MU49313 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU49313
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	NAD dependent epimerase/dehydratase, putative
Location	chr5 : 3566978 .. 3568245 (-)
Sequence length	919

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGATCTTGTTAAAGCTGACGCTGGCCATGTTGGTGTTGAGAAATATATGGCGGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAATACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGACAGAATTGTCCGGGACAGACCGATTCCAATTCCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGCGTAACCGATCGAGCAGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTTGTCCTGTTAACATAGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTTAGGGTGGAAAAGCACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAAGCTATTAAGTTTGAATTAGATGATAAGATACTTGAGTCCTTAAAAGTTCCAGTAGCTGCTTAACCCTCCGGATAATTGTGCAAAACATAGCACTCCAAATCTTACAGTACTTTTGTATATGTATTCTCATTTATTGTACTTCTATCAACTTACCAAAATAAAATGATTTTGAGAGCTGAAGTTTGTTCCCTCATTTCTTATTTTTTGTATTTATAGAAGAAACCAAAGAAAGTAGTATAGATTGCATATATTCCCAGGCTCTCTAGCTCTCTACCAAACAAATGTGGATAATGTACCGGCAGTTCTAATTCATTTCTGGTAAAATATATCAAAGTAAACATTGCACTCT

Library


Library category	ESTs
melon CI library	1
melon HS library	1

Homology

[Close]

BLAST of MU49313 vs. Swiss-Prot
Match: CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.1e-99
Identity = 174/210 (82.86%), Postives = 187/210 (89.05%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           K T++PPHVEGD VKADAGHV VEKY+AE F +WA FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 197 KSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIV 256

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           RDR +PIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  NIFNCV+DRAVTLDGMAKLCA
Sbjct: 257 RDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCA 316

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
            AAG  V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA+++LGW+S TNLPEDLKERFE
Sbjct: 317 AAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFE 376

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 377 EYVKIGRDKKEIKFELDDKILEALKTPVAA 406

Query: 241  300
           
Sbjct: 437  406

Query: 301  360
           
Sbjct: 497  406

Query: 361  420
           
Sbjct: 557  406

Query: 421  480
           
Sbjct: 617  406

Query: 481  540
           
Sbjct: 677  406

Query: 541  600
           
Sbjct: 737  406

Query: 601  631
           
Sbjct: 797  406

[Close]

BLAST of MU49313 vs. Swiss-Prot
Match: CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.6e-33
Identity = 81/203 (39.90%), Postives = 108/203 (53.20%), Query Frame = 1


Query: 7   TDEPPHVEGDLVKADAGHVG---VEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRI 66
           +D  PH E D V   + H G    E  +     +W   RP Y+ G  N    EEWFF R+
Sbjct: 170 SDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRL 229

Query: 67  VRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLC 126
              RPIP+P SG+Q++ + HV+DL++   L V   ++A   IFN   ++ VT DG+AK C
Sbjct: 230 KAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYVTFDGLAKAC 289

Query: 127 AQAAGCPV-NIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKER 186
           A+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK   +L E L + 
Sbjct: 290 AKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDS 349

Query: 187 FEEYVKIGRDKKAIKFELDDKIL 246
           +      G  +K   F  DD IL
Sbjct: 350 YNLDFGRGTFRKEADFTTDDMIL 371

Query: 247  306
           
Sbjct: 410  371

Query: 307  366
           
Sbjct: 470  371

Query: 367  426
           
Sbjct: 530  371

Query: 427  486
           
Sbjct: 590  371

Query: 487  546
           
Sbjct: 650  371

Query: 547  604
           
Sbjct: 710  371

[Close]

BLAST of MU49313 vs. TrEMBL
Match: A0A0A0KE82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408170 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.7e-112
Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           K TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 200 KTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIV 259

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCV+ RAVTLDGMAKLCA
Sbjct: 260 RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCA 319

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGW+ TTNLPEDLKERFE
Sbjct: 320 QAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDLKERFE 379

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 380 EYVKIGRDKKAIKFELDDKILESLNVPVAA 409

Query: 241  300
           
Sbjct: 440  409

Query: 301  360
           
Sbjct: 500  409

Query: 361  420
           
Sbjct: 560  409

Query: 421  480
           
Sbjct: 620  409

Query: 481  540
           
Sbjct: 680  409

Query: 541  600
           
Sbjct: 740  409

Query: 601  631
           
Sbjct: 800  409

[Close]

BLAST of MU49313 vs. TrEMBL
Match: W9QVM5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025068 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 7.2e-107
Identity = 185/210 (88.10%), Postives = 203/210 (96.67%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGD+VKADAGHVGVEKY+AEVFSSWA FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 199 KPTDEPPHVEGDVVKADAGHVGVEKYIAEVFSSWAAFRPQYMIGSGNNKDCEEWFFDRIV 258

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           RDRP+PIPGSG+QLTNI+HV+DLSSML+LAVEKP+ A+ NIFNCV+DR VTLDG+AKLCA
Sbjct: 259 RDRPVPIPGSGLQLTNISHVKDLSSMLSLAVEKPEAANGNIFNCVSDRTVTLDGIAKLCA 318

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PVN+VHYDPKAVG+DAKKAFPFRNMHFYAEPRAA++ILGW+ TTNLPEDLKERFE
Sbjct: 319 QAAGRPVNVVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDILGWQGTTNLPEDLKERFE 378

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKK IKFELDDKIL++LKVPVAA
Sbjct: 379 EYVKIGRDKKDIKFELDDKILDALKVPVAA 408

Query: 241  300
           
Sbjct: 439  408

Query: 301  360
           
Sbjct: 499  408

Query: 361  420
           
Sbjct: 559  408

Query: 421  480
           
Sbjct: 619  408

Query: 481  540
           
Sbjct: 679  408

Query: 541  600
           
Sbjct: 739  408

Query: 601  631
           
Sbjct: 799  408

[Close]

BLAST of MU49313 vs. TrEMBL
Match: B9H883_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23110g PE=4 SV=2)

HSP 1 Score: 395.2 bits (1014), Expect = 7.2e-107
Identity = 186/210 (88.57%), Postives = 201/210 (95.71%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGD+VKADAGHVGVEKY+AE+FSSWAIFRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 228 KPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 287

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           R RP+PIPGSGMQLTNIAHVRDLSSMLTLAVE P+ A  NIFNCV+DRAVTLDGMAKLCA
Sbjct: 288 RKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGNIFNCVSDRAVTLDGMAKLCA 347

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PV I+HYDPKAVG+DAKKAFPFRNMHFYAEPRAA++ILGW+ TTNLPEDLKERF+
Sbjct: 348 QAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDILGWQGTTNLPEDLKERFD 407

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKK ++FE+DDKILESLKVPVAA
Sbjct: 408 EYVKIGRDKKPMQFEIDDKILESLKVPVAA 437

Query: 241  300
           
Sbjct: 468  437

Query: 301  360
           
Sbjct: 528  437

Query: 361  420
           
Sbjct: 588  437

Query: 421  480
           
Sbjct: 648  437

Query: 481  540
           
Sbjct: 708  437

Query: 541  600
           
Sbjct: 768  437

Query: 601  631
           
Sbjct: 828  437

[Close]

BLAST of MU49313 vs. TrEMBL
Match: A0A0D2QU21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080000 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.2e-106
Identity = 187/209 (89.47%), Postives = 200/209 (95.69%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGD+VKADAGHVGVEKY+AEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 183 KPTDEPPHVEGDVVKADAGHVGVEKYVAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIV 242

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           R RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A  NIFNCV+DRAVTLDGMAKLCA
Sbjct: 243 RKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAACCNIFNCVSDRAVTLDGMAKLCA 302

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
            AAG PV IVHYDPKA+G+DAKKAFPFRNMHFYAEPRAA++ILGWKSTTNLPEDLKERFE
Sbjct: 303 AAAGLPVEIVHYDPKAIGIDAKKAFPFRNMHFYAEPRAAKDILGWKSTTNLPEDLKERFE 362

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVA 240
           EYVKIGRDKK ++FE+DDKIL SLKVPVA
Sbjct: 363 EYVKIGRDKKPMQFEMDDKILGSLKVPVA 391

Query: 241  300
           
Sbjct: 423  391

Query: 301  360
           
Sbjct: 483  391

Query: 361  420
           
Sbjct: 543  391

Query: 421  480
           
Sbjct: 603  391

Query: 481  540
           
Sbjct: 663  391

Query: 541  600
           
Sbjct: 723  391

Query: 601  628
           
Sbjct: 783  391

[Close]

BLAST of MU49313 vs. TrEMBL
Match: A0A0D2R0Y2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080000 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.2e-106
Identity = 187/209 (89.47%), Postives = 200/209 (95.69%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGD+VKADAGHVGVEKY+AEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 191 KPTDEPPHVEGDVVKADAGHVGVEKYVAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIV 250

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           R RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKP+ A  NIFNCV+DRAVTLDGMAKLCA
Sbjct: 251 RKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPEAACCNIFNCVSDRAVTLDGMAKLCA 310

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
            AAG PV IVHYDPKA+G+DAKKAFPFRNMHFYAEPRAA++ILGWKSTTNLPEDLKERFE
Sbjct: 311 AAAGLPVEIVHYDPKAIGIDAKKAFPFRNMHFYAEPRAAKDILGWKSTTNLPEDLKERFE 370

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVA 240
           EYVKIGRDKK ++FE+DDKIL SLKVPVA
Sbjct: 371 EYVKIGRDKKPMQFEMDDKILGSLKVPVA 399

Query: 241  300
           
Sbjct: 431  399

Query: 301  360
           
Sbjct: 491  399

Query: 361  420
           
Sbjct: 551  399

Query: 421  480
           
Sbjct: 611  399

Query: 481  540
           
Sbjct: 671  399

Query: 541  600
           
Sbjct: 731  399

Query: 601  628
           
Sbjct: 791  399

[Close]

BLAST of MU49313 vs. TAIR10
Match: AT3G63140.1 (AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa)

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-100
Identity = 174/210 (82.86%), Postives = 187/210 (89.05%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           K T++PPHVEGD VKADAGHV VEKY+AE F +WA FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 197 KSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIV 256

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           RDR +PIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  NIFNCV+DRAVTLDGMAKLCA
Sbjct: 257 RDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCA 316

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
            AAG  V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA+++LGW+S TNLPEDLKERFE
Sbjct: 317 AAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFE 376

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 377 EYVKIGRDKKEIKFELDDKILEALKTPVAA 406

Query: 241  300
           
Sbjct: 437  406

Query: 301  360
           
Sbjct: 497  406

Query: 361  420
           
Sbjct: 557  406

Query: 421  480
           
Sbjct: 617  406

Query: 481  540
           
Sbjct: 677  406

Query: 541  600
           
Sbjct: 737  406

Query: 601  631
           
Sbjct: 797  406

[Close]

BLAST of MU49313 vs. TAIR10
Match: AT1G09340.1 (AT1G09340.1 chloroplast RNA binding)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34
Identity = 81/203 (39.90%), Postives = 108/203 (53.20%), Query Frame = 1


Query: 7   TDEPPHVEGDLVKADAGHVG---VEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRI 66
           +D  PH E D V   + H G    E  +     +W   RP Y+ G  N    EEWFF R+
Sbjct: 170 SDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRL 229

Query: 67  VRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLC 126
              RPIP+P SG+Q++ + HV+DL++   L V   ++A   IFN   ++ VT DG+AK C
Sbjct: 230 KAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEKYVTFDGLAKAC 289

Query: 127 AQAAGCPV-NIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKER 186
           A+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK   +L E L + 
Sbjct: 290 AKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDS 349

Query: 187 FEEYVKIGRDKKAIKFELDDKIL 246
           +      G  +K   F  DD IL
Sbjct: 350 YNLDFGRGTFRKEADFTTDDMIL 371

Query: 247  306
           
Sbjct: 410  371

Query: 307  366
           
Sbjct: 470  371

Query: 367  426
           
Sbjct: 530  371

Query: 427  486
           
Sbjct: 590  371

Query: 487  546
           
Sbjct: 650  371

Query: 547  604
           
Sbjct: 710  371

[Close]

BLAST of MU49313 vs. NCBI nr
Match: gi|659096967|ref|XP_008449375.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis melo])

HSP 1 Score: 435.3 bits (1118), Expect = 9.1e-119
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 198 KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 257

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA
Sbjct: 258 RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 317

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE
Sbjct: 318 QAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 377

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 378 EYVKIGRDKKAIKFELDDKILESLKVPVAA 407

Query: 241  300
           
Sbjct: 438  407

Query: 301  360
           
Sbjct: 498  407

Query: 361  420
           
Sbjct: 558  407

Query: 421  480
           
Sbjct: 618  407

Query: 481  540
           
Sbjct: 678  407

Query: 541  600
           
Sbjct: 738  407

Query: 601  631
           
Sbjct: 798  407

[Close]

BLAST of MU49313 vs. NCBI nr
Match: gi|449444637|ref|XP_004140080.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 200/210 (95.24%), Postives = 204/210 (97.14%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           K TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 200 KTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIV 259

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCV+ RAVTLDGMAKLCA
Sbjct: 260 RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCA 319

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGW+ TTNLPEDLKERFE
Sbjct: 320 QAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDLKERFE 379

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 380 EYVKIGRDKKAIKFELDDKILESLNVPVAA 409

Query: 241  300
           
Sbjct: 440  409

Query: 301  360
           
Sbjct: 500  409

Query: 361  420
           
Sbjct: 560  409

Query: 421  480
           
Sbjct: 620  409

Query: 481  540
           
Sbjct: 680  409

Query: 541  600
           
Sbjct: 740  409

Query: 601  631
           
Sbjct: 800  409

[Close]

BLAST of MU49313 vs. NCBI nr
Match: gi|703076706|ref|XP_010090403.1| (hypothetical protein L484_025068 [Morus notabilis])

HSP 1 Score: 401.4 bits (1030), Expect = 1.4e-108
Identity = 185/210 (88.10%), Postives = 203/210 (96.67%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGD+VKADAGHVGVEKY+AEVFSSWA FRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 199 KPTDEPPHVEGDVVKADAGHVGVEKYIAEVFSSWAAFRPQYMIGSGNNKDCEEWFFDRIV 258

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           RDRP+PIPGSG+QLTNI+HV+DLSSML+LAVEKP+ A+ NIFNCV+DR VTLDG+AKLCA
Sbjct: 259 RDRPVPIPGSGLQLTNISHVKDLSSMLSLAVEKPEAANGNIFNCVSDRTVTLDGIAKLCA 318

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PVN+VHYDPKAVG+DAKKAFPFRNMHFYAEPRAA++ILGW+ TTNLPEDLKERFE
Sbjct: 319 QAAGRPVNVVHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDILGWQGTTNLPEDLKERFE 378

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKK IKFELDDKIL++LKVPVAA
Sbjct: 379 EYVKIGRDKKDIKFELDDKILDALKVPVAA 408

Query: 241  300
           
Sbjct: 439  408

Query: 301  360
           
Sbjct: 499  408

Query: 361  420
           
Sbjct: 559  408

Query: 421  480
           
Sbjct: 619  408

Query: 481  540
           
Sbjct: 679  408

Query: 541  600
           
Sbjct: 739  408

Query: 601  631
           
Sbjct: 799  408

[Close]

BLAST of MU49313 vs. NCBI nr
Match: gi|566172819|ref|XP_002306773.2| (hypothetical protein POPTR_0005s23110g [Populus trichocarpa])

HSP 1 Score: 401.4 bits (1030), Expect = 1.4e-108
Identity = 186/210 (88.57%), Postives = 201/210 (95.71%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGD+VKADAGHVGVEKY+AE+FSSWAIFRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 228 KPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 287

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           R RP+PIPGSGMQLTNIAHVRDLSSMLTLAVE P+ A  NIFNCV+DRAVTLDGMAKLCA
Sbjct: 288 RKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGNIFNCVSDRAVTLDGMAKLCA 347

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PV I+HYDPKAVG+DAKKAFPFRNMHFYAEPRAA++ILGW+ TTNLPEDLKERF+
Sbjct: 348 QAAGLPVEIMHYDPKAVGIDAKKAFPFRNMHFYAEPRAAKDILGWQGTTNLPEDLKERFD 407

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKK ++FE+DDKILESLKVPVAA
Sbjct: 408 EYVKIGRDKKPMQFEIDDKILESLKVPVAA 437

Query: 241  300
           
Sbjct: 468  437

Query: 301  360
           
Sbjct: 528  437

Query: 361  420
           
Sbjct: 588  437

Query: 421  480
           
Sbjct: 648  437

Query: 481  540
           
Sbjct: 708  437

Query: 541  600
           
Sbjct: 768  437

Query: 601  631
           
Sbjct: 828  437

[Close]

BLAST of MU49313 vs. NCBI nr
Match: gi|743867401|ref|XP_011032719.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Populus euphratica])

HSP 1 Score: 401.0 bits (1029), Expect = 1.9e-108
Identity = 186/210 (88.57%), Postives = 200/210 (95.24%), Query Frame = 1


Query: 1   KPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 60
           KPTDEPPHVEGD+VKADAGHVGVEKY+AE+FSSWAIFRPQYMIGSGNNKDCEEWFFDRIV
Sbjct: 194 KPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQYMIGSGNNKDCEEWFFDRIV 253

Query: 61  RDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCA 120
           R RP+PIPGSGMQLTNIAHVRDLSSMLTLAVE P+ A  NIFNCV+DRAVTLDGMAKLCA
Sbjct: 254 RKRPVPIPGSGMQLTNIAHVRDLSSMLTLAVENPEAASGNIFNCVSDRAVTLDGMAKLCA 313

Query: 121 QAAGCPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFE 180
           QAAG PV IVHYDPK VG+DAKKAFPFRNMHFYAEPRAA++ILGW+ TTNLPEDLKERF+
Sbjct: 314 QAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHFYAEPRAAKDILGWQGTTNLPEDLKERFD 373

Query: 181 EYVKIGRDKKAIKFELDDKILESLKVPVAA 240
           EYVKIGRDKK ++FE+DDKILESLKVPVAA
Sbjct: 374 EYVKIGRDKKPMQFEIDDKILESLKVPVAA 403

Query: 241  300
           
Sbjct: 434  403

Query: 301  360
           
Sbjct: 494  403

Query: 361  420
           
Sbjct: 554  403

Query: 421  480
           
Sbjct: 614  403

Query: 481  540
           
Sbjct: 674  403

Query: 541  600
           
Sbjct: 734  403

Query: 601  631
           
Sbjct: 794  403

The following BLAST results are available for this feature:

BLAST of MU49313 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CP41A_ARATH	2.1e-99	82.86	Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ...	[more]
CP41B_ARATH	2.6e-33	39.90	Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ...	[more]

BLAST of MU49313 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE82_CUCSA	5.7e-112	95.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408170 PE=4 SV=1	[more]
W9QVM5_9ROSA	7.2e-107	88.10	Uncharacterized protein OS=Morus notabilis GN=L484_025068 PE=4 SV=1	[more]
B9H883_POPTR	7.2e-107	88.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23110g PE=4 SV=2	[more]
A0A0D2QU21_GOSRA	1.2e-106	89.47	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080000 PE=4 SV=1	[more]
A0A0D2R0Y2_GOSRA	1.2e-106	89.47	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G080000 PE=4 SV=1	[more]

BLAST of MU49313 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63140.1	1.2e-100	82.86	chloroplast stem-loop binding protein of 41 kDa	[more]
AT1G09340.1	1.5e-34	39.90	chloroplast RNA binding	[more]

BLAST of MU49313 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096967\|ref\|XP_008449375.1\|	9.1e-119	99.52	PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cuc...	[more]
gi\|449444637\|ref\|XP_004140080.1\|	1.1e-113	95.24	PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cuc...	[more]
gi\|703076706\|ref\|XP_010090403.1\|	1.4e-108	88.10	hypothetical protein L484_025068 [Morus notabilis]	[more]
gi\|566172819\|ref\|XP_002306773.2\|	1.4e-108	88.57	hypothetical protein POPTR_0005s23110g [Populus trichocarpa]	[more]
gi\|743867401\|ref\|XP_011032719.1\|	1.9e-108	88.57	PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C014337	MELO3C014337	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
CI62C07	CI62C07	EST
HS22C07	HS22C07	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 26..177 score: 1.0
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 18..187 score: 3.61
None	No IPR available	PANTHER	PTHR10366	NAD DEPENDENT EPIMERASE/DEHYDRATASE	coord: 3..205 score: 1.3E
None	No IPR available	PANTHER	PTHR10366:SF278	CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC	coord: 3..205 score: 1.3E