MELO3C014337 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014337
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	mRNA-binding family protein
Location	chr5 : 3566978 .. 3571016 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCCCACAGATTTCCTTCTAACAATTATTTGATTCCATGGCTGCTCTTCCTTTCTCATCTTCCCTTTTCTCTTCCAAGCCTTCCATCTATTTCCCATCTCCTATTTCTCCTTCTTTTACTCCTCTTTCACTTTCTCCAATCTCTAACTCTTCTCCTATTTCTTCTTCTTTCTCCATTTCCCATTCTAATTTTCTCTCCAATTACTCTTCGTCTTCTTCTTCTTTTAGACCCTCCACTGTCTGTTCCTTTAGTGTCAGGGCTAGCTCTTCTACCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAAGAGCTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTGGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGTTAGTAATTCTAAACCTTTTCTTTTACATGGTTTTTCGTTTCTGTATTCTCTAACATTCATAGTCTAGGGAGATCCAAAATCAGTGGTTGTTAACTGTTCCTGATCTATCCATGTTTGATTGACAATTCACATTCACATTCTGTTTTTTCGTTTGAAGACTGTTTCCCAAATTCTTAAAAAAGCTATTTTTATGCTTCATTGTATCATGATTTTTAATGGTAAATTTTAGGAGGGAAATAGGTTTTAATAAAATATTTACAAAATATAAAAAAAATTCAAATTCTATTAATGGTAGACATTGATAGAACTAATATACTTCTATCAACATGATTGATAGACAGTAATAGAAGTATATCAGTATTATTATTAATAGAATCCAAAATTTTACTATATATTAATAAATATTTTAGTATATTTTAACATATTTAAAAATGTCTCACTTAAAGATGTAGAATTATATTAAAAAAGTTATTGCAAATGATAAATTCTTAAAAATATTTACAATTGTAGCAACTAATTAGAGATACATCGATAGAAGTCTATGAGTATATGTTGTTAATAAATCTCAAATTCTATTATTTTTAAAAATTAATTTGGTTCAATTTTCTATTCGTGAAAATAAGCCATTATATTAAAATAAAGATAAAAACATTTTTGAGATAAAAGAATGTATATATATATATATATTAAAAGTAATATAATGTATTACACAATGTATTATAAATTGTATAACACAAAATAATAATTATATAAGTTTTTCAAATATAAATCATATTTCTATTTGTGATAGTTTAATGTCTACTAAATATTAAATATTAGTAGTAATCGGATGATTTACAAATATATAGTACCAAATACATTTTAAATAATTGTTTATATTAGAATTTAATTTCTAAATGTATTGTTCACATAGTAGATATAAAAAAATGAAATACAATTATGTTTTTTCAAAGTCTCTATCAAACATGTTTTTATTCAAAATAATAGATTCAATGAAGACATAGTTATATCATTGCTTTTAAATTCTCTACCAAACAAGCTCTTAAATCATTGATTGATCTAAAAATTAAATCGATGAATAAATGGGGATGGTGTGTTAGGAAATTGTGAGTGGTGGAGGCAAGACCGTATGGGGAGATCCAGCTGAAATTGGGAAGGTTCTTGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGTTTGTGAAATTTTACTTCTTTTCTCTCATCCTTTCTAGTTGTTTGTGTGATATTCTATACATTTAAAGAAAAAATACTTGGATGTATTTATAACTTGTGTGACAGATTTTGCTTTTTGGTTCCTTTATATGAGTGGTGAGAAGGGATTTACAAAATAAGCGATGTCTGGAATGCATCTAAGTATTACCCTTTAAGAATTTAATAGGTTTTTATTAATATCAACCCACCTTTCAAGTATTAAAATAAAATATCTGTTTATGGAGGATGAAGGTATCCGAAGAAATGGTGAGTAAGAATCGAATACACTAGCAAATTGATCTTACAACTAGATACAGTAGTTACATTACACACCGTTGTCAAATTAAAAAATTACAGTACACACTATGTTTACAATACCCACATAATAATATTCAGACTCAAAAAGTAAGTAAAACGATATAACAAGACTTATAAATTGAAAGAACTAGAAAATCTTAAGATCTTGTAGAAACATCAACAAGTAATTGAGGCACGATTTTGATAAGTTTGTCCTAAAGACAATTATTCATTATACACGAGTTGGAAACAAACTACAGCGACCATCAATGGATTGCATCGAATTGTTATTTATAGGTTAGTAAATAAGTAACTATCTAAATTAAGAAATAAAATCAGATAAATGCAAAATTAGAGCACCCAATTGAGATATCATTTGAACAAAATCAAAGTACATAAATCATTCAGATGGAAGAAACTACGTATATAACACGTGAGGAAAGTTCAATATATAAACTAAACATCGTATGATTTGATGGGTCAATCTAACTGAAAATTTTACCCATAAATTCAATCTACATACTAAATCCTTGTAATTTTTCATATCTTTCACAACATTATTAAAAACCATCATGAGAAATTCACATAGCAGACAAACCAAAACATGAAGGATACTCTTTGTTACAAAAATTTTTGCAAGGCAAGAAGATTTAAACCTTAAAAATCAACTACAACCATGCTATAATTCTATCTAAGCTGCCAATTGACCTATATCTTTGACACAGGCCTGTTATTGATTGGGCAAAGAGCTCCGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATCTATAAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGTAAACATTACAGTTTCAATATGATCCTATCAGCATATATAATATATAGATTTAAATTTACATTACATTTTCTCAGCCAACAAGGTAAACACTTACAGAATGTTAATCTGCATCATTACTGTGACAGGATCTTGTTAAAGCTGACGCTGGCCATGTTGGTGTTGAGAAATATATGGCGGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAATACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGACAGTAAGAGCACACATCTTTATAAACCTGTAAAGTATTTAGACATATCTAACCTTGATTGATGAGTCATGGACTTGATAAATCCTCGATGTAGGAATTGTCCGGGACAGACCGATTCCAATTCCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGCGTAACCGATCGAGCAGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCTGTTAACATAGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGGTGAGTACATAAAATGAAATGGTTCCTTTGCTGCTCTGTTTGAGAAAACTGAAGATTAAAGTGAAACAAAAAAAAAAAAAAAAAAAAAGTTAGATATCAACTCTAAGATATTTGTACCTTTTTTCTGTAGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTTAGGGTGGAAAAGCACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAAGCTATTAAGTTTGAATTAGATGATAAGATACTTGAGTCCTTAAAAGTTCCAGTAGCTGCTTAACCCTTCGGATAATTGTGCAAAACATAGCACTCCAAATCTTACAGTACTTTTGTATATGTATTCTCATTTATTGTACTTCTATCAACTTACCAAAATAAAATGATTTTGAGAGCTGAAGTTTGTTCCCTCATTTCTTATTTTTTGTATTTATAGAAGAAACCAAAGAAAGTAGTATAGATTGCATATATTCCCAGGCTCTCTAGCTCTCTACCAAACAAATGTGGATAATGTACCGGCAGTTCTAATTCATTTCTGGTAAAATATATCAAAGTAAACATTGCACTCT

mRNA sequence

ATCTCCCACAGATTTCCTTCTAACAATTATTTGATTCCATGGCTGCTCTTCCTTTCTCATCTTCCCTTTTCTCTTCCAAGCCTTCCATCTATTTCCCATCTCCTATTTCTCCTTCTTTTACTCCTCTTTCACTTTCTCCAATCTCTAACTCTTCTCCTATTTCTTCTTCTTTCTCCATTTCCCATTCTAATTTTCTCTCCAATTACTCTTCGTCTTCTTCTTCTTTTAGACCCTCCACTGTCTGTTCCTTTAGTGTCAGGGCTAGCTCTTCTACCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAAGAGCTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTGGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGAAATTGTGAGTGGTGGAGGCAAGACCGTATGGGGAGATCCAGCTGAAATTGGGAAGGTTCTTGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGCCTGTTATTGATTGGGCAAAGAGCTCCGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATCTATAAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGATCTTGTTAAAGCTGACGCTGGCCATGTTGGTGTTGAGAAATATATGGCGGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAATACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGACAGAATTGTCCGGGACAGACCGATTCCAATTCCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGCGTAACCGATCGAGCAGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCTGTTAACATAGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTTAGGGTGGAAAAGCACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAAGCTATTAAGTTTGAATTAGATGATAAGATACTTGAGTCCTTAAAAGTTCCAGTAGCTGCTTAACCCTTCGGATAATTGTGCAAAACATAGCACTCCAAATCTTACAGTACTTTTGTATATGTATTCTCATTTATTGTACTTCTATCAACTTACCAAAATAAAATGATTTTGAGAGCTGAAGTTTGTTCCCTCATTTCTTATTTTTTGTATTTATAGAAGAAACCAAAGAAAGTAGTATAGATTGCATATATTCCCAGGCTCTCTAGCTCTCTACCAAACAAATGTGGATAATGTACCGGCAGTTCTAATTCATTTCTGGTAAAATATATCAAAGTAAACATTGCACTCT

Coding sequence (CDS)

ATGGCTGCTCTTCCTTTCTCATCTTCCCTTTTCTCTTCCAAGCCTTCCATCTATTTCCCATCTCCTATTTCTCCTTCTTTTACTCCTCTTTCACTTTCTCCAATCTCTAACTCTTCTCCTATTTCTTCTTCTTTCTCCATTTCCCATTCTAATTTTCTCTCCAATTACTCTTCGTCTTCTTCTTCTTTTAGACCCTCCACTGTCTGTTCCTTTAGTGTCAGGGCTAGCTCTTCTACCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAAGAGCTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTGGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGAAATTGTGAGTGGTGGAGGCAAGACCGTATGGGGAGATCCAGCTGAAATTGGGAAGGTTCTTGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGCCTGTTATTGATTGGGCAAAGAGCTCCGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATCTATAAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGATCTTGTTAAAGCTGACGCTGGCCATGTTGGTGTTGAGAAATATATGGCGGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAATACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGACAGAATTGTCCGGGACAGACCGATTCCAATTCCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGCGTAACCGATCGAGCAGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCTGTTAACATAGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTTAGGGTGGAAAAGCACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAAGCTATTAAGTTTGAATTAGATGATAAGATACTTGAGTCCTTAAAAGTTCCAGTAGCTGCTTAA

Protein sequence

MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA*

Homology

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BLAST of MELO3C014337 vs. Swiss-Prot
Match: CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 4.4e-169
Identity = 309/411 (75.18%), Postives = 339/411 (82.48%), Query Frame = 1


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAAL  SS  FSSK +    SPIS    P SL   S  S  SSSFS   S+  S+ S  +
Sbjct: 1   MAALSSSSLFFSSKTT----SPISNLLIPPSLHRFSLPSS-SSSFSSLSSSSSSSSSLLT 60

Query: 61  SSFRPSTVCS---FSVRASS-STKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTV 120
            S R S   S   F+V+ASS   KK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTV
Sbjct: 61  FSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTV 120

Query: 121 GEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPV 180
           G++SS+KM KPPFNRFSEIVSGGGKTVWG+PA +  V+ G +FDVVLDNNGKD+DTVRPV
Sbjct: 121 GDESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPV 180

Query: 181 IDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRP 240
           +DWAKSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VEKY+AE F +WA FRP
Sbjct: 181 VDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRP 240

Query: 241 QYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHS 300
           QYMIGSGNNKDCEEWFFDRIVRDR +PIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  
Sbjct: 241 QYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASG 300

Query: 301 NIFNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAA 360
           NIFNCV+DRAVTLDGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA
Sbjct: 301 NIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAA 360

Query: 361 QEILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           +++LGW+S TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 361 KDLLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPVAA 406

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BLAST of MELO3C014337 vs. Swiss-Prot
Match: CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.0e-48
Identity = 119/330 (36.06%), Postives = 174/330 (52.73%), Query Frame = 1


Query: 76  SSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQSSDKMNKPPFNRFSEI 135
           S+S++KK+LI+    GG   IG + ++ L+  GH+VT+ T G+    K      ++    
Sbjct: 49  SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFAD 108

Query: 136 VSGGGKTVWGDPAEIGKV---LEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFIS 195
            S     + GD  +   V   L    FDVV D NG++ + V P+++      ++Q+++ S
Sbjct: 109 FSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIYCS 168

Query: 196 SAGIYKPTDEPPHVEGDLVKADAGHVG---VEKYMAEVFSSWAIFRPQYMIGSGNNKDCE 255
           SAG+Y  +D  PH E D V   + H G    E  +     +W   RP Y+ G  N    E
Sbjct: 169 SAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVE 228

Query: 256 EWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTL 315
           EWFF R+   RPIP+P SG+Q++ + HV+DL++   L V   ++A   IFN   ++ VT 
Sbjct: 229 EWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYVTF 288

Query: 316 DGMAKLCAQAAGRPV-NIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNL 375
           DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK   +L
Sbjct: 289 DGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL 348

Query: 376 PEDLKERFEEYVKIGRDKKAIKFELDDKIL 399
            E L + +      G  +K   F  DD IL
Sbjct: 349 VEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

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BLAST of MELO3C014337 vs. TrEMBL
Match: A0A0A0KE82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408170 PE=4 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 1.3e-220
Identity = 390/409 (95.35%), Postives = 396/409 (96.82%), Query Frame = 1


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSS-- 60
           MAALPFSSSLFSSKPSIYFPS ISPSF   SLSPISNSSPISSSFSISHSNFLSNYSS  
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSSISPSFPHPSLSPISNSSPISSSFSISHSNFLSNYSSFS 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
           SSSSFRPSTV SFSVRASSS KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE
Sbjct: 61  SSSSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKV+EGASFDVVLDNNGKDIDTVRPVID
Sbjct: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVID 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWA+FRPQY
Sbjct: 181 WAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI
Sbjct: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+ RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE
Sbjct: 301 FNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           ILGW+ TTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 361 ILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPVAA 409

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BLAST of MELO3C014337 vs. TrEMBL
Match: W9QVM5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025068 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 2.4e-182
Identity = 319/408 (78.19%), Postives = 356/408 (87.25%), Query Frame = 1


Query: 1   MAALPFSSS-LFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
           MA L  SSS LFSS  +  +  P +   +P     +S+SS +SSS SI  S       + 
Sbjct: 1   MATLASSSSVLFSSPSNTNYLVPSNSQLSPSQRLSLSSSSHLSSSLSICPSLSFVTLPTR 60

Query: 61  SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
            S    +  CSFSVRAS++ KK+VLIVNTNSGGHAVIGFYFAKELLGSGH+VTILTVG++
Sbjct: 61  CSRRFVNPACSFSVRASAADKKRVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGDE 120

Query: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
            SDKM KPPFNRFSEIVS GGKTVWGDPAE+GKV+ GA FDVVLDNNGKD+DTVRPV+DW
Sbjct: 121 GSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVGGAEFDVVLDNNGKDLDTVRPVVDW 180

Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
           AKSSGVK F FISSAGIYKPTDEPPHVEGD+VKADAGHVGVEKY+AEVFSSWA FRPQYM
Sbjct: 181 AKSSGVKHFFFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEVFSSWAAFRPQYM 240

Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
           IGSGNNKDCEEWFFDRIVRDRP+PIPGSG+QLTNI+HV+DLSSML+LAVEKP+ A+ NIF
Sbjct: 241 IGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLTNISHVKDLSSMLSLAVEKPEAANGNIF 300

Query: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
           NCV+DR VTLDG+AKLCAQAAGRPVN+VHYDPKAVG+DAKKAFPFRNMHFYAEPRAA++I
Sbjct: 301 NCVSDRTVTLDGIAKLCAQAAGRPVNVVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDI 360

Query: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           LGW+ TTNLPEDLKERFEEYVKIGRDKK IKFELDDKIL++LKVPVAA
Sbjct: 361 LGWQGTTNLPEDLKERFEEYVKIGRDKKDIKFELDDKILDALKVPVAA 408

[Close]

BLAST of MELO3C014337 vs. TrEMBL
Match: A0A061DQU5_THECC (Chloroplast stem-loop binding protein of 41 kDa isoform 1 OS=Theobroma cacao GN=TCM_004387 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 9.1e-182
Identity = 329/408 (80.64%), Postives = 358/408 (87.75%), Query Frame = 1


Query: 1   MAALPFSSS--LFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSS 60
           MAAL  SSS  LFSS PS   PSP   S  PL    +S SS +SSS SIS S F   Y +
Sbjct: 1   MAALASSSSSLLFSSPPS-KLPSP---SLYPLPRLSLSTSSFLSSSLSISPSFFA--YPT 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
           SS  + PS   SF+V+AS   KKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVG+
Sbjct: 61  SSRRYSPS---SFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGD 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           + SDKM KPPFNRFSEIVS GGKTVWGDPA++GKV+ GA+FDVVLDNNGKD+DTVRPVID
Sbjct: 121 EGSDKMKKPPFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVID 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGV QFL+ISSAGIYKPTDEPPHVEGD+VKADAGHVGVEKY+AE+FSSWAIFRPQY
Sbjct: 181 WAKSSGVDQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           MIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A SNI
Sbjct: 241 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+DRAVTLDGMA+LCA+AAG PV I HYDPKAVG+DAKKAFPFRNMHFY+EPRAA++
Sbjct: 301 FNCVSDRAVTLDGMARLCAEAAGLPVEIAHYDPKAVGIDAKKAFPFRNMHFYSEPRAAKD 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 407
           ILGW  TTNLPEDLKERFEEYVKIGRDK+ ++FELDDKILESLKV VA
Sbjct: 361 ILGWNGTTNLPEDLKERFEEYVKIGRDKEPMQFELDDKILESLKVAVA 399

[Close]

BLAST of MELO3C014337 vs. TrEMBL
Match: B9H883_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23110g PE=4 SV=2)

HSP 1 Score: 644.0 bits (1660), Expect = 1.2e-181
Identity = 322/408 (78.92%), Postives = 356/408 (87.25%), Query Frame = 1


Query: 1   MAAL-PFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
           MA L P SSS   S PS     P   S + LSLS  S  SP+SSS SIS S     +S+ 
Sbjct: 35  MATLAPSSSSPIFSGPSSKLSQPSLSSSSRLSLSSFSQLSPLSSSLSISPS-----FSAY 94

Query: 61  SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
            +  R     SF V+AS++ KKK+LIVNTNSGGHAVIGFYFAKELLGSGHEV+ILTVGE+
Sbjct: 95  PTCSRRLFASSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVGEE 154

Query: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
           SSDKM KPPF+RFSEIV  GGKTVWG+PAE+GK +EGA+FDVVLDNNGKD+DTVRPV+DW
Sbjct: 155 SSDKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVVDW 214

Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
           AKS+GVKQFLFISSAGIYKPTDEPPHVEGD+VKADAGHVGVEKY+AE+FSSWAIFRPQYM
Sbjct: 215 AKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYM 274

Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
           IGSGNNKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHVRDLSSMLTLAVE P+ A  NIF
Sbjct: 275 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGNIF 334

Query: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
           NCV+DRAVTLDGMAKLCAQAAG PV I+HYDPKAVG+DAKKAFPFRNMHFYAEPRAA++I
Sbjct: 335 NCVSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDI 394

Query: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           LGW+ TTNLPEDLKERF+EYVKIGRDKK ++FE+DDKILESLKVPVAA
Sbjct: 395 LGWQGTTNLPEDLKERFDEYVKIGRDKKPMQFEIDDKILESLKVPVAA 437

[Close]

BLAST of MELO3C014337 vs. TrEMBL
Match: M5VVY7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006606mg PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 1.6e-181
Identity = 323/408 (79.17%), Postives = 357/408 (87.50%), Query Frame = 1


Query: 1   MAALPFSSS--LFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSS 60
           MA L  SSS  LFSS  S   P  +S     LSLS  S+ S +SSS SISHS+    Y +
Sbjct: 1   MATLTSSSSSVLFSSTHSNLVPPSLS-HLPRLSLSSSSHFSTLSSSLSISHSSVA--YPA 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
            S  F     CSFS++AS+  KKKVLIVNTN GGHAVIGFYFAKELLGSGH+VT+LTVGE
Sbjct: 61  ISRRFNR---CSFSIKASAGEKKKVLIVNTNGGGHAVIGFYFAKELLGSGHQVTVLTVGE 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           +SSDKM KPPF+RFSEIVS GGKTVWG+PA+IGK+LEG +FDVVL+NNGKD+DTVRPV D
Sbjct: 121 ESSDKMKKPPFSRFSEIVSAGGKTVWGEPADIGKILEGTAFDVVLENNGKDLDTVRPVAD 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGVKQFL+ISSAGIYKPT+EPPHVEGD+VKADA HV VEKY+AE+F SWAIFRPQY
Sbjct: 181 WAKSSGVKQFLYISSAGIYKPTEEPPHVEGDVVKADASHVAVEKYIAEIFGSWAIFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           M+GSGNNKDCEEWFFDRI+RDRP+PIPGSG+QLTNI+HVRDLSSMLTLAVE PD A SNI
Sbjct: 241 MLGSGNNKDCEEWFFDRILRDRPVPIPGSGLQLTNISHVRDLSSMLTLAVENPDAASSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+DRAVTLDG+AKLCAQAAGRPVNIVHYDPKA GVDAKKAFPFRNMHFYAEPRAA+E
Sbjct: 301 FNCVSDRAVTLDGLAKLCAQAAGRPVNIVHYDPKAAGVDAKKAFPFRNMHFYAEPRAAKE 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 407
           +LGWKSTTNL EDLKERFEEY+KIGRDKK IKFELDDKI+ESLKVPVA
Sbjct: 361 VLGWKSTTNLTEDLKERFEEYLKIGRDKKTIKFELDDKIIESLKVPVA 402

[Close]

BLAST of MELO3C014337 vs. TAIR10
Match: AT3G63140.1 (AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa)

HSP 1 Score: 595.5 bits (1534), Expect = 2.5e-170
Identity = 309/411 (75.18%), Postives = 339/411 (82.48%), Query Frame = 1


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAAL  SS  FSSK +    SPIS    P SL   S  S  SSSFS   S+  S+ S  +
Sbjct: 1   MAALSSSSLFFSSKTT----SPISNLLIPPSLHRFSLPSS-SSSFSSLSSSSSSSSSLLT 60

Query: 61  SSFRPSTVCS---FSVRASS-STKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTV 120
            S R S   S   F+V+ASS   KK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTV
Sbjct: 61  FSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTV 120

Query: 121 GEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPV 180
           G++SS+KM KPPFNRFSEIVSGGGKTVWG+PA +  V+ G +FDVVLDNNGKD+DTVRPV
Sbjct: 121 GDESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPV 180

Query: 181 IDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRP 240
           +DWAKSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VEKY+AE F +WA FRP
Sbjct: 181 VDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRP 240

Query: 241 QYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHS 300
           QYMIGSGNNKDCEEWFFDRIVRDR +PIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  
Sbjct: 241 QYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASG 300

Query: 301 NIFNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAA 360
           NIFNCV+DRAVTLDGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA
Sbjct: 301 NIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAA 360

Query: 361 QEILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           +++LGW+S TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 361 KDLLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPVAA 406

[Close]

BLAST of MELO3C014337 vs. TAIR10
Match: AT1G09340.1 (AT1G09340.1 chloroplast RNA binding)

HSP 1 Score: 193.4 bits (490), Expect = 2.8e-49
Identity = 119/330 (36.06%), Postives = 174/330 (52.73%), Query Frame = 1


Query: 76  SSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQSSDKMNKPPFNRFSEI 135
           S+S++KK+LI+    GG   IG + ++ L+  GH+VT+ T G+    K      ++    
Sbjct: 49  SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFAD 108

Query: 136 VSGGGKTVWGDPAEIGKV---LEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFIS 195
            S     + GD  +   V   L    FDVV D NG++ + V P+++      ++Q+++ S
Sbjct: 109 FSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIYCS 168

Query: 196 SAGIYKPTDEPPHVEGDLVKADAGHVG---VEKYMAEVFSSWAIFRPQYMIGSGNNKDCE 255
           SAG+Y  +D  PH E D V   + H G    E  +     +W   RP Y+ G  N    E
Sbjct: 169 SAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVE 228

Query: 256 EWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTL 315
           EWFF R+   RPIP+P SG+Q++ + HV+DL++   L V   ++A   IFN   ++ VT 
Sbjct: 229 EWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYVTF 288

Query: 316 DGMAKLCAQAAGRPV-NIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNL 375
           DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK   +L
Sbjct: 289 DGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDL 348

Query: 376 PEDLKERFEEYVKIGRDKKAIKFELDDKIL 399
            E L + +      G  +K   F  DD IL
Sbjct: 349 VEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: gi|659096967|ref|XP_008449375.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis melo])

HSP 1 Score: 815.8 bits (2106), Expect = 3.3e-233
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60

Query: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120
           SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS
Sbjct: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120

Query: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180
           SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA
Sbjct: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180

Query: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240
           KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI
Sbjct: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240

Query: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300
           GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN
Sbjct: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300

Query: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360
           CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL
Sbjct: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360

Query: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 407

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: gi|449444637|ref|XP_004140080.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis sativus])

HSP 1 Score: 773.5 bits (1996), Expect = 1.9e-220
Identity = 390/409 (95.35%), Postives = 396/409 (96.82%), Query Frame = 1


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSS-- 60
           MAALPFSSSLFSSKPSIYFPS ISPSF   SLSPISNSSPISSSFSISHSNFLSNYSS  
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSSISPSFPHPSLSPISNSSPISSSFSISHSNFLSNYSSFS 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
           SSSSFRPSTV SFSVRASSS KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE
Sbjct: 61  SSSSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKV+EGASFDVVLDNNGKDIDTVRPVID
Sbjct: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVID 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWA+FRPQY
Sbjct: 181 WAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI
Sbjct: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+ RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE
Sbjct: 301 FNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           ILGW+ TTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 361 ILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPVAA 409

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: gi|645259271|ref|XP_008235283.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Prunus mume])

HSP 1 Score: 646.4 bits (1666), Expect = 3.5e-182
Identity = 326/408 (79.90%), Postives = 357/408 (87.50%), Query Frame = 1


Query: 1   MAALPFSSS--LFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSS 60
           MA L  SS   LFSS PS   P  +S     LSLS  S+ S +SSS SISHS+    Y +
Sbjct: 1   MATLTSSSPSVLFSSTPSNLVPPSLS-HLPRLSLSSSSHFSTLSSSLSISHSSVA--YPA 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
            S  F     CSFS++AS+  KKKVLIVNTN GGHAVIGFYFAKELLGSGHEVTILTVGE
Sbjct: 61  ISRRFNR---CSFSIKASAGEKKKVLIVNTNGGGHAVIGFYFAKELLGSGHEVTILTVGE 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           +SSDKM KPPF+RFSEIVS GGKTVWG+PAEIGK+LEG +FDVVL+NNGKD+DTVRPV D
Sbjct: 121 ESSDKMKKPPFSRFSEIVSAGGKTVWGEPAEIGKILEGTAFDVVLENNGKDLDTVRPVAD 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGVKQFL+ISSAGIYKPT+EPPHVEGD+VKADA HV VEKY+AE+F SWAIFRPQY
Sbjct: 181 WAKSSGVKQFLYISSAGIYKPTEEPPHVEGDVVKADASHVAVEKYIAEIFGSWAIFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           M+GSGNNKDCEEWFFDRI+R+RP+PIPGSG+QLTNI+HVRDLSSMLTLAVE PD A SNI
Sbjct: 241 MLGSGNNKDCEEWFFDRILRNRPVPIPGSGLQLTNISHVRDLSSMLTLAVENPDAASSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+DRAVTLDG+AKLCAQAAGRPVNIVHYDPKA GVDAKKAFPFRNMHFYAEPRAA+E
Sbjct: 301 FNCVSDRAVTLDGLAKLCAQAAGRPVNIVHYDPKAAGVDAKKAFPFRNMHFYAEPRAAKE 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 407
           ILGWKSTTNL EDLKERFEEY+KIGRDKK IKFELDDKI+ESLKVPVA
Sbjct: 361 ILGWKSTTNLTEDLKERFEEYLKIGRDKKTIKFELDDKIIESLKVPVA 402

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: gi|703076706|ref|XP_010090403.1| (hypothetical protein L484_025068 [Morus notabilis])

HSP 1 Score: 646.4 bits (1666), Expect = 3.5e-182
Identity = 319/408 (78.19%), Postives = 356/408 (87.25%), Query Frame = 1


Query: 1   MAALPFSSS-LFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
           MA L  SSS LFSS  +  +  P +   +P     +S+SS +SSS SI  S       + 
Sbjct: 1   MATLASSSSVLFSSPSNTNYLVPSNSQLSPSQRLSLSSSSHLSSSLSICPSLSFVTLPTR 60

Query: 61  SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
            S    +  CSFSVRAS++ KK+VLIVNTNSGGHAVIGFYFAKELLGSGH+VTILTVG++
Sbjct: 61  CSRRFVNPACSFSVRASAADKKRVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGDE 120

Query: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
            SDKM KPPFNRFSEIVS GGKTVWGDPAE+GKV+ GA FDVVLDNNGKD+DTVRPV+DW
Sbjct: 121 GSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVGGAEFDVVLDNNGKDLDTVRPVVDW 180

Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
           AKSSGVK F FISSAGIYKPTDEPPHVEGD+VKADAGHVGVEKY+AEVFSSWA FRPQYM
Sbjct: 181 AKSSGVKHFFFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEVFSSWAAFRPQYM 240

Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
           IGSGNNKDCEEWFFDRIVRDRP+PIPGSG+QLTNI+HV+DLSSML+LAVEKP+ A+ NIF
Sbjct: 241 IGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLTNISHVKDLSSMLSLAVEKPEAANGNIF 300

Query: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
           NCV+DR VTLDG+AKLCAQAAGRPVN+VHYDPKAVG+DAKKAFPFRNMHFYAEPRAA++I
Sbjct: 301 NCVSDRTVTLDGIAKLCAQAAGRPVNVVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDI 360

Query: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           LGW+ TTNLPEDLKERFEEYVKIGRDKK IKFELDDKIL++LKVPVAA
Sbjct: 361 LGWQGTTNLPEDLKERFEEYVKIGRDKKDIKFELDDKILDALKVPVAA 408

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: gi|590717461|ref|XP_007050620.1| (Chloroplast stem-loop binding protein of 41 kDa isoform 1 [Theobroma cacao])

HSP 1 Score: 644.4 bits (1661), Expect = 1.3e-181
Identity = 329/408 (80.64%), Postives = 358/408 (87.75%), Query Frame = 1


Query: 1   MAALPFSSS--LFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSS 60
           MAAL  SSS  LFSS PS   PSP   S  PL    +S SS +SSS SIS S F   Y +
Sbjct: 1   MAALASSSSSLLFSSPPS-KLPSP---SLYPLPRLSLSTSSFLSSSLSISPSFFA--YPT 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
           SS  + PS   SF+V+AS   KKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVG+
Sbjct: 61  SSRRYSPS---SFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGD 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           + SDKM KPPFNRFSEIVS GGKTVWGDPA++GKV+ GA+FDVVLDNNGKD+DTVRPVID
Sbjct: 121 EGSDKMKKPPFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVID 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGV QFL+ISSAGIYKPTDEPPHVEGD+VKADAGHVGVEKY+AE+FSSWAIFRPQY
Sbjct: 181 WAKSSGVDQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           MIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A SNI
Sbjct: 241 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+DRAVTLDGMA+LCA+AAG PV I HYDPKAVG+DAKKAFPFRNMHFY+EPRAA++
Sbjct: 301 FNCVSDRAVTLDGMARLCAEAAGLPVEIAHYDPKAVGIDAKKAFPFRNMHFYSEPRAAKD 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 407
           ILGW  TTNLPEDLKERFEEYVKIGRDK+ ++FELDDKILESLKV VA
Sbjct: 361 ILGWNGTTNLPEDLKERFEEYVKIGRDKEPMQFELDDKILESLKVAVA 399

The following BLAST results are available for this feature:

BLAST of MELO3C014337 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CP41A_ARATH	4.4e-169	75.18	Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ...	[more]
CP41B_ARATH	5.0e-48	36.06	Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ...	[more]

BLAST of MELO3C014337 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE82_CUCSA	1.3e-220	95.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408170 PE=4 SV=1	[more]
W9QVM5_9ROSA	2.4e-182	78.19	Uncharacterized protein OS=Morus notabilis GN=L484_025068 PE=4 SV=1	[more]
A0A061DQU5_THECC	9.1e-182	80.64	Chloroplast stem-loop binding protein of 41 kDa isoform 1 OS=Theobroma cacao GN=...	[more]
B9H883_POPTR	1.2e-181	78.92	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23110g PE=4 SV=2	[more]
M5VVY7_PRUPE	1.6e-181	79.17	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006606mg PE=4 SV=1	[more]

BLAST of MELO3C014337 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63140.1	2.5e-170	75.18	chloroplast stem-loop binding protein of 41 kDa	[more]
AT1G09340.1	2.8e-49	36.06	chloroplast RNA binding	[more]

BLAST of MELO3C014337 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096967\|ref\|XP_008449375.1\|	3.3e-233	100.00	PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cuc...	[more]
gi\|449444637\|ref\|XP_004140080.1\|	1.9e-220	95.35	PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cuc...	[more]
gi\|645259271\|ref\|XP_008235283.1\|	3.5e-182	79.90	PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Pru...	[more]
gi\|703076706\|ref\|XP_010090403.1\|	3.5e-182	78.19	hypothetical protein L484_025068 [Morus notabilis]	[more]
gi\|590717461\|ref\|XP_007050620.1\|	1.3e-181	80.64	Chloroplast stem-loop binding protein of 41 kDa isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001509	Epimerase_deHydtase
IPR016040	NAD(P)-bd_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0050662	coenzyme binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0045727	positive regulation of translation
biological_process	GO:0008150	biological_process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0010218	response to far red light
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0009637	response to blue light
biological_process	GO:0010114	response to red light
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0032544	plastid translation
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0010319	stromule
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0048046	apoplast
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0050662	coenzyme binding
molecular_function	GO:0008266	poly(U) RNA binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU49313	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014337T1	MELO3C014337T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU49313	MU49313	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001509	NAD-dependent epimerase/dehydratase, N-terminal domain	PFAM	PF01370	Epimerase	coord: 91..301 score: 3.
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 81..264 score: 2.6
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 79..384 score: 1.93
None	No IPR available	GENE3D	G3DSA:3.90.25.10		coord: 265..380 score: 2.8
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 86..402 score: 1.3E
None	No IPR available	PANTHER	PTHR10366:SF278	CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC	coord: 86..402 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014337	Csa6G408170	Cucumber (Chinese Long) v2	cumeB492
MELO3C014337	Cla006052	Watermelon (97103) v1	mewmB407
MELO3C014337	ClCG07G000270	Watermelon (Charleston Gray)	mewcgB399
MELO3C014337	Cla97C07G128550	Watermelon (97103) v2	mewmbB401
MELO3C014337	CSPI06G21740	Wild cucumber (PI 183967)	cpimeB494
MELO3C014337	Cucsa.137370	Cucumber (Gy14) v1	cgymeB226
MELO3C014337	CmaCh19G000400	Cucurbita maxima (Rimu)	cmameB477
MELO3C014337	CmoCh19G000390	Cucurbita moschata (Rifu)	cmomeB469
MELO3C014337	Lsi05G009340	Bottle gourd (USVL1VR-Ls)	lsimeB361
MELO3C014337	Cp4.1LG15g00370	Cucurbita pepo (Zucchini)	cpemeB237
MELO3C014337	CsGy6G021030	Cucumber (Gy14) v2	cgybmeB433
MELO3C014337	Carg16841	Silver-seed gourd	carmeB0747
MELO3C014337	CsaV3_6G036810	Cucumber (Chinese Long) v3	cucmeB504

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014337	Silver-seed gourd	carmeB0746
MELO3C014337	Cucurbita maxima (Rimu)	cmameB474
MELO3C014337	Cucurbita maxima (Rimu)	cmameB575
MELO3C014337	Cucurbita moschata (Rifu)	cmomeB464
MELO3C014337	Cucurbita moschata (Rifu)	cmomeB465
MELO3C014337	Cucurbita moschata (Rifu)	cmomeB564
MELO3C014337	Cucurbita pepo (Zucchini)	cpemeB234
MELO3C014337	Cucurbita pepo (Zucchini)	cpemeB692