BLAST of CmaCh19G000400 vs. Swiss-Prot
Match:
CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1)
HSP 1 Score: 592.0 bits (1525), Expect = 4.8e-168
Identity = 307/407 (75.43%), Postives = 344/407 (84.52%), Query Frame = 1
Query: 1 MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPS--ALTSSFAISHSFLPFP-S 60
MAAL SSSS F+SK + + + L P L P SS S +L+SS + S S L F
Sbjct: 1 MAAL-SSSSLFFSSKTTSPISNLLIPPSLHRFSLPSSSSSFSSLSSSSSSSSSLLTFSLR 60
Query: 61 SSRRSNVCSFSVRASSA-DKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEES 120
+SRR + F+V+ASS +KKNVLIVNTNSGGHAVIGFYFAK+LL +GH VTILTVG+ES
Sbjct: 61 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 120
Query: 121 SDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWA 180
S+KMKKPPFNRFSEIVS GGKTVWG+PA V VV G +FDVVLDNNGKD+D+VRPV+DWA
Sbjct: 121 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 180
Query: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMI 240
KSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VE+Y+AE F +WA FRPQYMI
Sbjct: 181 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 240
Query: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFN 300
GSGNNKDCEEWFFDRIVRDR +PIPGSG+QLTNI+HVRDLSSMLT AV P+ A NIFN
Sbjct: 241 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 300
Query: 301 CVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEIL 360
CVSDRAVTLDGMAKLCA AAG+ V IVHYDPK +GVDAKKAF FRNMHFYAEPRAA+++L
Sbjct: 301 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLL 360
Query: 361 GWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 404
GW+S TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 361 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPVAA 406
BLAST of CmaCh19G000400 vs. Swiss-Prot
Match:
CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 1.2e-49
Identity = 119/332 (35.84%), Postives = 177/332 (53.31%), Query Frame = 1
Query: 72 SSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEI 131
S++ +K +LI+ GG IG + ++ L+ GH+VT+ T G+ S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRGK--SPIAKQLPGESDQDF 108
Query: 132 VSAGGKTVW--GDPAEVGKVVAGAS---FDVVLDNNGKDIDSVRPVIDWAKSSGVKQFLF 191
K + GD + V + S FDVV D NG++ + V P+++ ++Q+++
Sbjct: 109 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 168
Query: 192 ISSAGIYKPTDEPPHVEGDTVKADAGHVG---VEQYIAEVFSSWAVFRPQYMIGSGNNKD 251
SSAG+Y +D PH E D V + H G E + +W RP Y+ G N
Sbjct: 169 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 228
Query: 252 CEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCVSDRAV 311
EEWFF R+ RPIP+P SG+Q++ + HV+DL++ L V ++A IFN ++ V
Sbjct: 229 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 288
Query: 312 TLDGMAKLCAQAAGRPV-NIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSST 371
T DG+AK CA+A G P IVHY+PK KKAFPFR+ HF+A A+ +LGWK
Sbjct: 289 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 348
Query: 372 NLPEDLKERFEEYVKIGRDKKAIKFELDDKIL 395
+L E L + + G +K F DD IL
Sbjct: 349 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
BLAST of CmaCh19G000400 vs. TrEMBL
Match:
A0A0A0KE82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408170 PE=4 SV=1)
HSP 1 Score: 694.5 bits (1791), Expect = 7.6e-197
Identity = 358/410 (87.32%), Postives = 375/410 (91.46%), Query Frame = 1
Query: 1 MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHS-----FLPF 60
MAAL SSS LF+SKPSI+ PSS+SP S+SPIS+ S ++SSF+ISHS + F
Sbjct: 1 MAALPFSSS-LFSSKPSIYFPSSISPSFPHPSLSPISNSSPISSSFSISHSNFLSNYSSF 60
Query: 61 PSSS--RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVG 120
SSS R S V SFSVRASS+ KK VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVG
Sbjct: 61 SSSSSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVG 120
Query: 121 EESSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVI 180
E+SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKVV GASFDVVLDNNGKDID+VRPVI
Sbjct: 121 EQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVI 180
Query: 181 DWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQ 240
DWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVE+YIAEVFSSWAVFRPQ
Sbjct: 181 DWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQ 240
Query: 241 YMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHAN 300
YMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAH+N
Sbjct: 241 YMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSN 300
Query: 301 IFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQ 360
IFNCVS RAVTLDGMAKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQ
Sbjct: 301 IFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ 360
Query: 361 EILGWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 404
EILGW+ +TNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 361 EILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPVAA 409
BLAST of CmaCh19G000400 vs. TrEMBL
Match:
A0A0D2R0Y2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080000 PE=4 SV=1)
HSP 1 Score: 653.7 bits (1685), Expect = 1.5e-184
Identity = 331/404 (81.93%), Postives = 362/404 (89.60%), Query Frame = 1
Query: 1 MAALASSSSS--LFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHSFLPFPSS 60
MAALASSSSS LF+S P+ SL P L S + S L+SS ++S SF +P+S
Sbjct: 1 MAALASSSSSSLLFSSPPTKFPSPSLCPPLRLSLPT-----SFLSSSLSLSPSFHAYPTS 60
Query: 61 SRRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSD 120
SRR + SF++RAS+A+KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTI TVGEE SD
Sbjct: 61 SRRYSASSFTIRASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTIFTVGEEGSD 120
Query: 121 KMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWAKS 180
KMKKPPFNRFSEI SAGGKTVWGDPA+VGKVVAGA+FDVVLDNNGKD+D+VRPV+DWAKS
Sbjct: 121 KMKKPPFNRFSEITSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVVDWAKS 180
Query: 181 SGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMIGS 240
SGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWAVFRPQYMIGS
Sbjct: 181 SGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYVAEVFSSWAVFRPQYMIGS 240
Query: 241 GNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCV 300
GNNKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A NIFNCV
Sbjct: 241 GNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAACCNIFNCV 300
Query: 301 SDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGW 360
SDRAVTLDGMAKLCA AAG PV IVHYDPK +G+DAKKAFPFRNMHFYAEPRAA++ILGW
Sbjct: 301 SDRAVTLDGMAKLCAAAAGLPVEIVHYDPKAIGIDAKKAFPFRNMHFYAEPRAAKDILGW 360
Query: 361 KSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 403
KS+TNLPEDLKERFEEYVKIGRDKK ++FE+DDKIL SLKVPVA
Sbjct: 361 KSTTNLPEDLKERFEEYVKIGRDKKPMQFEMDDKILGSLKVPVA 399
BLAST of CmaCh19G000400 vs. TrEMBL
Match:
A0A061DQU5_THECC (Chloroplast stem-loop binding protein of 41 kDa isoform 1 OS=Theobroma cacao GN=TCM_004387 PE=4 SV=1)
HSP 1 Score: 651.7 bits (1680), Expect = 5.7e-184
Identity = 326/402 (81.09%), Postives = 359/402 (89.30%), Query Frame = 1
Query: 1 MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHSFLPFPSSSR 60
MAALASSSSSL S P LPS P L +S+ S L+SS +IS SF +P+SSR
Sbjct: 1 MAALASSSSSLLFSSPPSKLPS---PSLYPLPRLSLSTSSFLSSSLSISPSFFAYPTSSR 60
Query: 61 RSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKM 120
R + SF+V+AS +KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVG+E SDKM
Sbjct: 61 RYSPSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKM 120
Query: 121 KKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWAKSSG 180
KKPPFNRFSEIVSAGGKTVWGDPA+VGKVVAGA+FDVVLDNNGKD+D+VRPVIDWAKSSG
Sbjct: 121 KKPPFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVIDWAKSSG 180
Query: 181 VKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMIGSGN 240
V QFL+ISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIAE+FSSWA+FRPQYMIGSGN
Sbjct: 181 VDQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGN 240
Query: 241 NKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCVSD 300
NKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A +NIFNCVSD
Sbjct: 241 NKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNIFNCVSD 300
Query: 301 RAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGWKS 360
RAVTLDGMA+LCA+AAG PV I HYDPK VG+DAKKAFPFRNMHFY+EPRAA++ILGW
Sbjct: 301 RAVTLDGMARLCAEAAGLPVEIAHYDPKAVGIDAKKAFPFRNMHFYSEPRAAKDILGWNG 360
Query: 361 STNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 403
+TNLPEDLKERFEEYVKIGRDK+ ++FELDDKILESLKV VA
Sbjct: 361 TTNLPEDLKERFEEYVKIGRDKEPMQFELDDKILESLKVAVA 399
BLAST of CmaCh19G000400 vs. TrEMBL
Match:
M5VVY7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006606mg PE=4 SV=1)
HSP 1 Score: 647.9 bits (1670), Expect = 8.2e-183
Identity = 321/403 (79.65%), Postives = 363/403 (90.07%), Query Frame = 1
Query: 1 MAALASSSSS-LFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHSFLPFPSSS 60
MA L SSSSS LF+S S +P SLS L R S+S S S L+SS +ISHS + +P+ S
Sbjct: 1 MATLTSSSSSVLFSSTHSNLVPPSLSH-LPRLSLSSSSHFSTLSSSLSISHSSVAYPAIS 60
Query: 61 RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDK 120
RR N CSFS++AS+ +KK VLIVNTN GGHAVIGFYFAK+LLGSGH+VT+LTVGEESSDK
Sbjct: 61 RRFNRCSFSIKASAGEKKKVLIVNTNGGGHAVIGFYFAKELLGSGHQVTVLTVGEESSDK 120
Query: 121 MKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWAKSS 180
MKKPPF+RFSEIVSAGGKTVWG+PA++GK++ G +FDVVL+NNGKD+D+VRPV DWAKSS
Sbjct: 121 MKKPPFSRFSEIVSAGGKTVWGEPADIGKILEGTAFDVVLENNGKDLDTVRPVADWAKSS 180
Query: 181 GVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMIGSG 240
GVKQFL+ISSAGIYKPT+EPPHVEGD VKADA HV VE+YIAE+F SWA+FRPQYM+GSG
Sbjct: 181 GVKQFLYISSAGIYKPTEEPPHVEGDVVKADASHVAVEKYIAEIFGSWAIFRPQYMLGSG 240
Query: 241 NNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCVS 300
NNKDCEEWFFDRI+RDRP+PIPGSG+QLTNI+HVRDLSSMLTLAVE PD A +NIFNCVS
Sbjct: 241 NNKDCEEWFFDRILRDRPVPIPGSGLQLTNISHVRDLSSMLTLAVENPDAASSNIFNCVS 300
Query: 301 DRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGWK 360
DRAVTLDG+AKLCAQAAGRPVNIVHYDPK GVDAKKAFPFRNMHFYAEPRAA+E+LGWK
Sbjct: 301 DRAVTLDGLAKLCAQAAGRPVNIVHYDPKAAGVDAKKAFPFRNMHFYAEPRAAKEVLGWK 360
Query: 361 SSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 403
S+TNL EDLKERFEEY+KIGRDKK IKFELDDKI+ESLKVPVA
Sbjct: 361 STTNLTEDLKERFEEYLKIGRDKKTIKFELDDKIIESLKVPVA 402
BLAST of CmaCh19G000400 vs. TrEMBL
Match:
A0A0B0PFR6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28570 PE=4 SV=1)
HSP 1 Score: 646.0 bits (1665), Expect = 3.1e-182
Identity = 327/404 (80.94%), Postives = 360/404 (89.11%), Query Frame = 1
Query: 1 MAALASSSSS--LFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHSFLPFPSS 60
MAA ASSSSS LF+S P+ SL P L S + + S L+SS ++S S +P+S
Sbjct: 1 MAAFASSSSSSLLFSSPPTKFPSPSLYPPLRLS----LPTSSFLSSSLSLSPSSHAYPTS 60
Query: 61 SRRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSD 120
SRR + SF++RAS+A+KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTI TVGEE SD
Sbjct: 61 SRRYSASSFTIRASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTIFTVGEEGSD 120
Query: 121 KMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWAKS 180
KMKKPPFNRFSEI SAGGKTVWGDPA+VGKVVAGA+FDVVLDNNGKD+D+VRPV+DWAKS
Sbjct: 121 KMKKPPFNRFSEITSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVVDWAKS 180
Query: 181 SGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMIGS 240
SGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWAVFRPQYMIGS
Sbjct: 181 SGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYVAEVFSSWAVFRPQYMIGS 240
Query: 241 GNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCV 300
GNNKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHV DLSSMLTLAVEKP+ A NIFNCV
Sbjct: 241 GNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVWDLSSMLTLAVEKPEAACCNIFNCV 300
Query: 301 SDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGW 360
SDRAVTLDGMAKLCA AAG PV IVHYDPK +G+DAKKAFPFRN+HFYAEPRAA++ILGW
Sbjct: 301 SDRAVTLDGMAKLCAAAAGLPVEIVHYDPKAIGIDAKKAFPFRNVHFYAEPRAAKDILGW 360
Query: 361 KSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 403
KS+TNLPEDLKERFEEYVKIGRDKK ++FE+DDKIL SLKVPVA
Sbjct: 361 KSTTNLPEDLKERFEEYVKIGRDKKPMQFEMDDKILGSLKVPVA 400
BLAST of CmaCh19G000400 vs. TAIR10
Match:
AT3G63140.1 (AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa)
HSP 1 Score: 592.0 bits (1525), Expect = 2.7e-169
Identity = 307/407 (75.43%), Postives = 344/407 (84.52%), Query Frame = 1
Query: 1 MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPS--ALTSSFAISHSFLPFP-S 60
MAAL SSSS F+SK + + + L P L P SS S +L+SS + S S L F
Sbjct: 1 MAAL-SSSSLFFSSKTTSPISNLLIPPSLHRFSLPSSSSSFSSLSSSSSSSSSLLTFSLR 60
Query: 61 SSRRSNVCSFSVRASSA-DKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEES 120
+SRR + F+V+ASS +KKNVLIVNTNSGGHAVIGFYFAK+LL +GH VTILTVG+ES
Sbjct: 61 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 120
Query: 121 SDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWA 180
S+KMKKPPFNRFSEIVS GGKTVWG+PA V VV G +FDVVLDNNGKD+D+VRPV+DWA
Sbjct: 121 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 180
Query: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMI 240
KSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VE+Y+AE F +WA FRPQYMI
Sbjct: 181 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 240
Query: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFN 300
GSGNNKDCEEWFFDRIVRDR +PIPGSG+QLTNI+HVRDLSSMLT AV P+ A NIFN
Sbjct: 241 GSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFN 300
Query: 301 CVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEIL 360
CVSDRAVTLDGMAKLCA AAG+ V IVHYDPK +GVDAKKAF FRNMHFYAEPRAA+++L
Sbjct: 301 CVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLL 360
Query: 361 GWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 404
GW+S TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 361 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPVAA 406
BLAST of CmaCh19G000400 vs. TAIR10
Match:
AT1G09340.1 (AT1G09340.1 chloroplast RNA binding)
HSP 1 Score: 198.7 bits (504), Expect = 6.6e-51
Identity = 119/332 (35.84%), Postives = 177/332 (53.31%), Query Frame = 1
Query: 72 SSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKMKKPPFNRFSEI 131
S++ +K +LI+ GG IG + ++ L+ GH+VT+ T G+ S K+ P +
Sbjct: 49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRGK--SPIAKQLPGESDQDF 108
Query: 132 VSAGGKTVW--GDPAEVGKVVAGAS---FDVVLDNNGKDIDSVRPVIDWAKSSGVKQFLF 191
K + GD + V + S FDVV D NG++ + V P+++ ++Q+++
Sbjct: 109 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 168
Query: 192 ISSAGIYKPTDEPPHVEGDTVKADAGHVG---VEQYIAEVFSSWAVFRPQYMIGSGNNKD 251
SSAG+Y +D PH E D V + H G E + +W RP Y+ G N
Sbjct: 169 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 228
Query: 252 CEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCVSDRAV 311
EEWFF R+ RPIP+P SG+Q++ + HV+DL++ L V ++A IFN ++ V
Sbjct: 229 VEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYV 288
Query: 312 TLDGMAKLCAQAAGRPV-NIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSST 371
T DG+AK CA+A G P IVHY+PK KKAFPFR+ HF+A A+ +LGWK
Sbjct: 289 TFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEF 348
Query: 372 NLPEDLKERFEEYVKIGRDKKAIKFELDDKIL 395
+L E L + + G +K F DD IL
Sbjct: 349 DLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371
BLAST of CmaCh19G000400 vs. NCBI nr
Match:
gi|659096967|ref|XP_008449375.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis melo])
HSP 1 Score: 702.2 bits (1811), Expect = 5.2e-199
Identity = 359/408 (87.99%), Postives = 379/408 (92.89%), Query Frame = 1
Query: 1 MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHS-FLPFPSSS 60
MAAL SSS LF+SKPSI+ PS +SP S+SPIS+ S ++SSF+ISHS FL SSS
Sbjct: 1 MAALPFSSS-LFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
Query: 61 ----RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEE 120
R S VCSFSVRASS+ KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE+
Sbjct: 61 SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
Query: 121 SSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDW 180
SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKV+ GASFDVVLDNNGKDID+VRPVIDW
Sbjct: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYM 240
AKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWA+FRPQYM
Sbjct: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIF 300
IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAH+NIF
Sbjct: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
Query: 301 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEI 360
NCV+DRAVTLDGMAKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQEI
Sbjct: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
Query: 361 LGWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 404
LGWKS+TNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 407
BLAST of CmaCh19G000400 vs. NCBI nr
Match:
gi|449444637|ref|XP_004140080.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis sativus])
HSP 1 Score: 694.5 bits (1791), Expect = 1.1e-196
Identity = 358/410 (87.32%), Postives = 375/410 (91.46%), Query Frame = 1
Query: 1 MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHS-----FLPF 60
MAAL SSS LF+SKPSI+ PSS+SP S+SPIS+ S ++SSF+ISHS + F
Sbjct: 1 MAALPFSSS-LFSSKPSIYFPSSISPSFPHPSLSPISNSSPISSSFSISHSNFLSNYSSF 60
Query: 61 PSSS--RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVG 120
SSS R S V SFSVRASS+ KK VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVG
Sbjct: 61 SSSSSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVG 120
Query: 121 EESSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVI 180
E+SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKVV GASFDVVLDNNGKDID+VRPVI
Sbjct: 121 EQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVI 180
Query: 181 DWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQ 240
DWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVE+YIAEVFSSWAVFRPQ
Sbjct: 181 DWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQ 240
Query: 241 YMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHAN 300
YMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAH+N
Sbjct: 241 YMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSN 300
Query: 301 IFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQ 360
IFNCVS RAVTLDGMAKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQ
Sbjct: 301 IFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQ 360
Query: 361 EILGWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 404
EILGW+ +TNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 361 EILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPVAA 409
BLAST of CmaCh19G000400 vs. NCBI nr
Match:
gi|823148033|ref|XP_012473925.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Gossypium raimondii])
HSP 1 Score: 653.7 bits (1685), Expect = 2.1e-184
Identity = 331/404 (81.93%), Postives = 362/404 (89.60%), Query Frame = 1
Query: 1 MAALASSSSS--LFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHSFLPFPSS 60
MAALASSSSS LF+S P+ SL P L S + S L+SS ++S SF +P+S
Sbjct: 1 MAALASSSSSSLLFSSPPTKFPSPSLCPPLRLSLPT-----SFLSSSLSLSPSFHAYPTS 60
Query: 61 SRRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSD 120
SRR + SF++RAS+A+KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTI TVGEE SD
Sbjct: 61 SRRYSASSFTIRASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTIFTVGEEGSD 120
Query: 121 KMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWAKS 180
KMKKPPFNRFSEI SAGGKTVWGDPA+VGKVVAGA+FDVVLDNNGKD+D+VRPV+DWAKS
Sbjct: 121 KMKKPPFNRFSEITSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVVDWAKS 180
Query: 181 SGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMIGS 240
SGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWAVFRPQYMIGS
Sbjct: 181 SGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYVAEVFSSWAVFRPQYMIGS 240
Query: 241 GNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCV 300
GNNKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A NIFNCV
Sbjct: 241 GNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAACCNIFNCV 300
Query: 301 SDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGW 360
SDRAVTLDGMAKLCA AAG PV IVHYDPK +G+DAKKAFPFRNMHFYAEPRAA++ILGW
Sbjct: 301 SDRAVTLDGMAKLCAAAAGLPVEIVHYDPKAIGIDAKKAFPFRNMHFYAEPRAAKDILGW 360
Query: 361 KSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 403
KS+TNLPEDLKERFEEYVKIGRDKK ++FE+DDKIL SLKVPVA
Sbjct: 361 KSTTNLPEDLKERFEEYVKIGRDKKPMQFEMDDKILGSLKVPVA 399
BLAST of CmaCh19G000400 vs. NCBI nr
Match:
gi|470108717|ref|XP_004290655.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Fragaria vesca subsp. vesca])
HSP 1 Score: 652.5 bits (1682), Expect = 4.8e-184
Identity = 332/405 (81.98%), Postives = 364/405 (89.88%), Query Frame = 1
Query: 1 MAALASSSSS--LFTSKPSIHLPSSLSPCLLR-SSVSPISSPSALTSSFAISHSFLPFPS 60
MA LASSSSS LF+S S P SLSP L SS S IS+ L+SS ++SHSF+ +P+
Sbjct: 1 MATLASSSSSSVLFSSPHSNLTPPSLSPSRLSFSSSSHIST--TLSSSLSVSHSFVTYPT 60
Query: 61 SSRRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESS 120
+SRR + CSFSV+A +ADKK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGEESS
Sbjct: 61 TSRRFSPCSFSVKAIAADKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESS 120
Query: 121 DKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWAK 180
DKMKK PF RFSEIV AGGKTVWG+PAE+ KV+ G++FDVVLDNNGKD+D+V+PV DWAK
Sbjct: 121 DKMKKTPFTRFSEIVGAGGKTVWGEPAEIAKVLEGSAFDVVLDNNGKDLDAVKPVADWAK 180
Query: 181 SSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMIG 240
SSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHV VE+Y+AEVFSSWA FRPQYMIG
Sbjct: 181 SSGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVAVEKYMAEVFSSWASFRPQYMIG 240
Query: 241 SGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNC 300
SGNNKDCEEWFFDRIVRDRP+PIPGSGMQLT I+HVRDLSSMLTLAVEKPD A NIFNC
Sbjct: 241 SGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTVISHVRDLSSMLTLAVEKPDAASGNIFNC 300
Query: 301 VSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILG 360
VSDRAVTLDG+AKLCAQAAGRPVNIVHY+PK GVDAKKAFPFRNMHFYAEPRAA++ILG
Sbjct: 301 VSDRAVTLDGLAKLCAQAAGRPVNIVHYEPKAAGVDAKKAFPFRNMHFYAEPRAAKDILG 360
Query: 361 WKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 403
WKS+TNL EDLKERFEEY+KIGRDKKAIKF+LDDKILESLK PVA
Sbjct: 361 WKSTTNLSEDLKERFEEYLKIGRDKKAIKFDLDDKILESLKAPVA 403
BLAST of CmaCh19G000400 vs. NCBI nr
Match:
gi|590717461|ref|XP_007050620.1| (Chloroplast stem-loop binding protein of 41 kDa isoform 1 [Theobroma cacao])
HSP 1 Score: 651.7 bits (1680), Expect = 8.1e-184
Identity = 326/402 (81.09%), Postives = 359/402 (89.30%), Query Frame = 1
Query: 1 MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHSFLPFPSSSR 60
MAALASSSSSL S P LPS P L +S+ S L+SS +IS SF +P+SSR
Sbjct: 1 MAALASSSSSLLFSSPPSKLPS---PSLYPLPRLSLSTSSFLSSSLSISPSFFAYPTSSR 60
Query: 61 RSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEESSDKM 120
R + SF+V+AS +KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVG+E SDKM
Sbjct: 61 RYSPSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGDEGSDKM 120
Query: 121 KKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDWAKSSG 180
KKPPFNRFSEIVSAGGKTVWGDPA+VGKVVAGA+FDVVLDNNGKD+D+VRPVIDWAKSSG
Sbjct: 121 KKPPFNRFSEIVSAGGKTVWGDPADVGKVVAGATFDVVLDNNGKDLDTVRPVIDWAKSSG 180
Query: 181 VKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYMIGSGN 240
V QFL+ISSAGIYKPTDEPPHVEGD VKADAGHVGVE+YIAE+FSSWA+FRPQYMIGSGN
Sbjct: 181 VDQFLYISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGN 240
Query: 241 NKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIFNCVSD 300
NKDCEEWFFDRIVR RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A +NIFNCVSD
Sbjct: 241 NKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAASSNIFNCVSD 300
Query: 301 RAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEILGWKS 360
RAVTLDGMA+LCA+AAG PV I HYDPK VG+DAKKAFPFRNMHFY+EPRAA++ILGW
Sbjct: 301 RAVTLDGMARLCAEAAGLPVEIAHYDPKAVGIDAKKAFPFRNMHFYSEPRAAKDILGWNG 360
Query: 361 STNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVA 403
+TNLPEDLKERFEEYVKIGRDK+ ++FELDDKILESLKV VA
Sbjct: 361 TTNLPEDLKERFEEYVKIGRDKEPMQFELDDKILESLKVAVA 399
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| CP41A_ARATH | 4.8e-168 | 75.43 | Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ... | [more] |
| CP41B_ARATH | 1.2e-49 | 35.84 | Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KE82_CUCSA | 7.6e-197 | 87.32 | Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408170 PE=4 SV=1 | [more] |
| A0A0D2R0Y2_GOSRA | 1.5e-184 | 81.93 | Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080000 PE=4 SV=1 | [more] |
| A0A061DQU5_THECC | 5.7e-184 | 81.09 | Chloroplast stem-loop binding protein of 41 kDa isoform 1 OS=Theobroma cacao GN=... | [more] |
| M5VVY7_PRUPE | 8.2e-183 | 79.65 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006606mg PE=4 SV=1 | [more] |
| A0A0B0PFR6_GOSAR | 3.1e-182 | 80.94 | Uncharacterized protein OS=Gossypium arboreum GN=F383_28570 PE=4 SV=1 | [more] |
