGAAATGAAACGCGACCATTATTTGAGCTTCCCGTGGTGTGTCTACGACAAACTGATGCAAATCAAGGAGAAAAATTTGAGGAAAAGAGAGCGAGCTTTGAGACTGGCAACTCTCGACAGATTCGGACATGCGTTAAATCTTGGTGGGCATTGAAGAACATGATCGATACGGTTGGTTTCCTGTCATACCTCCTGTAGTTTTGTGAATATTCTTAGCTTTGAAGTATTGAACTAAGAGAGGAAACTTGATCATTTTTCGGGCTCTTGTTTATCGCCAGTGAAATGTAAATATTGTCTTCAACTGCTTGAGAGCTTTTGTAGGGAATGTTGTTTTTCTTTACCATGTAATATCCACAATAGCATGTACAAAGTTCATGAAATCTCAAATCTTAGTCACTTACTCTTCAACACTAGCTCATCCCCCTGCCAGCTTTTATTGTGTGTTAGATTCATATTGATTTCTGCAAATATCTCGTGGAGAATCTCGACCTTAGTTCCTGTAAAATTTAATGAAAACTTTGGTCAGAATGAAGAATTAAACAGAGACGAGGATGAGGAAGCGGGTTTGATTGGCCATGATAGGAGCATTAAGGTGATATCATATTAGGTTGTCTCGAACATTTTGTAATATTTGAGTTTTATCATATGGCATTGAGTCAATTTGATGTGACTTATGACTCCACAAATCTCTG

mRNA sequence

CAATAACGGTACCATAGAAGTAAAACTTAGCCACCAAGTTTTCTCTGTCATTTGCCCATAGAACAAGCGTCGCTTTGTCTTCGAATCCATAGTTCATCCCTCTTCTCTTGCAGTTGACTCTTCACACTCTCTCTGATATTATTCCTCTGATTTTTCACTGTTTTAAGGGCAAAATATACCTTTGGAAGTTTCTATAGTCATATTTTGTTCTTTCCCATTGTTTGGGAATGCTCCCTGCACACTAGAGCCATAATTCAAGTATAAGAGCATAGAAGTGAGGTTTTTTCTAATTTGTAGCTTCACTTGGTAAAGCAGGAAAAGACTGACAAAGTTCTTTGGAATCTTATGGGGAAAACAGTTCATATTAGTGGTTTTCCTTCAAATGTAACAGCAGATGCCGTTAAGAGTTTTCTGGAGGGTCGTACAGGTGTAGGAACTGTCTATGCTATTAAGGTTAGAGCACCTAAGAGAGGGGGAGCTAGAGTATATGCTATTGTTCAATTCACTAGTGCTACCCAAGCTGAGTTGATCATATCCTTAGCTAATCAAAGCCTATGGTACGGATCGTCTTATCTTAAGGCTCGAGCAGCCGAGGTTGATATTGTACCAAAGCCTAGGACATACATGTATACCTTGGAAGACTTGCCATTGTGCTTTGGGTGTCAGGTCTCAAGTGAAAAGTTTCGTGTTTTGTGGGAAGGAGATATTGATTTGGTGACTTTTGGAATTGGAATGCGAAAAATGAACTTCCATCTGAAACATAATTCTGTAAAGTATAGGCTTGAGCTTTCATACGAGAACATTTGGCAGATACAACTCCACCATCCACAACATCGATCTATGAAGTATCTTATCATCCAGTTATATGGAGCTCCTCGGATATATAAAAACGTTGCACCTTGTAGTGTACAAATCTTTGATGACCCACTTTTTAACTTTTTTATGGAAGTACCTGATGATCAATGGATTAGAACTGCTGATTTTACTCCATCATGCTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATCGCTGTCAACTTCCAAATTTTAGACAAAATTTTGCTTATTATGAAGAATTTGAAAATGAGTTCCAGTTGGTGGATGGAGATGCTAGTTTTTCTTTCTGTAGAGATCTTGCTCCTATTGTTGATTCTCGTCCTCATGTTCTGCCATATGAGATTATGTTTAAAATAAATGCATTGGTTCAACATGGTTGCATTCCATGGCCATTGATTGATACTAGTTTCTACCGGTTGGTTGATCCACGTAGAATAAGAATTGAATTTGTAGAACATGCCTTGGAAAAACTGTTCCATTTAAAGGAATGCAGCTATGAGCCATCAAGCTTTATTACTGAGCAGTACAGAAAGTATTCAAGACATCCTCCAAATTCTCCTGCTATATCCTTGGATGCCGGATTGGTATATGTCCGTCGAGTTCAAATAACACCTTGTAAGGTGTACTTTTGTGGTCCTGAAGTTAATGTCTCGAATCGAGTGTTGCGCCATTTTCCTCAAGATACTGATAATTTTCTTCGTGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCCACAGATTTATTGCCACGGATGTCTCCTACAAGCGAGGATAGTAAAACTGATATCTACAAAAGAATTCTCTCTGTTCTTAGAAATGGCATAGTCATTGGTGATAAAACCTTTCAGTTTCTTGCATTCTCATCAAGCCAATTAAGAGATAATTCTTTGTGGATGTTTGCTTCTAGACCGGGCCTTGATGCAGCTGATATTAGAGCATGGATGGGCGATTTTCGACATATCAAGAATCCAGCAAAGTATGCTGCTAGATTGGGCCAGTCATTCGGCTCATCGACGGAGACACTTTCGGTTGCTAGAGATGAAAGGGAAATTATTCCTGACATAGAGCTTCAACATGGAGAAGTCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAATGATTTCGCCAAAAAGGTCGCTGCAAAATGTGGTTTCCAAGGATCCACCCCATCTGCTTTTCAGATTCGTTATGGTGGATACAAGGGTGTTGTTGCTGTTGATCCGCACTCGTCTATAAAATTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACAAAACTTGACGTCTTAGGATATAGCAAATACCAGCCATGCTTCCTTAATCGTCAGCTGATTACTCTTTTGTCTACTTTAGGAGTTAGAGATGAAATTTTTGAGAACAAACAACGTGAAGCTGTAGAGCAATTGGATGCCATATTAACAGATCCATTGAAGGCTCGGGAAGCCTTAGAGTTGATGGCTCCTGGAGAGAATACTAATATTCTCAAGGAAATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCGTATCTATCAATGATGTTACAGACTTTCCGGGCATCAAAGTTGCTAGAATTACGTACCAAATCAAGAATCTTTATCCCGAATGGGAGAGCGATGATGGGATGTCTTGATGAGACTAGGACCTTGGAATATGGGCAGGTATTTGTGCAAATCTCCAGTGCTAGACGTCGAAATTTATCTGATTCCTTTGCATTTAATATGAGTGGCCCGGAACACCGTTTAGTTATTGAAGGAAATGTTACAGTTGCAAAAAATCCTTGCCTGCACCCTGGTGATGTTCGTGTATTAAAGGCTGTAAATATACCTTGGTTGTACCATTTGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCGAGGCCTCATCCGAATGAATGCTCGGGTAGTGATTTAGATGGTGATATTTACTTTGTCTGTTGGGATACCGAATTGATCCCGCCTCGACAAATTCCGCCAATGGATTATACTCCTGCACCCCCTATTCAGTTAGATCGCGATGTCACAACTGAGGATATCCAAGAATATTTCGTTAACTACATGGTTAATGACAGTCTTGGAATCATTGCCAATGCACATACTGCCTTTGCAGATAAAGAGCCCTTTAAAGCAAGAGGTAGTCCTTGTGTGGAGCTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATTATACCTCCTCATTTATATGTCAAAGAGTTTCCTGACTTTATGGAGAAGCCTGACAAGCCCTCCTACGAATCAAAGAATGTGATTGGAAAGCTTTTCCGGGCTGTGAAAGACATTGCACCAACTTTGAGCTATATTAGGTCATTTACTCGAGATGTAGCAATGCAGTGTTACGACTCAGATATGGAAGTCGAAGGCTTTGAAGATTATGTTGGAGATGCATTCTATCATAAAAGCAATTATGATTACAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCGGAGGCCGAGATACTTAGTGGGAGTATTATGAGAATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCAATCAACTTGGCTGTAAGGTCTCTAAGAAAGGAGGCTAGGACATGGTTCAATGCAAGAGAAGGCGGATCGAATTCAGATTCAGATGATTTATTTGCCAAAGCTTCAGCTTGGTACCATGTCACATATCATCACTCATATTGGGGCTGTTATAATGAGGAAATGAAACGCGACCATTATTTGAGCTTCCCGTGGTGTGTCTACGACAAACTGATGCAAATCAAGGAGAAAAATTTGAGGAAAAGAGAGCGAGCTTTGAGACTGGCAACTCTCGACAGATTCGGACATGCGTTAAATCTTGGTGGGCATTGAAGAACATGATCGATACGGTTGGTTTCCTGTCATACCTCCTGTAGTTTTGTGAATATTCTTAGCTTTGAAGTATTGAACTAAGAGAGGAAACTTGATCATTTTTCGGGCTCTTGTTTATCGCCAGTGAAATGTAAATATTGTCTTCAACTGCTTGAGAGCTTTTGTAGGGAATGTTGTTTTTCTTTACCATGTAATATCCACAATAGCATGTACAAAGTTCATGAAATCTCAAATCTTAGTCACTTACTCTTCAACACTAGCTCATCCCCCTGCCAGCTTTTATTGTGTGTTAGATTCATATTGATTTCTGCAAATATCTCGTGGAGAATCTCGACCTTAGTTCCTGTAAAATTTAATGAAAACTTTGGTCAGAATGAAGAATTAAACAGAGACGAGGATGAGGAAGCGGGTTTGATTGGCCATGATAGGAGCATTAAGGTGATATCATATTAGGTTGTCTCGAACATTTTGTAATATTTGAGTTTTATCATATGGCATTGAGTCAATTTGATGTGACTTATGACTCCACAAATCTCTG

Coding sequence (CDS)

ATGGGGAAAACAGTTCATATTAGTGGTTTTCCTTCAAATGTAACAGCAGATGCCGTTAAGAGTTTTCTGGAGGGTCGTACAGGTGTAGGAACTGTCTATGCTATTAAGGTTAGAGCACCTAAGAGAGGGGGAGCTAGAGTATATGCTATTGTTCAATTCACTAGTGCTACCCAAGCTGAGTTGATCATATCCTTAGCTAATCAAAGCCTATGGTACGGATCGTCTTATCTTAAGGCTCGAGCAGCCGAGGTTGATATTGTACCAAAGCCTAGGACATACATGTATACCTTGGAAGACTTGCCATTGTGCTTTGGGTGTCAGGTCTCAAGTGAAAAGTTTCGTGTTTTGTGGGAAGGAGATATTGATTTGGTGACTTTTGGAATTGGAATGCGAAAAATGAACTTCCATCTGAAACATAATTCTGTAAAGTATAGGCTTGAGCTTTCATACGAGAACATTTGGCAGATACAACTCCACCATCCACAACATCGATCTATGAAGTATCTTATCATCCAGTTATATGGAGCTCCTCGGATATATAAAAACGTTGCACCTTGTAGTGTACAAATCTTTGATGACCCACTTTTTAACTTTTTTATGGAAGTACCTGATGATCAATGGATTAGAACTGCTGATTTTACTCCATCATGCTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATCGCTGTCAACTTCCAAATTTTAGACAAAATTTTGCTTATTATGAAGAATTTGAAAATGAGTTCCAGTTGGTGGATGGAGATGCTAGTTTTTCTTTCTGTAGAGATCTTGCTCCTATTGTTGATTCTCGTCCTCATGTTCTGCCATATGAGATTATGTTTAAAATAAATGCATTGGTTCAACATGGTTGCATTCCATGGCCATTGATTGATACTAGTTTCTACCGGTTGGTTGATCCACGTAGAATAAGAATTGAATTTGTAGAACATGCCTTGGAAAAACTGTTCCATTTAAAGGAATGCAGCTATGAGCCATCAAGCTTTATTACTGAGCAGTACAGAAAGTATTCAAGACATCCTCCAAATTCTCCTGCTATATCCTTGGATGCCGGATTGGTATATGTCCGTCGAGTTCAAATAACACCTTGTAAGGTGTACTTTTGTGGTCCTGAAGTTAATGTCTCGAATCGAGTGTTGCGCCATTTTCCTCAAGATACTGATAATTTTCTTCGTGTGTCTTTTGTTGATGAGGAGTGGGATAAAATGCGTTCCACAGATTTATTGCCACGGATGTCTCCTACAAGCGAGGATAGTAAAACTGATATCTACAAAAGAATTCTCTCTGTTCTTAGAAATGGCATAGTCATTGGTGATAAAACCTTTCAGTTTCTTGCATTCTCATCAAGCCAATTAAGAGATAATTCTTTGTGGATGTTTGCTTCTAGACCGGGCCTTGATGCAGCTGATATTAGAGCATGGATGGGCGATTTTCGACATATCAAGAATCCAGCAAAGTATGCTGCTAGATTGGGCCAGTCATTCGGCTCATCGACGGAGACACTTTCGGTTGCTAGAGATGAAAGGGAAATTATTCCTGACATAGAGCTTCAACATGGAGAAGTCAAGTATGTCTTTTCTGATGGAATTGGAAAAATATCAAATGATTTCGCCAAAAAGGTCGCTGCAAAATGTGGTTTCCAAGGATCCACCCCATCTGCTTTTCAGATTCGTTATGGTGGATACAAGGGTGTTGTTGCTGTTGATCCGCACTCGTCTATAAAATTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACAAAACTTGACGTCTTAGGATATAGCAAATACCAGCCATGCTTCCTTAATCGTCAGCTGATTACTCTTTTGTCTACTTTAGGAGTTAGAGATGAAATTTTTGAGAACAAACAACGTGAAGCTGTAGAGCAATTGGATGCCATATTAACAGATCCATTGAAGGCTCGGGAAGCCTTAGAGTTGATGGCTCCTGGAGAGAATACTAATATTCTCAAGGAAATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCGTATCTATCAATGATGTTACAGACTTTCCGGGCATCAAAGTTGCTAGAATTACGTACCAAATCAAGAATCTTTATCCCGAATGGGAGAGCGATGATGGGATGTCTTGATGAGACTAGGACCTTGGAATATGGGCAGGTATTTGTGCAAATCTCCAGTGCTAGACGTCGAAATTTATCTGATTCCTTTGCATTTAATATGAGTGGCCCGGAACACCGTTTAGTTATTGAAGGAAATGTTACAGTTGCAAAAAATCCTTGCCTGCACCCTGGTGATGTTCGTGTATTAAAGGCTGTAAATATACCTTGGTTGTACCATTTGGTTGACTGTGTAGTTTTTCCTCAAAAAGGATCGAGGCCTCATCCGAATGAATGCTCGGGTAGTGATTTAGATGGTGATATTTACTTTGTCTGTTGGGATACCGAATTGATCCCGCCTCGACAAATTCCGCCAATGGATTATACTCCTGCACCCCCTATTCAGTTAGATCGCGATGTCACAACTGAGGATATCCAAGAATATTTCGTTAACTACATGGTTAATGACAGTCTTGGAATCATTGCCAATGCACATACTGCCTTTGCAGATAAAGAGCCCTTTAAAGCAAGAGGTAGTCCTTGTGTGGAGCTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCAGCTATTATACCTCCTCATTTATATGTCAAAGAGTTTCCTGACTTTATGGAGAAGCCTGACAAGCCCTCCTACGAATCAAAGAATGTGATTGGAAAGCTTTTCCGGGCTGTGAAAGACATTGCACCAACTTTGAGCTATATTAGGTCATTTACTCGAGATGTAGCAATGCAGTGTTACGACTCAGATATGGAAGTCGAAGGCTTTGAAGATTATGTTGGAGATGCATTCTATCATAAAAGCAATTATGATTACAAGTTGGGGAATTTGCTCGATTATTACGGGATCAAGTCGGAGGCCGAGATACTTAGTGGGAGTATTATGAGAATGTCCAAGTCTTTCACCAGGAGAAGAGATGCAGAAGCAATCAACTTGGCTGTAAGGTCTCTAAGAAAGGAGGCTAGGACATGGTTCAATGCAAGAGAAGGCGGATCGAATTCAGATTCAGATGATTTATTTGCCAAAGCTTCAGCTTGGTACCATGTCACATATCATCACTCATATTGGGGCTGTTATAATGAGGAAATGAAACGCGACCATTATTTGAGCTTCCCGTGGTGTGTCTACGACAAACTGATGCAAATCAAGGAGAAAAATTTGAGGAAAAGAGAGCGAGCTTTGAGACTGGCAACTCTCGACAGATTCGGACATGCGTTAAATCTTGGTGGGCATTGA

Protein sequence

MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAELIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGDIDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIYKNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQNFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLIDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDLLPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDAADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSDGIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFSIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGGH
Homology
[Close]
BLAST of Bhi07G000388 vs. Swiss-Prot
Match: sp|Q9LQV2|RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1442.2 bits (3732), Expect = 0.0e+00
Identity = 726/1133 (64.08%), Postives = 860/1133 (75.90%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+ + GFP+ V+A+ VK FLE  TG GTVYAIKVR PK+GG RVYAIVQFTS     
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LII+ A + L+YG SYLKA   E DIVPKPR  ++T+  L + FGCQVS++KF  LW   
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
               V+FGIGMRK++F        YRLELSYENIWQI LH PQ RS K+L+IQ+ GAP+I+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            +        +F   + +F+ +  D+QWIRT DFT S  IGQS++ CL+LP    +P+FR+
Sbjct: 181  EKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240

Query: 241  NFAYYEEFENEFQLVDGDASFSF-CRDLAPIVDSRP-HVLPYEIMFKINALVQHGCIPWP 300
            NFA Y E      L++  +S+S     L P+VD  P   LP+EI+FK+N LVQ+ C+  P
Sbjct: 241  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300

Query: 301  LIDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKY--SRHPPNSPAI 360
             +D  FYRL++ ++     ++H LEKLFHL EC YEP+ ++ ++Y+K+      P SP I
Sbjct: 301  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTI 360

Query: 361  SLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTD 420
            SLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+ +  +NFLRVSFVDE+ +K+RS D
Sbjct: 361  SLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMD 420

Query: 421  LLPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLD 480
            L PR   +S   +T +Y RI SVLR+GIVIGDK F+FLAFSSSQLR+NS WMFA    + 
Sbjct: 421  LSPR---SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRIT 480

Query: 481  AADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFS 540
            AA IRAWMGDF HI+N AKYAARLGQSF SS ETL+V  DE E+IPD+E+     +YVFS
Sbjct: 481  AAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFS 540

Query: 541  DGIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFES 600
            DGIGKIS +FA+KVA KCG    +PSAFQIRYGGYKGVVAVDP+SS KLSLRKSM KFES
Sbjct: 541  DGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFES 600

Query: 601  DNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREA 660
            +NTKLDVL +SKYQPC++NRQLITLLSTLGV D +FE KQRE V++LDAILT PL+A EA
Sbjct: 601  ENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEA 660

Query: 661  LELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMG 720
            L LMAPGENTNILK ++ CGYKPD EP+LSMMLQ FRASKLLELRTK+RIFI  GR+MMG
Sbjct: 661  LGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMG 720

Query: 721  CLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVR 780
            CLDETRTLEYGQV VQ S   R             P  R +I G V VAKNPCLHPGDVR
Sbjct: 721  CLDETRTLEYGQVVVQYSDPMR-------------PGRRFIITGPVVVAKNPCLHPGDVR 780

Query: 781  VLKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDY 840
            VL+AVN+P L H+VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR   PMDY
Sbjct: 781  VLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDY 840

Query: 841  TPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLF 900
            TP P   LD DVT E+++EYF NY+VNDSLGIIANAHTAFADKEP KA   PC+ELAK F
Sbjct: 841  TPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKF 900

Query: 901  SIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIR 960
            S AVDFPKTGV A+IP HLYVKE+PDFMEKPDKP+YESKNVIGKLFR VK+ AP L  I+
Sbjct: 901  STAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIK 960

Query: 961  SFTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMR 1020
            SFT DVA + YD DMEV+GFE+YV +AFY K+NYD+KLGNL+DYYGIK+EAEILSG IMR
Sbjct: 961  SFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMR 1020

Query: 1021 MSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYW 1080
            MSKSFT+RRDAE+I  AVR+LRKE  + FNA E   N       AKASAWYHVTYH SYW
Sbjct: 1021 MSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENES-----AKASAWYHVTYHSSYW 1080

Query: 1081 GCYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLG 1130
            G YNE + RDH+LSF WCVYDKL++IK+ NL +R+R     TL+R  H L  G
Sbjct: 1081 GLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQ---ETLERLDHVLRFG 1107

[Close]
BLAST of Bhi07G000388 vs. Swiss-Prot
Match: sp|Q0DXS3|RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 974.9 bits (2519), Expect = 7.5e-283
Identity = 482/746 (64.61%), Postives = 583/746 (78.15%), Query Frame = 0 

Query: 375  VYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDLLPRMSPTSEDSKTDIYK 434
            VYF GPE+NVSNRV+R+F  D +NFLR+SFVDE+ +K+R+TDL PR +   + ++T +YK
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 435  RILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDAADIRAWMGDFRHIKNPA 494
            R+LSVL +GI IG K F+FLAFSSSQLRDNS WMFASR GL A+DIR WMGDFR+I+N A
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 495  KYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSDGIGKISNDFAKKVAAKC 554
            KYAARLGQSF SSTETL V + E E I DI+      ++VFSDGIGKIS+ FA +VA KC
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKC 188

Query: 555  GFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESDNTKLDVLGYSKYQPCFL 614
              +   PSAFQIRYGGYKGVVAVDP S  KLSLRKSM KF+SDN  +DVL YSKYQP FL
Sbjct: 189  NLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFL 248

Query: 615  NRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALELMAPGENTNILKEMLK 674
            NRQLITLLSTLGVRD +FE KQ EAV QL+ ++TDP  A EA+ELM  GE TN +KE+L 
Sbjct: 249  NRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLL 308

Query: 675  CGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVFVQIS 734
            CGY+PD EPYLSM+LQTFRASKLLEL+TKSRI IP GRAMMGCLDETRTL+YGQVF++ +
Sbjct: 309  CGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRAT 368

Query: 735  SARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLKAVNIPWLYHLVDCVV 794
            S    N              R  + G V +AKNPCLHPGD+R+L AV++P L+H+ +CVV
Sbjct: 369  SGVNDN-------------DRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVV 428

Query: 795  FPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPAPPIQLDRDVTTEDIQ 854
            FPQ+G RPHPNECSGSDLDGDIYFV WD  LIPPR + PMDYTPAP   LD DVT E+++
Sbjct: 429  FPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVE 488

Query: 855  EYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFSIAVDFPKTGVPAIIPPH 914
            EYF NY+VN+SLG+IANAH  FADKE  KA  SPC+ELAKLFSIAVDFPKTGVPA+IPP 
Sbjct: 489  EYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPE 548

Query: 915  LYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFTRDVAMQCYDSDMEVE 974
            L+VKE+PDFMEK DK +YESK VIGKL+R +K   P   +I+ FTR+VA + YD+DM V+
Sbjct: 549  LHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTP---HIKHFTREVARRSYDTDMIVD 608

Query: 975  GFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRDAEAINLAV 1034
            G+EDY+ +A   K  YD+KLGNL+D+YGIKSEAEI+SG I++M+K+FT++ DA+AI LAV
Sbjct: 609  GYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAV 668

Query: 1035 RSLRKEARTWFNAREGGSNSDSDDLF-AKASAWYHVTYHHSYWGCYNEEMKRDHYLSFPW 1094
            RSLRKEAR+ F+      N    D   AKASAWYHVTYH  +WGCYNE  +R H++SFPW
Sbjct: 669  RSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPW 728

Query: 1095 CVYDKLMQIKEKNLRKRERALRLATL 1120
            C+Y+KL++IK++    R+    L +L
Sbjct: 729  CIYEKLLRIKQRRKFVRKMQPELFSL 735

[Close]
BLAST of Bhi07G000388 vs. Swiss-Prot
Match: sp|O82504|RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 1.8e-215
Identity = 447/1131 (39.52%), Postives = 649/1131 (57.38%), Query Frame = 0 

Query: 4    TVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPK-RGGARVYAIVQFTSATQAELI 63
            TV IS  P  + AD +  FLE   G  TV+A+++   +     R +A VQFT+       
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   ISLANQS-LWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEK-FRVLWEGD 123
              L++QS L + +  L+   A  DI+P+P      L+D+ L  G   S EK F  L + D
Sbjct: 71   QLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWD 130

Query: 124  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQ--LHHPQHRSMKYLIIQLYGAPR 183
                      R++ F +  +   Y++E+ +E+I +      +     +   +++L   P+
Sbjct: 131  GVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPK 190

Query: 184  IYKNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNF 243
            ++K V       F    + F  E  D  WIRT DF+ S SIG S+  CL++ N   + + 
Sbjct: 191  VFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDI 250

Query: 244  RQNFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVL--PYEIMFKINALVQHGCIP 303
                 YY E       VDG  +F+    + P++++    L  PYEI+F++NALV    I 
Sbjct: 251  FSGLPYYREDTLSLTYVDG-KTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKIS 310

Query: 304  -WPLIDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPA 363
             +   D    +++  R + +E     L+KL       Y+P  F+  Q +   +   +SPA
Sbjct: 311  LFAASDMELIKIL--RGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPA 370

Query: 364  IS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDK 423
             +     +  ++  +R  +TP K+Y  GPE+  +N V+++F +   +F+RV+FV+E+W K
Sbjct: 371  SAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSK 430

Query: 424  MRSTDLL--PRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMF 483
            + +  L    +     + S+T+IY R+LS+L  GI +G K F+FLAFS+SQLR NS+WMF
Sbjct: 431  LPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMF 490

Query: 484  ASRPGLDAADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHG 543
            AS   + A DIR WMG FR I++ +K AAR+GQ F +S +TL V   + E IPDIE+   
Sbjct: 491  ASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD 550

Query: 544  EVKYVFSDGIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRK 603
               Y FSDGIGKIS  FAK+VA KCG     PSAFQIRYGGYKGV+AVD  S  KLSLR 
Sbjct: 551  GADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRD 610

Query: 604  SMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTD 663
            SM KF+S+N  L+V  +++  PCFLNR++I LLSTLG+ D +FE  Q   +  L  +L D
Sbjct: 611  SMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLED 670

Query: 664  PLKAREALELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIP 723
               A   L+ ++   + N+L +ML  GY P  EPYLSMML+    S+L EL+++ RI +P
Sbjct: 671  RDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVP 730

Query: 724  NGRAMMGCLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPC 783
             GR ++GC+DE   LEYGQV+V+++  +    S   ++     E   V+ G V V KNPC
Sbjct: 731  KGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPC 790

Query: 784  LHPGDVRVLKAVNIPWLYHL-----VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTE 843
            LHPGD+RVL A+   +  H      +DC++FPQKG RPHPNECSG DLDGD +FV WD +
Sbjct: 791  LHPGDIRVLDAI---YEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEK 850

Query: 844  LIPPRQIPPMDYTPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKA 903
            +IP    PPMDY  + P  +D DVT E+I ++FV+YM++D+LG+I+ AH   AD++P KA
Sbjct: 851  IIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKA 910

Query: 904  RGSPCVELAKLFSIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRA 963
            R   C+ELA L S AVDF KTG PA +P  L  +EFPDF+E+ +KP+Y S++V GKL+RA
Sbjct: 911  RSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRA 970

Query: 964  VKDIAPTLSYIRSFTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIK 1023
            VK    +L+  +          YD  +E  GFE ++  A  H+  Y  KL +L+ YYG  
Sbjct: 971  VKS---SLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAA 1030

Query: 1024 SEAEILSGSI----MRMSKSFTRRRD-AEAINLAVRSLRKEARTWFNAREGGSNSDSDDL 1083
            +E EIL+G +    M +++   R  D  + I L+V+ L KEA  WF      S  D    
Sbjct: 1031 NEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK----SCEDEQQK 1090

Query: 1084 FAKASAWYHVTYHHSYWGCYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKR 1111
               ASAWY+VTY+       N   ++  +LSFPW V D L+ IK +N +++
Sbjct: 1091 KKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQ 1121

[Close]
BLAST of Bhi07G000388 vs. Swiss-Prot
Match: sp|Q7XM31|RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 5.3e-212
Identity = 439/1129 (38.88%), Postives = 651/1129 (57.66%), Query Frame = 0 

Query: 4    TVHISGFPSNVTADAVKSFLEGRTGV-GTVYAIKVRAPKRGG-ARVYAIVQFTSATQAEL 63
            ++ +S  P +  A  + +F +    V G  +A ++ A  RG  +R +  VQF SA     
Sbjct: 11   SLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAXXXXX 70

Query: 64   IISLANQSLW--YGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRV--LW 123
               LA+      +  + L    + VD++P+            L  G +V+   F     W
Sbjct: 71   XXXLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAW 130

Query: 124  EGDIDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAP 183
            +G    V    G R+++ +L+H+S +Y+LE+ +E++            M  +++QL  AP
Sbjct: 131  DGVRAEVI--PGKRRVDLYLEHDSQRYKLEVLFEDMKDCL--GCTLDGMGAILLQLNYAP 190

Query: 184  RIYKNVA-PCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLP 243
            RI+  ++ P     F D  F+   E     W+R  DFTP+ S G+ S+L LKL     + 
Sbjct: 191  RIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVS 250

Query: 244  NFRQNFAYYEEF-ENEFQLVDGDASFSFCRDLAPIVD-SRPHVLPYEIMFKINALVQHGC 303
            +  ++  +     E     +DG  + S   ++ P+V   R + +PYE++F++N+L+  G 
Sbjct: 251  DILKSLPFSGNLGELTMNSMDGVGASS---NVVPLVHCPRDYSVPYEVLFRLNSLMHMGK 310

Query: 304  IPWPLIDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSP 363
            I    ++   ++ +  + + ++      EK+  L+   Y P  FI  Q   YS    ++ 
Sbjct: 311  IVAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFI--QQEAYSMKRSHNV 370

Query: 364  AISLDA------GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEE 423
             +S +        L+   RV ITP K++  GPE  V+N V++H      +F+RV+FVDE+
Sbjct: 371  LLSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDED 430

Query: 424  WDKMRSTDLLPRMSP--TSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSL 483
            W K+ S  +  R+     S+  KT +Y RILS+L+ G  IG K F+FLAFS+SQLR NS+
Sbjct: 431  WSKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSV 490

Query: 484  WMFASRPGLDAADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIEL 543
            WMFAS   L+A  IR WMG F +I++ +K AAR+GQ F SS +T  V R + E+IPDIE+
Sbjct: 491  WMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEI 550

Query: 544  QHGEVKYVFSDGIGKISNDFAKKVAAKCGFQGST-PSAFQIRYGGYKGVVAVDPHSSIKL 603
                 KY+FSDGIGKIS  FAK+VA   G   +  PSAFQIRYGGYKGV+A+DP SSI L
Sbjct: 551  TTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDL 610

Query: 604  SLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDA 663
            SLR SM KFES++  L++  +SK QPC++NR++I+LLSTLG+RDEIF   Q++ + + + 
Sbjct: 611  SLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEE 670

Query: 664  ILTDPLKAREALELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSR 723
            +LT+   A   L  +  G  T    +ML  GY+P  EPYLSM+L+  + ++L ++RT+ +
Sbjct: 671  MLTNKEVALSVLGKLG-GSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCK 730

Query: 724  IFIPNGRAMMGCLDETRTLEYGQVFVQI--SSARRRNLSDSFAFNMSGPEHRLVIEGNVT 783
            I +P GR ++GCLDET  LEYGQV+++I  +S  +++ + S+ +N  G    +V  G V 
Sbjct: 731  IHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV--GKVA 790

Query: 784  VAKNPCLHPGDVRVLKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDT 843
            + KNPCLHPGD+RVL+A+  P L  +VDC+VFPQ+G RPHPNECSG DLDGD+YF+ WD 
Sbjct: 791  ITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDD 850

Query: 844  ELIPPRQIPPMDYTPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFK 903
            +LIP +   PMDYT   P  +D  VT E+IQ++FV+YM+NDSLG I+ AH   AD+ P K
Sbjct: 851  KLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLK 910

Query: 904  ARGSPCVELAKLFSIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFR 963
            AR   C++LA L S+AVDF KTG PA +P  L  +E+PDFME+ +KP Y S  V+GKL+R
Sbjct: 911  ARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYR 970

Query: 964  AVKDIAPTLSYIRSFTRDVAM--QCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYY 1023
            +            + +   A     YD D+EV G ++++  A  +   Y+ KL  L++YY
Sbjct: 971  SAMGHMEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYY 1030

Query: 1024 GIKSEAEILSGSIMRMSKSFTRRRD-------AEAINLAVRSLRKEARTWFNAREGGSNS 1083
              + E EIL+G+I   +K    +RD        + I  AV +L +EAR W       S+ 
Sbjct: 1031 RAELEDEILTGNI--RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLL-----SSR 1090

Query: 1084 DSDDLFAKASAWYHVTYHHSYWGCYNEEMKRDHYLSFPWCVYDKLMQIK 1104
              +D    ASAWY VTYH        +  +   + SFPW   D L+ IK
Sbjct: 1091 KEEDASRMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAIK 1111

[Close]
BLAST of Bhi07G000388 vs. Swiss-Prot
Match: sp|Q9SG02|RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 9.8e-166
Identity = 400/1086 (36.83%), Postives = 571/1086 (52.58%), Query Frame = 0 

Query: 92   TYMYTLEDLPLCFGCQVSSEKFRVLWEGD-IDLV------TFGIGMRKMNFHLKHNSV-- 151
            T  Y L  + L  G  VS + F V W  + +D +      T     RK       ++V  
Sbjct: 127  TVPYKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMH 186

Query: 152  -----KYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIYKNVAPCSVQIFDDPLFN 211
                  Y+LEL   +I  ++ +   H  +  LI+QL  +PR++   A       DD +++
Sbjct: 187  AVINCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTA-------DDDIYD 246

Query: 212  FFMEVP------DDQWIRTADFTPSCSIGQSSSLCLKLPNRCQ------LPNFRQNFAYY 271
                VP      DD WIRT DFT   +IG+  S  + +  R +      L  FR      
Sbjct: 247  ---TVPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQE 306

Query: 272  E------EFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPL 331
            E         NE    +  +   FC             + +EIMF +N+++  G      
Sbjct: 307  ERVRWPPRIRNEPCFGEPVSDHFFC-------IHHKEGISFEIMFLVNSVLHRGVFNQFQ 366

Query: 332  IDTSFYRLV--DPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRK-----YSRHPPN 391
            +   F+ L+   P+ + I  ++H          C+Y+   F   +  K       ++P  
Sbjct: 367  LTERFFDLLRNQPKDVNIASLKHL---------CTYKRPVFDAYKRLKLVQEWIQKNPKL 426

Query: 392  SPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKM 451
              +      +  +RR+ ITP + Y   PEV +SNRVLR +    + FLRV+F+DE    +
Sbjct: 427  LGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTI 486

Query: 452  RSTDLLPRMSPTSED-------SKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNS 511
             S  L   ++P  +D        KT ++KR+ S+L +G  +  + + FLAFS++QLRD S
Sbjct: 487  NSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRS 546

Query: 512  LWMFASRPGLDAADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREI-IPDI 571
             W FA       +DI+ WMG F+  KN AK AAR+G  F S+  T+ V   E +  +PDI
Sbjct: 547  AWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDI 606

Query: 572  ELQHGEVKYVFSDGIGKISNDFAKKVAAKCGFQ-GSTPSAFQIRYGGYKGVVAVDPHSS- 631
            E ++G   YVFSDGIG I+ D A +V  K       +P A+QIRY G+KGVVA  P  S 
Sbjct: 607  E-RNG---YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSD 666

Query: 632  -IKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVE 691
             I+L+LR SM KF S +T L++  ++++QP FLNRQ+ITLLS LGV DEIF + Q   + 
Sbjct: 667  GIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLY 726

Query: 692  QLDAILTDPLKAREALELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELR 751
            +L+ IL D   A E L      E  N    ML  G+KP  EP+L  ML + R ++L  LR
Sbjct: 727  KLNRILDDTDVAFEVLTASC-AEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLR 786

Query: 752  TKSRIFIPNGRAMMGCLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRL-VIEG 811
             KSRIF+ +GR +MGCLDE   LE+GQ F+Q+S     N            +  L V++G
Sbjct: 787  EKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKG 846

Query: 812  NVTVAKNPCLHPGDVRVLKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVC 871
             V +AKNPCLHPGDVR+L+AV++P L+H+ DC++FPQKG RPH NE SGSDLDGD+YFV 
Sbjct: 847  YVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVA 906

Query: 872  WDTELIPP--RQIPPMDYTPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFAD 931
            WD +LIPP  +  P M Y  A    L R V  +DI ++F   + N+ LG I NAH   AD
Sbjct: 907  WDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHAD 966

Query: 932  KEPFKARGSPCVELAKLFSIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVI 991
            +  + A    C+ LA+L + AVDFPKTG    +P HL  K +PDFM K D  +Y+S  ++
Sbjct: 967  RSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKIL 1026

Query: 992  GKLFRAVKDIAPTLSYIRS-FTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNL 1051
            G+L+R VK++    +   S  + D +   YD+ +E+ GFED + +A+ HK  YD +L  L
Sbjct: 1027 GRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGL 1086

Query: 1052 LDYYGIKSEAEILSGSIMRMSKSFTRRRD--AEAINLAVRSLRKEARTWFNA----REGG 1111
            L  Y ++ E EI++G I  M K  ++++    E +  +  SL+KE R  F       E  
Sbjct: 1087 LGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENL 1146

[Close]
BLAST of Bhi07G000388 vs. TAIR10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1)

HSP 1 Score: 1442.2 bits (3732), Expect = 0.0e+00
Identity = 726/1133 (64.08%), Postives = 860/1133 (75.90%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+ + GFP+ V+A+ VK FLE  TG GTVYAIKVR PK+GG RVYAIVQFTS     
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LII+ A + L+YG SYLKA   E DIVPKPR  ++T+  L + FGCQVS++KF  LW   
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
               V+FGIGMRK++F        YRLELSYENIWQI LH PQ RS K+L+IQ+ GAP+I+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            +        +F   + +F+ +  D+QWIRT DFT S  IGQS++ CL+LP    +P+FR+
Sbjct: 181  EKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240

Query: 241  NFAYYEEFENEFQLVDGDASFSF-CRDLAPIVDSRP-HVLPYEIMFKINALVQHGCIPWP 300
            NFA Y E      L++  +S+S     L P+VD  P   LP+EI+FK+N LVQ+ C+  P
Sbjct: 241  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300

Query: 301  LIDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKY--SRHPPNSPAI 360
             +D  FYRL++ ++     ++H LEKLFHL EC YEP+ ++ ++Y+K+      P SP I
Sbjct: 301  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTI 360

Query: 361  SLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTD 420
            SLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+ +  +NFLRVSFVDE+ +K+RS D
Sbjct: 361  SLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMD 420

Query: 421  LLPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLD 480
            L PR   +S   +T +Y RI SVLR+GIVIGDK F+FLAFSSSQLR+NS WMFA    + 
Sbjct: 421  LSPR---SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRIT 480

Query: 481  AADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFS 540
            AA IRAWMGDF HI+N AKYAARLGQSF SS ETL+V  DE E+IPD+E+     +YVFS
Sbjct: 481  AAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFS 540

Query: 541  DGIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFES 600
            DGIGKIS +FA+KVA KCG    +PSAFQIRYGGYKGVVAVDP+SS KLSLRKSM KFES
Sbjct: 541  DGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFES 600

Query: 601  DNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREA 660
            +NTKLDVL +SKYQPC++NRQLITLLSTLGV D +FE KQRE V++LDAILT PL+A EA
Sbjct: 601  ENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEA 660

Query: 661  LELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMG 720
            L LMAPGENTNILK ++ CGYKPD EP+LSMMLQ FRASKLLELRTK+RIFI  GR+MMG
Sbjct: 661  LGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMG 720

Query: 721  CLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVR 780
            CLDETRTLEYGQV VQ S   R             P  R +I G V VAKNPCLHPGDVR
Sbjct: 721  CLDETRTLEYGQVVVQYSDPMR-------------PGRRFIITGPVVVAKNPCLHPGDVR 780

Query: 781  VLKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDY 840
            VL+AVN+P L H+VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR   PMDY
Sbjct: 781  VLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDY 840

Query: 841  TPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLF 900
            TP P   LD DVT E+++EYF NY+VNDSLGIIANAHTAFADKEP KA   PC+ELAK F
Sbjct: 841  TPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKF 900

Query: 901  SIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIR 960
            S AVDFPKTGV A+IP HLYVKE+PDFMEKPDKP+YESKNVIGKLFR VK+ AP L  I+
Sbjct: 901  STAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIK 960

Query: 961  SFTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMR 1020
            SFT DVA + YD DMEV+GFE+YV +AFY K+NYD+KLGNL+DYYGIK+EAEILSG IMR
Sbjct: 961  SFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMR 1020

Query: 1021 MSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYW 1080
            MSKSFT+RRDAE+I  AVR+LRKE  + FNA E   N       AKASAWYHVTYH SYW
Sbjct: 1021 MSKSFTKRRDAESIGRAVRALRKETLSLFNASEEEENES-----AKASAWYHVTYHSSYW 1080

Query: 1081 GCYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLG 1130
            G YNE + RDH+LSF WCVYDKL++IK+ NL +R+R     TL+R  H L  G
Sbjct: 1081 GLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQ---ETLERLDHVLRFG 1107

[Close]
BLAST of Bhi07G000388 vs. TAIR10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2)

HSP 1 Score: 751.1 bits (1938), Expect = 9.7e-217
Identity = 447/1131 (39.52%), Postives = 649/1131 (57.38%), Query Frame = 0 

Query: 4    TVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPK-RGGARVYAIVQFTSATQAELI 63
            TV IS  P  + AD +  FLE   G  TV+A+++   +     R +A VQFT+       
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKSRA 70

Query: 64   ISLANQS-LWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEK-FRVLWEGD 123
              L++QS L + +  L+   A  DI+P+P      L+D+ L  G   S EK F  L + D
Sbjct: 71   QLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKWD 130

Query: 124  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQ--LHHPQHRSMKYLIIQLYGAPR 183
                      R++ F +  +   Y++E+ +E+I +      +     +   +++L   P+
Sbjct: 131  GVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYGPK 190

Query: 184  IYKNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNF 243
            ++K V       F    + F  E  D  WIRT DF+ S SIG S+  CL++ N   + + 
Sbjct: 191  VFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDI 250

Query: 244  RQNFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVL--PYEIMFKINALVQHGCIP 303
                 YY E       VDG  +F+    + P++++    L  PYEI+F++NALV    I 
Sbjct: 251  FSGLPYYREDTLSLTYVDG-KTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQKIS 310

Query: 304  -WPLIDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPA 363
             +   D    +++  R + +E     L+KL       Y+P  F+  Q +   +   +SPA
Sbjct: 311  LFAASDMELIKIL--RGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPA 370

Query: 364  IS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDK 423
             +     +  ++  +R  +TP K+Y  GPE+  +N V+++F +   +F+RV+FV+E+W K
Sbjct: 371  SAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSK 430

Query: 424  MRSTDLL--PRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMF 483
            + +  L    +     + S+T+IY R+LS+L  GI +G K F+FLAFS+SQLR NS+WMF
Sbjct: 431  LPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMF 490

Query: 484  ASRPGLDAADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHG 543
            AS   + A DIR WMG FR I++ +K AAR+GQ F +S +TL V   + E IPDIE+   
Sbjct: 491  ASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD 550

Query: 544  EVKYVFSDGIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRK 603
               Y FSDGIGKIS  FAK+VA KCG     PSAFQIRYGGYKGV+AVD  S  KLSLR 
Sbjct: 551  GADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRD 610

Query: 604  SMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTD 663
            SM KF+S+N  L+V  +++  PCFLNR++I LLSTLG+ D +FE  Q   +  L  +L D
Sbjct: 611  SMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLED 670

Query: 664  PLKAREALELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIP 723
               A   L+ ++   + N+L +ML  GY P  EPYLSMML+    S+L EL+++ RI +P
Sbjct: 671  RDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVP 730

Query: 724  NGRAMMGCLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPC 783
             GR ++GC+DE   LEYGQV+V+++  +    S   ++     E   V+ G V V KNPC
Sbjct: 731  KGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPC 790

Query: 784  LHPGDVRVLKAVNIPWLYHL-----VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTE 843
            LHPGD+RVL A+   +  H      +DC++FPQKG RPHPNECSG DLDGD +FV WD +
Sbjct: 791  LHPGDIRVLDAI---YEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEK 850

Query: 844  LIPPRQIPPMDYTPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKA 903
            +IP    PPMDY  + P  +D DVT E+I ++FV+YM++D+LG+I+ AH   AD++P KA
Sbjct: 851  IIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKA 910

Query: 904  RGSPCVELAKLFSIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRA 963
            R   C+ELA L S AVDF KTG PA +P  L  +EFPDF+E+ +KP+Y S++V GKL+RA
Sbjct: 911  RSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRA 970

Query: 964  VKDIAPTLSYIRSFTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIK 1023
            VK    +L+  +          YD  +E  GFE ++  A  H+  Y  KL +L+ YYG  
Sbjct: 971  VKS---SLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAA 1030

Query: 1024 SEAEILSGSI----MRMSKSFTRRRD-AEAINLAVRSLRKEARTWFNAREGGSNSDSDDL 1083
            +E EIL+G +    M +++   R  D  + I L+V+ L KEA  WF      S  D    
Sbjct: 1031 NEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK----SCEDEQQK 1090

Query: 1084 FAKASAWYHVTYHHSYWGCYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKR 1111
               ASAWY+VTY+       N   ++  +LSFPW V D L+ IK +N +++
Sbjct: 1091 KKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQ 1121

[Close]
BLAST of Bhi07G000388 vs. TAIR10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6)

HSP 1 Score: 585.9 bits (1509), Expect = 5.4e-167
Identity = 400/1086 (36.83%), Postives = 571/1086 (52.58%), Query Frame = 0 

Query: 92   TYMYTLEDLPLCFGCQVSSEKFRVLWEGD-IDLV------TFGIGMRKMNFHLKHNSV-- 151
            T  Y L  + L  G  VS + F V W  + +D +      T     RK       ++V  
Sbjct: 127  TVPYKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMH 186

Query: 152  -----KYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIYKNVAPCSVQIFDDPLFN 211
                  Y+LEL   +I  ++ +   H  +  LI+QL  +PR++   A       DD +++
Sbjct: 187  AVINCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTA-------DDDIYD 246

Query: 212  FFMEVP------DDQWIRTADFTPSCSIGQSSSLCLKLPNRCQ------LPNFRQNFAYY 271
                VP      DD WIRT DFT   +IG+  S  + +  R +      L  FR      
Sbjct: 247  ---TVPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQE 306

Query: 272  E------EFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPL 331
            E         NE    +  +   FC             + +EIMF +N+++  G      
Sbjct: 307  ERVRWPPRIRNEPCFGEPVSDHFFC-------IHHKEGISFEIMFLVNSVLHRGVFNQFQ 366

Query: 332  IDTSFYRLV--DPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRK-----YSRHPPN 391
            +   F+ L+   P+ + I  ++H          C+Y+   F   +  K       ++P  
Sbjct: 367  LTERFFDLLRNQPKDVNIASLKHL---------CTYKRPVFDAYKRLKLVQEWIQKNPKL 426

Query: 392  SPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKM 451
              +      +  +RR+ ITP + Y   PEV +SNRVLR +    + FLRV+F+DE    +
Sbjct: 427  LGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTI 486

Query: 452  RSTDLLPRMSPTSED-------SKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNS 511
             S  L   ++P  +D        KT ++KR+ S+L +G  +  + + FLAFS++QLRD S
Sbjct: 487  NSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRS 546

Query: 512  LWMFASRPGLDAADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREI-IPDI 571
             W FA       +DI+ WMG F+  KN AK AAR+G  F S+  T+ V   E +  +PDI
Sbjct: 547  AWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDI 606

Query: 572  ELQHGEVKYVFSDGIGKISNDFAKKVAAKCGFQ-GSTPSAFQIRYGGYKGVVAVDPHSS- 631
            E ++G   YVFSDGIG I+ D A +V  K       +P A+QIRY G+KGVVA  P  S 
Sbjct: 607  E-RNG---YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSD 666

Query: 632  -IKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVE 691
             I+L+LR SM KF S +T L++  ++++QP FLNRQ+ITLLS LGV DEIF + Q   + 
Sbjct: 667  GIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLY 726

Query: 692  QLDAILTDPLKAREALELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELR 751
            +L+ IL D   A E L      E  N    ML  G+KP  EP+L  ML + R ++L  LR
Sbjct: 727  KLNRILDDTDVAFEVLTASC-AEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLR 786

Query: 752  TKSRIFIPNGRAMMGCLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRL-VIEG 811
             KSRIF+ +GR +MGCLDE   LE+GQ F+Q+S     N            +  L V++G
Sbjct: 787  EKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKG 846

Query: 812  NVTVAKNPCLHPGDVRVLKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVC 871
             V +AKNPCLHPGDVR+L+AV++P L+H+ DC++FPQKG RPH NE SGSDLDGD+YFV 
Sbjct: 847  YVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVA 906

Query: 872  WDTELIPP--RQIPPMDYTPAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFAD 931
            WD +LIPP  +  P M Y  A    L R V  +DI ++F   + N+ LG I NAH   AD
Sbjct: 907  WDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHAD 966

Query: 932  KEPFKARGSPCVELAKLFSIAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVI 991
            +  + A    C+ LA+L + AVDFPKTG    +P HL  K +PDFM K D  +Y+S  ++
Sbjct: 967  RSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKIL 1026

Query: 992  GKLFRAVKDIAPTLSYIRS-FTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNL 1051
            G+L+R VK++    +   S  + D +   YD+ +E+ GFED + +A+ HK  YD +L  L
Sbjct: 1027 GRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGL 1086

Query: 1052 LDYYGIKSEAEILSGSIMRMSKSFTRRRD--AEAINLAVRSLRKEARTWFNA----REGG 1111
            L  Y ++ E EI++G I  M K  ++++    E +  +  SL+KE R  F       E  
Sbjct: 1087 LGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENL 1146

[Close]
BLAST of Bhi07G000388 vs. TAIR10
Match: AT2G19910.1 (RNA-dependent RNA polymerase family protein)

HSP 1 Score: 123.2 bits (308), Expect = 9.9e-28
Identity = 121/473 (25.58%), Postives = 192/473 (40.59%), Query Frame = 0 

Query: 534 VFSDGIGKISNDFAKKV----------------AAKCGFQGSTPSA--------FQIRYG 593
           + SDG G IS D A+                  +    F+G  P          F+I Y 
Sbjct: 401 IHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGPCGQEPPLLIQFRIFYN 460

Query: 594 GY--KGVVAVDPHSSIK-LSLRKSMCKFESDNTKLDVLGYSKYQ---------PCFLNRQ 653
           GY  KG    +     + + +R SM K   D T  ++  ++  +            L+R 
Sbjct: 461 GYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRN 520

Query: 654 LITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALELMAPGENTNILKEMLKCGY 713
           L+ LLS  GV ++ F N  R  +E+   I       R A +      +     +M+  G 
Sbjct: 521 LVALLSYGGVPNDFFLNILRNTLEESKTIF---YSERAAFKAAINYGDDQYTADMILVGI 580

Query: 714 KPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVFVQISSAR 773
             D EPYL   L     ++   L+   R  I     +MG +D T  L+  ++ V + S +
Sbjct: 581 PLD-EPYLKDRLSYLLKTERNALKA-GRFPIDESYYIMGTVDPTGELKENEICVILHSGQ 640

Query: 774 RRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLKAVNIPWLYHLVD----CV 833
                               I G+V V +NP LH GD+ VLKA  +  L   V      V
Sbjct: 641 --------------------ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAV 700

Query: 834 VFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP---------PRQIPPMDYTPAPPIQL 893
            FPQKG R   +E +G D DGD+YF+  + +L+              P   Y    P +L
Sbjct: 701 FFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCGRKPSEL 760

Query: 894 DRDVTTEDIQEYFV--NYMVNDSLGIIANAHTAFAD----------KEPFKARGSPCVEL 946
             +   E++ + F+   +   D +G+ A+      D          KE ++ R    ++L
Sbjct: 761 SEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYE-RKKNILKL 820

[Close]
BLAST of Bhi07G000388 vs. TAIR10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.4e-26
Identity = 162/639 (25.35%), Postives = 257/639 (40.22%), Query Frame = 0 

Query: 397 DNFLRVSFVDEEWDKMRSTDLLPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAF 456
           DN L V F D              +  +S     D Y     + +NGI+IG + +QF  F
Sbjct: 242 DNVLTVKFAD--------------VQKSSSTYSIDHYFTYKGIAKNGIMIGLRRYQFFVF 301

Query: 457 ------------SSSQLR------DNSLWMFASRPG-LDAADIRAWMGDFRHIKNP---A 516
                       S+ +++      D++ +     P  L    I      F H+      A
Sbjct: 302 KDGGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLA 361

Query: 517 KYAARLGQSFGSSTETLSVARD--EREIIPDIE---------LQHGEVKYVFSDGIGKIS 576
            Y AR      S T+TL V       + I DI          L   +   + SDG G IS
Sbjct: 362 NYMARFSLIL-SKTKTLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYIS 421

Query: 577 NDFAKK-----VAAKCGFQGSTPSA----------FQIRYGGY--KG-----------VV 636
            D A+         KC    S   A          F++ Y GY  KG            V
Sbjct: 422 EDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTV 481

Query: 637 AVDPHSSIKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENK 696
            V P S IK+S   S+  F + N    V   +  +   L++ L+ LLS  G+ +E F + 
Sbjct: 482 QVRP-SMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLDI 541

Query: 697 QREAVEQLDAILTDPLKAREALELMAPGENTNILKEMLKCGY---KPDVEPYLSMMLQTF 756
               +E+  +I  +   A  A       ++ N   +M+  G    +P ++ YLS++L+T 
Sbjct: 542 LLNTLEESKSIFYNKRAALNAALNYGEMDDQN-AAQMILVGIPLDEPHLKNYLSILLKTE 601

Query: 757 RASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGP 816
           +     +L+   ++ +     +MG +D T  L+  +V V + S +               
Sbjct: 602 KN----DLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESGQ--------------- 661

Query: 817 EHRLVIEGNVTVAKNPCLHPGDVRVLKAVNIPWLYHLVD----CVVFPQKGSRPHPNECS 876
                I G V V +NP LH GD+ +LKA  +  L   V      V FPQKG R   +E +
Sbjct: 662 -----ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIA 721

Query: 877 GSDLDGDIYFVCWDTELI---PPRQIPPMDYTP-------APPIQLDRDVTTEDIQEYFV 936
           G D DGD+YF+  + EL+    P + P +  TP         P QL  +   E++ E F+
Sbjct: 722 GGDFDGDMYFISRNPELLENFKPSE-PWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFL 781

Query: 937 --NYMVNDSLGIIANAHTAFADK---------EPFKARGSPCVELAKLFSIAVDFPKTGV 947
              +  ++ +GI A++     D+         E         +EL  ++  A+D PK G 
Sbjct: 782 TAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGD 835

[Close]
BLAST of Bhi07G000388 vs. TrEMBL
Match: tr|A0A1S3CPY1|A0A1S3CPY1_CUCME (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103502906 PE=3 SV=1)

HSP 1 Score: 2050.8 bits (5312), Expect = 0.0e+00
Identity = 1003/1131 (88.68%), Postives = 1061/1131 (93.81%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LI+SLANQ LWYGSSYLKAR+ EVDIVPKP+TYMY L+DL LCFGCQVSSEKFRVLWEG+
Sbjct: 61   LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYMLKDLLLCFGCQVSSEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+NSV+YRLELSYENIWQIQLH PQ +SMKYL+IQLYGAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+P+ NFFMEVPDDQW+RT DFT SCSIGQSSSLCLKLPN  +LP F+Q
Sbjct: 181  KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D DASFSFCRDLAPIVDSRPHVLPYEI+FKINALVQHGCIPW L+
Sbjct: 241  NFAYYEEFEHEFRLIDEDASFSFCRDLAPIVDSRPHVLPYEIIFKINALVQHGCIPWSLL 300

Query: 301  DTSFYRLVDP-RRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAISLD 360
            DTSFYRLV+    IRIEFVEHALEKLFHLKEC+Y+PS+F+TEQ+R+YSRHPPNSP ISLD
Sbjct: 301  DTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISLD 360

Query: 361  AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDLLP 420
             GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +  DNFLRVSFVDEEWDKMRSTDLLP
Sbjct: 361  DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLLP 420

Query: 421  RMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDAAD 480
            RMS  SEDSKTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DAA 
Sbjct: 421  RMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAAY 480

Query: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSDGI 540
            IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+QHGEVKYVFSDGI
Sbjct: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDGI 540

Query: 541  GKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESDNT 600
            GKIS+ FAK+VA KCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESDN 
Sbjct: 541  GKISSKFAKEVATKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNI 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALEL 660
            KLDVLG+SKYQPCFLNRQLITLLSTLGVRDEIFE KQ EAVEQLDAILTDPLKA+EALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720
            M+PGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLK 780
            ET TLEYGQVFVQIS  R RNLS+SFAFN SG EH LVIEG VTVAKNPCLHPGDVRVLK
Sbjct: 721  ETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVN+P LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQI PMDYTPA
Sbjct: 781  AVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQITPMDYTPA 840

Query: 841  PPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFSIA 900
             PI+LDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKAR SPCVELAK FSIA
Sbjct: 841  LPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSIA 900

Query: 901  VDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFT 960
            VDFPKTGVPAIIP HLYVKEFPDFMEKPD+PSYESKNVIGKLFRAVKDIAPTLS+I+ FT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPFT 960

Query: 961  RDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
            RDVA +CYD DMEVEGFEDY  DAFYHKSNYD KLGNLLDYYGIKSEAEILSGSIMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYFEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCY 1080
            SFTRRRDAEAINLAVRSLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWGCY
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGCY 1080

Query: 1081 NEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGG 1131
            NE MKRDHYLSFPWC+YDKLMQIKE NLRKRERA RLAT DRFGH LNLGG
Sbjct: 1081 NEGMKRDHYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGHVLNLGG 1128

[Close]
BLAST of Bhi07G000388 vs. TrEMBL
Match: tr|A0A0S1YD00|A0A0S1YD00_CUCME (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=RDR1a PE=2 SV=1)

HSP 1 Score: 2041.9 bits (5289), Expect = 0.0e+00
Identity = 1000/1131 (88.42%), Postives = 1061/1131 (93.81%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LI+SLANQ LWYGSSYLKAR+ EVDIVPKP+TYMYTL+DL LCFGCQVSSEKFRVLWEG+
Sbjct: 61   LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYTLKDLLLCFGCQVSSEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+NSV+YRLELSYENIWQIQLH PQ +SMKYL+IQLYGAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+P+ NFFMEVPDDQW+RT DFT SCSIGQSSSLCLKLPN  +LP F+Q
Sbjct: 181  KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D  ASFSFCRDLAPIVDSRPHVLPYEI+FKINALVQHGCIPW L+
Sbjct: 241  NFAYYEEFEHEFRLIDEGASFSFCRDLAPIVDSRPHVLPYEIIFKINALVQHGCIPWSLL 300

Query: 301  DTSFYRLVDP-RRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAISLD 360
            DTSFYRLV+    IRIEFVEHALEKLFHLKEC+Y+PS+F+TEQ+R+YSRHPPNSP ISLD
Sbjct: 301  DTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISLD 360

Query: 361  AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDLLP 420
             GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +  DNFLRVSFVDEEWDKMRSTDLLP
Sbjct: 361  DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLLP 420

Query: 421  RMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDAAD 480
            RMS  SEDSKTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DAA 
Sbjct: 421  RMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAAY 480

Query: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSDGI 540
            IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+QHGEVKYVFSDGI
Sbjct: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDGI 540

Query: 541  GKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESDNT 600
            GKIS+ FAK+VA KCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESDN 
Sbjct: 541  GKISSKFAKEVATKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNI 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALEL 660
            KLDVLG+SKYQPCFLNRQLITLLSTLGVRDEIFE KQ EAVEQLDAILTDPLKA+EALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720
            M+PGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLK 780
            ET TLEYGQVFVQIS  R RNLS+SFAFN SG EH LVIEG VTVAKNPCLHPGDVRVLK
Sbjct: 721  ETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVN+P LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPR+I PMDYTPA
Sbjct: 781  AVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRRITPMDYTPA 840

Query: 841  PPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFSIA 900
             PI+LDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKAR SPCVELAK FSIA
Sbjct: 841  LPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSIA 900

Query: 901  VDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFT 960
            VDFPKTGVPAIIP HLYVKEFPDFMEKPD+PSYESKNVIGKLFRAVKDIAPTLS+I+ FT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPFT 960

Query: 961  RDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
            RDVA +CYD DMEVEGFEDYV DAFYHKSNYD KLGNLLDYYGIKSEAEILSGSIMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCY 1080
            SFTRRRDAEAINLAVRSLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGYY 1080

Query: 1081 NEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGG 1131
            NE MKRD+YLSFPWC+YDKLMQIKE NLRKRERA RLAT DRFG+ LNLGG
Sbjct: 1081 NEGMKRDYYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGYVLNLGG 1128

[Close]
BLAST of Bhi07G000388 vs. TrEMBL
Match: tr|E9NWK6|E9NWK6_CUCSA (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1a PE=2 SV=1)

HSP 1 Score: 2037.3 bits (5277), Expect = 0.0e+00
Identity = 998/1133 (88.08%), Postives = 1059/1133 (93.47%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LIISLANQ LWYGSSYLKARA EVDIVPKPRTYMYTLE+L LCFGCQVS+EKFRVLWEG+
Sbjct: 61   LIISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+ SV+YRLELSYE IWQIQLH P+ +SMKYL+IQL GAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+PL NFF E  DDQW+RT DFT SCSIGQSSSLCLKLPN  QLP F+Q
Sbjct: 181  KKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D DA+FSFCRDLAPIVDSR HVLPY+I+FKINALVQ+GCIPWPL+
Sbjct: 241  NFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVLPYKILFKINALVQYGCIPWPLL 300

Query: 301  DTSFYRLVDPRRI---RIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAIS 360
            D SFYRLV+  RI   RIEFVEHALEKLFHLKEC+Y+PS+F+TEQYRKYSRHPPNSP IS
Sbjct: 301  DASFYRLVE--RIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDL 420
            LD GLVYVRRVQITPCKV+FCGPEVNVSNRVLRHF Q  DNFLRVSFVDEEWDKMRSTDL
Sbjct: 361  LDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDL 420

Query: 421  LPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDA 480
            LPRMS  SED KTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DA
Sbjct: 421  LPRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDA 480

Query: 481  ADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSD 540
            A IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+Q GE+KYVFSD
Sbjct: 481  AYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSD 540

Query: 541  GIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESD 600
            GIGKIS+ FAK+VAAKCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESD
Sbjct: 541  GIGKISSKFAKEVAAKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESD 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREAL 660
            NTKLDVLG+SKYQPCFLNRQLITL+STLGVRDEIFE KQ EAVEQLDAILTDPLKA+EAL
Sbjct: 601  NTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEAL 660

Query: 661  ELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720
            ELM+PGENTNILKEMLKCGY+PDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720

Query: 721  LDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRV 780
            LDETRTLEYGQVFVQISS R RNLS+SFAFN  G EH LVIEGNVTVAKNPCLHPGDVRV
Sbjct: 721  LDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRV 780

Query: 781  LKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYT 840
            LKAVNIP LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP RQIPPMDYT
Sbjct: 781  LKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYT 840

Query: 841  PAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFS 900
            PAPP +LDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKE FKAR SPC+ELAKLFS
Sbjct: 841  PAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFS 900

Query: 901  IAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRS 960
            +AVDFPKTGVPAIIP HLYVKEFPDFMEKPD+PSYES  VIGKLFRAVKDIAPTLS+IRS
Sbjct: 901  VAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRS 960

Query: 961  FTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRM 1020
            FTRDVA +CYD DMEVEGFEDYV DAFYHKSNYDYKLGNLLDYYGIKSEAE+LSGSIMRM
Sbjct: 961  FTRDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRM 1020

Query: 1021 SKSFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWG 1080
            SKSFTRRRDAEAINLAVRSLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWG
Sbjct: 1021 SKSFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWG 1080

Query: 1081 CYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGG 1131
            CYNE MKRDHYLSFPWCVYDKLMQIKE NLR+RERA RLA+ DRFGH LNLGG
Sbjct: 1081 CYNEGMKRDHYLSFPWCVYDKLMQIKENNLRRRERAARLASFDRFGHVLNLGG 1129

[Close]
BLAST of Bhi07G000388 vs. TrEMBL
Match: tr|A0A0A0KSM9|A0A0A0KSM9_CUCSA (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G239140 PE=3 SV=1)

HSP 1 Score: 2016.9 bits (5224), Expect = 0.0e+00
Identity = 998/1175 (84.94%), Postives = 1059/1175 (90.13%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LIISLANQ LWYGSSYLKARA EVDIVPKPRTYMYTLE+L LCFGCQVS+EKFRVLWEG+
Sbjct: 61   LIISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+ SV+YRLELSYE IWQIQLH P+ +SMKYL+IQL GAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+PL NFF E  DDQW+RT DFT SCSIGQSSSLCLKLPN  QLP F+Q
Sbjct: 181  KKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D DA+FSFCRDLAPIVDSR HVLPY+I+FKINALVQ+GCIPWPL+
Sbjct: 241  NFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVLPYKILFKINALVQYGCIPWPLL 300

Query: 301  DTSFYRLVDPRRI---RIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAIS 360
            D SFYRLV+  RI   RIEFVEHALEKLFHLKEC+Y+PS+F+TEQYRKYSRHPPNSP IS
Sbjct: 301  DASFYRLVE--RIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDL 420
            LD GLVYVRRVQITPCKV+FCGPEVNVSNRVLRHF Q  DNFLRVSFVDEEWDKMRSTDL
Sbjct: 361  LDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDL 420

Query: 421  LPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDA 480
            LPRMS  SED KTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DA
Sbjct: 421  LPRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDA 480

Query: 481  ADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSD 540
            A IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+Q GE+KYVFSD
Sbjct: 481  AYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSD 540

Query: 541  GIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESD 600
            GIGKIS+ FAK+VAAKCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESD
Sbjct: 541  GIGKISSKFAKEVAAKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESD 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREAL 660
            NTKLDVLG+SKYQPCFLNRQLITL+STLGVRDEIFE KQ EAVEQLDAILTDPLKA+EAL
Sbjct: 601  NTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEAL 660

Query: 661  ELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720
            ELM+PGENTNILKEMLKCGY+PDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720

Query: 721  LDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRV 780
            LDETRTLEYGQVFVQISS R RNLS+SFAFN  G EH LVIEGNVTVAKNPCLHPGDVRV
Sbjct: 721  LDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRV 780

Query: 781  LKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYT 840
            LKAVNIP LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP RQIPPMDYT
Sbjct: 781  LKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYT 840

Query: 841  PAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHT----------------------- 900
            PAPP +LDRDVTTEDIQEYFVNYMVNDSLGIIANAHT                       
Sbjct: 841  PAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFXXXXXXXXXXXXXXX 900

Query: 901  -------------------AFADKEPFKARGSPCVELAKLFSIAVDFPKTGVPAIIPPHL 960
                               AFADKE FKAR SPC+ELAKLFS+AVDFPKTGVPAIIP HL
Sbjct: 901  XXXXXXXXXXXXXXXXXXXAFADKELFKARSSPCLELAKLFSVAVDFPKTGVPAIIPSHL 960

Query: 961  YVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFTRDVAMQCYDSDMEVEG 1020
            YVKEFPDFMEKPD+PSYES  VIGKLFRAVKDIAPTLS+IRSFTRDVA +CYD DMEVEG
Sbjct: 961  YVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDMEVEG 1020

Query: 1021 FEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRDAEAINLAVR 1080
            FEDYV DAFYHKSNYDYKLGNLLDYYGIKSEAE+LSGSIMRMSKSFTRRRDAEAINLAVR
Sbjct: 1021 FEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEAINLAVR 1080

Query: 1081 SLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCYNEEMKRDHYLSFPWCV 1131
            SLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWGCYNE MKRDHYLSFPWCV
Sbjct: 1081 SLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCV 1140

[Close]
BLAST of Bhi07G000388 vs. TrEMBL
Match: tr|A0A2P4KFU4|A0A2P4KFU4_QUESU (RNA-dependent RNA polymerase OS=Quercus suber OX=58331 GN=CFP56_76852 PE=3 SV=1)

HSP 1 Score: 1624.4 bits (4205), Expect = 0.0e+00
Identity = 789/1132 (69.70%), Postives = 936/1132 (82.69%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKTV ++GF S VTA+AVK F+E  TG GT+YAIK+R  K   A  YAI+QFT+   AE
Sbjct: 1    MGKTVQLNGFHSAVTAEAVKEFVEQYTGEGTIYAIKIRQSKGKRALAYAIIQFTTTRCAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LIISLA++ LWYG+SYL AR  E DIVPKPRT+++++E++ L  GCQ+S+ KF  LW+  
Sbjct: 61   LIISLASKRLWYGTSYLTAREMEHDIVPKPRTFLHSMENIELHLGCQISNGKFVTLWKAV 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
               V FG G++K+ F L HN ++Y+L+LSYENIWQI+LH P  +S KYL+IQL+GAPRIY
Sbjct: 121  NVSVKFGAGLQKLQFFLSHNYLEYKLDLSYENIWQIELHCPPDQSAKYLLIQLFGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            +     S   FD+P  N+FM +PDDQWIR  DFTPSC +GQSS LCL+LP   QLPNF +
Sbjct: 181  EKAVRTSGNEFDNPFLNYFMHIPDDQWIRATDFTPSCCVGQSSFLCLELPFGHQLPNFEE 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHV-LPYEIMFKINALVQHGCIPWPL 300
            NFA+Y+E   E  +++  +SFS   DL P+V   P V LPYEI+FKIN+LVQ+GC+  P 
Sbjct: 241  NFAFYKE-SKEIYILEPGSSFSSNLDLVPVVSPPPGVALPYEILFKINSLVQNGCLAGPT 300

Query: 301  IDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKY--SRHPPNSPAIS 360
            +D +FYRL+DP +I+I ++E+ALEKLFHLKEC YEPS +++EQYRKY  SR+PP SPAIS
Sbjct: 301  LDANFYRLIDPIKIKISYIEYALEKLFHLKECCYEPSKWLSEQYRKYITSRYPPKSPAIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDL 420
            LD GLVYVRRVQITPCKVYFCGPE+NVSNRVLR++P+D DNFLRVSFVDEE DKM STDL
Sbjct: 361  LDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRNYPEDIDNFLRVSFVDEELDKMYSTDL 420

Query: 421  LPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDA 480
             PR S  +ED +T IYKRILS+LRNGIVIGDK F+FLAFSSSQLR+NSLWMFASR GL+A
Sbjct: 421  SPRASSGNEDRRTGIYKRILSILRNGIVIGDKKFEFLAFSSSQLRENSLWMFASREGLNA 480

Query: 481  ADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSD 540
            A IR WMG+FR IKN AKYAARLGQSF SSTETLSV+R E +IIPDIE++ G V YVFSD
Sbjct: 481  AGIREWMGNFRQIKNVAKYAARLGQSFSSSTETLSVSRHEIDIIPDIEIKRGGVNYVFSD 540

Query: 541  GIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESD 600
            GIGKIS +FAKKVA KC  +G TPSAFQIRY GYKGVVA+DP S +KLSLRKSM K+ES+
Sbjct: 541  GIGKISAEFAKKVALKCNCKGQTPSAFQIRYAGYKGVVAIDPTSFVKLSLRKSMSKYESN 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREAL 660
            NTKLDVL +SK+QPCFLNRQLITLLSTLGV+D +FE KQREAVEQLDAILTDPL+A+EAL
Sbjct: 601  NTKLDVLAFSKFQPCFLNRQLITLLSTLGVKDYVFEKKQREAVEQLDAILTDPLRAQEAL 660

Query: 661  ELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720
            +LM+PGENTN+LKE+L CGY+PD EP+LSMMLQTFRASKLLELRTK+RIFIPNGRAMMGC
Sbjct: 661  DLMSPGENTNVLKEILMCGYRPDSEPFLSMMLQTFRASKLLELRTKTRIFIPNGRAMMGC 720

Query: 721  LDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRV 780
            LDETRTLEYG+VFVQ S  R R L + F+        + V+ G + VAKNPCLHPGDVRV
Sbjct: 721  LDETRTLEYGEVFVQYSRNRHRQLYNDFSMCRGSGSDQKVVVGKIVVAKNPCLHPGDVRV 780

Query: 781  LKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYT 840
            LKAV++  L+H+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD EL+PP+QI PMDYT
Sbjct: 781  LKAVDVSALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDCELLPPQQIQPMDYT 840

Query: 841  PAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFS 900
            PA  +QLD DVT E+++EYF NY+VNDSLGIIANAHTAFADKEP KA   PC+ELAKLFS
Sbjct: 841  PAQSLQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHTAFADKEPLKAMSGPCIELAKLFS 900

Query: 901  IAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRS 960
            IAVDF KTGVPA+IPP L+VKE+PDFMEKPDKP+Y S NVIGKLFR VKDIAP  +Y +S
Sbjct: 901  IAVDFNKTGVPAVIPPKLHVKEYPDFMEKPDKPTYGSCNVIGKLFREVKDIAPNTNYSKS 960

Query: 961  FTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRM 1020
            FT + A + YDSDMEV+GFED++ DA Y+K NYD KLGNL+DYYGIK+EAEILSG+I+RM
Sbjct: 961  FTAEAARRSYDSDMEVDGFEDFIDDAVYYKGNYDEKLGNLMDYYGIKTEAEILSGNIIRM 1020

Query: 1021 SKSFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWG 1080
             KSFT+RRD+EAI +AVRSLRK A+ WFN R    +S++DD++AKASAWYHVTYHHSYWG
Sbjct: 1021 GKSFTKRRDSEAITMAVRSLRKVAKAWFNERGSKLDSEADDVYAKASAWYHVTYHHSYWG 1080

Query: 1081 CYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLD-RFGHALNL 1129
             YNE M RDH+LSFPWCVYDKL+ IK++  +KR RAL L +L+ +F   L L
Sbjct: 1081 TYNEGMNRDHFLSFPWCVYDKLIHIKKEKAKKR-RALNLFSLEHQFTRGLRL 1130

[Close]
BLAST of Bhi07G000388 vs. NCBI nr
Match: XP_008465250.1 (PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo] >XP_008465251.1 PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo] >XP_008465253.1 PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo] >XP_008465254.1 PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo])

HSP 1 Score: 2050.8 bits (5312), Expect = 0.0e+00
Identity = 1003/1131 (88.68%), Postives = 1061/1131 (93.81%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LI+SLANQ LWYGSSYLKAR+ EVDIVPKP+TYMY L+DL LCFGCQVSSEKFRVLWEG+
Sbjct: 61   LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYMLKDLLLCFGCQVSSEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+NSV+YRLELSYENIWQIQLH PQ +SMKYL+IQLYGAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+P+ NFFMEVPDDQW+RT DFT SCSIGQSSSLCLKLPN  +LP F+Q
Sbjct: 181  KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D DASFSFCRDLAPIVDSRPHVLPYEI+FKINALVQHGCIPW L+
Sbjct: 241  NFAYYEEFEHEFRLIDEDASFSFCRDLAPIVDSRPHVLPYEIIFKINALVQHGCIPWSLL 300

Query: 301  DTSFYRLVDP-RRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAISLD 360
            DTSFYRLV+    IRIEFVEHALEKLFHLKEC+Y+PS+F+TEQ+R+YSRHPPNSP ISLD
Sbjct: 301  DTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISLD 360

Query: 361  AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDLLP 420
             GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +  DNFLRVSFVDEEWDKMRSTDLLP
Sbjct: 361  DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLLP 420

Query: 421  RMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDAAD 480
            RMS  SEDSKTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DAA 
Sbjct: 421  RMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAAY 480

Query: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSDGI 540
            IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+QHGEVKYVFSDGI
Sbjct: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDGI 540

Query: 541  GKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESDNT 600
            GKIS+ FAK+VA KCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESDN 
Sbjct: 541  GKISSKFAKEVATKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNI 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALEL 660
            KLDVLG+SKYQPCFLNRQLITLLSTLGVRDEIFE KQ EAVEQLDAILTDPLKA+EALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720
            M+PGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLK 780
            ET TLEYGQVFVQIS  R RNLS+SFAFN SG EH LVIEG VTVAKNPCLHPGDVRVLK
Sbjct: 721  ETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVN+P LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQI PMDYTPA
Sbjct: 781  AVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQITPMDYTPA 840

Query: 841  PPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFSIA 900
             PI+LDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKAR SPCVELAK FSIA
Sbjct: 841  LPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSIA 900

Query: 901  VDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFT 960
            VDFPKTGVPAIIP HLYVKEFPDFMEKPD+PSYESKNVIGKLFRAVKDIAPTLS+I+ FT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPFT 960

Query: 961  RDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
            RDVA +CYD DMEVEGFEDY  DAFYHKSNYD KLGNLLDYYGIKSEAEILSGSIMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYFEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCY 1080
            SFTRRRDAEAINLAVRSLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWGCY
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGCY 1080

Query: 1081 NEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGG 1131
            NE MKRDHYLSFPWC+YDKLMQIKE NLRKRERA RLAT DRFGH LNLGG
Sbjct: 1081 NEGMKRDHYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGHVLNLGG 1128

[Close]
BLAST of Bhi07G000388 vs. NCBI nr
Match: NP_001315397.1 (RNA-dependent RNA polymerase 1 [Cucumis melo] >ALM88236.1 RNA-dependent RNA polymerase 1a [Cucumis melo])

HSP 1 Score: 2041.9 bits (5289), Expect = 0.0e+00
Identity = 1000/1131 (88.42%), Postives = 1061/1131 (93.81%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LI+SLANQ LWYGSSYLKAR+ EVDIVPKP+TYMYTL+DL LCFGCQVSSEKFRVLWEG+
Sbjct: 61   LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYTLKDLLLCFGCQVSSEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+NSV+YRLELSYENIWQIQLH PQ +SMKYL+IQLYGAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+P+ NFFMEVPDDQW+RT DFT SCSIGQSSSLCLKLPN  +LP F+Q
Sbjct: 181  KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D  ASFSFCRDLAPIVDSRPHVLPYEI+FKINALVQHGCIPW L+
Sbjct: 241  NFAYYEEFEHEFRLIDEGASFSFCRDLAPIVDSRPHVLPYEIIFKINALVQHGCIPWSLL 300

Query: 301  DTSFYRLVDP-RRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAISLD 360
            DTSFYRLV+    IRIEFVEHALEKLFHLKEC+Y+PS+F+TEQ+R+YSRHPPNSP ISLD
Sbjct: 301  DTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISLD 360

Query: 361  AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDLLP 420
             GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +  DNFLRVSFVDEEWDKMRSTDLLP
Sbjct: 361  DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLLP 420

Query: 421  RMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDAAD 480
            RMS  SEDSKTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DAA 
Sbjct: 421  RMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAAY 480

Query: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSDGI 540
            IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+QHGEVKYVFSDGI
Sbjct: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDGI 540

Query: 541  GKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESDNT 600
            GKIS+ FAK+VA KCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESDN 
Sbjct: 541  GKISSKFAKEVATKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNI 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALEL 660
            KLDVLG+SKYQPCFLNRQLITLLSTLGVRDEIFE KQ EAVEQLDAILTDPLKA+EALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720
            M+PGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLK 780
            ET TLEYGQVFVQIS  R RNLS+SFAFN SG EH LVIEG VTVAKNPCLHPGDVRVLK
Sbjct: 721  ETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVN+P LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPR+I PMDYTPA
Sbjct: 781  AVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRRITPMDYTPA 840

Query: 841  PPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFSIA 900
             PI+LDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKAR SPCVELAK FSIA
Sbjct: 841  LPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSIA 900

Query: 901  VDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFT 960
            VDFPKTGVPAIIP HLYVKEFPDFMEKPD+PSYESKNVIGKLFRAVKDIAPTLS+I+ FT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPFT 960

Query: 961  RDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
            RDVA +CYD DMEVEGFEDYV DAFYHKSNYD KLGNLLDYYGIKSEAEILSGSIMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCY 1080
            SFTRRRDAEAINLAVRSLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGYY 1080

Query: 1081 NEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGG 1131
            NE MKRD+YLSFPWC+YDKLMQIKE NLRKRERA RLAT DRFG+ LNLGG
Sbjct: 1081 NEGMKRDYYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGYVLNLGG 1128

[Close]
BLAST of Bhi07G000388 vs. NCBI nr
Match: NP_001267692.1 (RNA-dependent RNA polymerase 1-like [Cucumis sativus] >XP_011654423.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Cucumis sativus] >ADU77015.1 RNA-dependent RNA polymerase 1a [Cucumis sativus] >ALM88233.1 RNA-dependent RNA polymerase 1a [Cucumis sativus])

HSP 1 Score: 2037.3 bits (5277), Expect = 0.0e+00
Identity = 998/1133 (88.08%), Postives = 1059/1133 (93.47%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LIISLANQ LWYGSSYLKARA EVDIVPKPRTYMYTLE+L LCFGCQVS+EKFRVLWEG+
Sbjct: 61   LIISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+ SV+YRLELSYE IWQIQLH P+ +SMKYL+IQL GAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+PL NFF E  DDQW+RT DFT SCSIGQSSSLCLKLPN  QLP F+Q
Sbjct: 181  KKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D DA+FSFCRDLAPIVDSR HVLPY+I+FKINALVQ+GCIPWPL+
Sbjct: 241  NFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVLPYKILFKINALVQYGCIPWPLL 300

Query: 301  DTSFYRLVDPRRI---RIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAIS 360
            D SFYRLV+  RI   RIEFVEHALEKLFHLKEC+Y+PS+F+TEQYRKYSRHPPNSP IS
Sbjct: 301  DASFYRLVE--RIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDL 420
            LD GLVYVRRVQITPCKV+FCGPEVNVSNRVLRHF Q  DNFLRVSFVDEEWDKMRSTDL
Sbjct: 361  LDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDL 420

Query: 421  LPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDA 480
            LPRMS  SED KTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DA
Sbjct: 421  LPRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDA 480

Query: 481  ADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSD 540
            A IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+Q GE+KYVFSD
Sbjct: 481  AYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSD 540

Query: 541  GIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESD 600
            GIGKIS+ FAK+VAAKCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESD
Sbjct: 541  GIGKISSKFAKEVAAKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESD 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREAL 660
            NTKLDVLG+SKYQPCFLNRQLITL+STLGVRDEIFE KQ EAVEQLDAILTDPLKA+EAL
Sbjct: 601  NTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEAL 660

Query: 661  ELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720
            ELM+PGENTNILKEMLKCGY+PDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720

Query: 721  LDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRV 780
            LDETRTLEYGQVFVQISS R RNLS+SFAFN  G EH LVIEGNVTVAKNPCLHPGDVRV
Sbjct: 721  LDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRV 780

Query: 781  LKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYT 840
            LKAVNIP LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP RQIPPMDYT
Sbjct: 781  LKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYT 840

Query: 841  PAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFS 900
            PAPP +LDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKE FKAR SPC+ELAKLFS
Sbjct: 841  PAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFS 900

Query: 901  IAVDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRS 960
            +AVDFPKTGVPAIIP HLYVKEFPDFMEKPD+PSYES  VIGKLFRAVKDIAPTLS+IRS
Sbjct: 901  VAVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRS 960

Query: 961  FTRDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRM 1020
            FTRDVA +CYD DMEVEGFEDYV DAFYHKSNYDYKLGNLLDYYGIKSEAE+LSGSIMRM
Sbjct: 961  FTRDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRM 1020

Query: 1021 SKSFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWG 1080
            SKSFTRRRDAEAINLAVRSLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWG
Sbjct: 1021 SKSFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWG 1080

Query: 1081 CYNEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGG 1131
            CYNE MKRDHYLSFPWCVYDKLMQIKE NLR+RERA RLA+ DRFGH LNLGG
Sbjct: 1081 CYNEGMKRDHYLSFPWCVYDKLMQIKENNLRRRERAARLASFDRFGHVLNLGG 1129

[Close]
BLAST of Bhi07G000388 vs. NCBI nr
Match: KGN50761.1 (hypothetical protein Csa_5G239140 [Cucumis sativus])

HSP 1 Score: 2016.9 bits (5224), Expect = 0.0e+00
Identity = 998/1175 (84.94%), Postives = 1059/1175 (90.13%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKT+HISGFPS+VTADAVK+FLEG TG GTVYAIKVR PKRGG R+YAIVQFTSATQAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LIISLANQ LWYGSSYLKARA EVDIVPKPRTYMYTLE+L LCFGCQVS+EKFRVLWEG+
Sbjct: 61   LIISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGN 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            +DLVTFGIGMRKMNFHLK+ SV+YRLELSYE IWQIQLH P+ +SMKYL+IQL GAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFD+PL NFF E  DDQW+RT DFT SCSIGQSSSLCLKLPN  QLP F+Q
Sbjct: 181  KKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQ 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHVLPYEIMFKINALVQHGCIPWPLI 300
            NFAYYEEFE+EF+L+D DA+FSFCRDLAPIVDSR HVLPY+I+FKINALVQ+GCIPWPL+
Sbjct: 241  NFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVLPYKILFKINALVQYGCIPWPLL 300

Query: 301  DTSFYRLVDPRRI---RIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAIS 360
            D SFYRLV+  RI   RIEFVEHALEKLFHLKEC+Y+PS+F+TEQYRKYSRHPPNSP IS
Sbjct: 301  DASFYRLVE--RIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDL 420
            LD GLVYVRRVQITPCKV+FCGPEVNVSNRVLRHF Q  DNFLRVSFVDEEWDKMRSTDL
Sbjct: 361  LDDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDL 420

Query: 421  LPRMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDA 480
            LPRMS  SED KTDIY+RILSVL+NGIVIGDKTFQFLAFSSSQLRDNSLWMFAS P +DA
Sbjct: 421  LPRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDA 480

Query: 481  ADIRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSD 540
            A IRAWMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIE+Q GE+KYVFSD
Sbjct: 481  AYIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSD 540

Query: 541  GIGKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESD 600
            GIGKIS+ FAK+VAAKCGFQ + PSAFQIRYGGYKGVVAVDP+S+IKLSLRKSMCKFESD
Sbjct: 541  GIGKISSKFAKEVAAKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESD 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREAL 660
            NTKLDVLG+SKYQPCFLNRQLITL+STLGVRDEIFE KQ EAVEQLDAILTDPLKA+EAL
Sbjct: 601  NTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEAL 660

Query: 661  ELMAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720
            ELM+PGENTNILKEMLKCGY+PDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC
Sbjct: 661  ELMSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGC 720

Query: 721  LDETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRV 780
            LDETRTLEYGQVFVQISS R RNLS+SFAFN  G EH LVIEGNVTVAKNPCLHPGDVRV
Sbjct: 721  LDETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRV 780

Query: 781  LKAVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYT 840
            LKAVNIP LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP RQIPPMDYT
Sbjct: 781  LKAVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYT 840

Query: 841  PAPPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHT----------------------- 900
            PAPP +LDRDVTTEDIQEYFVNYMVNDSLGIIANAHT                       
Sbjct: 841  PAPPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFXXXXXXXXXXXXXXX 900

Query: 901  -------------------AFADKEPFKARGSPCVELAKLFSIAVDFPKTGVPAIIPPHL 960
                               AFADKE FKAR SPC+ELAKLFS+AVDFPKTGVPAIIP HL
Sbjct: 901  XXXXXXXXXXXXXXXXXXXAFADKELFKARSSPCLELAKLFSVAVDFPKTGVPAIIPSHL 960

Query: 961  YVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFTRDVAMQCYDSDMEVEG 1020
            YVKEFPDFMEKPD+PSYES  VIGKLFRAVKDIAPTLS+IRSFTRDVA +CYD DMEVEG
Sbjct: 961  YVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDMEVEG 1020

Query: 1021 FEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRDAEAINLAVR 1080
            FEDYV DAFYHKSNYDYKLGNLLDYYGIKSEAE+LSGSIMRMSKSFTRRRDAEAINLAVR
Sbjct: 1021 FEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEAINLAVR 1080

Query: 1081 SLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCYNEEMKRDHYLSFPWCV 1131
            SLRKEARTWFNARE G++S+SDDLFAKASAWY+VTYHHSYWGCYNE MKRDHYLSFPWCV
Sbjct: 1081 SLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCV 1140

[Close]
BLAST of Bhi07G000388 vs. NCBI nr
Match: XP_022943173.1 (RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943174.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943175.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1985.3 bits (5142), Expect = 0.0e+00
Identity = 965/1131 (85.32%), Postives = 1038/1131 (91.78%), Query Frame = 0 

Query: 1    MGKTVHISGFPSNVTADAVKSFLEGRTGVGTVYAIKVRAPKRGGARVYAIVQFTSATQAE 60
            MGKTVHISGFPS+ TAD+VKSFLE RTG+GTVYAIKVR PKRGG+RVYAIVQF  A QAE
Sbjct: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 60

Query: 61   LIISLANQSLWYGSSYLKARAAEVDIVPKPRTYMYTLEDLPLCFGCQVSSEKFRVLWEGD 120
            LIISLANQ LWYGSSYLKARAA+VDIVPKPRTY++TLEDL LCFGCQVSSEKF VLWEGD
Sbjct: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEGD 120

Query: 121  IDLVTFGIGMRKMNFHLKHNSVKYRLELSYENIWQIQLHHPQHRSMKYLIIQLYGAPRIY 180
            ++LVTFG+ MRKMNFHL HN V+YR +LSYENIWQIQLH  QH+SMK L+IQLYGAPRIY
Sbjct: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180

Query: 181  KNVAPCSVQIFDDPLFNFFMEVPDDQWIRTADFTPSCSIGQSSSLCLKLPNRCQLPNFRQ 240
            K VAP S QIFDDPLFNFF EVPDDQW+RTADFTPS S+GQSSSLCLKLPN  QLPNFR+
Sbjct: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFRR 240

Query: 241  NFAYYEEFENEFQLVDGDASFSFCRDLAPIVDSRPHV-LPYEIMFKINALVQHGCIPWPL 300
            +FAYYEEFE+EF+LVDG  SFS   DL P+VDSRP+V LPYEI+FK+N LVQ+GCI  P 
Sbjct: 241  HFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGPS 300

Query: 301  IDTSFYRLVDPRRIRIEFVEHALEKLFHLKECSYEPSSFITEQYRKYSRHPPNSPAISLD 360
            +DT FYRLVDP RIR+E+VE+ALEKLFHLKEC YEPSSF+TEQY+KY++HP NSPAI+LD
Sbjct: 301  LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 360

Query: 361  AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFPQDTDNFLRVSFVDEEWDKMRSTDLLP 420
             GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHF +D DNFLRVSFVDEEWDKMRSTDLLP
Sbjct: 361  DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 420

Query: 421  RMSPTSEDSKTDIYKRILSVLRNGIVIGDKTFQFLAFSSSQLRDNSLWMFASRPGLDAAD 480
            RM+ + E+ KTDIY+RILSVL+NGI IGDK F+FLAFSSSQLR+NSLWMFASRPGLDAA 
Sbjct: 421  RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 480

Query: 481  IRAWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARDEREIIPDIELQHGEVKYVFSDGI 540
            IR WMGDFRHIKNPAKYAARLGQSFGSSTETLSVAR EREIIPDIE+QHGEVKYVFSDGI
Sbjct: 481  IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540

Query: 541  GKISNDFAKKVAAKCGFQGSTPSAFQIRYGGYKGVVAVDPHSSIKLSLRKSMCKFESDNT 600
            GKIS+DFAK+VA+KC     TPSAFQIRYGGYKGVVAVDP SS+KLSLRKSMCKFESDNT
Sbjct: 541  GKISSDFAKRVASKC-VLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVRDEIFENKQREAVEQLDAILTDPLKAREALEL 660
            KLDVLGYSKYQPCFLNRQLITLLSTLGV+DE+FE KQ EA+EQLDAILTDPLKA+EALEL
Sbjct: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660

Query: 661  MAPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720
            M+PGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETRTLEYGQVFVQISSARRRNLSDSFAFNMSGPEHRLVIEGNVTVAKNPCLHPGDVRVLK 780
            ET TLEYGQVFVQISS R R++SD+ AF+MSG E  LVI GNVTVAKNPCLHPGDVRVL 
Sbjct: 721  ETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780

Query: 781  AVNIPWLYHLVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVN+P LYH+VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA
Sbjct: 781  AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840

Query: 841  PPIQLDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARGSPCVELAKLFSIA 900
            PPIQLDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKEPFKAR +PC+ELAKLFSIA
Sbjct: 841  PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900

Query: 901  VDFPKTGVPAIIPPHLYVKEFPDFMEKPDKPSYESKNVIGKLFRAVKDIAPTLSYIRSFT 960
            VDFPKTGVPAIIP HL VKEFPDFMEKPD+PSYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 901  VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSFT 960

Query: 961  RDVAMQCYDSDMEVEGFEDYVGDAFYHKSNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
            RDVAM+CYDSDME EGFEDYV DA YHK+ YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961  RDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAREGGSNSDSDDLFAKASAWYHVTYHHSYWGCY 1080
            SFTRRRDAEAINLA RSLRKEARTWFN +E G +S SDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGSY 1080

Query: 1081 NEEMKRDHYLSFPWCVYDKLMQIKEKNLRKRERALRLATLDRFGHALNLGG 1131
            N+ MKRDHYLSFPWCVY KLMQ+KE NLR+RE+A RLATLDRF   LNL G
Sbjct: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDG 1130

The following BLAST results are available for this feature:
BLAST of Bhi07G000388 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LQV2|RDR1_ARATH0.0e+0064.08RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1[more]
sp|Q0DXS3|RDR1_ORYSJ7.5e-28364.61Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|O82504|RDR2_ARATH1.8e-21539.52RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1[more]
sp|Q7XM31|RDR2_ORYSJ5.3e-21238.88Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|Q9SG02|RDR6_ARATH9.8e-16636.83RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1[more]
BLAST of Bhi07G000388 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14790.10.0e+0064.08RNA-dependent RNA polymerase 1[more]
AT4G11130.19.7e-21739.52RNA-dependent RNA polymerase 2[more]
AT3G49500.15.4e-16736.83RNA-dependent RNA polymerase 6[more]
AT2G19910.19.9e-2825.58RNA-dependent RNA polymerase family protein[more]
AT2G19930.11.4e-2625.35RNA-dependent RNA polymerase family protein[more]
BLAST of Bhi07G000388 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CPY1|A0A1S3CPY1_CUCME0.0e+0088.68RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103502906 PE=3 SV=1[more]
tr|A0A0S1YD00|A0A0S1YD00_CUCME0.0e+0088.42RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=RDR1a PE=2 SV=1[more]
tr|E9NWK6|E9NWK6_CUCSA0.0e+0088.08RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=RDR1a PE=2 SV=1[more]
tr|A0A0A0KSM9|A0A0A0KSM9_CUCSA0.0e+0084.94RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_5G239140 PE=3 SV=... [more]
tr|A0A2P4KFU4|A0A2P4KFU4_QUESU0.0e+0069.70RNA-dependent RNA polymerase OS=Quercus suber OX=58331 GN=CFP56_76852 PE=3 SV=1[more]
BLAST of Bhi07G000388 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465250.10.0e+0088.68PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo] >XP_008465251.1 PREDICT... [more]
NP_001315397.10.0e+0088.42RNA-dependent RNA polymerase 1 [Cucumis melo] >ALM88236.1 RNA-dependent RNA poly... [more]
NP_001267692.10.0e+0088.08RNA-dependent RNA polymerase 1-like [Cucumis sativus] >XP_011654423.1 PREDICTED:... [more]
KGN50761.10.0e+0084.94hypothetical protein Csa_5G239140 [Cucumis sativus][more]
XP_022943173.10.0e+0085.32RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_02294317... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003968RNA-directed RNA polymerase activity
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR007855RNA-dep_RNA_pol_euk-typ
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0060148 positive regulation of posttranscriptional gene silencing
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0045087 innate immune response
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0071310 cellular response to organic substance
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0006464 cellular protein modification process
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0051707 response to other organism
biological_process GO:0070919 production of siRNA involved in chromatin silencing by small RNA
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0009617 response to bacterium
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010468 regulation of gene expression
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0000165 MAPK cascade
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0007165 signal transduction
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0010025 wax biosynthetic process
biological_process GO:0001172 transcription, RNA-templated
biological_process GO:0009615 response to virus
biological_process GO:0009751 response to salicylic acid
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0031347 regulation of defense response
cellular_component GO:0005575 cellular_component
cellular_component GO:0031379 RNA-directed RNA polymerase complex
cellular_component GO:0031380 nuclear RNA-directed RNA polymerase complex
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003968 RNA-directed RNA polymerase activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000388Bhi07M000388mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 4..80
e-value: 4.4E-4
score: 29.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 3..84
score: 9.712
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 370..945
e-value: 5.8E-186
score: 619.5
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 79..1112
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 2..85
e-value: 8.5E-6
score: 27.9
NoneNo IPR availablePANTHERPTHR23079:SF1RNA-DEPENDENT RNA POLYMERASE FAMILYcoord: 79..1112
NoneNo IPR availableCDDcd00590RRM_SFcoord: 5..73
e-value: 1.05585E-6
score: 46.9145
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 2..87