Expression of Cp4.1LG10g08730 [Cucurbita pepo (MU-CU-16) v4.1]

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PRJNA838740: Transcriptome profiling of fruit exocarp treated with ABA and then stored in cold (strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN28462261Cucurbita pepo subsp. pepoSinatraExocarp of fruit submerged in distilled water, desiccated for 2 h and then stored in cold for 1 d118.65
SAMN28462252Cucurbita pepo subsp. pepoSinatraExocarp of fruit submerged in 0.5 mM of ABA, desiccated for 2 h and then stored in cold for 1 d113.8
SAMN28462264Cucurbita pepo subsp. pepoSinatraExocarp of fruit submerged in distilled water, desiccated for 2 h and then stored in cold for 5 d234.75
SAMN28462255Cucurbita pepo subsp. pepoSinatraExocarp of fruit submerged in 0.5 mM of ABA, desiccated for 2 h and then stored in cold for 5 d249.99
SAMN28462258Cucurbita pepo subsp. pepoSinatraExocarp of fruit submerged in distilled water, desiccated for 2 h and then stored in cold for 14 d244.81
SAMN28462249Cucurbita pepo subsp. pepoSinatraExocarp of fruit submerged in 0.5 mM of ABA, desiccated for 2 h and then stored in cold for 14 d263.55
SAMN28462267Cucurbita pepo subsp. pepoSinatraExocarp of freshly harvested fruit80.1
PRJNA726825: Transcriptome responses to copper oxide (CuO) nanoparticles (strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN18962951Cucurbita pepoCostata RomanescoPollen from zucchini grown in pot soil for 60 days31.76
SAMN18962960Cucurbita pepoCostata RomanescoPollen from zucchini grown in pot soil for 60 days, with addition of CuSO4 5H2O (320 mg kg-1)59.89
SAMN18962949Cucurbita pepoCostata RomanescoPollen from zucchini grown in pot soil for 60 days, with addition of CuO raw material (100 mg kg-1)70.12
SAMN18962950Cucurbita pepoCostata RomanescoPollen from zucchini grown in pot soil for 60 days, with addition of CuO nanoparticles (100 mg kg-1)49.74
SAMN18962955Cucurbita pepoCostata RomanescoLeaf from zucchini grown in pot soil for 60 days453.56
SAMN18962952Cucurbita pepoCostata RomanescoLeaf from zucchini grown in pot soil for 60 days, with addition of CuSO4 5H2O (320 mg kg-1)373.84
SAMN18962953Cucurbita pepoCostata RomanescoLeaf from zucchini grown in pot soil for 60 days, with addition of CuO raw material (100 mg kg-1)830.55
SAMN18962954Cucurbita pepoCostata RomanescoLeaf from zucchini grown in pot soil for 60 days, with addition of CuO nanoparticles (100 mg kg-1)361.93
SAMN18962959Cucurbita pepoCostata RomanescoRoot from zucchini grown in pot soil for 60 days506.81
SAMN18962956Cucurbita pepoCostata RomanescoRoot from zucchini grown in pot soil for 60 days, with addition of CuSO4 5H2O (320 mg kg-1)509.13
SAMN18962957Cucurbita pepoCostata RomanescoRoot from zucchini grown in pot soil for 60 days, with addition of CuO raw material (100 mg kg-1)886.44
SAMN18962958Cucurbita pepoCostata RomanescoRoot from zucchini grown in pot soil for 60 days, with addition of CuO nanoparticles (100 mg kg-1)506.67
PRJNA439198: Transcriptome responses to Aphis gossypii feeding (strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN08742113Cucurbita pepo subsp. pepoSan PasqualeLeaf of uninfested zucchini plant at 24h215.82
SAMN08742104Cucurbita pepo subsp. pepoSan PasqualeLeaf of infested zucchini plant after 24h of Aphis gossypii feeding292.41
SAMN08742116Cucurbita pepo subsp. pepoSan PasqualeLeaf of uninfested zucchini plant at 48h207.19
SAMN08742107Cucurbita pepo subsp. pepoSan PasqualeLeaf of infested zucchini plant after 48h of Aphis gossypii feeding345.77
SAMN08742119Cucurbita pepo subsp. pepoSan PasqualeLeaf of uninfested zucchini plant at 96h198.18
SAMN08742110Cucurbita pepo subsp. pepoSan PasqualeLeaf of infested zucchini plant after 96h of Aphis gossypii feeding195.92
PRJNA669995: Transcriptome responses to ZYMV (strand-specific)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN16474370Cucurbita pepoTrue FrenchLeaf of susceptible line at 12 days post inoculation of ZYMV331.45
SAMN16474372Cucurbita pepo381eLeaf of resistant line at 12 days post inoculation of ZYMV456.69
PRJNA339848: Comparative transcriptome analysis of fruit development in acorn squash and oilseed pumpkin (non-strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN05608084Cucurbita pepoLady GodivaFruit mesocarp at 5 days after pollination297.75
SAMN05608086Cucurbita pepoLady GodivaFruit mesocarp at 10 days after pollination458.43
SAMN05608088Cucurbita pepoLady GodivaFruit mesocarp at 15 days after pollination278.53
SAMN05608090Cucurbita pepoLady GodivaFruit mesocarp at 20 days after pollination171.63
SAMN05608092Cucurbita pepoLady GodivaFruit mesocarp at 40 days after pollination131.11
SAMN05608094Cucurbita pepoSweet REBAFruit mesocarp at 5 days after pollination344.04
SAMN05608096Cucurbita pepoSweet REBAFruit mesocarp at 10 days after pollination459.33
SAMN05608098Cucurbita pepoSweet REBAFruit mesocarp at 15 days after pollination253.21
SAMN05608100Cucurbita pepoSweet REBAFruit mesocarp at 20 days after pollination141.18
SAMN05608102Cucurbita pepoSweet REBAFruit mesocarp at 40 days after pollination173.84
SAMN05608085Cucurbita pepoLady GodivaSeed at 5 days after pollination586.97
SAMN05608087Cucurbita pepoLady GodivaSeed at 10 days after pollination572.38
SAMN05608089Cucurbita pepoLady GodivaSeed at 15 days after pollination453.44
SAMN05608091Cucurbita pepoLady GodivaSeed at 20 days after pollination349.56
SAMN05608093Cucurbita pepoLady GodivaSeed at 40 days after pollination134.25
SAMN05608095Cucurbita pepoSweet REBASeed at 5 days after pollination496.86
SAMN05608097Cucurbita pepoSweet REBASeed at 10 days after pollination493.02
SAMN05608099Cucurbita pepoSweet REBASeed at 15 days after pollination347.04
SAMN05608101Cucurbita pepoSweet REBASeed at 20 days after pollination334.38
SAMN05608103Cucurbita pepoSweet REBASeed at 40 days after pollination140.61
PRJNA499783: PRJNA499783Fruit transcriptomes of parthenocarpic and non-parthenocarpic cultivars (non-strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN10345060Cucurbita pepoMUCU-16Unpollinated fruit of non-parthenocarpic cultivar727.44
SAMN10345061Cucurbita pepoMUCU-16Pollinated fruit of non-parthenocarpic cultivar1309.88
SAMN10345062Cucurbita pepoMUCU-16Auxin treated fruit of non-parthenocarpic cultivar755.66
SAMN10345063Cucurbita pepoWhitakerUnpollinated fruit of parthenocarpic cultivar508.47
SAMN10345064Cucurbita pepoWhitakerPollinated fruit of parthenocarpic cultivar1293.16
SAMN10345065Cucurbita pepoWhitakerAuxin treated fruit of parthenocarpic cultivar703.54
PRJNA386743: Transcriptomes of young leaves from different Cucurbita lines (strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN07224650Cucurbita pepoCATIE-11368Young leaves207.85
SAMN07224653Cucurbita pepoCATIE-18887Young leaves103.39
SAMN07224674Cucurbita pepoPI 532354Young leaves960.76
SAMN07224680Cucurbita pepoPI 614701Young leaves367.7
SAMN07224681Cucurbita pepoPI 615111Young leaves741.92
PRJNA663796: Transcriptome profiling of different squash tissues (non-strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN16179729Cucurbita pepoKompokolokythoFruit at 2 days after pollination424.57
SAMN16179730Cucurbita pepoKompokolokythoFruit at 7 days after pollination490.42
SAMN16179731Cucurbita pepoKompokolokythoFruit at 10 days after pollination480.55
SAMN16179732Cucurbita pepoKompokolokythoFruit at 15 days after pollination550.83
SAMN16179733Cucurbita pepoKompokolokythoFruit at 20 days after pollination418.76
SAMN16179734Cucurbita pepoKompokolokythoFruit at 30 days after pollination384.42
SAMN16179735Cucurbita pepoKompokolokythoFruit at 40 days after pollination348.89
SAMN16179722Cucurbita pepoKompokolokythoSeed467.22
SAMN16179723Cucurbita pepoKompokolokythoShoot490
SAMN16179724Cucurbita pepoKompokolokythoStem654.99
SAMN16179725Cucurbita pepoKompokolokythoYoung leaf1235.25
SAMN16179726Cucurbita pepoKompokolokythoDeveloped leaf848.27
SAMN16179727Cucurbita pepoKompokolokythoMale flower461.84
SAMN16179728Cucurbita pepoKompokolokythoFemale flower832.65
SAMN16179736Cucurbita pepoKompokolokythoPrimary root699.84
SAMN16179737Cucurbita pepoKompokolokythoLateral root610.59
PRJNA437911: Transcriptomes of female and male nectaries at different stages of floral maturation (non-strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN08687067Cucurbita pepoNAMale nectaries at full anthesis, 2-3 hr after dawn (secretory)372.44
SAMN08687100Cucurbita pepoNAMale nectaries at 9 hr after the 'secretory' stage221.34
SAMN08687068Cucurbita pepoNAMale nectaries at 15 hr prior to anthesis (nectar secretion)316.66
SAMN08687071Cucurbita pepoNAMale nectaries at 24 hr prior to anthesis (nectar secretion)349.39
SAMN08687077Cucurbita pepoNAFemale nectaries at full anthesis, 2-3 hr after dawn (secretory)353.92
SAMN08687074Cucurbita pepoNAFemale nectaries at 9 hr after the 'secretory' stage114.17
SAMN08687080Cucurbita pepoNAFemale nectaries at 15 hr prior to anthesis (nectar secretion)483.45
SAMN08687082Cucurbita pepoNAFemale nectaries at 24 hr prior to anthesis (nectar secretion)816.58
PRJNA752874: Seed coat transcriptome of hulled and hulless ecotypes (non-strand-specific)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN20665548Cucurbita pepoNASeed coat of hulled ecotype at 8 days after pollination276.96
SAMN20665551Cucurbita pepoNASeed coat of hulled ecotype at 18 days after pollination313.77
SAMN20665554Cucurbita pepoNASeed coat of hulled ecotype at 28 days after pollination247.29
SAMN20665557Cucurbita pepoNASeed coat of hulless ecotype at 8 days after pollination235.92
SAMN20665560Cucurbita pepoNASeed coat of hulless ecotype at 18 days after pollination506.67
SAMN20665563Cucurbita pepoNASeed coat of hulless ecotype at 28 days after pollination220.94
PRJNA843470: Seed coat transcriptome of hulled and hulless ecotypes (non-strand-specific; Publication)DownloadShow/hide expression
Sample IDSpeciesGenotypeDescriptionExpression (FPKM)
SAMN28743097Cucurbita pepoHhulled seed coat at 5 days after pollination105.84
SAMN28743088Cucurbita pepoHLhulled-less seed coat at 5 days after pollination139.73
SAMN28743094Cucurbita pepoHhulled seed coat at 10 days after pollination337.07
SAMN28743085Cucurbita pepoHLhulled-less seed coat at 10 days after pollination155.87
SAMN28743091Cucurbita pepoHhulled seed coat at 20 days after pollination229.39
SAMN28743082Cucurbita pepoHLhulled-less seed coat at 20 days after pollination256.13