Bhi03G000797 (gene) Wax gourd

Overview
NameBhi03G000797
Typegene
OrganismBenincasa hispida (Wax gourd)
Description50S ribosomal protein L7/L12
Locationchr3 : 20903453 .. 20904942 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCCATATTTATAAATAAGTTTTTATTTGGTTGTATTTGAAAACCATCCTATTACAATAACCAAAAGTGAATATGAACCAAAATTGTGTGAGATTCTGTCAAAGGGTAACGTGGACTTTTTGCCTATCTTTGGACTATTACTCAAATTGTTGATATTGTAGACAAATTTCAAAATGTCAAGTAGTTTTGAGGGTCACTGTTGGACGGGGAAACCCTAATCCTAATGAATTCAGACACCTGTAGGACGTCGGTGCTTCAATGAAAGACGATTTTCTGTGACTTGCGAATATTATCGACGGTGTCCGCCAGAAACCCTAATTCATCGAAATGCCATCGATTGCCTCCAAACTTCCGGCCAAAGCGTTAGTGAGACTTCTCACTGTCGCTCCAAGACCGTTGCTAGTTCGCTCCCTCAGCACCGTATCCAAGGAACGCACCCAGAAACTCGAGAGGATCGCCGATGAGCTCCTCGACCTCACTAAAATCGAACGACACGACTACGCCATCCTCTTCCGGTTGAAAATGGGTTTAAACAAGTACGGGCCTGCAGTTTCTGGGCTAAGCGCACCAGGTTCAGCCGCCGCCGGATCTGCCTCTGCCGAAGCAAAAGAGGCTGAGAAAACCGTTTTTGATATAAAGCTCGAGAAATTTGATGCGGCGGCGAAGATCAAGATCATAAAGGAGGTAAGGACGTTCACTGATTTGGGTTTGAAGGAGGCTAAGGATTTGGTGGAGAAGGTGCCGGTGGTGCTCAAGAAGGGAGTAACGAAAGATCAAGGAAACCCAATTATTGAAAAGCTAAAGGAATTGGGAGCTACTGCGGTACTGGAATGACTTTTTTTTCTCCGTCATTTCATATGTTCTTTTTGGAGTAAAATAATGCTGCCCTTGTTTGAGGACTAACGAAAATTTTTCAAAGAGCCAAGATTTATGAAGATTACAATTCAAAATCATATTGTTGCTTGACTTGAGATTCAAAGTACATTTGGTTTTTTTCCCTTTGGCATTTCTCCTCCGGATTTTCTATGAGAATCAGTTTCATTCTGACGTTCTTAGGCGGACCTGAAGAATTTAGCAAATCTATAATCCCCATGTAAACGAAGAGCACGAATCTGTTCTAAAAGCTCTTCATTTCTCTCTACTCATGTGACATGTGTGATATACGAAAAATCTCTACTTTTAGTTTAGCAAAATTTCCTTGAGATGCGGGAAAAGCTATATGTATTTTGTTCTTTCCTGAGATTCTTGAAGAACAATGAAACAGTTTTCATTCCGCTGCTTCTCTTGTGGCCTTGATTTGTTGGCGAAAAGTTGTGAAAGAATTGATCTACGGCTATCATTTTGTTGTATAATGGGTTGATCAGACGCTGAGGCATCCTTGGTCCCTGATTATTATTTAGGGAAAACATGCAAGGTCTCATTTGAAACTCAAGTTGATAAGGGGTTTCTATATCTTCTTTATCTGAATATCGCCCTAATAAAAACAGAC

mRNA sequence

GTGCCATATTTATAAATAAGTTTTTATTTGGTTGTATTTGAAAACCATCCTATTACAATAACCAAAAGTGAATATGAACCAAAATTGTGTGAGATTCTGTCAAAGGGTAACGTGGACTTTTTGCCTATCTTTGGACTATTACTCAAATTGTTGATATTGTAGACAAATTTCAAAATGTCAAGTAGTTTTGAGGGTCACTGTTGGACGGGGAAACCCTAATCCTAATGAATTCAGACACCTGTAGGACGTCGGTGCTTCAATGAAAGACGATTTTCTGTGACTTGCGAATATTATCGACGGTGTCCGCCAGAAACCCTAATTCATCGAAATGCCATCGATTGCCTCCAAACTTCCGGCCAAAGCGTTAGTGAGACTTCTCACTGTCGCTCCAAGACCGTTGCTAGTTCGCTCCCTCAGCACCGTATCCAAGGAACGCACCCAGAAACTCGAGAGGATCGCCGATGAGCTCCTCGACCTCACTAAAATCGAACGACACGACTACGCCATCCTCTTCCGGTTGAAAATGGGTTTAAACAAGTACGGGCCTGCAGTTTCTGGGCTAAGCGCACCAGGTTCAGCCGCCGCCGGATCTGCCTCTGCCGAAGCAAAAGAGGCTGAGAAAACCGTTTTTGATATAAAGCTCGAGAAATTTGATGCGGCGGCGAAGATCAAGATCATAAAGGAGGTAAGGACGTTCACTGATTTGGGTTTGAAGGAGGCTAAGGATTTGGTGGAGAAGGTGCCGGTGGTGCTCAAGAAGGGAGTAACGAAAGATCAAGGAAACCCAATTATTGAAAAGCTAAAGGAATTGGGAGCTACTGCGGTACTGGAATGACTTTTTTTTCTCCGTCATTTCATATGTTCTTTTTGGAGTAAAATAATGCTGCCCTTGTTTGAGGACTAACGAAAATTTTTCAAAGAGCCAAGATTTATGAAGATTACAATTCAAAATCATATTGTTGCTTGACTTGAGATTCAAAGTACATTTGGTTTTTTTCCCTTTGGCATTTCTCCTCCGGATTTTCTATGAGAATCAGTTTCATTCTGACGTTCTTAGGCGGACCTGAAGAATTTAGCAAATCTATAATCCCCATGTAAACGAAGAGCACGAATCTGTTCTAAAAGCTCTTCATTTCTCTCTACTCATGTGACATGTGTGATATACGAAAAATCTCTACTTTTAGTTTAGCAAAATTTCCTTGAGATGCGGGAAAAGCTATATGTATTTTGTTCTTTCCTGAGATTCTTGAAGAACAATGAAACAGTTTTCATTCCGCTGCTTCTCTTGTGGCCTTGATTTGTTGGCGAAAAGTTGTGAAAGAATTGATCTACGGCTATCATTTTGTTGTATAATGGGTTGATCAGACGCTGAGGCATCCTTGGTCCCTGATTATTATTTAGGGAAAACATGCAAGGTCTCATTTGAAACTCAAGTTGATAAGGGGTTTCTATATCTTCTTTATCTGAATATCGCCCTAATAAAAACAGAC

Coding sequence (CDS)

ATGCCATCGATTGCCTCCAAACTTCCGGCCAAAGCGTTAGTGAGACTTCTCACTGTCGCTCCAAGACCGTTGCTAGTTCGCTCCCTCAGCACCGTATCCAAGGAACGCACCCAGAAACTCGAGAGGATCGCCGATGAGCTCCTCGACCTCACTAAAATCGAACGACACGACTACGCCATCCTCTTCCGGTTGAAAATGGGTTTAAACAAGTACGGGCCTGCAGTTTCTGGGCTAAGCGCACCAGGTTCAGCCGCCGCCGGATCTGCCTCTGCCGAAGCAAAAGAGGCTGAGAAAACCGTTTTTGATATAAAGCTCGAGAAATTTGATGCGGCGGCGAAGATCAAGATCATAAAGGAGGTAAGGACGTTCACTGATTTGGGTTTGAAGGAGGCTAAGGATTTGGTGGAGAAGGTGCCGGTGGTGCTCAAGAAGGGAGTAACGAAAGATCAAGGAAACCCAATTATTGAAAAGCTAAAGGAATTGGGAGCTACTGCGGTACTGGAATGA

Protein sequence

MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAILFRLKMGLNKYGPAVSGLSAPGSAAAGSASAEAKEAEKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Homology
[Close]
BLAST of Bhi03G000797 vs. Swiss-Prot
Match: sp|P41189|RL7_LIBAF (50S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.4e-13
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 98  KTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEK 157
           KT F++ LE FDA  KI +IKEVR  T+LGLKEAKD VE  P  LK GV+KD+   + +K
Sbjct: 55  KTEFEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAPKSLKTGVSKDEAEELKKK 114

Query: 158 LKELGATAVL 168
           L+  GAT +L
Sbjct: 115 LEAAGATIIL 124

[Close]
BLAST of Bhi03G000797 vs. Swiss-Prot
Match: sp|Q9L5W4|RL7_LIBAC (50S ribosomal protein L7/L12 OS=Liberibacter africanus subsp. capensis OX=119494 GN=rplL PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 0 

Query: 98  KTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEK 157
           KT F++ LE FDA +KI +IKEVR+ TDLGLKEAK+LVE +   L+ GV+KD+ N + +K
Sbjct: 54  KTEFEVFLESFDAKSKISVIKEVRSITDLGLKEAKELVEALLKSLRTGVSKDEANELKKK 113

Query: 158 LKELGATAVL 168
           L+  GAT  L
Sbjct: 114 LEAAGATISL 123

[Close]
BLAST of Bhi03G000797 vs. Swiss-Prot
Match: sp|Q1XDE8|RK12_PYRYE (50S ribosomal protein L12, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rpl12 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-11
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 0 

Query: 98  KTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEK 157
           KT FD+ LE+  A  KI ++K VR  T LGLKEAKDLVE  P VLK+G +KD    + ++
Sbjct: 59  KTEFDVVLEEVPAPKKISVLKVVRPLTGLGLKEAKDLVESTPKVLKEGASKDDAETMKKQ 118

Query: 158 LKELGATAVLE 169
           L++ GAT +++
Sbjct: 119 LEDAGATVIVK 129

[Close]
BLAST of Bhi03G000797 vs. Swiss-Prot
Match: sp|Q7U3T9|RL7_SYNPX (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH8102) OX=84588 GN=rplL PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-11
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 98  KTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEK 157
           KT FD+ LE FDAAAKIK++K VR  T LGL +AK LVE  P  +K+G++KD+   + ++
Sbjct: 61  KTEFDVILESFDAAAKIKVLKAVRNATGLGLGDAKALVEAAPKPIKEGISKDEAEALKKE 120

Query: 158 LKELGATAVLE 169
           ++E+G    L+
Sbjct: 121 IEEVGGKVTLK 131

[Close]
BLAST of Bhi03G000797 vs. Swiss-Prot
Match: sp|P36247|RL7_LIBAS (50S ribosomal protein L7/L12 OS=Liberibacter asiaticus OX=34021 GN=rplL PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.8e-11
Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0 

Query: 40  LERIADELLDLTKIERHDYAILFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKT 99
           +E I ++L  LT IE  + +     + G++   P                        KT
Sbjct: 4   IESIVEKLSSLTLIEAAELSKRLEKEWGVSASAPV-------SVVAPVAAEAGSAASEKT 63

Query: 100 VFDIKLEKF-DAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKL 159
            F++ L+ F D   KI +IKEVR  TDLGLKEAK+LVE  P  LK G++KD+ N + +KL
Sbjct: 64  EFEVVLKGFDDPKKKIAVIKEVRAITDLGLKEAKELVESAPKSLKTGLSKDEANEMKKKL 122

Query: 160 KELGAT 165
           ++ GAT
Sbjct: 124 EDAGAT 122

[Close]
BLAST of Bhi03G000797 vs. TAIR10
Match: AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein)

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-32
Identity = 79/161 (49.07%), Postives = 105/161 (65.22%), Query Frame = 0 

Query: 10  AKALVRLLTVAPRPLLVRSLSTVS--KERTQKLERIADELLDLTKIERHDYAILFRLKMG 69
           +++L  L    P     R L  V+  + RT+KLERIAD+LL L +IE +DY++LF  K+G
Sbjct: 10  SRSLGYLHRTTPLSSATRHLCAVASPEARTKKLERIADDLLKLNRIELYDYSLLFSHKIG 69

Query: 70  LNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEVRTFTDLG 129
           LN+YG AV+                     KT FD+KLEKF+AA+KIK+IKE+R FTDLG
Sbjct: 70  LNRYGSAVA---VTGSVGDASASTETKTAEKTTFDVKLEKFEAASKIKVIKEIRAFTDLG 129

Query: 130 LKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           LKEAK LVEK PV++K G+TK++   I+EKLK +GA   LE
Sbjct: 130 LKEAKALVEKAPVIVKNGLTKEEAEKIMEKLKAVGAIVALE 167

[Close]
BLAST of Bhi03G000797 vs. TAIR10
Match: AT3G06040.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21
Identity = 49/71 (69.01%), Postives = 61/71 (85.92%), Query Frame = 0 

Query: 98  KTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEK 157
           KT FD+KLEKF+A+ KIK+IKEVRTFT LGLKEAK+LVEKVP +LK+GVTK++ N II K
Sbjct: 116 KTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIAK 175

Query: 158 LKELGATAVLE 169
           +K +G  AV+E
Sbjct: 176 IKAVGGIAVME 186

[Close]
BLAST of Bhi03G000797 vs. TAIR10
Match: AT1G70190.1 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like)

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-21
Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 0 

Query: 37  TQKLERIADELLDLTKIERHDYAILFRLKMGLNKYGPAVS----------GXXXXXXXXX 96
           T ++ R+ DE+  LT +E  +   +   K G+ +  P V+           XXXXXXX  
Sbjct: 68  TDRVFRLVDEISSLTLLEISELGSIIMKKKGMTEL-PTVAVMKPGAXXXXXXXXXXXXVS 127

Query: 97  XXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGV 156
                      KTVF+IKLE F+A+AKIKIIKE+R+FTDLGLKEAK LVEK P +LK G+
Sbjct: 128 QSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKALVEKTPAILKAGL 187

Query: 157 TKDQGNPIIEKLKELGATAVLE 169
           +K++G  I+EKLK LGA  VLE
Sbjct: 188 SKEEGEKILEKLKALGAKVVLE 208

[Close]
BLAST of Bhi03G000797 vs. TAIR10
Match: AT4G36420.1 (Ribosomal protein L12 family protein)

HSP 1 Score: 97.8 bits (242), Expect = 6.6e-21
Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 0 

Query: 36  RTQKLERIADELLDLTKIERHDYAILFRLKMGLNKYG------PAVSGXXXXXXXXXXXX 95
           +++ + +I +EL +LT +E  D   + R K+ +++        P +S             
Sbjct: 41  QSENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAAMMPGMSLPGSGASKSAGGE 100

Query: 96  XXXXXXXXKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKD 155
                   KT FD+ L+ +DA +KIK+IKEVRT T LGLKEAKDLVEK P +LKKGV+K+
Sbjct: 101 GKEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLKEAKDLVEKAPTLLKKGVSKE 160

Query: 156 QGNPIIEKLKELGATAVLE 169
           +   IIEKLK +GA   +E
Sbjct: 161 EAEKIIEKLKAVGAKVAME 179

[Close]
BLAST of Bhi03G000797 vs. TAIR10
Match: AT2G03130.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein)

HSP 1 Score: 84.3 bits (207), Expect = 7.6e-17
Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 0 

Query: 98  KTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEK 157
           KTVF++KLE F+A AKIKIIKEVR    +GLKEA  LV K P VLK G++K++G  ++EK
Sbjct: 21  KTVFEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAPTVLKTGLSKEEGEEVVEK 80

Query: 158 LKELGATAVLE 169
           L  LGA AVL+
Sbjct: 81  LNALGAEAVLQ 91

[Close]
BLAST of Bhi03G000797 vs. TrEMBL
Match: tr|A0A0A0KLI9|A0A0A0KLI9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495700 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.1e-65
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           MPSIASKLPAK+LVRLLTVAPRPLLVRSLSTV++ERTQKLERIADELLDLTKIERHDYAI
Sbjct: 1   MPSIASKLPAKSLVRLLTVAPRPLLVRSLSTVAEERTQKLERIADELLDLTKIERHDYAI 60

Query: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120
           LFR KMGLNKYGPAVS XXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV
Sbjct: 61  LFRYKMGLNKYGPAVSXXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120

Query: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Sbjct: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168

[Close]
BLAST of Bhi03G000797 vs. TrEMBL
Match: tr|A0A1S3B113|A0A1S3B113_CUCME (50S ribosomal protein L7/L12 OS=Cucumis melo OX=3656 GN=LOC103484859 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.4e-64
Identity = 160/168 (95.24%), Postives = 164/168 (97.62%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           MPSIASKLPAK+LVRLLT+APRPLLVRSLSTV++ERTQKLERIADELLDL KIERHDYAI
Sbjct: 1   MPSIASKLPAKSLVRLLTIAPRPLLVRSLSTVAEERTQKLERIADELLDLNKIERHDYAI 60

Query: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120
           LF  KMGLNKYGPAVS XXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV
Sbjct: 61  LFGYKMGLNKYGPAVSXXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120

Query: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Sbjct: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168

[Close]
BLAST of Bhi03G000797 vs. TrEMBL
Match: tr|F6HWW7|F6HWW7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s1232g00020 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46
Identity = 130/170 (76.47%), Postives = 142/170 (83.53%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           M SI +++P K LVR L  A    L  + +T     TQKLERIADELLDLTK+ER+DY+I
Sbjct: 1   MHSITTRIPYKTLVRPLFFAQSRNLCSASAT-----TQKLERIADELLDLTKLERYDYSI 60

Query: 61  LFRLKMGLNKYGPAVSG--XXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIK 120
           LFRLK+GLNKYGPAVSG    XXXXXXXXXXXXXXXX  KT FDIKLEKFDAAAKIKIIK
Sbjct: 61  LFRLKLGLNKYGPAVSGLASAXXXXXXXXXXXXXXXXAEKTAFDIKLEKFDAAAKIKIIK 120

Query: 121 EVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           EVRTFTDLGLKEAKDLVEK PVVLKKGVTK++GNPI+EKLKELGAT VLE
Sbjct: 121 EVRTFTDLGLKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLKELGATVVLE 165

[Close]
BLAST of Bhi03G000797 vs. TrEMBL
Match: tr|A0A2N9FPY0|A0A2N9FPY0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20659 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45
Identity = 109/170 (64.12%), Postives = 126/170 (74.12%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           M SI +K+P K+L RL T+  RP L R+L+T ++ RTQKLERIADEL DL KIER+DY++
Sbjct: 1   MSSITTKIPTKSLTRLFTLTRRP-LSRTLNTATETRTQKLERIADELRDLNKIERYDYSV 60

Query: 61  LFRLKMGLNKYGPAVS--GXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIK 120
           L+R KMGLNKYGPAVS  G                    K  FDIKLEK+D AAKIKIIK
Sbjct: 61  LWRYKMGLNKYGPAVSGPGGLGQSASSGSASGEEAKAAEKIAFDIKLEKYDTAAKIKIIK 120

Query: 121 EVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           EVRTFTDLGLKEAKDLVEKVPVVLKKG+TK++  PI+ KLKELGAT  LE
Sbjct: 121 EVRTFTDLGLKEAKDLVEKVPVVLKKGLTKEEAEPILAKLKELGATVHLE 169

[Close]
BLAST of Bhi03G000797 vs. TrEMBL
Match: tr|A0A1R3GEG0|A0A1R3GEG0_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_26533 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.6e-45
Identity = 128/172 (74.42%), Postives = 148/172 (86.05%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLL-TVAPRPLLVRSLSTVSKE-RTQKLERIADELLDLTKIERHDY 60
           M SI +KLP K+++RLL +  P+P + R  ST + E RTQKLERIADELLDLTKIER+DY
Sbjct: 1   MSSITTKLPTKSIIRLLISSPPKPPIFRFFSTATAEDRTQKLERIADELLDLTKIERYDY 60

Query: 61  AILFRLKMGLNKYGPAVSG--XXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKI 120
           +ILFRLK+GL++YGPAVSG    XXXXXXXXXXXXXXXXXXKT FDIKLEKFDA  K+KI
Sbjct: 61  SILFRLKLGLDRYGPAVSGVSSGXXXXXXXXXXXXXXXXXXKTAFDIKLEKFDATVKLKI 120

Query: 121 IKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           IKEVR FTDLGLKEAKDLVEKVPVV+KKGVTK++   I++KL+ELGATAVLE
Sbjct: 121 IKEVRAFTDLGLKEAKDLVEKVPVVVKKGVTKEEAEGIVKKLQELGATAVLE 172

[Close]
BLAST of Bhi03G000797 vs. NCBI nr
Match: XP_004141864.1 (PREDICTED: 50S ribosomal protein L12, cyanelle [Cucumis sativus] >KGN48616.1 hypothetical protein Csa_6G495700 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 1.6e-65
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           MPSIASKLPAK+LVRLLTVAPRPLLVRSLSTV++ERTQKLERIADELLDLTKIERHDYAI
Sbjct: 1   MPSIASKLPAKSLVRLLTVAPRPLLVRSLSTVAEERTQKLERIADELLDLTKIERHDYAI 60

Query: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120
           LFR KMGLNKYGPAVS XXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV
Sbjct: 61  LFRYKMGLNKYGPAVSXXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120

Query: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Sbjct: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168

[Close]
BLAST of Bhi03G000797 vs. NCBI nr
Match: XP_022132437.1 (uncharacterized protein LOC111005295 [Momordica charantia])

HSP 1 Score: 257.3 bits (656), Expect = 3.6e-65
Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVS+ER QKLERIADELL L+KIERHDYAI
Sbjct: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSQERIQKLERIADELLGLSKIERHDYAI 60

Query: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120
           LFRLKMGLNKYGPAVSG XXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV
Sbjct: 61  LFRLKMGLNKYGPAVSGLXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120

Query: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           RTFT+LGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Sbjct: 121 RTFTELGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168

[Close]
BLAST of Bhi03G000797 vs. NCBI nr
Match: XP_022950898.1 (uncharacterized protein LOC111453857 [Cucurbita moschata])

HSP 1 Score: 256.1 bits (653), Expect = 8.0e-65
Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           M SIASKLPAKA VRLLTVA RPLLVRSLSTVS+ERTQKLERIADE+LDLTKIERHDYAI
Sbjct: 1   MSSIASKLPAKASVRLLTVASRPLLVRSLSTVSEERTQKLERIADEMLDLTKIERHDYAI 60

Query: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120
           LFRLKMGLNKYGPAVSG   XXXXXXXXXXXXXX   KTVFDIKLEKFDAAAKIKIIKEV
Sbjct: 61  LFRLKMGLNKYGPAVSGISGXXXXXXXXXXXXXXEAEKTVFDIKLEKFDAAAKIKIIKEV 120

Query: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Sbjct: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168

[Close]
BLAST of Bhi03G000797 vs. NCBI nr
Match: XP_022977261.1 (uncharacterized protein LOC111477630 [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 8.0e-65
Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           M SIASKLPAKALVRLLTVA RPLLVRSLSTVS+ERTQKLERIADE+LDLTKIERHDYAI
Sbjct: 1   MSSIASKLPAKALVRLLTVASRPLLVRSLSTVSEERTQKLERIADEMLDLTKIERHDYAI 60

Query: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120
           LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV
Sbjct: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120

Query: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           RTFT LGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Sbjct: 121 RTFTSLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168

[Close]
BLAST of Bhi03G000797 vs. NCBI nr
Match: XP_023543130.1 (uncharacterized protein LOC111803093 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 152/168 (90.48%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MPSIASKLPAKALVRLLTVAPRPLLVRSLSTVSKERTQKLERIADELLDLTKIERHDYAI 60
           M SI SKLPAKALVR LTVA RPLLVRSLSTVS+ERTQKLERIADE+LDLTKIERHDYAI
Sbjct: 1   MSSIVSKLPAKALVRRLTVASRPLLVRSLSTVSEERTQKLERIADEMLDLTKIERHDYAI 60

Query: 61  LFRLKMGLNKYGPAVSGXXXXXXXXXXXXXXXXXXXXKTVFDIKLEKFDAAAKIKIIKEV 120
           LFRLKMGLNKYGPAVSG    XXXXXXXXXX      KTVFDIKLEKFDAAAKIKIIKEV
Sbjct: 61  LFRLKMGLNKYGPAVSGISAPXXXXXXXXXXVAKEAEKTVFDIKLEKFDAAAKIKIIKEV 120

Query: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 169
           RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE
Sbjct: 121 RTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGATAVLE 168

The following BLAST results are available for this feature:
BLAST of Bhi03G000797 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P41189|RL7_LIBAF6.4e-1355.7150S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=... [more]
sp|Q9L5W4|RL7_LIBAC1.4e-1255.7150S ribosomal protein L7/L12 OS=Liberibacter africanus subsp. capensis OX=119494... [more]
sp|Q1XDE8|RK12_PYRYE4.6e-1149.3050S ribosomal protein L12, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rpl12 P... [more]
sp|Q7U3T9|RL7_SYNPX6.0e-1147.8950S ribosomal protein L7/L12 OS=Synechococcus sp. (strain WH8102) OX=84588 GN=rp... [more]
sp|P36247|RL7_LIBAS7.8e-1136.5150S ribosomal protein L7/L12 OS=Liberibacter asiaticus OX=34021 GN=rplL PE=3 SV=... [more]
BLAST of Bhi03G000797 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37660.13.8e-3249.07Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr... [more]
AT3G06040.11.0e-2169.01Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr... [more]
AT1G70190.12.3e-2147.89Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/a... [more]
AT4G36420.16.6e-2140.29Ribosomal protein L12 family protein[more]
AT2G03130.17.6e-1760.56Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr... [more]
BLAST of Bhi03G000797 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLI9|A0A0A0KLI9_CUCSA1.1e-6597.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495700 PE=4 SV=1[more]
tr|A0A1S3B113|A0A1S3B113_CUCME3.4e-6495.2450S ribosomal protein L7/L12 OS=Cucumis melo OX=3656 GN=LOC103484859 PE=4 SV=1[more]
tr|F6HWW7|F6HWW7_VITVI2.5e-4676.47Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s1232g00020 PE=3 SV=... [more]
tr|A0A2N9FPY0|A0A2N9FPY0_FAGSY1.2e-4564.12Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20659 PE=3 SV=1[more]
tr|A0A1R3GEG0|A0A1R3GEG0_COCAP1.6e-4574.42Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_26533 PE=3 ... [more]
BLAST of Bhi03G000797 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141864.11.6e-6597.02PREDICTED: 50S ribosomal protein L12, cyanelle [Cucumis sativus] >KGN48616.1 hyp... [more]
XP_022132437.13.6e-6596.43uncharacterized protein LOC111005295 [Momordica charantia][more]
XP_022950898.18.0e-6593.45uncharacterized protein LOC111453857 [Cucurbita moschata][more]
XP_022977261.18.0e-6597.02uncharacterized protein LOC111477630 [Cucurbita maxima][more]
XP_023543130.12.3e-6490.48uncharacterized protein LOC111803093 [Cucurbita pepo subsp. pepo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR000206Ribosomal_L7/12
IPR013823Ribosomal_L7/L12_C
IPR014719Ribosomal_L7/12_C/ClpS-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0022900 electron transport chain
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006508 proteolysis
biological_process GO:0032543 mitochondrial translation
biological_process GO:0006839 mitochondrial transport
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005762 mitochondrial large ribosomal subunit
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H
molecular_function GO:0008233 peptidase activity
molecular_function GO:0022857 transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M000797Bhi03M000797mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3DG3DSA:3.30.1390.10coord: 94..167
e-value: 2.8E-24
score: 86.9
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILYSSF54736ClpS-likecoord: 97..167
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 101..167
e-value: 1.3E-20
score: 73.4
IPR013823Ribosomal protein L7/L12, C-terminalPRODOMPD001326coord: 102..162
e-value: 1.0E-13
score: 183.0
NoneNo IPR availablePANTHERPTHR24089FAMILY NOT NAMEDcoord: 25..168
NoneNo IPR availablePANTHERPTHR24089:SF375SUBFAMILY NOT NAMEDcoord: 25..168
IPR000206Ribosomal protein L7/L12CDDcd00387Ribosomal_L7_L12coord: 39..167
e-value: 8.87051E-31
score: 108.782

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi03G000797Csa6G495700Cucumber (Chinese Long) v2cuwgoB621
Bhi03G000797MELO3C007639Melon (DHL92) v3.5.1mewgoB636
Bhi03G000797ClCG01G017620Watermelon (Charleston Gray)wcgwgoB223
Bhi03G000797CSPI06G28950Wild cucumber (PI 183967)cpiwgoB626
Bhi03G000797CmaCh03G009120Cucurbita maxima (Rimu)cmawgoB0798
Bhi03G000797CmoCh07G006560Cucurbita moschata (Rifu)cmowgoB1063
Bhi03G000797Lsi01G008900Bottle gourd (USVL1VR-Ls)lsiwgoB180
Bhi03G000797Cp4.1LG19g10700Cucurbita pepo (Zucchini)cpewgoB0596
Bhi03G000797CsGy6G028420Cucumber (Gy14) v2cgybwgoB591
Bhi03G000797MELO3C007639.2Melon (DHL92) v3.6.1medwgoB643
Bhi03G000797CsaV3_6G044160Cucumber (Chinese Long) v3cucwgoB642
Bhi03G000797Cla014033Watermelon (97103) v1wgowmB426
Bhi03G000797Cla97C01G016790Watermelon (97103) v2wgowmbB397
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi03G000797Wax gourdwgowgoB078
Bhi03G000797Cucumber (Gy14) v1cgywgoB151
Bhi03G000797Cucumber (Gy14) v1cgywgoB703
Bhi03G000797Cucumber (Gy14) v1cgywgoB786
Bhi03G000797Cucumber (Gy14) v2cgybwgoB182
Bhi03G000797Cucumber (Gy14) v2cgybwgoB378
Bhi03G000797Cucurbita maxima (Rimu)cmawgoB0023
Bhi03G000797Cucurbita maxima (Rimu)cmawgoB0217
Bhi03G000797Cucurbita maxima (Rimu)cmawgoB0446
Bhi03G000797Cucurbita maxima (Rimu)cmawgoB0884
Bhi03G000797Cucurbita maxima (Rimu)cmawgoB1070
Bhi03G000797Cucurbita moschata (Rifu)cmowgoB0015
Bhi03G000797Cucurbita moschata (Rifu)cmowgoB0213
Bhi03G000797Cucurbita moschata (Rifu)cmowgoB0444
Bhi03G000797Cucurbita moschata (Rifu)cmowgoB0580
Bhi03G000797Cucurbita moschata (Rifu)cmowgoB0792
Bhi03G000797Cucurbita moschata (Rifu)cmowgoB0880
Bhi03G000797Cucurbita pepo (Zucchini)cpewgoB0084
Bhi03G000797Cucurbita pepo (Zucchini)cpewgoB0304
Bhi03G000797Cucurbita pepo (Zucchini)cpewgoB0547
Bhi03G000797Cucurbita pepo (Zucchini)cpewgoB0987
Bhi03G000797Cucurbita pepo (Zucchini)cpewgoB1051
Bhi03G000797Wild cucumber (PI 183967)cpiwgoB188
Bhi03G000797Wild cucumber (PI 183967)cpiwgoB399
Bhi03G000797Cucumber (Chinese Long) v3cucwgoB194
Bhi03G000797Cucumber (Chinese Long) v3cucwgoB401
Bhi03G000797Cucumber (Chinese Long) v2cuwgoB189
Bhi03G000797Cucumber (Chinese Long) v2cuwgoB395
Bhi03G000797Bottle gourd (USVL1VR-Ls)lsiwgoB371
Bhi03G000797Bottle gourd (USVL1VR-Ls)lsiwgoB613
Bhi03G000797Melon (DHL92) v3.6.1medwgoB354
Bhi03G000797Melon (DHL92) v3.6.1medwgoB596
Bhi03G000797Melon (DHL92) v3.5.1mewgoB354
Bhi03G000797Melon (DHL92) v3.5.1mewgoB590
Bhi03G000797Watermelon (Charleston Gray)wcgwgoB640
Bhi03G000797Watermelon (97103) v2wgowmbB444
Bhi03G000797Watermelon (97103) v1wgowmB414
Bhi03G000797Silver-seed gourdcarwgoB0003
Bhi03G000797Silver-seed gourdcarwgoB0405
Bhi03G000797Silver-seed gourdcarwgoB0464
Bhi03G000797Silver-seed gourdcarwgoB0491
Bhi03G000797Silver-seed gourdcarwgoB0553
Bhi03G000797Silver-seed gourdcarwgoB0903